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Deployment of applications to the cloud, as opposed to on-premises, presents a number of new challenges to operations. Using an EOSDIS application deployed to NGAP as an example, we outline the commonality and differences you need to be aware of to successfully operate your application on the cloud.
Despite numerous studies to retrieve cloud properties using infrared measurements the information content of the data has not yet been fully exploited. In an effort to more fully utilize the information content of infrared measurements, we have developed a multi-spectral technique for retrieving effective cloud particle size, optical depth and effective cloud temperature. While applicable to all cloud types, we begin by validating our retrieval technique through analysis of MS spectral radiances obtained during the SUCCESS field campaign over the ARM SGP CART facility, and compare our retrieval product with lidar and MODIS Airborne Simulator (MAS) measurement results. The technique is then applied to the Nimbus-4 MS infrared spectral measurements to obtain global cloud information.
Cloud object storage is enabled for checkpoints of high performance computing applications using a middleware process. A plurality of files, such as checkpoint files, generated by a plurality of processes in a parallel computing system are stored by obtaining said plurality of files from said parallel computing system; converting said plurality of files to objects using a log structured file system middleware process; and providing said objects for storage in a cloud object storage system. The plurality of processes may run, for example, on a plurality of compute nodes. The log structured file system middleware process may be embodied, for example, as a Parallel Log-Structured File System (PLFS). The log structured file system middleware process optionally executes on a burst buffer node.
Parameterization of cloud microphysics is critical for accurate simulation of weather and climate, in which the characteristics of cloud particle spectrum inevitably further affect climate simulation by changing the cloud evolution and cloud radiation effects. The popular currently used double-moment cloud microphysics schemes in numerical models can predict the intercept (N 0 ) and slope (λ) parameters of cloud particle spectrum but cannot predict the spectral shape parameter (μ), which hinders accurate description of cloud physical processes in climate models. Therefore, in the present study, we built upon the ideas of previously developed triple-moment cloud microphysics scheme, considered radar reflectivity factor as the third predictor in addition to number and mass concentration, and introduced its related prediction equation to the Single Column Atmosphere Model Version 5.3 (SCAM5.3). Moreover, the relevant microphysical process formulas in the model were revised, and a triple-moment ice-cloud microphysics scheme was constructed to predict the μ of ice particle spectrum. Based on this model, a 29-day case of the Atmospheric Radiation Measurement Program in the summer of 1997 (ARM97) was simulated, and the differences in cloud fraction and radiation simulations between the double- and triple-moment schemes were analysed. The μ of ice particle spectrum predicted by the triple-moment scheme mainly ranged from 0 to 4; the peak value was around 2, and at least 85% of the μ values were greater than the default 0. Therefore, the μ=0 setting in the double-moment scheme is unreasonable. Moreover, the developed triple-moment ice-cloud microphysics scheme yielded a narrower ice particle spectrum, which was closer to the observation results of previous studies, than the double-moment cloud microphysics scheme (e.g., height=233 hPa). Furthermore, compared with the double-moment scheme, the triple-moment scheme achieved closer simulations of the cloud fraction observations, particularly for ice clouds in the upper levels. Considering the close association between cloud fraction and radiation, the error with the triple-moment scheme was smaller than that with the double-moment scheme regardless of the shortwave (surface downward shortwave radiation, net downward shortwave radiation at the top of the atmosphere, and net shortwave radiation at the surface) or longwave (surface downward longwave radiation and net longwave radiation at the surface) flux density. Finally, the improvement mechanism of the triple-moment scheme on cloud fraction and radiation simulations was explored. The major reason is that the triple-moment scheme weakens the autoconversion of ice crystal to form snow and enhances the growth process of ice crystal deposition, thereby increasing the mass concentration of ice crystals and ice cloud fraction. Overall, the developed triple-moment ice-cloud microphysics scheme can help improve the simulation ability of models for cloud-climate feedback and other processes.
