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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 91 records · Page 5

Insect taste receptors relevant to host identification by recognition of secondary metabolite patterns of non-host plants

Highlights: • Three putative bitter gustatory receptor of silkworm respond to several secondary metabolites in non-host plants. • Secondary metabolites responsive to the gustatory receptor are representative feeding-deterrents in non-host plants. • One feeding-deterrent gustatory receptor respond to multiple feeding deterrents. • Feeding deterrent receptors are expressed in silkworm mouthparts. • Representative secondary metabolite of a non-host plant, coumarin exactly had a suppressive effect on food intake of silkworm. The taste sensing system is crucial for food recognition in insects and other animals. It is commonly believed that insect gustatory receptors (Grs) expressed in gustatory organs are indispensable for host plant selection. Many behavioral studies have shown that mono- or oligo-phagous lepidopteran insects use the balance between feeding attractants and feeding deterrents in host plants and that these are sensed by taste organs for host plant recognition. However, the molecular mechanism underlying taste recognition, especially of feeding deterrents, remains to be elucidated. To better understand this mechanism, we studied orphan Grs, including Bombyx mori Gr (BmGr) 16, BmGr18, and BmGr53, from the mono-phagous insect, Bombyx mori. Using Calcium imaging in mammalian cells, we first confirmed in lepidoptera insects that three of the putative bitter Grs widely responded to structurally different feeding deterrents. Although the phylogenetic distance of these Grs was considerable, they responded to partially overlapping deterrents of plant secondary metabolites. These findings suggest that not only these three Grs but also most of the Grs that have been assigned to putative bitter Grs are feeding-deterrent receptors that play a role in host plant recognition.

60 APPLIED LIFE SCIENCES↗

Structural analysis of substrate recognition by glucose isomerase in Mn2+ binding mode at M2 site in S. rubiginosus

Highlights: • A snapshot of metal binding at the SruGI M2 site in the presence of Mn{sup 2+}. • Metal binding at the M2 site elicits a configuration change at the M1 site. • Glucose molecule can only bind to the M1 site in presence of Mn{sup 2+} at the M2 site. • Two-step sequential process for SruGI substrate recognition, in Mn{sup 2+} at M2 site mode. Glucose isomerase (GI) catalyzes the reversible enzymatic isomerization of d-glucose and d-xylose to d-fructose and d-xylulose, respectively. This is one of the most important enzymes in the production of high-fructose corn syrup (HFCS) and biofuel. We recently determined the crystal structure of GI from S. rubiginosus (SruGI) complexed with a xylitol inhibitor in one metal binding mode. Although we assessed inhibitor binding at the M1 site, the metal binding at the M2 site and the substrate recognition mechanism for SruGI remains the unclear. Here, we report the crystal structure of the two metal binding modes of SruGI and its complex with glucose. This study provides a snapshot of metal binding at the SruGI M2 site in the presence of Mn{sup 2+}, but not in the presence of Mg{sup 2+}. Metal binding at the M2 site elicits a configuration change at the M1 site. Glucose molecule can only bind to the M1 site in presence of Mn{sup 2+} at the M2 site. Glucose and Mn{sup 2+} at the M2 site were bridged by water molecules using a hydrogen bonding network. The metal binding geometry of the M2 site indicates a distorted octahedral coordination with an angle of 55–110°, whereas the M1 site has a relatively stable octahedral coordination with an angle of 85–95°. We suggest a two-step sequential process for SruGI substrate recognition, in Mn{sup 2+} binding mode, at the M2 site. Our results provide a better understanding of the molecular role of the M2 site in GI substrate recognition.

60 APPLIED LIFE SCIENCES↗

Structural basis of glycan276-dependent recognition by HIV-1 broadly neutralizing antibodies

Recognition of N-linked glycan at residue N276 (glycan276) at the periphery of the CD4-binding site (CD4bs) on the HIV-envelope trimer is a formidable challenge for many CD4bs-directed antibodies. To understand how this glycan can be recognized, here we isolate two lineages of glycan276-dependent CD4bs antibodies. Antibody CH540-VRC40.01 (named for donor-lineage.clone) neutralizes 81% of a panel of 208 diverse strains, while antibody CH314-VRC33.01 neutralizes 45%. Cryo-electron microscopy (cryo-EM) structures of these two antibodies and 179NC75, a previously identified glycan276-dependent CD4bs antibody, in complex with HIV-envelope trimer reveal substantially different modes of glycan276 recognition. Despite these differences, binding of glycan276-dependent antibodies maintains a glycan276 conformation similar to that observed in the absence of glycan276-binding antibodies. By contrast, glycan276-independent CD4bs antibodies, such as VRC01, displace glycan276 upon binding. These results provide a foundation for understanding antibody recognition of glycan276 and suggest its presence may be crucial for priming immunogens seeking to initiate broad CD4bs recognition.

