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At least 91 records · Page 5

Bloom Modeling and Prediction of the Harmful Algae Alexandrium in Bellingham Bay, WA

Bellingham, Washington is located near the American-Canadian border in the northwestern part of Washington state, and is bordered on its west side by the Lummi reservation. Between Lummi and Bellingham lies Bellingham bay, which has a history of harmful algae related closures dating back to 1978. The subject of this work is a genus of dinoflagellates: Alexandrium, within which many species have the capacity to produce a suite of toxins known as saxitoxin. These toxins bioaccumulate in bivalves, which in turn cause paralytic shellfish poisoning in marine consumers (mammals, birds, and fish), including humans. Symptoms in humans can range from tingling and numbness to difficulty or inability to breathe, resulting in death. Because of the longstanding history of shellfish gathering among Salish tribes and the fact that Washington is the leading U.S. producer of farmed bivalves, harmful algae blooms impact both native and non-native peoples living in the Salish Sea area negatively. The objective of this work is to identify factors which influence Alexandrium blooms in Bellingham Bay, as well as predict Alexandrium blooms in the future. The method of doing so involves two processes: an initial statistical modeling phase to find in situ and remote sensing observations correlated to bloom density (including, but not limited to: water temperature, chlorophyll-a, salinity, color dissolved organic matter, and discharge rate of local rivers), followed by use of that data as a training set for a recursive neural network. This predictive capacity may inform future closures, help ensure the safety of shellfish consumers, and act as a baseline for future modeling efforts in the region.

Harmful↗

The effect of aromatization on the isotopic compositions of hydrocarbons during early diagenesis

Polycyclic aromatic hydrocarbons with varying degrees of aromatization were isolated from the Eocene Messel Shale (Rheingraben, Germany). The high abundances of these compounds and their structural resemblances to cyclic triterpenoid lipids are consistent with derivation from microbial rather than thermal processes. Compounds structurally related to oleanane contain from five to nine double bonds; those within a series of aromatized hopanoids contain from three to nine. All are products of diagenetic reactions that remove hydrogen or methyl groups, and, in several cases, break carbon-carbon bonds to open rings. Aromatized products are on average depleted in 13C relative to possible precursors by l.2% (range: l.5% enrichment to 4% depletion, n = 9). The dependence of 13C content on the number of double bonds is not, however, statistically significant and it must be concluded that there is no strong evidence for isotopic fractionation accompanying diagenetic aromatization. Isotopic differences between series (structures related to ursane, des-A-ursane, des-A-lupane, des-A-arborane, and possibly, des-A-gammacerane are present) are much greater, indicating that 13C contents are controlled primarily by source effects. Fractionations due to chromatographic isotope effects during HPLC ranged from 0.1 to 2.8%.

NASA Discipline Exobiology↗

A novel random forest approach to revealing interactions and controls on chlorophyll concentration and bacterial communities during coastal phytoplankton blooms

Abstract Increasing occurrence of harmful algal blooms across the land–water interface poses significant risks to coastal ecosystem structure and human health. Defining significant drivers and their interactive impacts on blooms allows for more effective analysis and identification of specific conditions supporting phytoplankton growth. A novel iterative Random Forests (iRF) machine-learning model was developed and applied to two example cases along the California coast to identify key stable interactions: (1) phytoplankton abundance in response to various drivers due to coastal conditions and land-sea nutrient fluxes, (2) microbial community structure during algal blooms. In Example 1, watershed derived nutrients were identified as the least significant interacting variable associated with Monterey Bay phytoplankton abundance. In Example 2, through iRF analysis of field-based 16S OTU bacterial community and algae datasets, we independently found stable interactions of prokaryote abundance patterns associated with phytoplankton abundance that have been previously identified in laboratory-based studies. Our study represents the first iRF application to marine algal blooms that helps to identify ocean, microbial, and terrestrial conditions that are considered dominant causal factors on bloom dynamics.

