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Results for “computer aided engineering”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 91 records · Page 5
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Dual Enhancement of Thermostability and Activity of Xylanase through Computer-Aided Rational Design

In the realm of enzyme engineering, the dual enhancement of thermostability and activity remains a challenge. Herein, we employed a computer-aided approach integrating folding free energy calculations and evolutionary analysis to engineer Paecilomyces thermophila xylanase into a hyperthermophilic enzyme for application in the paper and pulp industry. Through the computational rational design, XynM9 with superior thermostability and enhanced activity was designed. Its optimal reaction temperature increases by 10 °C to 85 °C, its T m increases by 10 °C to 93 °C, and its half-life increases 11-fold to 5.8 h. Additionally, its catalytic efficiency improves by 57% to 3926 s –1 mM –1 . Molecular dynamics simulations revealed that XynM9 is stabilized by more hydrogen bonds and salt bridges than wild-type xylanase. The mutant’s narrower catalytic cleft enhances the substrate-binding affinity, thus improving the catalytic efficiency. In harsh conditions at 80 °C and pH 10, using XynM9 significantly reduced both hemicellulose and lignin, which makes it a good candidate for use in the paper and pulp process. Finally, our study presents an accurate and efficient strategy for the dual enhancement of enzyme properties, guiding further improvement of computational tools for protein stabilization.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Physical Compact Model for Three-Terminal SONOS Synaptic Circuit Element

A well-posed physics-based compact model for a three-terminal silicon–oxide–nitride–oxide–silicon (SONOS) synaptic circuit element is presented for use by neuromorphic circuit/system engineers. Based on technology computer aided design (TCAD) simulations of a SONOS device, the model contains a nonvolatile memristor with the state variable QM representing the memristor charge under the gate of the three-terminal element. By incorporating the exponential dependence of the memristance on QM and the applied bias V for the gate, the compact model agrees quantitatively with the results from TCAD simulations as well as experimental measurements for the drain current. The compact model is implemented through VerilogA in the circuit simulation package Cadence Spectre and reproduces the experimental training behavior for the source–drain conductance of a SONOS device after applying writing pulses ranging from –12 V to +11 V, with an accuracy higher than 90%.

42 ENGINEERING↗
DOE OSTI2021

Assembly and Analysis of Cell-Scale Membrane Envelopes

The march toward exascale computing will enable routine molecular simulation of larger and more complex systems, for example, simulation of entire viral particles, on the scale of approximately billions of atoms-a simulation size commensurate with a small bacterial cell. Anticipating the future hardware capabilities that will enable this type of research and paralleling advances in experimental structural biology, efforts are currently underway to develop software tools, procedures, and workflows for constructing cell-scale structures. Herein, we describe our efforts in developing and implementing an efficient and robust workflow for construction of cell-scale membrane envelopes and embedding membrane proteins into them. A new approach for construction of massive membrane structures that are stable during the simulations is built on implementing a subtractive assembly technique coupled with the development of a structure concatenation tool (fastmerge), which eliminates overlapping elements based on volumetric criteria rather than adding successive molecules to the simulation system. Using this approach, we have constructed two "protocells" consisting of MARTINI coarse-grained beads to represent cellular membranes, one the size of a cellular organelle and another the size of a small bacterial cell. The membrane envelopes constructed here remain whole during the molecular dynamics simulations performed and exhibit water flux only through specific proteins, demonstrating the success of our methodology in creating tight cell-like membrane compartments. Extended simulations of these cell-scale structures highlight the propensity for nonspecific interactions between adjacent membrane proteins leading to the formation of protein microclusters on the cell surface, an insight uniquely enabled by the scale of the simulations. We anticipate that the experiences and best practices presented here will form the basis for the next generation of cell-scale models, which will begin to address the addition of soluble proteins, nucleic acids, and small molecules essential to the function of a cell.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2020

The Silver Lining

Clouds are shareable scientific instruments that create the potential for reproducibility by ensuring that all investigators have access to a common execution platform on which computational experiments can be repeated and compared. By virtue of the interface they present, they also lead to the creation of digital artifacts compatible with the cloud, such as images or orchestration templates, that go a long way-and sometimes all the way-to representing an experiment in a digital, repeatable form. In this article, I describe how we developed these natural advantages of clouds in the Chameleon testbed and argue that we should leverage them to create a digital research marketplace that would make repeating experiments as natural and viable part of research as sharing ideas via reading papers is today.