59 BASIC BIOLOGICAL SCIENCES↗

When your cap matters: structural insights into self vs non-self recognition of 5' RNA by immunomodulatory host proteins

Cytosolic recognition of viral RNA is important for host innate immune responses. Differential recognition of self vs non-self RNA is a considerable challenge as the inability to differentiate may trigger aberrant immune responses. Recent work identified the composition of the RNA 5', including the 5' cap and its methylation state, as an important determinant of recognition by the host. Furthermore, recent studies have advanced our understanding of the modified 5' RNA recognition and viral antagonism of RNA receptors. Here, we will discuss RIG-I and IFIT proteins as examples of host proteins that detect dsRNA and ssRNA, respectively.

59 BASIC BIOLOGICAL SCIENCES↗

Effects of Postmortem Decomposition on Face Recognition

Although viable tools are available for the identification of unknown deceased individuals, recognition rates with these methods are greatly impacted by the degree to which decomposition has occurred. Therefore, identifying highly decomposed remains poses a major challenge. This paper analyzes the effect of facial decomposition on the recognition rates of several facial recognition commercial-off-theshelf systems and research-grade systems, as well as algorithms contained in a custom recognition library. The custom dataset of facial images used in the experiment is composed of 42 subjects at stages of decomposition rangingfrom recently deceased to later stages where the soft tissues are severely decomposed and facial features are deformed. It is shown that an algorithm’s ability to correctly detect a decomposing face is a crucial first step that not all face models can accurately handle. However, some of the evaluated Convolution Neural Network (CNN)–inspired methods provide promising results even in cases of severely decomposed faces.

Cornett, David↗

Molecular basis of P[II] major human rotavirus VP8* domain recognition of histo-blood group antigens

Initial cell attachment of rotavirus (RV) to specific cell surface glycan receptors, which is the essential first step in RV infection, is mediated by the VP8* domain of the spike protein VP4. Recently, human histo-blood group antigens (HBGAs) have been identified as receptors or attachment factors for human RV strains. RV strains in the P[4] and P[8] genotypes of the P[II] genogroup share common recognition of the Lewis b (Le b ) and H type 1 antigens, however, the molecular basis of receptor recognition by the major human P[8] RVs remains unknown due to lack of experimental structural information. Here, we used nuclear magnetic resonance (NMR) spectroscopy-based titration experiments and NMR-derived high ambiguity driven docking (HADDOCK) methods to elucidate the molecular basis for P[8] VP8* recognition of the Leb (LNDFH I) and type 1 HBGAs. We also used X-ray crystallography to determine the molecular details underlying P[6] recognition of H type 1 HBGAs. Unlike P[6]/P[19] VP8*s that recognize H type 1 HBGAs in a binding surface composed of an α-helix and a β-sheet, referred as the “βα binding site”, the P[8] and P[4] VP8*s bind Le b HBGAs in a previously undescribed pocket formed by the edges of two β-sheets, referred to as the “ββ binding site”. Importantly, the P[8] and P[4] VP8*s retain binding capability to non-Le b type 1 HBGAs using the βα binding site. The presence of two distinct binding sites for Le b and non-Le b HBGA glycans in the P[8] and P[4] VP8* domains suggests host-pathogen co-evolution under structural and functional adaptation of RV pathogens to host glycan polymorphisms. Assessment and understanding of the precise impact of this co-evolutionary process in determining RV host ranges and cross-species RV transmission should facilitate improved RV vaccine development and prediction of future RV strain emergence and epidemics.

59 BASIC BIOLOGICAL SCIENCES↗

Individual recognition between mother and infant bats (Myotis)

The recognition process and the basis for that recognition, in brown bats, between mother and infant are analyzed. Two parameters, ultrasonic communication and olfactory stimuli, are investigated. The test animals were not allowed any visual contact. It was concluded that individual recognition between mother and infant occurred. However, it could not be determined if the recognition was based on ultrasonic signals or olfactory stimuli.

