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At least 91 records · Page 5

The continuous readout stream of the MicroBooNE liquid argon time projection chamber for detection of supernova burst neutrinos

The MicroBooNE continuous readout stream is a parallel readout of the MicroBooNE liquid argon time projection chamber (LArTPC) which enables detection of non-beam events such as those from a supernova neutrino burst. The low energies of the supernova neutrinos and the intense cosmic-ray background flux due to the near-surface detector location makes triggering on these events very challenging. Instead, MicroBooNE relies on a delayed trigger generated by SNEWS (the Supernova Early Warning System) for detecting supernova neutrinos. The continuous readout of the LArTPC generates large data volumes, and requires the use of real-time compression algorithms (zero suppression and Huffman compression) implemented in an FPGA (field-programmable gate array) in the readout electronics. In this paper we present the results of the optimization of the data reduction algorithms, and their operational performance. To demonstrate the capability of the continuous stream to detect low-energy electrons, a sample of Michel electrons from stopping cosmic-ray muons is reconstructed and compared to a similar sample from the lossless triggered readout stream.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Algebraic Compression of Free Fermionic Quantum Circuits: Particle Creation, Arbitrary Lattices and Controlled Evolution

In this work [1], we extend our recently introduced algebraic circuit compression algorithms [2], [3] that can compress time evolution circuits of free fermionic Hamiltonians on an n-site 1D chain, equation H(t)=∑i=1n-1 (hi(t)cici+1+pi(t)cici+1)+h.c., 1 equation in three significant ways: (1) we allow for compression of free fermionic Hamiltonians on arbitrary lattices, (2) we incorporate particle creation/annihilation operators into the compression schemes, and (3) we extend the compression scheme to controlled time-evolution operators. We illustrate the effectiveness of our approach by simulating the dynamics of a fermion on a 4× 4 2D square lattice on ibmq_washington, both in the presence and absence of disorder. Our quantum simulations show a remarkably high fidelity which is enabled through the compressed circuits.

Kökcü, Efekan↗

GPU Lossless Hyperspectral Data Compression System

Hyperspectral imaging systems onboard aircraft or spacecraft can acquire large amounts of data, putting a strain on limited downlink and storage resources. Onboard data compression can mitigate this problem but may require a system capable of a high throughput. In order to achieve a high throughput with a software compressor, a graphics processing unit (GPU) implementation of a compressor was developed targeting the current state-of-the-art GPUs from NVIDIA(R). The implementation is based on the fast lossless (FL) compression algorithm reported in "Fast Lossless Compression of Multispectral-Image Data" (NPO- 42517), NASA Tech Briefs, Vol. 30, No. 8 (August 2006), page 26, which operates on hyperspectral data and achieves excellent compression performance while having low complexity. The FL compressor uses an adaptive filtering method and achieves state-of-the-art performance in both compression effectiveness and low complexity. The new Consultative Committee for Space Data Systems (CCSDS) Standard for Lossless Multispectral & Hyperspectral image compression (CCSDS 123) is based on the FL compressor. The software makes use of the highly-parallel processing capability of GPUs to achieve a throughput at least six times higher than that of a software implementation running on a single-core CPU. This implementation provides a practical real-time solution for compression of data from airborne hyperspectral instruments.

Aranki, Nazeeh I.↗

Competitive Parallel Processing For Compression Of Data

Momentarily-best compression algorithm selected. Proposed competitive-parallel-processing system compresses data for transmission in channel of limited band-width. Likely application for compression lies in high-resolution, stereoscopic color-television broadcasting. Data from information-rich source like color-television camera compressed by several processors, each operating with different algorithm. Referee processor selects momentarily-best compressed output.

Diner, Daniel B.↗

Lossless Astronomical Image Compression and the Effects of Random Noise

In this paper we compare a variety of modern image compression methods on a large sample of astronomical images. We begin by demonstrating from first principles how the amount of noise in the image pixel values sets a theoretical upper limit on the lossless compression ratio of the image. We derive simple procedures for measuring the amount of noise in an image and for quantitatively predicting how much compression will be possible. We then compare the traditional technique of using the GZIP utility to externally compress the image, with a newer technique of dividing the image into tiles, and then compressing and storing each tile in a FITS binary table structure. This tiled-image compression technique offers a choice of other compression algorithms besides GZIP, some of which are much better suited to compressing astronomical images. Our tests on a large sample of images show that the Rice algorithm provides the best combination of speed and compression efficiency. In particular, Rice typically produces 1.5 times greater compression and provides much faster compression speed than GZIP. Floating point images generally contain too much noise to be effectively compressed with any lossless algorithm. We have developed a compression technique which discards some of the useless noise bits by quantizing the pixel values as scaled integers. The integer images can then be compressed by a factor of 4 or more. Our image compression and uncompression utilities (called fpack and funpack) that were used in this study are publicly available from the HEASARC web site.Users may run these stand-alone programs to compress and uncompress their own images.