Cloud computing↗
DOE OSTI2014

Evolution of small-space plasma in a microthruster designed for small spacecraft

Plasma and gas particle dynamics in atmospheric pressure helium-filled small volume are investigated using a two-dimensional model. The model includes the conservation equations for the plasma and the neutral gas. In this paper, results are presented from simulation of the interaction between gas and charged species, which in turn causes heating and thrust generation for this microengine. Gas heating and neutral depletion initiations are observed, highlighting the close interaction between gas and charged species in governing the evolution of the small-space plasma inside a microthruster designed for microsatellites.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2019

Determining the Minimum Size of Cam Mechanisms

The dependence of the pressure angle on the angle of cam rotation is considered. Analytical methods are outlined for determining the minimum size of cam mechanisms with sliding and rocking shafts.

42 ENGINEERING↗
DOE OSTI2014

Integrated two-cylinder liquid piston Stirling engine

Heat engines utilizing the Stirling cycle may run on low temperature differentials with the capacity to function at high efficiency due to their near-reversible operation. However, current approaches to building Stirling engines are laborious and costly. Typically the components are assembled by hand and additional components require a corresponding increase in manufacturing complexity, akin to electronics before the integrated circuit. We present a simple and integrated approach to fabricating Stirling engines with precisely designed cylinders. We utilize computer aided design and one-step, planar machining to form all components of the engine. The engine utilizes liquid pistons and displacers to harness useful work from heat absorption and rejection. As a proof of principle of the integrated design, a two-cylinder engine is produced and characterized and liquid pumping is demonstrated.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2018

Management of Digital Equipment in Preproduction by Means of Uniform Numeric Control Language

The requirements on preproduction and the control software for various digital machining systems (numerically controlled machine tools, robot manipulators, additive manufacturing equipment) in flexible production are considered. By analysis of existing programming languages for digital equipment, UNCL (Uniform Numeric Control Language) has been developed for standard representation of control commands. The use of UNCL in verifying program operation on a machining simulator is considered. Software for the translation of control programs (specified in CLDATA formats and in ISO code) to the invariant format of the universal language is described. The postprocessing of control software from the universal language into programs in commonly used digital control systems is also considered.

42 ENGINEERING↗
DOE OSTI2019

Advancing Turbulent Spray and Combustion Models for Compression Ignition Engine Simulations

This thesis seeks to investigate the turbulent mixing influence on spray atomization and combustion processes encountered in compression ignition diesel engines. Despite greater thermal efficiency of diesel engine than spark ignition engine, the nature of stratified air-fuel mixture and non-premixed flame gives rise to unacceptable levels of nitrogen oxides (NOx) and particulate matter (PM), thus the use of diesel engines has often been limited to heavy-duty vehicle and industrial power sources. However, recent advancement in diesel engine combustion strategies, e.g. low temperature com-bustion (LTC), has demonstrated promising pathways towards improvement in the engine-out pollutants. Therefore, particularly in the effort of computer-aided en-gine design tasks, such a new engine design concept requires more accurate modeling techniques applicable over a broader range of engine operating conditions than those of conventional engine strategies. In the notion of challenges in new engine operat-ing conditions, this thesis aims to present successful implementation of improvement in numerical modeling techniques in high-pressure spray atomization and resulting turbulent spray flame of interest. Three-dimensional Computational Fluid Dynamics (CFD) in in-cylinder turbu-lent combustion is considered an integral part of engine design progress, but rather a cost-prohibitive to apply over a broad range of engine relevant conditions. In spite of successful use of existing spray atomization modeling, prior researchers have pointed out some degree of failure in LTC targeted injection strategies. Furthermore, finite rate and strong nonlinearity of chemistry influenced by local turbulent mixing still re-main in challenges to account for in cost-efficient CFD analysis. In this context, a new attempt of hybrid spray primary breakup modeling is presented and demonstrated in successful application aimed at LTC technique. In addition, the Representative Interactive Flamelets (RIF) model with aid of multi-flamelets approach is extensively assessed in terms of predictive capability against classical combustion model. The combustion model employed in this study are fully examined in the general diesel combustion metric, e.g., ignition delay and flame lift-off length as well as newly sug-gested test metric, combustion recession. The combustion recession has been recently idenfied, but still remain largely unknown. Since the governing physics of this phe-nomenon is characterized by turbulent mixing coupled with finite rate chemistry, this can be considered as a relevant test metric for turbulent combustion models. In ad-dition, very recent experimental studies have introduced a new non-sooting diesel combustion technique by manipulating direct injection method. The ducted fuel in-jection (DFI) has thus been demonstrated with its potential of low soot emissions. Knowing that the duct equipped ahead of injector nozzle was identifed to enhance turbulent mixing, investigations of DFI combustion may prove the effectiveness of turbulece-chemistry interaction modeling. This thesis presents comprehensive under-standings of aformentioned diesel combustion techniques in terms of several important physics keywords, e.g., turbulent mixing and detailed chemistry

