Unravelling the role of transient redox partner complexes in P450 electron transfer mechanics
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Background: Weakly bound and unbound nuclei close to particle drip lines are laboratories of new nuclear structure physics at the extremes of neutron/proton excess. The comprehensive description of these systems requires an open quantum system framework that is capable of treating resonant and nonresonant many-body states on equal footing. Purpose: In this work, we develop the complex-energy configuration interaction approach to describe binding energies and spectra of selected 5 ≤ $\textit{A}$ ≤ 11 nuclei. Method: We employ the complex-energy Gamow shell model (GSM) assuming a rigid 4 He core. The effective Hamiltonian, consisting of a core-nucleon Woods-Saxon potential and a simplified version of the Furutani-Horiuchi-Tamagaki interaction with the mass-dependent scaling, is optimized in the $\textit{sp}$ space. To diagonalize the Hamiltonian matrix, we employ the Davidson method and the Density Matrix Renormalization Group technique. Results: We report our optimized GSM Hamiltonian offers a good reproduction of binding energies and spectra with the root-mean-square (rms) deviation from experiment of 160 keV. Since the model performs well when used to predict known excitations that have not been included in the fit, it can serve as a reliable tool to describe poorly known states. A case in point is our prediction for the pair of unbound mirror nuclei 10 Li – 10 N in which a huge Thomas-Ehrman shift dramatically alters the pattern of low-energy excitations. Conclusion: The new model will enable comprehensive studies of structure and reactions aspects of light drip-line nuclei.
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The exploration of critical phenomena in phase transitions of strongly interacting matter governed by quantum chromodynamics (QCD) is one of the goals of present ultrarelativistic heavy-ion collision experiments at BNL and CERN. The key research direction is to locate the putative critical point on the phase diagram of QCD linked to the chiral symmetry restoration at finite temperature and/or density. One of the main theoretical tools used for this purpose is the fluctuations of conserved charges, such as the net-baryon number. However, due to experimental limitations, analyses of heavy-ion collision data suffer from a very doubtful basing of the net-proton number being a proxy for the total net-baryon number fluctuations. In this work, we use the parity doublet model to investigate the fluctuations of the net-baryon number density in hot and dense hadronic matter. The model accounts for chiral criticality within the mean-field approximation. We focus on the qualitative properties and systematics of the first- and second-order susceptibility of the net-baryon number density, and their ratios for nucleons of positive and negative parity, as well as their correlator. We show that the fluctuations of the positive-parity nucleon do not necessarily reflect the fluctuations of the total net-baryon number density at the phase boundary of the chiral phase transition. We also investigate the nontrivial structure of the correlator. Furthermore, we discuss and quantify the differences between the fluctuations of the net-baryon number density in the vicinity of the chiral and liquid-gas phase transition in nuclear matter. We indicate a possible relevance of our results with the interpretation of the experimental data on net-proton number fluctuations in heavy-ion collisions. Published by the American Physical Society 2024
A combined amplitude analysis is performed for the decays $B^0$ → $\overline{D}$ 0 $D_s^+$$π^–$ and $B^+$ → $D^–$$D_s^+$$π^+$, which are related by isospin symmetry. The analysis is based on data collected by the LHCb detector in proton-proton collisions at center-of-mass energies of 7, 8, and 13 TeV. The full data sample corresponds to an integrated luminosity of 9 fb –1 . Two new resonant states with masses of 2.908 ± 0.011 ± 0.020 GeV and widths of 0.136 ± 0.023 ± 0.013 GeV are observed, which decay to $D_s^+$$π^+$ and $D_s^+$$π^–$ respectively. The former state indicates the first observation of a doubly charged open-charm tetraquark state with minimal quark content [c$\overline{s}$u$\overline{d}$], and the latter state is a neutral tetraquark composed of [c$\overline{s}$$\overline{u}$d] quarks. Both states are found to have spin-parity of 0 + , and their resonant parameters are consistent with each other, which suggests that they belong to an isospin triplet.
SUMMARY Drought is a major environmental stress that severely affects plant growth and crop productivity. FRIGIDA ( FRI ) is a key regulator of flowering time and drought tolerance in model plants. However, little is known regarding its functions in woody plants, including citrus. Thus, we explored the functional role of the citrus FRI ortholog ( CiFRI ) under drought. Drought treatment induced CiFRI expression. CiFRI overexpression enhanced drought tolerance in transgenic Arabidopsis and citrus, while CiFRI suppression increased drought susceptibility in citrus. Moreover, transcriptomic profiling under drought conditions suggested that CiFRI overexpression altered the expression of numerous genes involved in the stress response, hormone biosynthesis, and signal transduction. Mechanistic studies revealed that citrus dehydrin likely protects CiFRI from stress‐induced degradation, thereby enhancing plant drought tolerance. In addition, a citrus brassinazole‐resistant (BZR) transcription factor family member ( CiBZR1 ) directly binds to the CiFRI promoter to activate its expression under drought conditions. CiBZR1 also enhanced drought tolerance in transgenic Arabidopsis and citrus. These findings further our understanding of the molecular mechanisms underlying the CiFRI ‐mediated drought stress response in citrus.
