Random Forest approach to determining climate pathway
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Many studies have shown that RR Lyrae variable stars (RRL) are powerful stellar tracers of Galactic halo structure and satellite galaxies. The Dark Energy Survey (DES), with its deep and wide coverage (g ~ 23.5 mag in a single exposure; over 5000 deg2) provides a rich opportunity to search for substructures out to the edge of the Milky Way halo. However, the sparse and unevenly sampled multiband light curves from the DES wide-field survey (a median of four observations in each of grizY over the first three years) pose a challenge for traditional techniques used to detect RRL. We present an empirically motivated and computationally efficient template-fitting method to identify these variable stars using three years of DES data. When tested on DES light curves of previously classified objects in SDSS stripe 82, our algorithm recovers 89% of RRL periods to within 1% of their true value with 85% purity and 76% completeness. Using this method, we identify 5783 RRL candidates, ~28% of which are previously undiscovered. This method will be useful for identifying RRL in other sparse multiband data sets.
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All-solid-state structural lithium-ion batteries are sought to enable all-electric propulsion in next generation aerospace concepts through improved safety and systems level weight savings. In this work, the influence of processing conditions on microstructural evolution was evaluated for anode composites of strain-free Li4Ti5O12 and metallic nickel current collector. Beyond size distributions, this study explored methods of quantifying microstructural features that describe changes in the spatial distribution and coalescence of nickel particles as a function of sample composition and sintering conditions. Processing-microstructure-property relationships were described by microstructure quantifiers including nickel particle count per area, nearest neighbor distance distribution, and edge-to-edge distance distribution. Machine learning methods were applied to compare the relative influence of processing conditions and microstructural features on electrical conductivity and mechanical strength to optimize for simultaneous energy storage and load bearing performance. Insights gained from this work inform future evaluation of alternative energy storage materials and microstructures for multifunctional performance, and generation of microstructural descriptors strengthens modeling across length scales.
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Reproductive toxicity is one of the prominent endpoints in the risk assessment of environmental and industrial chemicals. Due to the complexity of the reproductive system, traditional reproductive toxicity testing in animals, especially guideline multigeneration reproductive toxicity studies, take a long time and are expensive. Therefore, machine learning, as a promising alternative approach, should be considered when evaluating the reproductive toxicity of chemicals. We curated rat multigeneration reproductive toxicity testing data of 275 chemicals from ToxRefDB (Toxicity Reference Database) and developed predictive models using seven machine learning algorithms (decision tree, decision forest, random forest, k-nearest neighbors, support vector machine, linear discriminant analysis, and logistic regression). A consensus model was built based on the seven individual models. An external validation set was curated from the COSMOS database and the literature. The performances of individual and consensus models were evaluated using 500 iterations of 5-fold cross-validations and the external validation data set. The balanced accuracy of the models ranged from 58% to 65% in the 5-fold cross-validations and 45%–61% in the external validations. Prediction confidence analysis was conducted to provide additional information for more appropriate applications of the developed models. The impact of our findings is in increasing confidence in machine learning models. We demonstrate the importance of using consensus models for harnessing the benefits of multiple machine learning models (i.e., using redundant systems to check validity of outcomes). While we continue to build upon the models to better characterize weak toxicants, there is current utility in saving resources by being able to screen out strong reproductive toxicants before investing in vivo testing. The modeling approach (machine learning models) is offered for assessing the rat multigeneration reproductive toxicity of chemicals. Our results suggest that machine learning may be a promising alternative approach to evaluate the potential reproductive toxicity of chemicals.
This study evaluates the ability of machine learning algorithms to classify tropical depressions (TDs) and tropical storms (TSs) in the western region of the southwest Pacific Ocean (SWPO). Decision rules are generated to predict the environment required for a depression to fully develop into a mature storm, and the most influential predictors in the classification decision are ranked. TD and TS are discriminated based on a maximum sustained wind speed threshold (≥17 ms -1 ). Various aerosol, thermodynamic, and dynamic parameters are extracted closest to the initiation point of each non-developing and developing sample. The covariates associated with each labelled sample are used to train a decision tree and random forest model. Results using a testing dataset suggest the random forest approach more accurately distinguishes between non-developing and developing samples. The classification accuracy of the decision tree and random forest are 72% and 91%, respectively. Random forest outperformed the decision tree by providing higher accuracy in test data. The most important variables for binary classification are sea salt aerosol optical depth (AOD), 1,000 mb relative humidity, and sea surface temperature. AOD is a quantitative estimate of the aerosols presents in the air through the extinction of a ray of light as it passes through the atmosphere. Mean composite maps constructed in an unsupervised manner have been created for the most important variables identified by the random forest classifier during TD and TS events to highlight the difference in geophysical and aerosol variables' climatology during the two different classifications. This work will advance the risk management strategies for northeastern Australia and other SWPO basin islands to control their tropical cyclone related losses through prioritizing forecasting variables that are the strongest predictors of the strengthening of tropical depressions into tropical cyclones.
