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DOE OSTI2024

The hidden roots of wetland methane emissions

Abstract Wetlands are the largest natural source of methane (CH 4 ) globally. Climate and land use change are expected to alter CH 4 emissions but current and future wetland CH 4 budgets remain uncertain. One important predictor of wetland CH 4 flux, plants, play an important role in providing substrates for CH 4 ‐producing microbes, increasing CH 4 consumption by oxygenating the rhizosphere, and transporting CH 4 from soils to the atmosphere. Yet, there remain various mechanistic knowledge gaps regarding the extent to which plant root systems and their traits influence wetland CH 4 emissions. Here, we present a novel conceptual framework of the relationships between a range of root traits and CH 4 processes in wetlands. Based on a literature review, we propose four main CH 4 ‐relevant categories of root function: gas transport, carbon substrate provision, physicochemical influences and root system architecture. Within these categories, we discuss how individual root traits influence CH 4 production, consumption, and transport (PCT). Our findings reveal knowledge gaps concerning trait functions in physicochemical influences, and the role of mycorrhizae and temporal root dynamics in PCT. We also identify priority research needs such as integrating trait measurements from different root function categories, measuring root‐CH 4 linkages along environmental gradients, and following standardized root ecology protocols and vocabularies. Thus, our conceptual framework identifies relevant belowground plant traits that will help improve wetland CH 4 predictions and reduce uncertainties in current and future wetland CH 4 budgets.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Orphaned oil and gas well methane emission rates quantified using Gaussian plume inversions of ambient observations

Abstract. Annually, ∼ 3.6 million abandoned oil and gas wells in the US emit a combined ∼ 2.6 Tg methane (CH4), adversely affecting climate and regional air quality. However, these estimates depend on emission factors derived from measuring subpopulations of wells that vary by orders of magnitude due to very limited field sampling and poorly characterized distributions. Currently, US protocols to remediate orphaned wells lacks standardized quantification methods needed to both prioritize plugging and account for emission reductions. Therefore, sensitive, reliable, affordable, and scalable CH4 flux quantification methods are needed. We report the use of a simple Gaussian plume method where the dispersion parameters are constrained by in situ ground measurements of CH4 concentration at four locations 7.5–49 m downwind of the orphan well as well as local winds to estimate the leak rate from an orphan well. We derive a flux of 10.53 ± 1.16 kg CH4 h−1 during a venting procedure in April 2023 that agrees with the directly measured volumetric flow rate of 9.00 ± 0.25 kg CH4 h−1. This is 71 % greater than the 5.3 kg CH4 h−1 flux measured 7 months prior. Additionally, we discovered a secondary leak through the surface casing inferred as 0.43–0.67 kg CH4 h−1 both by our ground Gaussian analysis and by transecting the plume with an uncrewed aerial system (UAS). We show that in situ determination of the dispersion parameters used in our Gaussian inversions allows us to measure methane emissions to 15 % accuracy, significantly reducing errors when compared to the standard practice of assuming stability class. Our results help develop simpler methods and protocols for robust orphan well emission quantification that can be used for reporting.

Follansbee, Emily↗
DOE OSTI2024

A Lake Biogeochemistry Model for Global Methane Emissions: Model Development, Site‐Level Validation, and Global Applicability

Abstract Lakes are important sentinels of climate change and may contribute over 30% of natural methane (CH 4 ) emissions; however, no earth system model (ESM) has represented lake CH 4 dynamics. To fill this gap, we refined a process‐based lake biogeochemical model to simulate global lake CH 4 emissions, including representation of lake bathymetry, oxic methane production (OMP), the effect of water level on ebullition, new non‐linear CH 4 oxidation kinetics, and the coupling of sediment carbon pools with in‐lake primary production and terrigenous carbon loadings. We compiled a lake CH 4 data set for model validation. The model shows promising performance in capturing the seasonal and inter‐annual variabilities of CH 4 emissions at 10 representative lakes for different lake types and the variations in mean annual CH 4 emissions among 106 lakes across the globe. The model reproduces the variations of the observed surface CH 4 diffusion and ebullition along the gradients of lake latitude, depth, and surface area. The results suggest that OMP could play an important role in surface CH 4 diffusion, and its relative importance is higher in less productive and/or deeper lakes. The model performance is improved for capturing CH 4 outgassing events in non‐floodplain lakes and the seasonal variability of CH 4 ebullition in floodplain lakes by representing the effect of water level on ebullition. The model can be integrated into ESMs to constrain global lake CH 4 emissions and climate‐CH 4 feedback.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2026