Turner, D.↗

Layered 'recognition cone' networks that pre-process, classify, and describe.

Discussion of pattern recognition programs for input data preprocessing with simultaneous or subsequent characterization, or characterization into a 'recognition cone,' or description and naming, interrelated descriptions, and conversion. A computer program is described that transforms and characterizes the input through the successive layers of a recognition cone. The program can choose and put forth names of parts of the input scene. It combines pieces of a description into interrelated wholes by using n-tuple characterizers and conducts a simple and stylized conversation about what it has seen. The technique of combining recognition cones with preprocessing transformations and characterizations is expected to contribute to technology in this field.

Uhr, L.↗

Terrain type recognition using ERTS-1 MSS images

For the automatic recognition of earth resources from ERTS-1 digital tapes, both multispectral and spatial pattern recognition techniques are important. Recognition of terrain types is based on spatial signatures that become evident by processing small portions of an image through selected algorithms. An investigation of spatial signatures that are applicable to ERTS-1 MSS images is described. Artifacts in the spatial signatures seem to be related to the multispectral scanner. A method for suppressing such artifacts is presented. Finally, results of terrain type recognition for one ERTS-1 image are presented.

Gramenopoulos, N.↗

Studies of recognition with multitemporal remote sensor data

Characteristics of multitemporal data and their use in recognition processing were investigated. Principal emphasis was on satellite data collected by the LANDSAT multispectral scanner and on temporal changes throughout a growing season. The effects of spatial misregistration on recognition performance with multitemporal data were examined. A capability to compute probabilities of detection and false alarm was developed and used with simulated distributions for misregistered pixels. Wheat detection was found to be degraded and false alarms increased by misregistration effects. Multitemporal signature characteristics and multitemporal recognition processing were studied to gain insights into problems associated with this approach and possible improvements. Recognition performance with one multitemporal data set displayed marked improvements over results from single-time data.

Malila, W. A.↗

Pattern recognition in the satellite temperature retrieval problem

Pattern recognition procedures have been developed in order to improve the first-guess fields for satellite temperature retrievals. The first procedure is used to select one or more historical radiosonde temperature profiles as analog estimates of ambient thermal structure. The second procedure is used to organize a priori data into shape-coherent pattern libraries using structural information inherent in the data itself. On the basis of independent tests of about 800 temperature retrievals, it was found that: (1) the pattern recognition techniques reduced first-guess profile errors by nearly 50 percent in comparison with traditional partitioning schemes; and (2) with regression and physical-iterative retrieval algorithms, however, the effect of pattern recognition on temperature retrieval error was insignificant. Analysis of individual retrieval errors showed that poor retrievals may outweigh the potential benefits of both pattern recognition techniques.

Thompson, O. E.↗

Digital and optical shape representation and pattern recognition; Proceedings of the Meeting, Orlando, FL, Apr. 4-6, 1988

The present conference discusses topics in pattern-recognition correlator architectures, digital stereo systems, geometric image transformations and their applications, topics in pattern recognition, filter algorithms, object detection and classification, shape representation techniques, and model-based object recognition methods. Attention is given to edge-enhancement preprocessing using liquid crystal TVs, massively-parallel optical data base management, three-dimensional sensing with polar exponential sensor arrays, the optical processing of imaging spectrometer data, hybrid associative memories and metric data models, the representation of shape primitives in neural networks, and the Monte Carlo estimation of moment invariants for pattern recognition.

Juday, Richard D.↗

Advances in image compression and automatic target recognition; Proceedings of the Meeting, Orlando, FL, Mar. 30, 31, 1989

Various papers on image compression and automatic target recognition are presented. Individual topics addressed include: target cluster detection in cluttered SAR imagery, model-based target recognition using laser radar imagery, Smart Sensor front-end processor for feature extraction of images, object attitude estimation and tracking from a single video sensor, symmetry detection in human vision, analysis of high resolution aerial images for object detection, obscured object recognition for an ATR application, neural networks for adaptive shape tracking, statistical mechanics and pattern recognition, detection of cylinders in aerial range images, moving object tracking using local windows, new transform method for image data compression, quad-tree product vector quantization of images, predictive trellis encoding of imagery, reduced generalized chain code for contour description, compact architecture for a real-time vision system, use of human visibility functions in segmentation coding, color texture analysis and synthesis using Gibbs random fields.