59 BASIC BIOLOGICAL SCIENCES↗

Glycerol Is an Osmoprotectant in Two Antarctic Chlamydomonas Species From an Ice-Covered Saline Lake and Is Synthesized by an Unusual Bidomain Enzyme

Glycerol, a compatible solute, has previously been found to act as an osmoprotectant in some marine Chlamydomonas species and several species of Dunaliella from hypersaline ponds. Recently, Chlamydomonas reinhardtii and Dunaliella salina were shown to make glycerol with an unusual bidomain enzyme, which appears to be unique to algae, that contains a phosphoserine phosphatase and glycerol-3-phosphate dehydrogenase. Here we report that two psychrophilic species of Chlamydomonas (C. spp. UWO241 and ICE-MDV) from Lake Bonney, Antarctica also produce high levels of glycerol to survive in the lake’s saline waters. Glycerol concentration increased linearly with salinity and at 1.3 M NaCl, exceeded 400 mM in C. sp. UWO241, the more salt-tolerant strain. We also show that both species expressed several isoforms of the bidomain enzyme. An analysis of one of the isoforms of C. sp. UWO241 showed that it was strongly upregulated by NaCl and is thus the likely source of glycerol. These results reveal another adaptation of the Lake Bonney Chlamydomonas species that allow them to survive in an extreme polar environment.

59 BASIC BIOLOGICAL SCIENCES↗

Outdoor annual algae productivity improvements at the pre-pilot scale through crop rotation and pond operational management strategies

The Development of Integrated Screening, Cultivar Optimization, and Verification Research (DISCOVR) collaborative consortium operated pre-pilot scale outdoor ponds to deliver much-needed multi-year, long-term and consistent, algae cultivation data relevant to understanding the current state of technology in terms of expected seasonal algae biomass productivity. Over the course of four years from 2018 to 2021, twelve identical 4.2 m 2 mini-ponds were run in triplicate sets to test strains and operational strategies demonstrated in small-, indoor photobioreactors, in pursuit of increasing overall algae areal productivity and projected farm yield. Fourteen different cultivars derived from a strain screening pipeline were tested. Through deliberate seasonal crop rotation and improvements in operational strategies, annual biomass productivity increased from 11.6 to 17.6 g m -2 day -1 , a > 50% increase over the 2018 baseline. Both brackish and marine strains were included and four out of the fourteen strains consistently yielded high productivity across multiple years; brackish strains Monoraphidium minutum (26BAM) and Scenedesmus obliquus (UTEX393), and marine strains Tetraselmis striata (LANL1001) and Picochlorum celeri (TG2). These freely available datasets, which represent nearly complete annual daily coverage of cultivation metrics including weather, pond temperature and pH, nutrients, and productivity, are unique in the public domain and seek to fill agronomic and operational knowledge gaps to help in the eventual commercialization of algal biofuels and bioproducts.

09 BIOMASS FUELS↗

Analysis of laser fluorosensor systems for remote algae detection and quantification

The development and performance of single- and multiple-wavelength laser fluorosensor systems for use in the remote detection and quantification of algae are discussed. The appropriate equation for the fluorescence power received by a laser fluorosensor system is derived in detail. Experimental development of a single wavelength system and a four wavelength system, which selectively excites the algae contained in the four primary algal color groups, is reviewed, and test results are presented. A comprehensive error analysis is reported which evaluates the uncertainty in the remote determination of the chlorophyll a concentration contained in algae by single- and multiple-wavelength laser fluorosensor systems. Results of the error analysis indicate that the remote quantification of chlorophyll a by a laser fluorosensor system requires optimum excitation wavelength(s), remote measurement of marine attenuation coefficients, and supplemental instrumentation to reduce uncertainties in the algal fluorescence cross sections.

