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At least 91 records · Page 5

Azobenzene-based sinusoidal surface topography drives focal adhesion confinement and guides collective migration of epithelial cells

Surface topography is a key parameter in regulating the morphology and behavior of single cells. At multicellular level, coordinated cell displacements drive many biological events such as embryonic morphogenesis. However, the effect of surface topography on collective migration of epithelium has not been studied in detail. Mastering the connection between surface features and collective cellular behaviour is highly important for novel approaches in tissue engineering and repair. Herein, we used photopatterned microtopographies on azobenzene-containing materials and showed that smooth topographical cues with proper period and orientation can efficiently orchestrate cell alignment in growing epithelium. Furthermore, the experimental system allowed us to investigate how the orientation of the topographical features can alter the speed of wound closure in vitro. Our findings indicate that the extracellular microenvironment topography coordinates their focal adhesion distribution and alignment. These topographic cues are able to guide the collective migration of multicellular systems, even when cell–cell junctions are disrupted.

59 BASIC BIOLOGICAL SCIENCES↗

Topography inversion in scanning tunneling microscopy of single-atom-thick materials from penetrating substrate states

Scanning tunneling microscopy (STM) is one of the indispensable tools to characterize surface structures, but the distinction between atomic geometry and electronic effects based on the measured tunneling current is not always straightforward. In particular, for single-atomic-thick materials (graphene or boron nitride) on metallic substrates, counterintuitive phenomena such as a larger tunneling current for insulators than for metal and a topography opposite to the atomic geometry are reported. Using first-principles density functional theory calculations combined with analytical modeling, we reveal the critical role of penetrating states of metallic substrates that surpass 2D material states, hindering the measurement of intrinsic 2D materials states and leading to topography inversion. Our finding should be instrumental in the interpretation of STM topographies of atomic-thick materials and in the development of 2D material for (opto)electronic and various quantum applications.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Effects of Vegetation and Topography on the Boundary Layer Structure above the Amazon Forest

Observational data from two field campaigns in the Amazon forest were used to study the vertical structure of turbulence above the forest. The analysis was performed using the reduced turbulent kinetic energy (TKE) budget and its associated two-dimensional phase space. Results revealed the existence of two regions within the roughness sublayer in which the TKE budget cannot be explained by the canonical flat-terrain TKE budgets in the canopy roughness sublayer or in the lower portion of the convective ABL. Data analysis also suggested that deviations from horizontal homogeneity have a large contribution to the TKE budget. Results from LES of a model canopy over idealized topography presented similar features, leading to the conclusion that flow distortions caused by topography are responsible for the observed features in the TKE budget. These results support the conclusion that the boundary layer above the Amazon forest is strongly impacted by the gentle topography underneath.

54 ENVIRONMENTAL SCIENCES↗

Topography restoration in white-light interferometry using an instrument transfer function evaluated with binary pseudo-random arrays

Accurate knowledge of the instrument transfer function (ITF) is vital for topography measurements using white-light interferometry (WLI). To this end, we derive a complete set of analytical expressions for the power spectral density (PSD) of a discretely sampled binary pseudo-random array (BPRA) as a theoretical benchmark. We then determine the ITF by comparing this theoretical PSD with the measured PSD of the BPRA. For the Zygo ZeGage Pro HR with a objective, the determined ITF closely matches the nominal modulation transfer function (MTF). Accordingly, we integrate the nominal MTF into Fourier-domain restoration filters and apply them to practical WLI topography data, yielding restored topographies that show improved agreement with atomic force microscopy measurements. Overall, our integrated BPRA-based ITF measurement and filtering methodology offers a robust yet practical means of characterizing WLI performance and enhancing the accuracy of surface measurements.

