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At least 91 records · Page 5

Soil moisture thresholds explain a shift from light-limited to water-limited sap velocity in the Central Amazon during the 2015–16 El Niño drought

Transpiration is often considered to be light- but not water-limited in humid tropical rainforests due to abundant soil water, even during the dry seasons. The record-breaking 2015–16 El Niño drought provided a unique opportunity to examine whether transpiration is constrained by water under severe lack of rainfall. We measured sap velocity, soil water content, and meteorological variables in an old-growth upland forest in the Central Amazon throughout the 2015–16 drought. We found a rapid decline in sap velocity (-38 ± 21%, mean ± SD.) and in its temporal variability (-88%) during the drought compared to the wet season. Such changes were accompanied by a marked decline in soil moisture and an increase in temperature and vapor pressure deficit. Sap velocity was largely limited by net radiation during the wet and normal dry seasons; however, it shifted to be primarily limited by soil moisture during the drought. The threshold in which sap velocity became dominated by soil moisture was at 0.33 m 3 m -3 (around -150 kPa in soil matric potential), below which sap velocity dropped steeply. Our study provides evidence for a soil water threshold on transpiration in a moist tropical forest, suggesting a shift from light limitation to water limitation under future climate characterized by increased temperature and an increased frequency, intensity, duration and extent of extreme drought events.

54 ENVIRONMENTAL SCIENCES↗

Dry Season Transpiration and Soil Water Dynamics in the Central Amazon

With current observations and future projections of more intense and frequent droughts in the tropics, understanding the impact that extensive dry periods may have on tree and ecosystem-level transpiration and concurrent carbon uptake has become increasingly important. Here, we investigate paired soil and tree water extraction dynamics in an old-growth upland forest in central Amazonia during the 2018 dry season. Tree water use was assessed via radial patterns of sap flow in eight dominant canopy trees, each a different species with a range in diameter, height, and wood density. Paired multi-sensor soil moisture probes used to quantify volumetric water content dynamics and soil water extraction within the upper 100 cm were installed adjacent to six of those trees. To link depth-specific water extraction patterns to root distribution, fine root biomass was assessed through the soil profile to 235 cm. To scale tree water use to the plot level (stand transpiration), basal area was measured for all trees within a 5 m radius around each soil moisture probe. The sensitivity of tree transpiration to reduced precipitation varied by tree, with some increasing and some decreasing in water use during the dry period. Tree-level water use scaled with sapwood area, from 11 to 190 L per day. Stand level water use, based on multiple plots encompassing sap flow and adjacent trees, varied from ∼1.7 to 3.3 mm per day, increasing linearly with plot basal area. Soil water extraction was dependent on root biomass, which was dense at the surface (i.e., 45% in the upper 5 cm) and declined dramatically with depth. As the dry season progressed and the upper soil dried, soil water extraction shifted to deeper levels and model projections suggest that much of the water used during the month-long dry-down could be extracted from the upper 2–3 m. Results indicate variation in rates of soil water extraction across the research area and, temporally, through the soil profile. These results provide key information on whole-tree contributions to transpiration by canopy trees as water availability changes. In addition, information on simultaneous stand level dynamics of soil water extraction that can inform mechanistic models that project tropical forest response to drought.

54 ENVIRONMENTAL SCIENCES↗

Deforestation-induced climate change reduces carbon storage in remaining tropical forests

Abstract Biophysical effects from deforestation have the potential to amplify carbon losses but are often neglected in carbon accounting systems. Here we use both Earth system model simulations and satellite–derived estimates of aboveground biomass to assess losses of vegetation carbon caused by the influence of tropical deforestation on regional climate across different continents. In the Amazon, warming and drying arising from deforestation result in an additional 5.1 ± 3.7% loss of aboveground biomass. Biophysical effects also amplify carbon losses in the Congo (3.8 ± 2.5%) but do not lead to significant additional carbon losses in tropical Asia due to its high levels of annual mean precipitation. These findings indicate that tropical forests may be undervalued in carbon accounting systems that neglect climate feedbacks from surface biophysical changes and that the positive carbon–climate feedback from deforestation-driven climate change is higher than the feedback originating from fossil fuel emissions.