33 ADVANCED PROPULSION SYSTEMS↗
DOE OSTI2018

Nuclear, Land marker for a Waste Isolation Site: International Architecture Competition - 18240

The design and construction of a nuclear waste marker must include many architectural considerations. Very little research has been conducted by architects to address this issue to date. Historically, the task of designating a nuclear waste site has been a discussion predominantly contained within the scientific and engineering communities. In an effort to engage architects within this dialogue, arch out loud hosted the NUCLEAR competition as an international, architectural investigation into the design of a nuclear waste site marker. The NUCLEAR competition asks participants to design a marker to designate the site of the Waste Isolation Pilot Plant (WIPP) located near Carlsbad, New Mexico. The marker will be meant to be a means of passive institutional controls (PICs) to deter inadvertent human intrusion upon the site and should last 10,000 years. The NUCLEAR competition defined the purpose of the nuclear waste site marker as a means to communicate the danger of inadvertent intrusion from future generations. The competition requires that entries must be both legible in communication and durable in their construction. The competition brief challenged participants to consider how customs and languages will evolve over time and to predict what motivations future generations might have for digging at the site. Other background information was provided about the site such as how waste was stored and how the unique geology of the site seals the waste. The 1993 Sandia National Laboratories report titled Expert Judgment on Markers to Deter Inadvertent Human Intrusion into the Waste Isolation Pilot Plant [1] was referenced along with the 1992 WIPP Land Withdrawal Act [2], interviews with WIPP scientists [3] involved with the WIPP PICs program and the Nuclear Energy Agency Records Knowledge and Memory working group. Competition participants were given digital 3-D Computer-Aided Design models for reference that included the underground storage portion of the site, existing buildings and the 16-square-mile site boundary identified in the 1992 WIPP Land Withdrawal Act [2]. This paper will: - Provide a detailed description of the submitted proposals including graphic analysis of the visualizations, diagrams, technical drawings, jury comments and statements. - Catalogue and identify the consistent themes within all submissions with possible categories including: 1) overall architectural form and language, 2) integration of written language and symbols within architecture, 3) use of technology and robotics, 4) construction methods and materials. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2022

Cross-kingdom expression of synthetic genetic elements promotes discovery of metabolites in the human microbiome

Small molecules encoded by biosynthetic pathways mediate cross-species interactions and harbor untapped potential, which has provided valuable compounds for medicine and biotechnology. Since studying biosynthetic gene clusters in their native context is often difficult, alternative efforts rely on heterologous expression, which is limited by host-specific metabolic capacity and regulation. Here, in this work, we describe a computational-experimental technology to redesign genes and their regulatory regions with hybrid elements for cross-species expression in Gram-negative and -positive bacteria and eukaryotes, decoupling biosynthetic capacity from host-range constraints to activate silenced pathways. These synthetic genetic elements enabled the discovery of a class of microbiome-derived nucleotide metabolites—tyrocitabines—from Lactobacillus iners. Tyrocitabines feature a remarkable orthoester-phosphate, inhibit translational activity, and invoke unexpected biosynthetic machinery, including a class of “Amadori synthases” and “abortive” tRNA synthetases. Our approach establishes a general strategy for the redesign, expression, mobilization, and characterization of genetic elements in diverse organisms and communities.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Automated Monitoring System for Self-Synchronizing Vibrational Drives

An automated monitoring system has been designed to maintain stable operation of self-synchronizing vibrational drives. By means of the system, information is collected and automatically processed. A built-in electrical feedback loop ensures synchronous drive operation.

42 ENGINEERING↗
DOE OSTI2018

CNC Module for Turning: A New CAM Application

The integrated CAM application for the KOMPAS-3D environment known as CNC Module for Turning is considered. This application permits automated development of control programs for numerically controlled lathes. The user may readily adapt the CAM application for specific production conditions and machine tools, thanks to features such as the following: representation of the cutting tools by means of parametric 3D models, the possibility of including fixed CNC cycles in the control programs, and the use of the Python language for programming of the postprocessors.

42 ENGINEERING↗