Foldy is a cloud-based application that allows non-computational biologists to easily utilize advanced AI-based structural biology tools, including AlphaFold and DiffDock. With many deployment options, it can be employed by individuals, labs, universities, and companies in the cloud without requiring hardware resources, but it can also be configured to utilize locally available computers. Foldy enables scientists to predict the structure of proteins and complexes up to 6000 amino acids with AlphaFold, visualize Pfam annotations, and dock ligands with AutoDock Vina and DiffDock. In our manuscript, we detail Foldy’s interface design, deployment strategies, and optimization for various user scenarios. We demonstrate its application through case studies including rational enzyme design and analyzing proteins with domains of unknown function. Furthermore, we compare Foldy’s interface and management capabilities with other open and closed source tools in the field, illustrating its practicality in managing complex data and computation tasks. Our manuscript underlines the benefits of Foldy as a day-to-day tool for life science researchers, and shows how Foldy can make modern tools more accessible and efficient.
In satellite remote sensing clouds are usually considered an annoying interference. Satellite investigators go to unusual lengths to try to avoid clouds or to correct for their effects, and satellite data users routinely exclude cloudy data from analysis. Yet it was shown about a decade ago using TOMS data that for the study of tropospheric constituents, such as ozone, clouds can play a very beneficial role by allowing one to measure what otherwise cannot be directly measured from space. We call this technique "cloud Slicing". The so-called Convective Cloud Differential (CCD) method is one particular application of cloud slicing that has been applied successfully to data from TOMS and other similar satellite instruments to study the behavior of tropical tropospheric ozone at variety of spatial and temporal scales. However, there has been considerable confusion in the literature as to what exactly one measures from reflected sunlight instruments such as TOMS in cloudy atmospheres. We will discuss recently completed analysis of data taken by the Ozone Monitoring Instrument (OMI) on the Aura satellite in conjunction with several other instruments on the A-train satellite constellation to present new insight on how clouds affect absorption by aerosols and trace gases at reflected wavelengths (UV-SWIR). We will show several examples to illustrate how this insight is helping us to study the behavior of trace gases and aerosols in the atmosphere that cannot be studied by focusing only on cloud-free scenes.
The NASA Langley Satellite ClOud and Radiation Property retrieval System (SatCORPS) team provides tools for retrieving cloud information from operational and research meteorological imager data. LEO and GEO satellite imagers are used for fusing hourly mosaics which create the Global Cloud Composite (GCC). The GCC provides global cloud products with a low latency which can help satisfy the growing needs of the research, modeling and business communities. The Esri ArcGIS system is used to transform the GCC data into Analysis Ready Data (ARD) which can be utilized for a variety of visualization and analysis activities in support of weather diagnoses/forecasting, Earth Sciences remote sensing applications, and disaster management. Additionally, the data is enabled as ArcGIS Image Services and Open Geospatial Consortium (OGC) Web Mapping/Coverage Services to be consumed via API within a web mapping application. We will present a preview of the new interactive SatCORPS GCC web mapping application and its capabilities in allowing users to access and use GIS data within it.
The variety of instance types available on cloud platforms offers enormous flexibility to match the requirements of applications with available resources. However, selecting the most suitable instance type and configuring an application to optimally execute on that instance type can be complicated and time-consuming. For example, application parallelism flags must match available cores and problem sizes must be tuned to match available memory. As the search space of application configurations can be enormous, we propose an automated approach, called ParaOpt, to automatically explore and tune application configurations on arbitrary cloud instances. ParaOpt supports arbitrary applications, enables use of custom optimization methods, and can be configured with different optimization targets such as runtime and cost. We evaluate ParaOpt by optimizing genomics, molecular dynamics, and machine learning applications with four types of optimizers. We show with as few as 15 parameterized executions of an application, representing between 1.2%-26.7% of the search space, that ParaOpt is able to identify the optimal configuration in 32.7% of experiments and a near-optimal configuration in 83.2% of cases. As a result of using near-optimal configurations, ParaOpt reduces overall execution time by up to 85.8% when compared with using the default configuration.
