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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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Dynamics of coupled thermoacoustic modes: Noise and frequency spacing effects

Practical combustion systems consist of multiple thermoacoustic modes that are linearly stable or unstable at a wide range of frequencies. When coupled, the modal interactions are a strong function of the frequency spacing between them – having very significant implications on interpretation of linear stability or instability of modes from experimental data. Frequency spacing between the modes particularly influences the stability and existence of potential limit cycle solutions. In this paper, we extend earlier deterministic studies to include the effects of noise, studying how deterministic dynamics change with the addition of noise and the simultaneous impact of frequency spacing (i.e., closely, or widely spaced). Specifically, this paper characterizes three key effects of noise, which are (1) distribution of limit cycle amplitudes (“diffusion”), (2) shift in the average limit cycle amplitudes (“noise induced drift”), and (3) introduction of new bifurcations that are not present in the deterministic system. Key conclusions from this work are that in highly noisy practical environments, a deterministic/ low noise analysis will not be sufficient to explain even critical qualitative features of the system – such as existence of stable limit cycles or their amplitudes. Furthermore, the nature of noise-induced effects on nonlinear modal interactions can be fundamentally different for degenerate, closely spaced, and widely spaced modes.

42 ENGINEERING↗

Interpreting and Stabilizing Machine-Learning Parametrizations of Convection

Neural networks are a promising technique for parameterizing subgrid-scale physics (e.g., moist atmospheric convection) in coarse-resolution climate models, but their lack of interpretability and reliability prevents widespread adoption. For instance, it is not fully understood why neural network parameterizations often cause dramatic instability when coupled to atmospheric fluid dynamics. This paper introduces tools for interpreting their behavior that are customized to the parameterization task. First, we assess the nonlinear sensitivity of a neural network to lower-tropospheric stability and the midtropospheric moisture, two widely studied controls of moist convection. Second, we couple the linearized response functions of these neural networks to simplified gravity wave dynamics, and analytically diagnose the corresponding phase speeds, growth rates, wavelengths, and spatial structures. To demonstrate their versatility, these techniques are tested on two sets of neural networks, one trained with a super-parameterized version of the Community Atmosphere Model (SPCAM) and the second with a near-global cloud-resolving model (GCRM). Additionally, even though the SPCAM simulation has a warmer climate than the cloud-resolving model, both neural networks predict stronger heating/drying in moist and unstable environments, which is consistent with observations. Moreover, the spectral analysis can predict that instability occurs when GCMs are coupled to networks that support gravity waves that are unstable and have phase speeds larger than 5 m s -1 . In contrast, standing unstable modes do not cause catastrophic instability. Using these tools, differences between the SPCAM-trained versus GCRM-trained neural networks are analyzed, and strategies to incrementally improve both of their coupled online performance unveiled.

54 ENVIRONMENTAL SCIENCES↗

Fractal Model for Drag Reduction on Multiscale Nonwetting Rough Surfaces

Rough surfaces in contact with a flow of fluid exhibit alternating no-slip and free shear boundary conditions at the solid–liquid and air–liquid interfaces, respectively, thereby potentially offering drag reduction benefits. The balance between the dynamic pressure in the flow and the restoring capillary pressure in the interasperity spaces determines the stability of the Cassie state of wettability and is a function of the relative extent of no-slip and free shear regions per unit surface area. In the present study, using a fractal representation of rough surface topography, an analytical model is developed to quantify the stability of the Cassie state of wettability as well as drag reduction and the friction factor for laminar flow in a rectangular channel between nonwetting multiscale rough surfaces. A systematic study is conducted to quantify the effects of fractal parameters of the surfaces and the flow Reynolds number on drag reduction and the friction factor. The studies are used to develop friction factor curves extending the classical Moody diagram to hydrophobic and superhydrophobic surfaces. On the basis of the studies, regime maps are derived for estimating the extent of drag reduction offered by hydrophobic and superhydrophobic surfaces, revealing that superhydrophobic surfaces do not always offer the best drag reduction performance. The application of the fractal model to practical topographies of nonwetting surfaces of copper, aluminum, and zinc oxide fabricated via electrodeposition and etching is also discussed.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Dynamic Phasor Modeling of Three Phase Voltage Source Inverters

With the increase in the development and implementation of distributed energy resources, application of parallel connected inverters is increasing and as a result having accurate modeling and simulation tools that can help in the design, analysis and stability assessment of the grid is of great importance. Development of fundamental methods that can achieve accurate, reliable, and computationally efficient results can be very beneficial. Application of Dynamic phasor (DP) modeling method has been limited to study of limited harmonics and small combination of interconnected converters due to the complexity associated with developing models that describe larger systems. In this paper, application of DP modeling method is expanded to model any number of parallel connected three phase voltage source inverter (VSI) with inclusion of a wider harmonic content including fundamental, subharmonics, inter-harmonics, switching frequency and their sidebands. Results achieved from this modeling method is compared with conventional average model as well as detailed switching model and the effect of inclusion of wider harmonic content on accuracy of DP modeling method is demonstrated.