54 ENVIRONMENTAL SCIENCES↗

Time series methods for the analysis of soundscapes and other cyclical ecological data

Biodiversity monitoring has entered an era of ‘big data’, exemplified by a near-continuous collection of sounds, images, chemical and other signals from organisms in diverse ecosystems. Such data streams have the potential to help identify new threats, assess the effectiveness of conservation interventions, as well as generate new ecological insights. However, appropriate analytical methods are often still missing, particularly with respect to characterizing cyclical temporal patterns. Here, we present a framework for characterizing and analysing ecological responses that represent nonstationary, complex temporal patterns and demonstrate the value of using Fourier transforms to decorrelate continuous data points. In our example, we use a framework based on three approaches (spectral analysis, magnitude squared coherence, and principal component analysis) to characterize differences in tropical forest soundscapes within and across sites and seasons in Gabon. By reconstructing the underlying, cyclic behaviour of the soundscape for each site, we show how one can identify circadian patterns in acoustic activity. Soundscapes in the dry season had a complex diel cycle, requiring multiple harmonics to represent daily variation, while in the wet season there was less variance attributable to the daily cyclic patterns. Our framework can be applied to most continuous, or near-continuous ecological data collected at a fine temporal resolution, allowing ecologists to explore patterns of temporal autocorrelation at multiple levels for biologically meaningful trends. Such methods will become indispensable as biological big data are used to understand the impact of anthropogenic pressures on biodiversity and to inform efforts to mitigate them.

54 ENVIRONMENTAL SCIENCES↗

Carbon content of soil fractions varies with season, rainfall, and soil fertility across a lowland tropical moist forest gradient

Tropical forests contain some of the largest soil carbon (C) stocks on Earth, making them broadly relevant to terrestrial-climate feedbacks, yet our understanding of how their soil organic C (SOC) fractions vary over space and time is limited. We studied effects of season, fertility, and mean annual precipitation (MAP) on the C contents of soil fractions across 14 lowland forests in Panama. We measured free-debris, occluded-debris, and mineral-associated SOC fractions, as well as soluble C associated with each fraction. We hypothesized that mineral-associated SOC would be greatest in infertile, strongly weathered soils with large reactive mineral contents. We also hypothesized that the debris SOC fractions would accumulate during the dry season, reflecting seasonal increases in litterfall. To address this, we compared soil fractions in wet and dry seasons from fertile and infertile soils across a range of 1809 – 2864 mm MAP. The C content (mg C / g soil) of all soil fractions varied with fertility and MAP: specifically, free-debris SOC was greatest in wet, high-fertility soils, and occluded-debris SOC was greater in high-fertility than low-fertility soils. The mineral-associated SOC fraction, which contained the majority of bulk soil C, showed increasing C content with greater MAP in infertile sites, presumably driving similar spatial patterns in the bulk soil. Only the free-debris SOC fraction showed strong seasonal variation, increasing in mass during the dry season. Nitrogen behaved similarly to C. In summary, soil C contents increased with MAP in infertile sites but not fertile sites, driven by the mineral-associated SOC fraction. The dry season had greater free-debris SOC, but this seasonal trend was not apparent in bulk soil C, likely because of the small size of the free-debris SOC fraction. Furthermore, changes in the quantity and seasonality of precipitation, which are projected for tropical forests, might shift spatial and temporal patterns of soil C storage, which would in turn influence forest-climate feedbacks for this C-rich biome.

54 ENVIRONMENTAL SCIENCES↗

A Bornean Peat Swamp Forest is a Net Source of Carbon Dioxide to the Atmosphere

Tropical peat forests are a globally important reservoir of carbon, but little is known about CO2 exchange on an annual basis. We measured CO2 exchange between the atmosphere and tropical peat swamp forest in Sarawak, Malaysia using the eddy covariance technique over 4 years from 2011 to 2014. The CO2 fluxes varied between seasons and years. A small carbon uptake took place during the rainy season at the beginning of 2011, while a substantial net efflux of >600 g C/m2 occurred over a 2 month period in the middle of the dry season. Conversely, the peat ecosystem was a source of carbon during both the dry and rainy seasons in subsequent years and more carbon was lost during the rainy season relative to the dry season. Our results demonstrate that the forest was a net source of CO2 to the atmosphere during every year of measurement with annual efflux ranging from 183 to 632 g C m−2 year−1, noting that annual flux values were sensitive to gap filling methodology. This is in contrast to the typical view of tropical peat forests which must have acted as net C sinks over time scales of centuries to millennia to create the peat deposits. Path analyses revealed that the gross primary productivity (GPP) and ecosystem respiration (RE) were primarily affected by vapour pressure deficit (VPD). Results suggest that future increases in VPD could further reduce the C sink strength and result in additional net CO2 losses from this tropical peat swamp forest in the absence of plant acclimation to such changes in atmospheric dryness.