Browell, E. V.↗

Relative Impact of Sea Ice and Temperature Changes on Arctic Marine Production

We use a modern Earth system model to approximate the relative importance of ice versus temperature on Arctic marine ecosystem dynamics. We show that while the model adequately simulates ice volume, water temperature, air-sea CO 2 flux, and annual primary production in the Arctic, itunderestimates upper water column nitrate across the region. This nitrate bias is likely responsible for the apparent underestimation of ice algae production. Despite this shortcoming, the model appears to be a useful tool for exploring the impacts of environmental change on phytoplankton production and carbon dynamics over the Arctic Ocean. Our experiments indicate that under a warmer climate scenario, the percentage of ocean warming that could be apportioned to a reduction in ice area ranged from 11% to 100%, while decreasing ice area could account for 22–100% of the increase in annual ocean primary production. The change to CO2 air-sea flux in response to ice and temperature changes averaged an Arctic-wide 5.5 Tg C yr –1 (3.5%) increase, into the ocean. This increased carbon sink may be short-lived, as ice cover continues to decrease and the ocean warms. The change in carbon fixation from phytoplankton in response to increased temperatures and reduced ice was generally more than a magnitude larger than the changes to CO 2 flux, highlighting the importance of fully considering changes to the marine ecosystem when assessing Arctic carbon cycle dynamics. Our work demonstrates the importance of ice dynamics in controlling ocean warming and production and thus the need for well-behaved ice and BGC models within Earth system models if we hope to accurately predict Arctic changes.

54 ENVIRONMENTAL SCIENCES↗

Using commercial high-resolution satellite imagery to monitor a nuisance macroalga in the largest marine protected area in the U.S.A.

Satellite imagery is a useful tool for monitoring and mapping the distribution of invasive or nuisance algal species on coral reefs over the temporal and spatial scales needed for ecosystem management. Visual inspections of high-resolution satellite imagery were used to detect the newly discovered nuisance alga, Chondria tumulosa , at Manawai (Pearl and Hermes Atoll) in combination with ground-truthing surveys. Low-albedo (“dark”) survey sites on spur habitats were associated with mean C. tumulosa cover seven times higher than adjacent high-albedo (“light”) sites. There was an inverse relationship between C. tumulosa percent cover at ground-truthing sites and mean reflectance values. Archival satellite imagery showed that areas of high C. tumulosa cover (i.e., dark patches) were not evident on or before 2015 on the northeast backreef. This case study is the first to apply satellite imagery to target a nuisance red macroalgal bloom on a coral reef. The ability to use satellites for the detection of nuisance or invasive benthic species, such as expansive mats of C. tumulosa , provides managers with a valuable tool, especially in remote regions.

Invasive↗

A red algal polysaccharide influences the multicellular development of the choanoflagellate Salpingoeca rosetta

The choanoflagellate Salpingoeca rosetta exemplifies the capacity of marine microeukaryotes to integrate environmental cues into their life histories. Some of the cues that S. rosetta detects are lipids from their bacterial prey that induce the development of multicellular colonies called rosettes. In the aquatic environments where S. rosetta would encounter bacterial cues, microbial communities gain refuge and food from algae. For example, microbes in coastal environments benefit from macroalgae that annually release ∼10 14 g of carbon, primarily in the form of polysaccharides that comprise ∼80% of dissolved organic carbon in surface waters. Despite the ecological impact of algae and historical descriptions of choanoflagellates attached to algae, the influence of algae on choanoflagellate life history transitions has remained unexplored. Here, we report that porphyran, a polysaccharide produced by the red macroalga Porphyra umbilicalis, induces multicellular development in S. rosetta. We first noticed this response when S. rosetta formed multicellular rosette colonies while growing in media prepared from P. umbilicalis, even though rosette-inducing bacteria were absent. By biochemically purifying extracts of P. umbilicalis, we identified porphyran as the rosette-inducing factor. This response provides a biochemical insight that indicates algal polysaccharides may serve as cues to mediate associations between choanoflagellates and algae. Moreover, this observation complements evidence from environmental and geochemical studies that show the impact that algae have exerted on the ecology and evolution of eukaryotes, including a rise in algal productivity during the origin of animals, the closest living relatives of choanoflagellates.