Xue, Yaosuo↗

Selective mass scaling for single-layer thick shell elements in DYNA3D

Hexahedral elements can be adapted to model thin and moderately thick structures by neglecting the coupling of through-thickness stress, resulting in a fully three-dimensional, but simplified, state of stress. These specialized elements, often referred to as “thick” or “solid” shells, are generally employed to model thin-walled structures using continuum mechanics-based material models. In explicit dynamics simulations, where computational speed is important, these elements are integrated with a single quadrature point and a set of anti-hourglassing (stabilizing) forces. Thick shells, by definition, have a thickness dimension smaller than their in-plane dimensions, and this small thickness often determines the stable time step size in simulations, despite the mechanics being approximated. To alleviate this limitation while retaining the relevant dynamics of thin-walled structures, selective mass scaling (SMS), or selective mass “augmentation,” has been proposed in the literature. In this technical report, we explore the application of SMS to single-layer thick shells in the simulation software DYNA3D.

42 ENGINEERING↗

An evolutionarily conserved tryptophan cage promotes folding of the extended RNA recognition motif in the hnRNPR ‐like protein family

Abstract The heterogeneous nuclear ribonucleoprotein (hnRNP) R‐like family is a class of RNA binding proteins in the hnRNP superfamily with diverse functions in RNA processing. Here, we present the 1.90 Å X‐ray crystal structure and solution NMR studies of the first RNA recognition motif (RRM) of human hnRNPR. We find that this domain adopts an extended RRM (eRRM1) featuring a canonical RRM with a structured N‐terminal extension (N ext ) motif that docks against the RRM and extends the β‐sheet surface. The adjoining loop is structured and forms a tryptophan cage motif to position the N ext motif for docking to the RRM. Combining mutagenesis, solution NMR spectroscopy, and thermal denaturation studies, we evaluate the importance of residues in the N ext –RRM interface and adjoining loop on eRRM folding and conformational dynamics. We find that these sites are essential for protein solubility, conformational ordering, and thermal stability. Consistent with their importance, mutations in the N ext –RRM interface and loop are associated with several cancers in a survey of somatic mutations in cancer studies. Sequence and structure comparison of the human hnRNPR eRRM1 to experimentally verified and predicted hnRNPR‐like proteins reveals conserved features in the eRRM.

Biochemistry & Molecular Biology↗

Sulfur-doped graphene anchoring of ultrafine Au 25 nanoclusters for electrocatalysis

The biggest challenge of exploring the catalytic properties of under-coordinated nanoclusters is the issue of stability. We demonstrate herein that chemical dopants on sulfur-doped graphene (S-G) can be utilized to stabilize ultrafine (sub-2 nm) Au 25 (PET)18 clusters to enable stable nitrogen reduction reaction (NRR) without significant structural degradation. The Au 25 @S-G exhibits an ammonia yield rate of 27.5μgNH 3 ∙ mg Au -1 ∙ h -1 at -0.5 V with faradic efficiency of 2.3%. More importantly, the anchored clusters preserve ~ 80% NRR activity after four days of continuous operation, a significant improvement over the 15% remaining ammonia production rate for clusters loaded on undoped graphene tested under the same conditions. Isotope labeling experiments confirmed the ammonia was a direct reaction product of N 2 feeding gas instead of other chemical contaminations. Ex-situ X-ray photoelectron spectroscopy and X-ray absorption near-edge spectroscopy of post-reaction catalysts reveal that the sulfur dopant plays a critical role in stabilizing the chemical state and coordination environment of Au atoms in clusters. Further ReaxFF molecular dynamics (RMD) simulation confirmed the strong interaction between Au nanoclusters (NCs) and S-G. Furthermore, this substrate-anchoring process could serve as an effective strategy to study ultrafine nanoclusters’ electrocatalytic behavior while minimizing the destruction of the under-coordinated surface motif under harsh electrochemical reaction conditions.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Exploring the role of electronic structure on photo-catalytic behavior of carbon-nitride polymorphs