Borneo↗

Net Primary Production of Terrestrial Ecosystems from 2000 to 2009

The CASA (Carnegie-Ames-Stanford) ecosystem model has been used to estimate monthly carbon fluxes in terrestrial ecosystems from 2000 to 2009, with global data inputs from NASA's Terra Moderate Resolution Imaging Spectroradiometer (MODIS) vegetation cover mapping. Net primary production (NPP) flux for atmospheric carbon dioxide has varied slightly from year-to-year, but was predicted to have increased over short multi-year periods in the regions of the high-latitude Northern Hemisphere, South Asia, Central Africa, and the western Amazon since the year 2000. These CASA results for global NPP were found to be in contrast to other recently published modeling trends for terrestrial NPP with high sensitivity to regional drying patterns. Nonetheless, periodic declines in regional NPP were predicted by CASA for the southern and western Untied States, the southern Amazon, and southern and eastern Africa. NPP in tropical forest zones was examined in greater detail to discover lower annual production values than previously reported in many global models across the tropical rainforest zones, likely due to the enhanced detection of lower production ecosystems replacing primary rainforest.

Terrestiral ecosystems↗

Constraining long‐term model predictions for woody growth using tropical tree rings

The strength and persistence of the tropical carbon sink hinges on the long-term responses of woody growth to climatic variations and increasing CO 2 . However, the sensitivity of tropical woody growth to these environmental changes is poorly understood, leading to large uncertainties in growth predictions. Here, we used tree ring records from a Southeast Asian tropical forest to constrain ED2.2-hydro, a terrestrial biosphere model with explicit vegetation demography. Specifically, we assessed individual-level woody growth responses to historical climate variability and increases in atmospheric CO 2 (C a ). When forced with historical C a , ED2.2-hydro reproduced the magnitude of increases in intercellular CO 2 concentration (a major determinant of photosynthesis) estimated from tree ring carbon isotope records. In contrast, simulated growth trends were considerably larger than those obtained from tree rings, suggesting that woody biomass production efficiency (WBPE = woody biomass production:gross primary productivity) was overestimated by the model. The estimated WBPE decline under increasing C a based on model-data discrepancy was comparable to or stronger than (depending on tree species and size) the observed WBPE changes from a multi-year mature-forest CO 2 fertilization experiment. In addition, we found that ED2.2-hydro generally overestimated climatic sensitivity of woody growth, especially for late-successional plant functional types. The model-data discrepancy in growth sensitivity to climate was likely caused by underestimating WBPE in hot and dry years due to commonly used model assumptions on carbon use efficiency and allocation. To our knowledge, this is the first study to constrain model predictions of individual tree-level growth sensitivity to C a and climate against tropical tree-ring data. Our results suggest that improving model processes related to WBPE is crucial to obtain better predictions of tropical forest responses to droughts and increasing C a . Finally, more accurate parameterization of WBPE will likely reduce the stimulation of woody growth by C a rise predicted by biosphere models.

54 ENVIRONMENTAL SCIENCES↗

Implementation and evaluation of the unified stomatal optimization approach in the Functionally Assembled Terrestrial Ecosystem Simulator (FATES)

Abstract. Stomata play a central role in regulating the exchange of carbon dioxide and water vapor between ecosystems and the atmosphere. Their function is represented in land surface models (LSMs) by conductance models. The Functionally Assembled Terrestrial Ecosystem Simulator (FATES) is a dynamic vegetation demography model that can simulate both detailed plant demographic and physiological dynamics. To evaluate the effect of stomatal conductance model formulation on forest water and carbon fluxes in FATES, we implemented an optimality-based stomatal conductance model – the Medlyn (MED) model – that simulates the relationship between photosynthesis (A) and stomatal conductance to water vapor (gsw) as an alternative to the FATES default Ball–Woodrow–Berry (BWB) model. To evaluate how the behavior of FATES is affected by stomatal model choice, we conducted a model sensitivity analysis to explore the response of gsw to climate forcing, including atmospheric CO2 concentration, air temperature, radiation, and vapor pressure deficit in the air (VPDa). We found that modeled gsw values varied greatly between the BWB and MED formulations due to the different default stomatal slope parameters (g1). After harmonizing g1 and holding the stomatal intercept parameter (g0) constant for both model formulations, we found that the divergence in modeled gsw was limited to conditions when the VPDa exceeded 1.5 kPa. We then evaluated model simulation results against measurements from a wet evergreen forest in Panama. Results showed that both the MED and BWB model formulations were able to capture the magnitude and diurnal changes of measured gsw and A but underestimated both by about 30 % when the soil was predicted to be very dry. Comparison of modeled soil water content from FATES to a reanalysis product showed that FATES captured soil drying well, but translation of drying soil to modeled physiology reduced the models' ability to match observations. Our study suggests that the parameterization of stomatal conductance models and current model response to drought are the critical areas for improving model simulation of CO2 and water fluxes in tropical forests.