M dwarfs are the most abundant stars in the Solar Neighborhood and they are prime targets for searching for rocky planets in habitable zones. Consequently, a detailed characterization of these stars is in demand. The spectral sub-type is one of the parameters that is used for the characterization and it is traditionally derived from the observed spectra. However, obtaining the spectra of M dwarfs is expensive in terms of observation time and resources due to their intrinsic faintness. We study the performance of four machine-learning (ML) models—K-Nearest Neighbor (KNN), Random Forest (RF), Probabilistic Random Forest (PRF), and Multilayer Perceptron (MLP)—in identifying the spectral sub-types of M dwarfs at a grand scale by deploying broadband photometry in the optical and near-infrared. We trained the ML models by using the spectroscopically identified M dwarfs from the Sloan Digital Sky Survey (SDSS) Data Release (DR) 7, together with their photometric colors that were derived from the SDSS, Two-Micron All-Sky Survey, and Wide-field Infrared Survey Explorer. We found that the RF, PRF, and MLP give a comparable prediction accuracy, 74%, while the KNN provides slightly lower accuracy, 71%. We also found that these models can predict the spectral sub-type of M dwarfs with ~99% accuracy within ±1 sub-type. The five most useful features for the prediction are r - z, r - i, r - J, r - H , and g - z, and hence lacking data in all SDSS bands substantially reduces the prediction accuracy. However, we can achieve an accuracy of over 70% when the r and i magnitudes are available. Since the stars in this study are nearby (d ≲ 1300 pc for 95% of the stars), the dust extinction can reduce the prediction accuracy by only 3%. Finally, we used our optimized RF models to predict the spectral sub-types of M dwarfs from the Catalog of Cool Dwarf Targets for the Transiting Exoplanet Survey Satellite, and we provide the optimized RF models for public use.
Understanding travel behavior is crucial to transportation decarbonization. OpenPATH is an open-source mobility platform which collects and analyzes human travel behavior at the individual level. The mobile application passively senses trips and prompts users to label them. However, users find the labeling process burdensome; less than half the trips are typically labeled, making much of the data unusable in aggregate analyses of mobility patterns. Prior work has addressed the response fatigue challenge through automated mode inference using sensor data, but sensors cannot capture all aspects of travel behavior. We explore an alternative approach in which we leverage prior user input to predict travel choices in novel trips. We first explore trip clustering methods and develop a novel two-step pipeline using DBSCAN and SVMs to extract realistic geospatial clusters. We then propose two strategies to predict trip labels: (i) clustering trips and extrapolating labels for similar trips, and (ii) random forest classification. The random forest approach is able to achieve - $70-80% accuracy (purpose: 72%, mode: 79%, replaced mode: 81%). These novel approaches to trip classification allow us to increase the rate of user labeling by suggesting predicted labels to be verified by the user. Unlabeled trips can also contribute to aggregate analyses, using label predictions and their associated confidences as a substitute. While there exist other travel survey apps with the ability to infer travel choices, to our knowledge, this is the first paper to describe such a supervised system and rigorously evaluate it.
This study is to provide predictive understanding of the associations of various weather attributes with residential and commercial load profiles, for a variety of climate zones and seasons. In this work, machine learning (ML) approaches were used to identify and quantify the impacts of various weather attributes on residential and commercial electricity demand and its components across the western United States. Performance and transferability of the developed ML models were then evaluated across different temperate zones (e.g., southern, middle, and northern US) and across coastal, mid-continent, and wet zones, with inputs of weather condition data from the National Oceanic and Atmospheric Administration (NOAA) at representative weather stations. The predictive models were developed based on the ranked/screened factors using the regression tree (RT) and random forest (RF) approaches, for five different scenarios (seasons).