Hirose, Shigenobu [Japan Agency for Marine Earth S↗

Genesis of topography in buffered chemical polishing of niobium for application to superconducting radiofrequency accelerator cavities

Topography arising from the final etch step in preparing niobium superconducting radiofrequency (SRF) accelerator cavities is understood to significantly impact cavity performance at high field levels. This study investigated the effect of process temperature and time on the etch rate and topography arising from the widely-used buffered chemical polishing (BCP). This study aims to understand more thoroughly the genesis of topography in BCP of polycrystalline niobium, with the ultimate aim of finding a path to surface smoothness comparable to that obtained by electro-polishing (EP). It was found that the etch process is controlled by the surface reaction; and that the etch rate varies with crystallographic orientation. The familiar micron-scale roughening necessarily results. Gas evolution has an impact, but is secondary. The major outcome is that surface smoothness comparable to EP appears to be inherently unachievable for polycrystalline niobium using BCP, setting an upper limit to the gradient for which it is useful.

Reece, Charles↗

Topography on satellite surfaces and the shape of asteroids.

Consideration of the topography and shape of incompressible, nonrotating, isothermal, spherical objects as an approach to the study of the topography and shape of smaller planetary bodies. A static model and a creep deformation model are applied in the process. Factors and forces which may have a bearing on the geometry and topography of small planetary bodies are discussed.

Johnson, T. V.↗

Influence of planetary-scale topography on the diurnal thermal tide during the 1971 Martian dust storm

Data obtained with the Mariner 9 infrared spectroscopy experiment during the Martian Dust Storm of 1971 to 1972 are examined for evidence of topographic influence on the atmospheric thermal structure. Temperature perturbations which are well correlated with the planetary scale topography are found superposed on the large amplitude diurnal thermal tide. Applications of tidal theory to the data indicate that the observed perturbations result from the kinematic interaction of the westward traveling diurnal wave with the large scale components of topography. The dominant mode is excited by the wave-number two topography component and is a vertically evanescent eastward traveling wave with an equivalent depth comparable to the atmospheric scale height. The principle dynamic effect of this mode is the enhancement of the amplitude of the near-surface diurnal wind to over 40m/sec in limited areas near 30 deg south latitude. It appears likely that dust was injected into the atmosphere in these regions during the storm.

Conrath, B. J.↗

Influence of planetary-scale topography on the diurnal thermal tide during the 1971 Martian dust storm

Data obtained with the Mariner 9 infrared spectroscopy experiment during the Martian dust storm of 1971-72 are examined for evidence of topographic influence on the atmospheric thermal structure. Temperature perturbations which are well correlated with the planetary-scale topography are found superposed on the large-amplitude diurnal thermal tide previously reported. Applications of tidal theory to the data indicate that the observed perturbations result from the kinematic interaction of the westward traveling diurnal wave with the large-scale components of topography. The dominant mode is excited by the wavenumber 2 topography component and is a vertically evanescent, eastward traveling wave with an equivalent depth comparable to the atmospheric-scale height. The principle dynamic effect of this mode is the enhancement of the amplitude of the near-surface diurnal wind to over 40 m/s in limited areas near 30 deg S latitude. Thus, it appears likely that dust was injected into the atmosphere in these regions during the storm. Other waves excited include vertically propagating modes which produce little effect in the lower atmosphere, but may represent a source of energy for the upper atmosphere during dust storm conditions.

Conrath, B. J.↗

Mars topography harmonics and geophysical implications

The paper describes an improved model of Martian global topography which has been obtained by fitting a sixteenth-degree harmonic series to occultation, radar, spectral, and photogrammetric measurements. Empirical elevation data based on photographic data are used to supplement the observations in areas without data. Values for the mean radius, the mean density, and the displacement of the center of the figure from the center of mass are presented. The reported geometric flattening is too great and the reported dynamic flattening is too small for Mars to be homogeneous and hydrostatic. Maps of the data distribution, global topography, and Bouguer gravity anomaly are interpreted in terms of a crustal thickness map which is consistent with gravity, topography, and recent preliminary Viking seismic results.