Machine-learning-based estimates of global natural vegetated wetland methane emissions (2000–2025)

Wetlands are the largest natural source of atmospheric methane (CH 4 ), yet comprehensive global budgets are typically delayed by years, preventing a timely understanding of CH 4 sources, sinks, and trends. To reduce this delay, we present a model emulator-driven framework and accompanying workflow that enable timely, continuous emission updates using a machine-learning emulator to reconstruct spatially explicit monthly emission fields at 1° × 1° resolution. We apply this framework to a global dataset of natural vegetated wetland CH 4 emissions to extend the most recent Global Methane Budget (GMB; Saunois et al., 2025) record that covers the 2000–2020 emissions through 2025. In the test data (∼ 30 % of the total dataset), the emulator achieved a global R 2 of 0.65 ± 0.003 (mean ± 95 % CI, hereafter) and an RMSE of 5.49 ± 0.12×10 -3 Tg CH 4 yr −1 . The emulator is trained on 35 GMB model estimates, including 22 process-based models and 13 atmospheric inversions, paired with 10 ensemble realizations of 11 gridded climate predictor variables from atmospheric reanalyses. Our results show that the global mean predicted wetland CH 4 emissions for 2021–2025 (157.8 ± 2.4 Tg CH 4 yr −1 ) are not significantly higher (∼ 0.05 Tg CH 4 yr −1 ) than the 2000–2020 baseline. However, this stability masks a significant hemispheric redistribution of emissions. We detect an increase in Northern Hemisphere (NH) emissions in 2021–2025, with mid- and high-latitudes increasing by 0.76 ± 0.07 and 0.35 ± 0.03 Tg CH 4 yr −1 , respectively, while the tropics and Southern Hemisphere (SH) extratropics show offsetting negative trends (−0.95 ± 0.19 and -0.11 ± 0.02 Tg CH 4 yr −1 , respectively). The predicted emissions are able to capture the low emissions in 2023 in South America linked to El Niño-related drought, as reported by recent studies (Ciais et al., 2026; Quinn et al., 2025). Furthermore, we identify a distinct seasonal amplification of global emission trends that peaks in late boreal summer. This new modeled dataset and operational framework bridge the gap between the latest updated budgets and low-latency monitoring, providing a scalable capacity to frequently update global emission estimates and critical early warnings of regional wetland feedback loops. The data are publicly available at https://doi.org/10.5281/zenodo.18870108 (Li et al., 2026).

Li, Mengze [National University of Singapore (Sing↗
DOE OSTI2021

Analysis of Oil and Gas Ethane and Methane Emissions in the Southcentral and Eastern United States Using Four Seasons of Continuous Aircraft Ethane Measurements