Pence, William↗

Error-Bounded Learned Scientific Data Compression with Preservation of Derived Quantities

Scientific applications continue to grow and produce extremely large amounts of data, which require efficient compression algorithms for long-term storage. Compression errors in scientific applications can have a deleterious impact on downstream processing. Thus, it is crucial to preserve all the “known” Quantities of Interest (QoI) during compression. To address this issue, most existing approaches guarantee the reconstruction error of the original data or primary data (PD), but cannot directly control the problem of preserving the QoI. In this work, we propose a physics-informed compression technique that is composed of two parts: (i) reduction of the PD with bounded errors and (ii) preservation of the QoI. In the first step, we combine tensor decompositions, autoencoders, product quantizers, and error-bounded lossy compressors to bound the reconstruction error at high levels of compression. In the second step, we use constraint satisfaction post-processing followed by quantization to preserve the QoI. To illustrate the challenges of reducing the reconstruction errors of the PD and QoI, we focus on simulation data generated by a large-scale fusion code, XGC, which can produce tens of petabytes in a single day. The results show that our approach can achieve a high compression amount while accurately preserving the QoI within scientifically acceptable bounds.

97 MATHEMATICS AND COMPUTING↗

A packet data compressor

We are in the preliminary stages of creating an operational system for losslessly compressing packet data streams. The end goal is to reduce costs. Real world constraints include transmission in the presence of error, tradeoffs between the costs of compression and the costs of transmission and storage, and imperfect knowledge of the data streams to be transmitted. The overall method is to bring together packets of similar type, split the data into bit fields, and test a large number of compression algorithms. Preliminary results are very encouraging, typically offering compression factors substantially higher than those obtained with simpler generic byte stream compressors, such as Unix Compress and HA 0.98.

Grunes, Mitchell R.↗

Design of source coders and joint source/channel coders for noisy channels

A theory behind a proposed joint source/channel coding approach is developed and a variable rate design approach which provides substantial improvement over current joint source/channel coder designs is obtained. The Rice algorithm as applied to the output of the Gamma Ray Detector of the Mars Orbiter is evaluated. An alternative algorithm is obtained which outperforms the Rice both in terms of data compression and noisy channel performance. A high-fidelity low-rate image compression algorithm is developed which provides almost distortionless compression of high resolution images.

Sayood, Khalid↗

A Novel Event Detection Method Using PMU Data with High Precision

To take full advantage of the considerably high reporting rate of phasor measurement units (PMU) data, this paper develops a novel PMU-based event detection methodology. Considering the huge amount of streaming PMU data, a data compression algorithm, swinging door trending (SDT), is first used to compress the PMU data and generate multiple compression intervals. Then dynamic programming is utilized to solve the optimization problem, which is recursively constituted by a score function. Based on predefined PMU event rules, dynamic programming merges adjacent compression intervals with the same slope direction. Finally, all the PMU event features are characterized. A conventional wavelet-based event detection method is compared with the developed dynamic programming based SDT (DPSDT) method. Numerical simulations on the real-time and synthetic PMU data show that the DPSDT method can accurately detect the start-time of an event and the event placement with relatively high precision. Furthermore, the PMU event features, including the magnitude and duration of strokes, are characterized.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Evaluating the effect of online data compression on the disk cache of a mass storage system

A trace driven simulation of the disk cache of a mass storage system was used to evaluate the effect of an online compression algorithm on various performance measures. Traces from the system at NASA's Center for Computational Sciences were used to run the simulation and disk cache hit ratios, number of files and bytes migrating to tertiary storage were measured. The measurements were performed for both an LRU and a size based migration algorithm. In addition to seeing the effect of online data compression on the disk cache performance measure, the simulation provided insight into the characteristics of the interactive references, suggesting that hint based prefetching algorithms are the only alternative for any future improvements to the disk cache hit ratio.

Pentakalos, Odysseas I.↗

Parallel image compression

A parallel compression algorithm for the 16,384 processor MPP machine was developed. The serial version of the algorithm can be viewed as a combination of on-line dynamic lossless test compression techniques (which employ simple learning strategies) and vector quantization. These concepts are described. How these concepts are combined to form a new strategy for performing dynamic on-line lossy compression is discussed. Finally, the implementation of this algorithm in a massively parallel fashion on the MPP is discussed.