A fully self-consistent density-functional theory (DFT) with improved functionals is used herein to provide a comprehensive account of structural, electronic, and optical properties of C 3 N 4 polymorphs. Using our recently developed van Leeuwen-Baerends (vLB) corrected local-density approximation (LDA), we implemented LDA + vLB within full-potential N th -order muffin-tin orbital (FP-NMTO) method and show that it improves structural properties and band gaps compared to semi-local functionals (LDA/GGA). We demonstrate that the LDA + vLB predicts band-structure and work-function for well-studied 2D-graphene and bulk-Si in very good agreement with experiments, and more exact hybrid functional (HSE) calculations as implemented in the Quantum-Espresso (QE) package. The structural and electronic-structure (band gap) properties of C 3 N 4 polymorphs calculated using FP-NMTO-LDA + vLB is compared with more sophisticated hybrid-functional calculations. We also perform detailed investigation of photocatalytic behavior using QE-HSE method of C 3 N 4 polymorphs through work-function, band (valence and conduction) position with respect to water reduction and oxidation potential. Our results show $γ$-C 3 N 4 as the best candidate for photocatalysis among all the C 3 N 4 polymorphs but it is dynamically unstable at ‘zero’ pressure. We show that $γ$-C 3 N 4 can be stabilized under hydrostatic-pressure, which improves its photocatalytic behavior relative to water reduction and oxidation potentials.

36 MATERIALS SCIENCE↗

Diethylenetriamine-functionalized graphene oxide: Insights into ion adsorption and applications in rare earth element separation

The growing demand for critical minerals and materials requires atom- and energy-efficient, selective separations to overcome the challenges posed by the similar chemical and physical properties of the rare earth elements (REEs) and their low concentrations in unconventional domestic feedstocks. Here, in this study, we developed diethylenetriamine-functionalized graphene oxide (DETA-GO) as a membrane material for REE adsorption and separation. Synthesis conditions were optimized to maximize nitrogen incorporation while also preserving GO dispersibility for facile membrane fabrication. We investigated the mechanism of amine functionalization, the nitrogen-bonding configurations, the organization of the interlayer transport channels, and the resulting effects on ion and water transport for REE separations. Neat-GO and DETA-GO multilayer laminate membranes were fabricated by vacuum filtration onto polymer supports. To investigate the effects of amine functionalization, the membranes were characterized using scanning electron microscopy, Raman, Fourier transform infrared, and X-ray photoelectron spectroscopy, as well as grazing-incidence X-ray diffraction measurements. Ion permeation experiments with representative lanthanum (La 3+ ) and ytterbium (Yb 3+ ) solutions revealed enhanced ion adsorption and water transport through DETA-GO membranes compared to neat-GO. The strong affinity of the membranes for multivalent REEs was also validated with conductivity and inductively coupled plasma mass spectrometry measurements. Atomistic insight into the role of amine functionalization in modulating nanochannel architecture and long-term stability, optimizing adsorption sites, and regulating REE and water transport was obtained using classical molecular dynamics simulations. Collectively, our joint experimental and theoretical study demonstrates the potential of DETA-GO membranes for selective REE separations, offering insights into ion-binding mechanisms, water-transport properties, and nanochannel optimization for the recovery of critical materials from aqueous feedstocks.

Adsorbent↗

Unraveling the hysteretic behavior at double cations-double halides perovskite - electrode interfaces

Despite over a decade of research on metal halide perovskites (MHPs) in the context of photovoltaic applications, understanding the nature of electronic and ionic processes associated with current-voltage (I-V) hysteretic behavior has been limited. Here, we explore the hysteretic behavior in (FAPbI 3 ) 0.85 (MAPbBr 3 ) 0.15 perovskite devices with lateral Cr electrodes by applying first order reversal curve (FORC) bias waveform in I-V, Kelvin probe force microscopy (KPFM) measurements, and in-situ chemical imaging by time-resolved time-of-flight secondary ion mass spectrometry (tr-ToF-SIMS). In dark, we reveal pronounced hysteretic behaviors of charge dynamics in the off-field by probing time-dependent current and contact potential difference (CPD). Under illumination, transient and hysteretic behaviors are significantly reduced. The tr-ToF-SIMS results reveal that the hysteretic behaviors are strongly associated with accumulation of Br- ions at the interfaces. In addition, the low mobility MA + ions result in transient behavior and contribute to the hysteretic phenomena. It was shown that Pb 2+ ions can be reduced at the interfaces due to electrochemical reactions with the electrode in the presence of charge injection and photogenerated charges. Furthermore, these hysteretic behaviors associated with charge dynamics, ion migration, and interfacial electrochemical reaction are critical to further improve the performance and stability of MHPs photovoltaics and optoelectronics.