In the last decade, much work has been done to better understand methane (CH 4 ) emissions from the oil and gas (O&G) industry in the United States. Ethane (C 2 H 6 ), a gas that is co-emitted with thermogenic sources of CH 4 , is emitted in the US predominantly by the O&G sector. Here, in this study, we perform an inverse analysis on 200 h of atmospheric boundary layer C 2 H 6 measurements to estimate C 2 H 6 emissions from the US O&G sector. Measurements were collected from 2017 to 2019 as part of the Atmospheric Carbon and Transport (ACT) America aircraft campaign and encompass much of the central and eastern United States. We find that for the fall, winter, and spring campaigns, C 2 H 6 data consistently exceeds values that would be expected based on EPA O&G leak rate estimates by more than 50%. C 2 H 6 observations from the summer 2019 data set show significantly lower C 2 H 6 enhancements in the southcentral region that cannot be reconciled with data from the other three seasons, either due to complex meteorological conditions or a temporal shift in the emissions. Combining the fall, winter, and spring C 2 H 6 posterior emissions estimate to an inventory of O&G CH 4 emissions, we estimate that O&G CH 4 emissions are larger than EPA inventory values by 48%–76%. Uncertainties in the gas composition data limit the accuracy of using C 2 H 6 as a proxy for O&G CH 4 emissions. These limits could be resolved retroactively by increasing the availability of industry-collected gas composition data.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Air temperature and precipitation constraining the modelled wetland methane emissions in a boreal region in northern Europe

Wetland methane responses to temperature and precipitation are studied in a boreal wetland-rich region in northern Europe using ecosystem process models. Six ecosystem models (JSBACH-HIMMELI, LPX-Bern, LPJ-GUESS, JULES, CLM4.5, and CLM5) are compared to multi-model means of ecosystem models and atmospheric inversions from the Global Carbon Project and upscaled eddy covariance flux results for their temperature and precipitation responses and seasonal cycles of the regional fluxes. Two models with contrasting response patterns, LPX-Bern and JSBACH-HIMMELI, are used as priors in atmospheric inversions with Carbon Tracker Europe–CH4 (CTE-CH4) in order to find out how the assimilation of atmospheric concentration data changes the flux estimates and how this alters the interpretation of the flux responses to temperature and precipitation. Inversion moves wetland emissions of both models towards co-limitation by temperature and precipitation. Between 2000 and 2018, periods of high temperature and/or high precipitation often resulted in increased emissions. However, the dry summer of 2018 did not result in increased emissions despite the high temperatures. The process models show strong temperature and strong precipitation responses for the region (51 %–91 % of the variance explained by both). The month with the highest emissions varies from May to September among the models. However, multi-model means, inversions, and upscaled eddy covariance flux observations agree on the month of maximum emissions and are co-limited by temperature and precipitation. The setup of different emission components (peatland emissions, mineral land fluxes) has an important role in building up the response patterns. Considering the significant differences among the models, it is essential to pay more attention to the regional representation of wet and dry mineral soils and periodic flooding which contribute to the seasonality and magnitude of methane fluxes. The realistic representation of temperature dependence of the peat soil fluxes is also important. Furthermore, it is important to use process-based descriptions for both mineral and peat soil fluxes to simulate the flux responses to climate drivers.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

A new biogeochemical modelling framework (FLaMe-v1.0) for lake methane emissions on the regional scale: development and application to the European domain

This study presents a new physical-biogeochemical modelling framework for simulating lake methane (CH 4 ) emissions at regional scales. The new model, FLaMe-v1.0 (Fluxes of Lake Methane), rests on an innovative, computationally efficient lake clustering approach that enables the simulation of CH 4 emissions across a large number of lakes. Building on the Canadian Small Lake Model (CSLM) that simulates the lake physics, we develop a suite of biogeochemical modules to simulate transient dynamics of organic Carbon (C), Oxygen (O 2 ), and CH 4 . We first test the performance of FLaMe-v1.0 by analyzing physical and biogeochemical processes in two theoretical lakes with characteristics that can be considered representative for many lakes (an oligotrophic, deep lake driven by cold climate versus a eutrophic, shallow lake driven by warm climate). Next, we evaluate the model by comparing simulated and observed timeseries of CH 4 emissions in four well-surveyed lakes. We then apply FLaMe-v1.0 at the European scale to evaluate simulated diffusive and ebullitive lake CH 4 fluxes against in-situ measurements in both boreal and central European regions. Finally, we provide a first assessment of the spatio-temporal variability in CH 4 emissions from European lakes with a surface area comprised between 0.1–1000 km 2 (n= 108 407, total area = 1.33 × 105 km 2 ), indicating a total emission of 0.97 ± 0.23 Tg CH 4 yr −1 , with the uncertainty constrained by combining FLaMe-v1.0 and machine learning techniques. Moreover, 30 % and 70 % of these CH 4 emissions are through diffusive and ebullitive pathways, respectively. Annually averaged CH 4 emission rates per unit lake area during 2010–2016 have a South-to-North decreasing gradient, resulting in a mean over the European domain as 7.39 g CH 4 m −2 yr −1 . Our simulations reveal a strong seasonality (with ice-blocking effects accounted for) in European lake CH 4 emissions, with nearly ten times higher emissions during late summer than during winter. This pronounced seasonal variation highlights the importance of accounting for the sub-annual variability in CH 4 emissions to accurately constrain regional CH 4 budgets. In the future, FLaMe-v1.0 could be embedded into Earth System Models to investigate the feedback between climate warming and global lake CH 4 emissions.