59 BASIC BIOLOGICAL SCIENCES↗

Proterozoic and early Cambrian protists: evidence for accelerating evolutionary tempo

In rocks of late Paleoproterozoic and Mesoproterozoic age (ca. 1700-1000 million years ago), probable eukaryotic microfossils are widespread and well preserved, but assemblage and global diversities are low and turnover is slow. Near the Mesoproterozoic-Neoproterozoic boundary (1000 million years ago), red, green, and chromophytic algae diversified; molecular phylogenies suggest that this was part of a broader radiation of "higher" eukaryotic phyla. Observed diversity levels for protistan microfossils increased significantly at this time, as did turnover rates. Coincident with the Cambrian radiation of marine invertebrates, protistan microfossils again doubled in diversity and rates of turnover increased by an order of magnitude. Evidently, the Cambrian diversification of animals strongly influenced evolutionary rates, within clades already present in marine communities, implying an important role for ecology in fueling a Cambrian explosion that extends across kingdoms.

Non-NASA Center↗

Marine Circular Bioeconomy Workshop

Funds were used to support a Marine Circular Bioeconomy (MCB) Workshop. The purpose of the workshop was to explore the potential of marine macroalgae and microalgae production to meet the global climate, energy, and food challenges confronting society during the 21st century.

54 ENVIRONMENTAL SCIENCES↗

Biofouling and Corrosion Study for a Novel Linear Guided Wave Energy Converter (Post Access Report)

The overall objective of this project was to examine the reliability and performance of antibiofouling coatings used for a wave energy converter (WEC) developed by E-Wave Technologies. The particular coatings were selected for their low toxicity and potential compatibility with aquaculture. The aim of this work was to 1) test coating solutions to prevent biofouling growth and saltwater corrosion on the static (paddle and attachment frame surface) components of the WEC that are submerged, 2) determine adhesion of the coatings to system components, and 3) assess the ease and effectiveness of biofouling cleaning to insure long term performance of the system. An analysis of commercial coatings was performed using methods to examine the prevention of biofouling and coating adhesion properties on two key materials of the WEC, which were 316L low carbon marine grade stainless steel (SS) and Ultra High Molecular Weight Polyethylene (PE). Three marine antifouling paints were selected based on their unique properties to test how different paint styles perform on different materials. The selected paints were ePaint Ecominder self-polishing paint with Zinc Omadine for slime control, Pettit ECO HRT Copper-Free ablative antifouling with Econea biocide, and Intersleek 1100SR foul release. Pacific Northwest National Laboratory (PNNL) prepared PE and SS substrates coated with the three paints and compared the performance against uncoated substrates when submerged in raw seawater for 3-, 6-, and 9-month (m) time periods. Results in adhesion testing indicated that Pettit and ePaint materials clearly bonded strongly to SS, but did not bond comparably well to PE. It was noted during adhesion testing that the Intersleek surfaces were especially difficult to test as the paint highly resists bonding to the epoxy adhesives used with the adherence testing platform. The wear rate of the coatings was not measured under this study; however, based on adhesion testing, coatings in the sliding regions of the Ewave device are expected to wear rapidly. Sandia National Laboratories (SNL) evaluated the adhesion of three different paints to PE and SS substrates which were exposed to a marine environment for time intervals of 0, 3, 6, and 9 months. From qualitative visual analysis of the 3 in2 coupons when pulled from the tank, the 3 in2 coupons generally only appeared to have biofouling consisting of filamentous algae or diatoms, which all have relatively low mass and can be easily wiped from the surface of coupons. Qualitative visual analysis indicated that ECO HRT and Unpainted were consistently worse than Intersleek and Ecominder at all time points. Results provide insight to aid with down-selection of commercial coatings under static conditions to support reliability of the WEC and potential maintenance schedules. This investigation was conducted using small coupon samples suspended in seawater and the development of testing rigs for dynamic component level testing is needed for future work. In addition, the potential toxicity of these commercial coatings on aquaculture has not been determined by this study. One recommendation is to conduct toxicity investigations at the Environmental Toxicity Laboratory at Oak Ridge National Laboratory.