An accurate characterization of the wind resource available at hub-height is required for an efficient and bankable wind farm project. However, direct measurement of wind speed at the constantly increasing height of the hub of commercial wind turbines is oftentimes challenging and expensive, so that it is common practice to vertically extrapolate the wind resource from lower and more easily accessible levels. Conventional techniques for wind speed vertical extrapolation include the use of a power law and a logarithmic profile. While simple, the limits in accuracy of these methods have been shown in various studies. Recently, machine learning has been proposed as a new method to vertically extrapolate winds. All the published studies on the topic assess the performance of machine learning techniques in vertically extrapolating the wind resource at the same location where the algorithm has been trained. However, in real-world applications, the wind resource is measured at the instrument location, but it then needs to be extrapolated at hub height at the location of the wind turbines within the find farm. To be able to fully recommend the use of machine learning techniques over the simple power law and logarithmic law, the spatial variability of the performance improvements of the machine learning approaches needs to be assessed. Here, we propose a round-robin validation of a machine learning-based method for wind speed extrapolation. We use 20 months of observations at four locations spanning a 100 km wide region at the Southern Great Plains (SGP) atmospheric observatory, in north-central Oklahoma. At each location, we train a random forest to predict 30-min average wind speed at 143 m AGL. We use as input features lidar wind speed at 65 m AGL, time of day, sonic anemometer wind speed at 4 m AGL, turbulent kinetic energy, and Obukhov length. First, we perform a same-site comparison of the performance of the proposed random forest against the conventional techniques for wind speed extrapolation (namely power law and logarithmic profile, with widely accepted stability corrections). We find that the random forest outperforms the power law in vertically extrapolating wind speed in all the considered stability regimes, with a 33% reduction in MAE for stable conditions, and a 31% reduction in unstable conditions. Similar results are found when comparing predictions of extrapolated winds from the logarithmic profile and the random forest with the observed values. Next, we propose a round-robin validation, to use the random forest trained at each site to extrapolate wind speed at the remaining three sites. We find that the performance of the random forest approach degrades when the algorithm is tested at a site different than the training one. However, even under those circumstances, the machine learning-based approach still outperforms the conventional techniques for wind speed extrapolation, with, on average, a reduction in mean absolute error between 15 and 20% over the conventional methods, with the largest benefits obtained under stable conditions.
Rice cultivation in Bhutan has been increasingly threatened by deteriorating soil health and outbreaks of diseases and pests associated with the global change in climate patterns. Field surveys, which the national government of Bhutan has relied on to monitor remote agricultural lands, are becoming increasingly overwhelmed by growing threats to agricultural health. To address these concerns, NASA DEVELOP partnered with the Department of Agriculture of Bhutan, the Bhutan Foundation, and the Ugyen Wangchuck Institute of Conservation and Environmental Research (UWICER) and worked to increase the government of Bhutan’s agricultural monitoring capacity. Utilizing Earth observations including Landsat 8 Operational Land Imager (OLI), Sentinel-1 C-band Synthetic Aperture Radar (C-SAR), Shuttle Radar Topography Mission (SRTM), and Planet imagery, the DEVELOP team worked with NASA SERVIR and created a sampling protocol to identify rice plantations and supplement field surveys for more efficient agriculture monitoring. The analysis focused on districts Paro, Punakha, Samtse, Sarpang, Trongsa, Zhemgang, Wangdue Phodrang, and Samdrup Jongkhar in the year 2020 during the period of transplantation (June) to harvesting of rice (November). The team provided the partners with a sampling protocol for integrating NASA Earth observations into their crop monitoring methods, as well as a crop mask for rice identification and to aid crop management. The crop mask for rice was developed using the Random Forest (RF) classifier for the eight districts of Bhutan. Visually, the random forest model has proved to be more accurate and precise than the classification and Regression Tree model. Statistically, the Random Forest model was 91.8% accurate in identifying rice in Bhutan.
Multibeam sonars are widely used for environmental monitoring of fauna at marine renewable energy sites. However, they can rapidly accrue vast volumes of data, which poses a challenge for data processing. Here, using data from a deployment in a tidal channel with peak currents of 1–2 m s –1 , we demonstrate the data-reduction benefits of real-time automatic classification of targets detected and tracked in multibeam sonar data. First, we evaluate classification capabilities for three machine learning algorithms: random forests, support vector machines, and k-nearest neighbors. For each algorithm, a hill-climbing search optimizes a set of hand-engineered attributes that describe tracked targets. Here, the random forest algorithm is found to be most effective—in postprocessing, discriminating between biological and nonbiological targets with a recall rate of 0.97 and a precision of 0.60. In addition, 89% of biological targets are correctly classified as either seals, diving birds, fish schools, or small targets. Model dependence on the volume of training data is evaluated. Second, a real-time implementation of the model is shown to distinguish between biological targets and nonbiological targets with nearly the same performance as in postprocessing. From this, we make general recommendations for implementing real-time classification of biological targets in multibeam sonar data and the transferability of trained models.