Maisonnier, Manon [Free Univ. of Brussels (Belgium↗
DOE OSTI2021

Dairy Methane Emissions in California's San Joaquin Valley Inferred With Ground‐Based Remote Sensing Observations in the Summer and Winter

Abstract The dairy industry in the San Joaquin Valley (SJV) is one of California’s largest methane (CH 4 ) sources. Reducing dairy emissions is a priority for the state’s climate change plans. Observations of current dairy CH 4 emissions are key to monitoring actions taken toward this goal. To help support this, we present new ground‐based measurements of atmospheric column‐averaged CH 4 mixing ratio (XCH 4 ) gradients across a group of 600 dairies in the central SJV using EM27/SUN solar spectrometers. We used measurements from the 2019 summer and 2020 winter seasons for a top‐down emission inversion based on the WRF‐STILT model. Our top‐down estimates of the region’s dairy emissions range from 90% to 183% of the current CALGEM inventory’s emissions of 277 Gg/yr. In contrast to the strong temperature dependence found by earlier dairy CH 4 emission studies, we also find that our top‐down emissions during the winter measurement days are comparable to the summer measurement days, possibly due to seasonal changes in dairy management practices and meteorological conditions. Furthermore, we find significant interday variability in our measurements and find that our emission estimates overlap with earlier top‐down studies and bottom‐up inventories in this region. Our study demonstrates how analysis of ground‐based remotely sensed CH 4 gradient observations can help improve our understanding of CH 4 sources at scales relevant to mitigation policy. It also reflects the need for long‐term monitoring of CH 4 emissions in the region and at individual facilities to better understand their emissions.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

Methane emission hotspots in a boreal forest-fen mosaic potentially linked to deep taliks

Permafrost thaw is transforming boreal forests into mosaics of wetlands and drier uplands. Topographic controls on hydrological and ecological conditions impact methane (CH 4 ) fluxes, contributing to uncertainty in local and regional CH 4 budgets and underlying drivers. The objective of this study was to explore CH 4 fluxes and their drivers in a transitioning boreal forest-fen ecosystem (Goldstream Valley, Alaska, USA). This landscape is characterized by thawing discontinuous permafrost and heterogeneous mosaics of fens, collapse-scar channels, and small mounds of permafrost soils. From a survey in July 2021, observed chamber CH4 fluxes included fen areas with intermediate to very high emissions (29.8–635.3 mg CH 4 m −2 d −1 ), clustered locations with CH 4 uptake (−2.11 to −0.7 mg CH 4 m −2 d −1 ), and three anomalous emission hotspots (342.4–772.4 mg CH 4 m −2 d −1 ) that were located near samples with lower emissions. Some surface and near-surface variables partially explained the spatial variation in CH 4 flux. Log-transformed CH 4 flux had a positive linear relationship with soil moisture at 20 cm depth ( R 2 = 0.31, p -value < 1e-5) and negative linear relationships with microtopography ( R 2 = 0.13, p -value < 0.006) and slope ( R 2 = 0.28, p -value < 2e-5). Methane emissions generally occurred in flat, wet, graminoid-dominated fens, whereas CH 4 uptake occurred on permafrost mounds dominated by feather mosses and woody vegetation. However, the CH 4 hotspots occurred on drier, slightly sloped locations with low or undetectable near-surface methanogen abundance, suggesting that CH 4 was produced in deeper soils. When the hotspot samples were omitted, log-transformed CH 4 flux had a positive linear relationship with near-surface methanogen abundance ( R 2 = 0.29, p -value = 0.0023), and stronger linear relationships with soil moisture, slope, and soil macronutrient concentrations. Our findings suggest that some CH 4 emission hotspots could arise from CH 4 in deep taliks. The inference that methanogenesis occurs in deep taliks was strengthened by the identification of intrapermafrost taliks across the study area using low-frequency geophysical induction. This study assesses surface spatial heterogeneity in the context of subsurface permafrost conditions and highlights the complexity of CH 4 flux patterns in transitioning forest-wetland ecosystems. To better inform regional CH 4 budgets, further research is needed to understand the spatial distribution of terrestrial CH 4 hotspots and to resolve their surface, near-surface, and subsurface drivers.