16 TIDAL AND WAVE POWER↗

Polysaccharide niche partitioning of distinct Polaribacter clades during North Sea spring algal blooms

Massive releases of organic substrates during marine algal blooms trigger growth of many clades of heterotrophic bacteria. Algal polysaccharides represent the most diverse and structurally complex class of these substrates, yet their role in shaping the microbial community composition is poorly understood. We investigated, whether polysaccharide utilization capabilities contribute to niche differentiation of Polaribacter spp. (class Flavobacteriia; known to include relevant polysaccharidedegraders) that were abundant during 2009–2012 spring algal blooms in the southern North Sea. We identified six distinct Polaribacter clades using phylogenetic and phylogenomic analyses, quantified their abundances via fluorescence in situ hybridization, compared metagenome-assembled genomes, and assessed in situ gene expression using metaproteomics. Four clades with distinct polysaccharide niches were dominating. Polaribacter 2-a comprised typical first responders featuring small genomes with limited polysaccharide utilization capacities. Polaribacter 3-a were abundant only in 2010 and possessed a distinct sulfated α-glucoronomannan degradation potential. Polaribacter 3-b responded late in blooms and had the capacity to utilize sulfated xylan. Polaribacter 1-a featured high numbers of glycan degradation genes and were particularly abundant following Chattonella algae blooms. These results support the hypothesis that sympatric Polaribacter clades occupy distinct glycan niches during North Sea spring algal blooms.

59 BASIC BIOLOGICAL SCIENCES↗

OMEGA (Offshore Membrane for Enclosing Algae). NASA-NAVY: A Strategic Planning Discussion

This briefing packet provides a short introduction to OMEGA and a truncated version of our project approach, with an example of the kind of work break down structure (WBS) used to guide our Phase I activities. It is meant to give you an impression of how we are approaching the challenge of creating the world's first marine photobioreactor (PBR) that will scale to address the strategic energy problems confronting the United States and the world. Some of our conceptual PBR designs and plans for logistics are included to communicate the path we have taken. We have also included an aerial photograph of the experimental tanks we are using at the Cal Fish and Game, followed by concluding remarks. The overarching purpose of the strategic planning discussion in Norfolk is to establish the relationship between the NASA OMEGA Team and the Navy, to unite the strengths of both agencies, and to map a mutual way forward along the project's established critical path.

Trent, Jonathan↗

Development of the high-productivity marine microalga, Picochlorum renovo , as a photosynthetic protein secretion platform

Microalgae are remarkable in their ability to convert CO 2 and sunlight into renewable biomass and bioproducts. In this work, we have established a novel photosynthetic protein production platform via computational prediction and genetic engineering using native microalgal protein secretory signal peptides to achieve functional secretion of the fluorescent protein mCherry. Importantly, this work was conducted in the recently characterized alga Picochlorum renovo, an alga of industrial interest due to its rapid growth rate, tolerance to both high temperature and salinity, and genetically tractable nuclear and chloroplast genomes. Genomic queries allowed the identification of native secretory signal peptides, which were N-terminally fused to mCherry allowing for secretion into the culture supernatant. Further characterization revealed no impact on fitness, a production rate of 0.19 mg/L/day, and titer of 0.37 mg/L of transgenic mCherry protein in culture supernatant. These findings lay the foundation for applied genetic engineering approaches that could enable CO 2 -sequestering, sustainable photoproduction of industrially relevant enzymes at low cost.

59 BASIC BIOLOGICAL SCIENCES↗