54 ENVIRONMENTAL SCIENCES↗

Biological nitrogen fixation across major biomes in Latin America: Patterns and global change effects

We report biological nitrogen fixation (BNF) supports terrestrial primary productivity and plays key roles in mediating human-induced changes in global nitrogen (N) and carbon cycling. However, there are still critical uncertainties in our understanding of the amount of BNF occurring across terrestrial ecosystems, and of how terrestrial BNF will respond to global change. We synthesized BNF data from Latin America, a region reported to sustain some of the highest BNF rates on Earth, but that is underrepresented in previous data syntheses. We used meta-analysis and modeling approaches to estimate BNF rates across Latin America's major biomes and to evaluate the potential effects of increased N deposition and land-use change on these rates. Unmanaged tropical and subtropical moist forests sustained observed and predicted total BNF rates of 10 ± 1 and 14 ± 1 kg N ha -1 y -1 , respectively, supporting the hypothesis that these forests sustain lower BNF rates than previously thought. Free-living BNF accounted for two-thirds of the total BNF in these forests. Despite an average 30% reduction of free-living BNF in response to experimental N-addition, our results suggest free-living BNF rate responses to current and projected N deposition across tropical and subtropical moist forests are small. In contrast, the conversion of unmanaged ecosystems to crop and pasture lands increased BNF rates across all terrestrial biomes, mostly in savannas, grasslands, and dry forests, increasing BNF rates 2-fold. The information obtained here provides a more comprehensive understanding of BNF patterns for Latin America.

54 ENVIRONMENTAL SCIENCES↗

The Impact of Anthropogenic Land Use and Land Cover Change on Regional Climate Extremes

Recent research highlights the role of land surface processes in heat waves, droughts, and other extreme events. Here we use an earth system model (ESM) from the Geophysical Fluid Dynamics Laboratory (GFDL) to investigate the regional impacts of historical anthropogenic land useland cover change (LULCC) on combined extremes of temperature and humidity. A bivariate assessment allows us to consider aridity and moist enthalpy extremes, quantities central to human experience of near-surface climate conditions. We show that according to this model, conversion of forests to cropland has contributed to much of the upper central US and central Europe experiencing extreme hot, dry summers every 2-3 years instead of every 10 years. In the tropics, historical patterns of wood harvesting, shifting cultivation and regrowth of secondary vegetation have enhanced near surface moist enthalpy, leading to extensive increases in the occurrence of humid conditions throughout the tropics year round. These critical land use processes and practices are not included in many current generation land models, yet these results identify them as critical factors in the energy and water cycles of the midlatitudes and tropics.

Near-surface↗

Trends and Seasonal Variability of Atmospheric NO2 and HNO3 Concentrations Across Three Major African Biomes Inferred from Long-Term Series of Ground-Based and Satellite Measurements