boreal↗
DOE OSTI2023

Oxygen priming induced by elevated CO 2 reduces carbon accumulation and methane emissions in coastal wetlands

Warming temperatures and elevated carbon dioxide (CO 2 ) are inextricably linked global change phenomena, but are rarely manipulated together in field experiments. As a result, ecosystem-level responses to these interacting facets of global change remain poorly understood. In 2017, we started an experiment in a coastal wetland that crosses warming and elevated CO 2 , to better understand how the interactions of these factors affect the plants, biogeochemistry, and overall survival of these ecosystems. However, contrary to our expectations, when elevated CO 2 is combined with warming, the wetland accumulated less carbon, making it more vulnerable to sea-level rise. This was due to the plants transporting more oxygen into the soil, which stimulated aerobic decomposition. At the same time, the increased supply of oxygen reduced net methane (CH 4 ) emissions from the system, even though warming alone substantially increased CH 4 emission. Together, these results demonstrate that ecosystem responses to interacting facets of global change may be mediated by plant traits that regulate the soil environment. Thus, plant responses are critical for predicting future ecosystem survival and climate feedbacks.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Biogeochemical and plant trait mechanisms drive enhanced methane emissions in response to whole-ecosystem warming

Abstract. Climate warming perturbs ecosystem carbon (C) cycling, causing both positive and negative feedbacks on greenhouse gas emissions. In 2016, we began a tidal marsh field experiment in two vegetation communities to investigate the mechanisms by which whole-ecosystem warming alters C gain, via plant-driven sequestration in soils, and C loss, primarily via methane (CH4) emissions. Here, we report the results from the first 4 years. As expected, warming of 5.1 ∘C more than doubled CH4 emissions in both plant communities. We propose this was caused by a combination of four mechanisms: (i) a decrease in the proportion of CH4 consumed by CH4 oxidation, (ii) more C substrates available for methanogenesis, (iii) reduced competition between methanogens and sulfate-reducing bacteria, and (iv) indirect effects of plant traits. Plots dominated by Spartina patens consistently emitted more CH4 than plots dominated by Schoenoplectus americanus, indicating key differences in the roles these common wetland plants play in affecting anaerobic soil biogeochemistry and suggesting that plant composition can modulate coastal wetland responses to climate change.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Climate Sensitivity of Peatland Methane Emissions Mediated by Seasonal Hydrologic Dynamics