The automatic cloud tracking system was applied to METEOSAT 6.7 micrometers water vapor measurements to learn whether the system can track the motions of water vapor patterns. Data for the midlatitudes, subtropics, and tropics were selected from a sequence of METEOSAT pictures for 25 April 1978. Trackable features in the water vapor patterns were identified using a clustering technique and the features were tracked by two different methods. In flat (low contrast) water vapor fields, the automatic motion computations were not reliable, but in areas where the water vapor fields contained small scale structure (such as in the vicinity of active weather phenomena) the computations were successful. Cloud motions were computed using METEOSAT infrared observations (including tropical convective systems and midlatitude jet stream cirrus).
It is shown that radiatively driven, optically thin winds from active galactic nuclei are thermally unstable, provided that the mass loss rates are not smaller than about 50 solar masses/year. Clouds form at distances of less than about 1 pc, with electron densities greater than 100 million/cu cm, temperatures of more than 10,000 K, and radii between 3 x 10 to the 14th and 10 to the 15th cm. These values agree with the values deduced from observations. Since the clouds are formed in a high velocity wind, this model, as does the model by Eilek and Caroff (1979), avoids problems of disruption inherent in using radiation pressure to accelerate clouds from rest to velocities up to 0.1 c needed to explain the emission line widths. The thermal balance of the gas is discussed, the criteria for thermal instability are given, and a perturbation analysis is made. This analysis is restricted to objects with bolometric luminosities lower than approximately 2 x 10 to the 46th ergs/sec. For more luminous objects, only winds slightly optically thick to electron scattering can be unstable, provided one can extend this analysis to the optically thick case.
A wide range of new observations of the wide-angle tailed radio galaxy 1919+479 and its environs are presented. Multifrequency and multiconfiguration VLA observations are described, ranging in resolution from 0.7 arcsec to 40 arcsec. Distributions of source structures at different scale sizes, spectral indices, and polarizations are presented. Wide-field photographic and CCD imaging data are presented along with a review of the measured galaxy redshifts in the field. A newly reprocessed Einstein IPC X-ray image of the cluster is shown, and the X-ray emission's relationship to the radio morphology is described. The radio, optical, and X-ray data are used to constrain the cD galaxy dynamics and models for bending the radio structure. In particular, the possible role of jet collisions with clouds in the intracluster medium is considered. The applicability of cloud collision models to wide-angle tails in general is considered.
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Collection of applications and cloud templates. Project currently based on www.packer.io for automation, www.github.com/boxcutter templates and the www.github.com/csd-dev-tools/ClockworkVMs application for wrapping both of the above for easy creation of virtual systems. Will in future also contain cloud templates tuned for various services, applications and purposes.
A bispectral technique was employed to determine the cirrus cloud-top temperature. Data were gathered from aircraft equipped with the ARIES radiometer, which on sixteen flights provided IR readings at 6.5 and 11.5 microns of cirrus tops. The flights were made on a NASA Convair to a maximum ceiling of 12,500 m. The brightness temperatures above the cirrus were found to be consistently colder, by up to 40 K, than the 11.5 microns window channel, and good spatial correlations were displayed over whole clouds. Effective emissivities are calculated for both channels and applied to Meteosat digital imagery. The subsequent derived temperatures were significantly colder than black-body temperatures, which is explained by taking into account the absorption of emitted radiation by water vapor.
We present radiative transfer models of collapsing clouds with rotation and apply them to B335 and IRAS 16293-2422, the two best candidates of protostellar collapse known to date. By including rotation in the manner of Tereby, Shu, & Cassen (1984), we can reproduce the profiles of several molecular lines not only toward the center position, but also toward a grid of positions near the center. We find that the model of B335 by Zhou et al. (1993) is not affected significantly by the presence of rotation. By including rotation, we can reproduce the observations of IRAS 16293-2422 by Menden et al. (1987); hence, we support the infall interpretations of spectral lines from IRAS 16293-2422 proposed by Walker et al. (1986). We also observed the large-scale rotation of IRAS 16293-2422 in the C(18)O J = 2 approaches 1 line. The observed rotation rate is a factor of 6 smaller than that required to explain the small-scale CS data of Menden et al. (1987). This probably means the precollapse cloud has differential rotation, possibly due to more efficient magnetic braking on large scales.