Bills, B. G.↗

Venus - Comparison of gravity and topography in the vicinity of Beta Regio

The Doppler tracking data obtained from the Pioneer Venus Orbiter when it passed near Beta Regio yielded a peak vertical anomaly of 150 mGal when analyzed by our two stage procedure. A comparison of maps of the gravity and topography at comparable resolution shows a striking correlation. A scatter plot shows that the observed gravity anomaly is approximately 0.4 of that expected from uncompensated topography of half the mean density of Venus. However, the spectral admittance shows that the gravity anomalies can not be explained either by Airy compensation at fixed depth or by a model comprising an elastic plate atop an inviscid fluid. The gravity and topography variations may signify deep compensation or dynamic support for Beta Regio and more shallow compensation for other features.

Reasenberg, R. D.↗

Long wavelength gravity and topography anomalies

It is shown that gravity and topography anomalies on the earth's surface may provide new information about deep processes occurring in the earth, such as those associated with mantle convection. Two main reasons are cited for this. The first is the steady improvement that has occurred in the resolution of the long wavelength gravity field, particularly in the wavelength range of a few hundred to a few thousand km, mainly due to increased coverage of terrestrial gravity measurements and the development of radar altimeters in orbiting satellites. The second reason is the large number of numerical and laboratory experiments of convection in the earth, including some with deformable upper and lower boundaries and temperature-dependent viscosity. The oceans are thought to hold the most promise for determining long wavelength gravity and topography anomalies, since their evolution has been relatively simple in comparison with that of the continents. It is also shown that good correlation between long wavelength gravity and topography anomalies exists over some portions of the ocean floor

Watts, A. B.↗

Surface topography-connections between lubrication and failure initiation

The characteristics of the initial surface topography is intimately connected to the machining process by which it is produced. Both processes create a near surface region of residual stresses, microstructure and hardness that is different from the bulk. The material properties in this rather undefined region can significantly influence the mode of failure, such as wear, scuffing or fatigue, as well as the degree of failure resistance for a given material. Under full film elastohydrodynamic (EHD) conditions, where shear is accomodated within a relatively thick lubricant film, the normal and shear stresses are distributed uniformly over the near surface region, and the surface topography has little influence on the lubrication or failure process. Under more typical conditions where surface roughness and lubricant film thickness are of the same order of magnitude, the surface topography not only emerges as an important parameter in failure initiation, but it also becomes intimately involved in the lubrication process itself.

Wedeven, L. D.↗

Surface topography due to convection in a variable viscosity fluid - Application to short wavelength gravity anomalies in the central Pacific Ocean

Finite difference calculations of thermal convection in a fluid layer with a viscosity exponentially decreasing with temperature are performed in the context of examining the topography and gravity anomalies due to mantle convection. The surface topography and gravity anomalies are shown to be positive over regions of ascending flow and negative over regions of descending flow; at large Rayleigh numbers the amplitude of surface topography is inferred to depend on Rayleigh number to the power of 7/9. Compositional stratifications of the mantle is proposed as a mechanism for confining small-scale convection to a thin layer. A comparative analysis of the results with other available models is included.

Lin, J.↗

A scanning radar altimeter for mapping continental topography

Topographic information constitutes a fundamental data set for the Earth sciences. In the geological and geophysical sciences, topography combined with gravitational information provides an important constraint on the structure and rheologic properties of the crust and lithosphere. Detailed topography data can also be used to map offsets associated with faulting and to reveal the effects of tectonic deformation. In the polar regions, elevation data form a crucial but as yet largely unavailable resource for studying ice sheet mass balance and ice flow dynamics. The vast Antarctic ice sheet is the largest fresh water reservoir on Earth and is an important influence on ocean circulation and global climate. However, our knowledge of its stability is so limited that we cannot even specify whether the Antarctic ice sheet is growing or shrinking. It is clear that there is need for high quality global topography data. A summary of potential applications with their resolution requirements is shown.