Tescher, Andrew G.↗

Self-amplified optical pattern-recognition technique

A self-amplified optical pattern-recognition technique that utilizes a photorefractive crystal as a real-time volume holographic filter with recording accomplished by means of laser beams of proper polarization and geometric configuration is described. After the holographic filter is recorded, it can be addressed with extremely weak object beams and an even weaker reference beam to obtain a pattern-recognition signal. Because of beam-coupling energy transfer from the input object beam to the diffracted beam, the recognition signal is greatly amplified. Experimental results of this technique using BaTiO3 crystal show that 5 orders of magnitude of amplification of a recognition signal can be obtained.

Liu, Hua-Kuang↗

Three-dimensional object recognition using similar triangles and decision trees

A system, TRIDEC, that is capable of distinguishing between a set of objects despite changes in the objects' positions in the input field, their size, or their rotational orientation in 3D space is described. TRIDEC combines very simple yet effective features with the classification capabilities of inductive decision tree methods. The feature vector is a list of all similar triangles defined by connecting all combinations of three pixels in a coarse coded 127 x 127 pixel input field. The classification is accomplished by building a decision tree using the information provided from a limited number of translated, scaled, and rotated samples. Simulation results are presented which show that TRIDEC achieves 94 percent recognition accuracy in the 2D invariant object recognition domain and 98 percent recognition accuracy in the 3D invariant object recognition domain after training on only a small sample of transformed views of the objects.

Spirkovska, Lilly↗

Automatic speech recognition research at NASA-Ames Research Center

A trainable acoustic pattern recognizer manufactured by Scope Electronics is presented. The voice command system VCS encodes speech by sampling 16 bandpass filters with center frequencies in the range from 200 to 5000 Hz. Variations in speaking rate are compensated for by a compression algorithm that subdivides each utterance into eight subintervals in such a way that the amount of spectral change within each subinterval is the same. The recorded filter values within each subinterval are then reduced to a 15-bit representation, giving a 120-bit encoding for each utterance. The VCS incorporates a simple recognition algorithm that utilizes five training samples of each word in a vocabulary of up to 24 words. The recognition rate of approximately 85 percent correct for untrained speakers and 94 percent correct for trained speakers was not considered adequate for flight systems use. Therefore, the built-in recognition algorithm was disabled, and the VCS was modified to transmit 120-bit encodings to an external computer for recognition.

Coler, Clayton R.↗

A strip chart recorder pattern recognition tool kit for Shuttle operations

During Space Shuttle operations, Mission Control personnel monitor numerous mission-critical systems such as electrical power; guidance, navigation, and control; and propulsion by means of paper strip chart recorders. For example, electrical power controllers monitor strip chart recorder pen traces to identify onboard electrical equipment activations and deactivations. Recent developments in pattern recognition technologies coupled with new capabilities that distribute real-time Shuttle telemetry data to engineering workstations make it possible to develop computer applications that perform some of the low-level monitoring now performed by controllers. The number of opportunities for such applications suggests a need to build a pattern recognition tool kit to reduce software development effort through software reuse. We are building pattern recognition applications while keeping such a tool kit in mind. We demonstrated the initial prototype application, which identifies electrical equipment activations, during three recent Shuttle flights. This prototype was developed to test the viability of the basic system architecture, to evaluate the performance of several pattern recognition techniques including those based on cross-correlation, neural networks, and statistical methods, to understand the interplay between an advanced automation application and human controllers to enhance utility, and to identify capabilities needed in a more general-purpose tool kit.

Hammen, David G.↗

Method and apparatus for obtaining complete speech signals for speech recognition applications

The present invention relates to a method and apparatus for obtaining complete speech signals for speech recognition applications. In one embodiment, the method continuously records an audio stream comprising a sequence of frames to a circular buffer. When a user command to commence or terminate speech recognition is received, the method obtains a number of frames of the audio stream occurring before or after the user command in order to identify an augmented audio signal for speech recognition processing. In further embodiments, the method analyzes the augmented audio signal in order to locate starting and ending speech endpoints that bound at least a portion of speech to be processed for recognition. At least one of the speech endpoints is located using a Hidden Markov Model.

Abrash, Victor↗