Peatlands are among the largest natural sources of atmospheric methane (CH 4 ) worldwide. Peatland emissions are projected to increase under climate change, as rising temperatures and shifting precipitation accelerate microbial metabolic pathways favorable for CH 4 production. However, how these changing environmental factors will impact peatland emissions over the long term remains unknown. Here, we investigate a novel data set spanning an exceptionally long 11 years to analyze the influence of soil temperature and water table elevation on peatland CH 4 emissions. We show that higher water tables dampen the springtime increases in CH 4 emissions as well as their subsequent decreases during late summer to fall. These results imply that any hydroclimatological changes in northern peatlands that shift seasonal water availability from winter to summer will increase annual CH 4 emissions, even if temperature remains unchanged. Furthermore, advancing hydrological understanding in peatland watersheds will be crucial for improving predictions of CH 4 emissions.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Upscaling Wetland Methane Emissions From the FLUXNET–CH4 Eddy Covariance Network (UpCH4 v1.0): Model Development, Network Assessment, and Budget Comparison

Wetlands are responsible for 20%–31% of global methane (CH 4 ) emissions and account for a large source of uncertainty in the global CH 4 budget. Data-driven upscaling of CH 4 fluxes from eddy covariance measurements can provide new and independent bottom-up estimates of wetland CH 4 emissions. Here, we develop a six-predictor random forest upscaling model (UpCH4), trained on 119 site-years of eddy covariance CH 4 flux data from 43 freshwater wetland sites in the FLUXNET-CH4 Community Product. Network patterns in site-level annual means and mean seasonal cycles of CH 4 fluxes were reproduced accurately in tundra, boreal, and temperate regions (Nash-Sutcliffe Efficiency ~0.52–0.63 and 0.53). UpCH4 estimated annual global wetland CH 4 emissions of 146 ± 43 TgCH 4 y –1 for 2001–2018 which agrees closely with current bottom-up land surface models (102–181 TgCH 4 y –1 ) and overlaps with top-down atmospheric inversion models (155–200 TgCH 4 y –1 ). However, UpCH4 diverged from both types of models in the spatial pattern and seasonal dynamics of tropical wetland emissions. We conclude that upscaling of eddy covariance CH 4 fluxes has the potential to produce realistic extra-tropical wetland CH 4 emissions estimates which will improve with more flux data. To reduce uncertainty in upscaled estimates, researchers could prioritize new wetland flux sites along humid-to-arid tropical climate gradients, from major rainforest basins (Congo, Amazon, and SE Asia), into monsoon (Bangladesh and India) and savannah regions (African Sahel) and be paired with improved knowledge of wetland extent seasonal dynamics in these regions.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Much stronger tundra methane emissions during autumn-freeze than spring-thaw

Warming in the Arctic has been more apparent in the non-growing season than in the typical growing season. In this context, methane (CH 4 ) emissions in the non-growing season, particularly in the shoulder seasons, account for a substantial proportion of the annual budget. However, CH 4 emissions in spring and autumn shoulders are often underestimated by land models and measurements due to limited data availability and unknown mechanisms. This study investigates CH 4 emissions during spring thaw and autumn freeze using eddy covariance CH 4 measurements from three Arctic sites with multi-year observations. We find that the shoulder seasons contribute to about a quarter (25.6±2.3%, mean ± standard deviation) of annual total CH 4 emissions. Our study highlights the three to four times higher contribution of autumn freeze CH 4 emission to total annual emission than that of spring thaw. Autumn freeze exhibits significantly higher CH 4 flux (0.88±0.03 mg m -2 h -1 ) than spring thaw (0.48±0.04 mg m -2 h -1 ). The mean duration of autumn freeze (58.94±26.39 days) is significantly longer than that of spring thaw (20.94±7.79 days), which predominates the much higher cumulative CH 4 emission during autumn freeze (1212.31±280.39 mg m -2 yr -1 ) than that during spring thaw (307.39±46.11 mg m -2 yr -1 ). Near-surface soil temperatures cannot completely reflect the freeze-thaw processes in deeper soil layers and appears to have a hysteresis effect on CH 4 emissions from early spring thaw to late autumn freeze. Therefore, it is necessary to consider commonalities and differences in CH 4 emissions during spring thaw versus autumn freeze to accurately estimate CH 4 source from tundra ecosystems for evaluating carbon-climate feedback in Arctic.

54 ENVIRONMENTAL SCIENCES↗