Dixon, T. H.↗

Radial orbit error reduction and sea surface topography determination using satellite altimetry

A method is presented in satellite altimetry that attempts to simultaneously determine the geoid and sea surface topography with minimum wavelengths of about 500 km and to reduce the radial orbit error caused by geopotential errors. The modeling of the radial orbit error is made using the linearized Lagrangian perturbation theory. Secular and second order effects are also included. After a rather extensive validation of the linearized equations, alternative expressions of the radial orbit error are derived. Numerical estimates for the radial orbit error and geoid undulation error are computed using the differences of two geopotential models as potential coefficient errors, for a SEASAT orbit. To provide statistical estimates of the radial distances and the geoid, a covariance propagation is made based on the full geopotential covariance. Accuracy estimates for the SEASAT orbits are given which agree quite well with already published results. Observation equations are develped using sea surface heights and crossover discrepancies as observables. A minimum variance solution with prior information provides estimates of parameters representing the sea surface topography and corrections to the gravity field that is used for the orbit generation. The simulation results show that the method can be used to effectively reduce the radial orbit error and recover the sea surface topography.

Engelis, Theodossios↗

Feedback between ice flow, barotropic flow, and baroclinic flow in the presence of bottom topography

Coupling between externally driven barotropic flow and locally driven baroclinic flow in the presence of an ice cover and topography is studied. The topography is a necessary ingredient in this coupling. This study shows that the observed mesoscale activity of the ice edge seen in satellite imagery does not necessarily reflect the mesoscale baroclinic activity in the ocean. Besides oceanic eddies, the ice cover can trace the topographic changes via the coupling to the barotropic flow. A two-layer ocean model coupled to an ice model is constructed to simulate an ice-ocean system with a varying bottom topography. In the absence of wind, forcing the ice cover reflects the externally driven barotropic ocean response, especially topographically forced Taylor columns by forming ice streamers or meanders. Some of these features propagate (advected with the ocean currents) as a whole downstream, creating an image of eddy propagation even though there is no baroclinic structure underneath. When downwelling favorable winds (ice on the left from the wind direction) are turned on, in addition to this background barotropic flow, the Ekman flow in the ocean (toward the open ocean) will enhance the meandering of the ice edge due to the barotropic flow. During upwelling favorable winds, the ice edge stays rather compact, including the case when a strong baroclinic, cyclonic vortex is developing beneath an ice meander supported by the Taylor column in the ocean.

Hakkinen, Sirpa↗

Geoid and topography for infinite Prandtl number convection in a spherical shell

Geoid anomalies and surface and lower-boundary topographies are calculated for numerically generated thermal convection for an infinite Prandtl number, Boussinesq, axisymmetric spherical fluid shell with constant gravity and viscosity, for heating both entirely from below and entirely from within. Convection solutions are obtained for Rayleigh numbers Ra up to 20 times the critical Ra in heating from below and 27 times critical for heating from within. Geoid parallels surface undulations, and boundary deformation generally increases with increasing cell wavelength. Dimensionless geoid and topography in heating from below are about 5 times greater than in heating from within. Values for heating from within correlate more closely with geophysical data than values from heating from below, suggesting a predominance of internal heating in the mantle. The study emphasizes that dynamically induced topography and geoid are sensitive to the mode of heating in the earth's mantle.

Bercovici, D.↗

Dependence of image grey values on topography in SIR-B images

This paper focuses on the use of a high resolution digital elevation model (DEM) to aid in rectifying and enhancing synthetic aperture radar images. Using a synthetic backscatter image, the SIR-B images are manually rectified and resampled to remove geometric distortions caused by topography. In a second step, an improved reflectance function of incidence angle is derived from the DEM and the rectified image and this function is used to reduce radiometric effects of topography yielding an albedo image which clearly shows the thematic, as opposed to topographic content of the image. The procedure is tested on four SIR-B images of a scene in Argentina (crossover point) that is imaged under different azimuth and incidence angles. The similarity of the resulting images indicates that the procedure effectively reduces artefacts from the images that are dependent on topography.

Domik, G.↗