Reif, John H.↗

Scalable Hybrid Learning Techniques for Scientific Data Compression

Data compression is becoming critical for storing scientific data because many scientific applications need to store large amounts of data and post process this data for scientific discovery. Unlike image and video compression algorithms that limit errors to primary data (PD), scientists require compression techniques that accurately preserve derived quantities of interest (QoIs). Here, this article presents a physics-informed compression technique implemented as an end-to-end, scalable, GPU-based pipeline for data compression that addresses this requirement. Our hybrid compression technique combines machine learning techniques and standard compression methods. Specifically, we combine an autoencoder, an error-bounded lossy compressor to provide guarantees on raw data error, and a constraint satisfaction post-processing step to preserve the QoIs within a minimal error (generally less than floating point error). The effectiveness of the data compression pipeline is demonstrated by compressing nuclear fusion simulation data generated by a large-scale fusion code, XGC, which produces hundreds of terabytes of data in a single day. Our approach works within the ADIOS framework and results in compression by a factor of more than 150 while requiring only a few percent of the computational resources necessary for generating the data, making the overall approach highly effective for practical scenarios.

ITER↗

Error Analysis of ZFP Compression for Floating-Point Data

Compression of floating-point data will play an important role in high-performance computing as data bandwidth and storage become dominant costs. Lossy compression of floating-point data is powerful, but theoretical results are needed to bound its errors when used to store look-up tables, simulation results, or even the solution state during the computation. In this paper, we analyze the round-off error introduced by ZFP, a lossy compression algorithm. Here, the stopping criteria for ZFP depends on the compression mode specified by the user: fixed rate, fixed accuracy, or fixed precision [P. Lindstrom, ZFP 0.5.3 Documentation, 2018]. While most of our discussion is focused on the fixed precision mode of ZFP, we establish a bound on the error introduced by all three compression modes. In order to tightly capture the error, first we introduce a vector space that allows us to work with binary representations of components. Under this vector space, we define operators that implement each step of the ZFP compression and decompression to establish a bound on the error caused by ZFP. To conclude, numerical tests are provided to demonstrate the accuracy of the established bounds.

97 MATHEMATICS AND COMPUTING↗

Progress toward Accelogic compression in ROOT

For the last 7 years, Accelogic pioneered and perfected a radically new theory of numerical computing codenamed “Compressive Computing”, which has an extremely profound impact on real-world computer science [1]. At the core of this new theory is the discovery of one of its fundamental theorems which states that, under very general conditions, the vast majority (typically between 70% and 80%) of the bits used in modern large-scale numerical computations are absolutely irrelevant for the accuracy of the end result. This theory of Compressive Computing provides mechanisms able to identify (with high intelligence and surgical accuracy) the number of bits (i.e., the precision) that can be used to represent numbers without affecting the substance of the end results, as they are computed and vary in real time. The bottom-line outcome will be to provide state-of-the-art compression algorithms --and accompanying software libraries-- able to surpass the performance of the compression engines currently available in the ROOT [7] framework. The resulting technology has the capability to enable substantial economic and operational gains (including speedup) for High Energy and Nuclear Physics data storage/analysis. In our initial studies, a factor of nearly x4 (3.9) compression was achieved with RHIC/STAR data where ROOT compression managed only x1.4 [6].As a collaboration of experimental scientists, private industry, and the ROOT Team, our aim is to capitalize on the substantial success delivered by the initial effort and produce a robust technology properly packaged as an open-source tool that could be used by virtually every experiment around the world as means for improving data management and accessibility.In this contribution, we will present our efforts integrating our concepts of “functionally lossless compression” within the ROOT framework implementation, with the purpose of producing a basic solution readily integrated into HENP applications. We will also present our progress applying this compression through realistic examples of analysis from both the STAR and CMS experiments.

Canal, Ph.↗

Homomorphic data compression for real time photon correlation analysis

The construction of highly coherent X-ray sources, combined with next-generation detectors that are larger and faster, has enabled new research opportunities across the scientific landscape. Among the techniques that benefit most from these advancements is X-ray photon correlation spectroscopy (XPCS), where faster acquisition unlocks the ability to study faster dynamics within samples. However, faster acquisition on larger detectors also introduces unprecedented challenges for online data processing and offline data storage. Such challenges are particularly prominent for XPCS, where real time analyses require simultaneous calculation of all the previously acquired data in the time series. We present a homomorphic compression scheme to effectively reduce the computational time and memory space required for XPCS analysis. Leveraging similarities in the mathematical expression between a matrix-based compression algorithm and the correlation calculation, our approach allows direct operation on the compressed data without their decompression. The offline compression scheme extends storage capacity by a factor of 40 while preserving key features in the lossy compressed data. Meanwhile, the online compression scheme reduces the computational time to below 1 ms, enabling real time calculation of the correlation functions at kHz framerate. Our demonstration of a homomorphic compression of scientific data provides an effective solution to the big data challenge at coherent light sources. Beyond the example shown in this work, the framework can be extended to facilitate real-time operations directly on a compressed data stream for other techniques.

36 MATERIALS SCIENCE↗