In the framework of the INDAAF (International Network to study Deposition and Atmospheric chemistry in AFrica) programme, part of the ACTRIS (Aerosols, Clouds, and Trace gases Research InfraStructure), European Research Infrastructure for the long-term observation of Aerosol, Cloud, and Trace gases, this paper aims to study trends and seasonal variability of surface atmospheric NO2 and HNO3 concentrations, and OMI (Ozone Monitoring Instrument) NO2 over 6 sites in tropical Africa. Sites are located in west and central Africa to represent the major African biomes: dry savanna (Banizoumbou, Niger and Katibougou, Mali), wet savanna (Djougou, Benin and Lamto, Côte d’Ivoire) and forest (Bomassa, Republic of Congo and Zoétélé, Cameroon). Ground-based NO2 and HNO3 concentrations were obtained over the period 1998–2015 using INDAAF passive samplers at a monthly basis, and NO2 Vertical Column Densities (VCDs) from OMI for a 1-degree grid cell around each sites were obtained from 2005 to 2015. Mean annual NO2 concentrations ranged from 2.3 plus or minus 1.2 to 0.9 plus or minus 0.4 parts per billion (ppb) from dry savannas to forests, representing a north-south gradient. In dry savannas, we observe two concentration peaks of NO2 appearing at the beginning and the end of the wet season both for ground-based and satellite measurements, whereas at wet savannas and forest sites, NO2 concentrations are highest in the dry season. The seasonality of surface NO2 observations provide further evidence for a large role of microbial soil NOx emissions in dry savannas and of biomass burning NOx emissions in wet savanna and forest sites. Mean annual HNO3 concentrations ranged from 0.4 to 0.5 ppb in dry and wet savannas to 0.2 to 0.3 ppb in forest. In dry ecosystems, higher HNO3 concentrations are measured in the early wet season, consistent with NO2 results. The analysis of a long-term dataset of surface O3 concentrations indicates that HNO3 production can mainly be explained by the photo-oxidation of NOx. Mann-Kendall and Seasonal Kendall statistical tests showed that NO2 surface concentrations have a significant decreasing seasonal and annual trends at multiple sites (p-value less than 0.05) ranging from -2.96 percent per year (at Zoétélé) to -0.64 percent per year (at Banizoumbou). HNO3 results indicate no trends except at Bomassa (1.07 percent per year). The decreasing NO2 ground-based concentration trends observed in wet savannas sites are correlated with OMI NO2 decreasing trends at these sites. Trends obtained for NO2 concentrations in wet savanna and forest ecosystems are consistent with trends of NOₓ biomass burning emissions.

Trends↗

Analysis of forest and forest clearings in Amazonia with Landsat and Shuttle Imaging Radar-A data

Landsat and Shuttle Imaging Radar-A L band (23.5 cm wavelength) data from 1981 were used to analyze areas of intact tropical forest and areas recently cleared from forest for agriculture and pasture in Mato Grosso, Brazil. Portions of SIR-A Data Takes #24C and #31 film were digitized using a microdensitometer. Landsat MSS data of July 1981 were also examined. The digital values from SIR-A DT 31 were compared with the normalized difference vegetation index values (NDVI) from the Landsat data for the same sites. Contrary to expectations some cleared areas had brighter radar responses than surrounding forest. The explanation seems to be that a recently cleared forest (cut and burned during the dry season) is texturally very rough as the exposed standing and fallen boles and woody litter may function as effective corner or dihedral reflectors. Combining radar data with NDVI data may help to assess the relative age of forest clearings and determine differences in both woody and green leaf biomass of primary and secondary tropical forests.

Stone, Thomas A.↗

Biomass-Burning Smoke Heights over the Amazon Observed from Space

We characterise the vertical distribution of biomass-burning emissions across the Amazon during the biomass-burning season (July–November) with an extensive climatology of smoke plumes derived from MISR and MODIS (2005–2012) and CALIOP (2006–2012) observations. Smoke plume heights exhibit substantial variability, spanning a few hundred metres up to 6 km above the terrain. However, the majority of the smoke is located at altitudes below 2.5 km. About 60 % of smoke plumes are observed in drought years, 40 %–50 % at the peak month of the burning season (September) and 94 % over tropical forest and savanna regions, with respect to the total number of smoke plume observations. At the time of the MISR observations (10:00–11:00 LT), the highest plumes are detected over grassland fires (with an averaged maximum plume height of ∼1100 m) and the lowest plumes occur over tropical forest fires (∼800 m). A similar pattern is found later in the day (14:00–15:00 LT) with CALIOP, although at higher altitudes (2300 m grassland vs. 2000 m tropical forest), as CALIOP typically detects smoke at higher altitudes due to its later overpass time, associated with a deeper planetary boundary layer, possibly more energetic fires, and greater sensitivity to thin aerosol layers. On average, 3 %–20 % of the fires inject smoke into the free troposphere; this percentage tends to increase toward the end of the burning season (November: 15 %–40 %). We find a well-defined seasonal cycle between MISR plume heights, MODIS fire radiative power and atmospheric stability across the main biomes of the Amazon, with higher smoke plumes, more intense fires and reduced atmospheric stability conditions toward the end of the burning season. Lower smoke plume heights are detected during drought (800 m) compared to non-drought (1100 m) conditions, in particular over tropical forest and savanna fires. Drought conditions favour understory fires over tropical forest, which tend to produce smouldering combustion and low smoke injection heights. Droughts also seem to favour deeper boundary layers and the percentage of smoke plumes that reach the free troposphere is lower during these dry conditions. Consistent with previous studies, the MISR mid-visible aerosol optical depth demonstrates that smoke makes a significant contribution to the total aerosol loading over the Amazon, which in combination with lower injection heights in drought periods has important implications for air quality. This work highlights the importance of biome type, fire properties and atmospheric and drought conditions for plume dynamics and smoke loading. In addition, our study demonstrates the value of combining observations of MISR and CALIOP constraints on the vertical distribution of smoke from biomass burning over the Amazon.