FPGAs are increasingly common in modern applications, and cloud providers now support on-demand FPGA acceleration in datacenters. Applications in datacenters run on virtual infrastructure, where consolidation, multi-tenancy, and workload migration enable economies of scale that are fundamental to the provider's business. However, a general strategy for virtualizing FPGAs has yet to emerge. While manufacturers struggle with hardware-based approaches, we propose a compiler/runtime-based solution called Synergy. We show a compiler transformation for Verilog programs that produces code able to yield control to software atsub-clock-tickgranularity according to the semantics of the original program. Synergy uses this property to efficiently support core virtualization primitives: suspend and resume, program migration, and spatial/temporal multiplexing, on hardware which is availabletoday.We use Synergy to virtualize FPGA workloads across a cluster of Intel SoCs and Xilinx FPGAs on Amazon F1. The workloads require no modification, run within 3--4x of unvirtualized performance, and incur a modest increase in FPGA fabric usage.
The EOS science team has developed an elaborate global MODIS cloud detection procedure, and the resulting MODIS product (MOD35) is used in the retrieval process of several geophysical parameters to mask out clouds. While the global application of the cloud detection approach appears quite robust, the product has some shortcomings on the regional scale, often over determining clouds in a variety of settings, particularly at night. This over-determination of clouds can cause a reduction in the spatial coverage of MODIS derived clear-sky products. To minimize this problem, a new regional cloud detection method for use with MODIS data has been developed at NASA's Global Hydrology and Climate Center (GHCC). The approach is similar to that used by the GHCC for GOES data over the continental United States. Several spatially varying thresholds are applied to MODIS spectral data to produce a set of tests for detecting clouds. The thresholds are valid for each MODIS orbital pass, and are derived from 20-day composites of GOES channels with similar wavelengths to MODIS. This paper and accompanying poster will introduce the GHCC MODIS cloud mask, provide some examples, and present some preliminary validation.
Numerical cloud models, which are based the non-hydrostatic equations of motion, have been extensively applied to cloud-scale and mesoscale processes during the past four decades. Because cloud-scale dynamics are treated explicitly, uncertainties stemming from convection that have to be parameterized in (hydrostatic) large-scale models are obviated, or at least mitigated, in cloud models. Global models will use the non-hydrostatic framework when their horizontal resolution becomes about 10 kilometers, the theoretical limit for the hydrostatic approximation. This juncture will be reached one to two decades from now. Over the past generation, voluminous datasets on atmospheric convection have been accumulated from radar, instrumented aircraft, satellites, and rawinsonde measurements in field campaigns, enabling the detailed evaluation of models. Improved numerical methods have resulted in more accurate and efficient dynamical cores in models. Improvements have been made in the parameterizations of microphysical processes, radiation, boundary-layer effects, and turbulence; however, microphysical parameterizations remain a major source of uncertainty in all classes of atmospheric models. In recent years, exponentially increasing computer power has extended cloud-resolving-model integrations from hours to months, the number of computational grid points from less than a thousand to close to ten million. Three-dimensional models are now more prevalent. Much attention is devoted to precipitating cloud systems where the crucial 1-kilometer scales are resolved in horizontal domains as large as 10,000 kilometers in two-dimensions, and 1,000 x 1,000 square kilometers in three-dimensions. Cloud models now provide statistical information useful for developing more realistic physically based parameterizations for climate models and numerical weather prediction models. It is also expected that NWP and mesoscale model can be run in grid size similar to cloud resolving model through nesting technique. A review of developments, improvements and applications of cloud models (GCE and WRF) at Goddard will be presented in this talk. In particular, a new approach to using multi-scale modeling system to study the interactions between clouds, precipitation, aerosols and land will be presented.