RNase P can use either an RNA- or a protein-based active site to catalyze 5'-maturation of transfer RNAs (tRNAs). This distinctive attribute in the biocatalytic repertoire raises questions about the underlying evolutionary driving forces, especially if each variant somehow affords a selective advantage under certain conditions. Upon mining all publicly available prokaryotic genomes and examining gene co-occurrence, we discovered that an RNA ligase with circularization activity was significantly overrepresented in genomes that contain the protein form of RNase P. This unexpected linkage inspires testable ideas to understand the bases for scenarios that might favor RNase P variants of different architectures/make-up.
A search is presented for $\tau$ slepton pairs produced in proton-proton collisions at a center-of-mass energy of 13 TeV. The search is carried out in events containing two $\tau$ leptons in the final state, on the assumption that each $\tau$ slepton decays primarily to a $\tau$ lepton and a neutralino. Events are considered in which each $\tau$ lepton decays to one or more hadrons and a neutrino, or in which one of the $\tau$ leptons decays instead to an electron or a muon and two neutrinos. The data, collected with the CMS detector in 2016 and 2017, correspond to an integrated luminosity of 77.2 fb$^{-1}$. The observed data are consistent with the standard model background expectation. The results are used to set 95% confidence level upper limits on the cross section for $\tau$ slepton pair production in various models for $\tau$ slepton masses between 90 and 200 GeV and neutralino masses of 1, 10, and 20 GeV. In the case of purely left-handed $\tau$ slepton production and decay to a $\tau$ lepton and a neutralino with a mass of 1 GeV, the strongest limit is obtained for a $\tau$ slepton mass of 125 GeV at a factor of 1.14 larger than the theoretical cross section.
A combination of searches for top squark pair production using proton–proton collision data at a center-of-mass energy of 13$\,\text {Te}\text {V}$ at the CERN LHC, corresponding to an integrated luminosity of 137$\,\text {fb}^{-1}$ collected by the CMS experiment, is presented. Signatures with at least 2 jets and large missing transverse momentum are categorized into events with 0, 1, or 2 leptons. New results for regions of parameter space where the kinematical properties of top squark pair production and top quark pair production are very similar are presented. Depending on the model, the combined result excludes a top squark mass up to 1325$\,\text {Ge}\text {V}$ for a massless neutralino, and a neutralino mass up to 700$\,\text {Ge}\text {V}$ for a top squark mass of 1150$\,\text {Ge}\text {V}$. Top squarks with masses from 145 to 295$\,\text {Ge}\text {V}$, for neutralino masses from 0 to 100$\,\text {Ge}\text {V}$, with a mass difference between the top squark and the neutralino in a window of 30$\,\text {Ge}\text {V}$ around the mass of the top quark, are excluded for the first time with CMS data. The results of theses searches are also interpreted in an alternative signal model of dark matter production via a spin-0 mediator in association with a top quark pair. Upper limits are set on the cross section for mediator particle masses of up to 420$\,\text {Ge}\text {V}$.
Microbial communities have vital roles in systems essential to human health and agriculture, such as gut and soil microbiomes, and there is growing interest in engineering designer consortia for applications in biotechnology ( e . g ., personalized probiotics, bioproduction of high-value products, biosensing). The capacity to monitor and model metabolite exchange in dynamic microbial consortia can provide foundational information important to understand the community level behaviors that emerge, a requirement for building novel consortia. Where experimental approaches for monitoring metabolic exchange are technologically challenging, computational tools can enable greater access to the fate of both chemicals and microbes within a consortium. In this study, we developed an in-silico model of a synthetic microbial consortia of sucrose-secreting Synechococcus elongatus PCC 7942 and Escherichia coli W. Our model was built on the NUFEB framework for Individual-based Modeling (IbM) and optimized for biological accuracy using experimental data. We showed that the relative level of sucrose secretion regulates not only the steady-state support for heterotrophic biomass, but also the temporal dynamics of consortia growth. In order to determine the importance of spatial organization within the consortium, we fit a regression model to spatial data and used it to accurately predict colony fitness. We found that some of the critical parameters for fitness prediction were inter-colony distance, initial biomass, induction level, and distance from the center of the simulation volume. We anticipate that the synergy between experimental and computational approaches will improve our ability to design consortia with novel function.
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The COVID-19 pandemic is causing many challenges for manufacturers, especially those that depend on workers whose jobs cannot be performed remotely. This has detrimentally impacted the energy management workforce, energy support system performance, as well as operations and supply chains.This article discusses four primary challenges for industrial energy management caused by the pandemic, strained budget for energy projects, increased energy intensity caused by low production rates and other safety practices, limited access to energy systems, and the lost knowledge and experience of senior staff. This article also proposes some potential solutions for these challenges that include implementing no- and low-cost energy conservation measures, adopting alternative financing options, improving shutdown procedures, reducing baseloads, creating an effective online energy-monitoring system, performing virtual energy assessments, building a robust EnMS, and attending online and in-person training events.