Gonzalez-Alonso, Laura↗

Fine-root dynamics vary with soil depth and precipitation in a lown-utrient tropical forest in the Central Amazonia

A common assumption in tropical ecology is that root systems respond rapidly to climatic cues but that most of that response is limited to the uppermost layer of the soil, with relatively limited changes in deeper layers. However, this assumption has not been tested directly, preventing models from accurately predicting the response of tropical forests to environmental change. We measured seasonal dynamics of fine roots in a Central Amazonia mature forest using minirhizotrons to 90 cm depth, which were calibrated with fine roots extracted from soil cores. Root productivity and mortality in superficial soil layers were positively correlated with precipitation, whereas root standing length was greater during the dry periods at the deeper layers. Contrary to historical assumptions, a large fraction of fine-root standing biomass (46%) and productivity (41%) were found in soil layers deeper than 30 cm. Furthermore, root turnover decreased linearly with soil depth. Our findings demonstrate a strong relationship between fine-root dynamics and precipitation regimes in Central Amazonia. Our results also emphasize the importance of deep roots for accurate estimates of primary productivity and the interaction between roots and carbon, water, and nutrients.

54 ENVIRONMENTAL SCIENCES↗

The Forest, The Fly, and the Virus?

All known outbreaks of Ebola have been linked to tropical forests. We undertook a study of environmental conditions associated with Ebola hemorrhagic fever after preliminary reports strongly suggested that simultaneous outbreaks occurred, during two limited time periods in the 1970s and 1990s, immediately following sudden transitions between dry and wet seasons.

Tucker, Compton J.↗

Tropospheric Ozone and Biomass Burning

This paper studies the significance of pyrogenic (e.g., biomass burning) emissions in the production of tropospheric ozone in the tropics associated with the forest and savanna fires in the African, South American, and Indonesian regions. Using aerosol index (Al) and tropospheric column ozone (TCO) time series from 1979 to 2000 derived from the Nimbus-7 and Earth Probe TOMS measurements, our study shows significant differences in the seasonal and spatial characteristics of pyrogenic emissions north and south of the equator in the African region and Brazil in South America. In general, they are not related to the seasonal and spatial characteristics of tropospheric ozone in these regions. In the Indonesian region, the most significant increase in TCO occurred during September and October 1997, following large-scale forest and savanna fires associated with the El Nino-induced dry season. However, the increase in TCO extended over most of the western Pacific well outside the burning region and was accompanied by a decrease in the eastern Pacific resembling a west-to-east dipole about the date-line. The net increase in TCO integrated over the tropical region between 15 deg N and 15 deg S was about 6-8 Tg (1 Tg = 10(exp 12) gm) over the mean climatological value of about 72 Tg. This increase is well within the range of interannual variability of TCO in the tropical region and does not necessarily suggest a photochemical source related to biomass burning. The interannual variability in TCO appears to be out of phase with the interannual variability of stratospheric column ozone (SCO). These variabilities seem to be manifestations of solar cycle and quasibiennial oscillations.

Chandra, Sushil↗

The genome of Shorea leprosula (Dipterocarpaceae) highlights the ecological relevance of drought in aseasonal tropical rainforests

Hyperdiverse tropical rainforests, such as the aseasonal forests in Southeast Asia, are supported by high annual rainfall. Its canopy is dominated by the species-rich tree family of Dipterocarpaceae (Asian dipterocarps), which has both ecological (e.g., supports flora and fauna) and economical (e.g., timber production) importance. Recent ecological studies suggested that rare irregular drought events may be an environmental stress and signal for the tropical trees. We assembled the genome of a widespread but near threatened dipterocarp, Shorea leprosula, and analyzed the transcriptome sequences of ten dipterocarp species representing seven genera. Comparative genomic and molecular dating analyses suggested a whole-genome duplication close to the Cretaceous-Paleogene extinction event followed by the diversification of major dipterocarp lineages (i.e. Dipterocarpoideae). Interestingly, the retained duplicated genes were enriched for genes upregulated by no-irrigation treatment. These findings provide molecular support for the relevance of drought for tropical trees despite the lack of an annual dry season.

59 BASIC BIOLOGICAL SCIENCES↗