42 ENGINEERING↗

Unraveling the Effects of Cobalt on Crystal Growth and Solution Behavior of Nb 6 P 2 W 12 -based Dimeric Clusters

We report the synthesis, characterization, and solution self-assembly of plenary Nb 6 P 2 W 12 -based transition-metal substituted polyoxometalate, which is obtained by simply adding transition metals (Co 2+ ) into aqueous solution containing cluster [(NbO 2 ) 6 P 2 W 12 O 56 ] 12- , which is obtained by an in situ synthetic method. The incorporation of Co 2+ ions significantly affects the crystal structure, resulting in the formation of a 1D chain-like crystal and the first example of a niobotungstate-based cobalt derivative cluster. The behavior and stability of this cluster in solution are confirmed by time-resolved static light scattering, dynamic light scattering, small-angle X-ray scattering, and electrospray mass spectrometry studies.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Correction to “Frank–Kasper Phases of Diblock Copolymer Melts Studied with the DPD Model: SCF Results”

In a recent study, (1) we performed the self-consistent field (SCF) calculations of a dissipative particle dynamics (DPD) model of conformationally asymmetric diblock copolymer A-B melts to study the stability of various Frank–Kasper (FK) phases formed by such A-B melts. While all the equations in ref (1) are correct, we did not calculate the dimensionless (mean-field) Helmholtz free energies per chain βf c = βu c,χ + βu c,κ – s c /k B and the dimensionless stresses dβf c /dθ of ordered phases accurately. For example, the dimensionless (nonbonded) internal energy per chain due to the system compressibility βu c,κ = (N/2κ)∑ q βû 0 (|q|)(ϕ̂ A (q) + ϕ̂ B (q) – δ q,0 )(ϕ̂ A (−q) + ϕ̂ B (−q) – δ– q,0 ) should be calculated in the reciprocal space as given (note that βû 0 (|q|) is obtained analytically, and that since ϕ A (r) is real 𝜙̂ A (−𝐪)= $\overline{𝜙̂ A}$(𝐪), i.e., the complex conjugate of ϕ̂ A (q)); this corresponds to numerically evaluating βu c,κ = (N/2κ)∫dr(ϕ A (r) + ϕ B (r) – 1)ψ(r) with ψ(r) ≡ (∫dr′βu 0 (|r–r′|)(ϕ A (r′) + ϕ B (r′) – 1)/V in the real space via the (composite) trapezoidal rule. While the trapezoidal rule is less accurate than the Romberg integration (2) in general, the opposite occurs when the integration domain is periodic; this was pointed out by Matsen in ref (3) and explained in detail in refs (4and5). With our ignorance of this exceptional convergence property of the trapezoidal rule for periodic functions, we calculated all convolutions having the form of ψ(r) in the reciprocal space via the fast Fourier transforms (6) but those having the form of βu c,κ in the real space via Romberg integration; the latter leads to inaccurate results and unfortunately incorrect phase diagrams reported in ref (1), which are corrected here.

He, Juntong↗

Activation of Lattice and Adatom Oxygen by Highly Stable Ceria-Supported Cu Single Atoms

Requiring catalysts to be both active yet stable over long periods of time under variable reaction conditions including high and low temperatures is a daunting challenge due to the almost mutual exclusivity of these constraints. Using CO oxidation as a probe reaction, in this work we demonstrate that thermally stable single atom copper catalysts prepared by high temperature synthesis (atom trapping) on ceria can achieve this feat by allowing modulation of the Cu charge state through facile charge transfer between active site and support. This provides the catalysts with an ability to activate either lattice or adatom oxygen atoms, accessing additional reaction channels depending on the reaction conditions. Such adaptability allows dynamic response of catalysts enabling them to remain active under variable reaction conditions. The inherent stability of the catalyst arises from the enhanced strength of the Cu-O interactions from high temperature synthesis that exist even when Cu oxidation state varies, which retards sintering and deactivation. As we show here, one can circumvent the dilemma of designing catalysts that are simultaneously active and stable by matching the redox properties of the active site and support and establishing an environmental adaptability around the active sites.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Active learning of polarizable nanoparticle phase diagrams for the guided design of triggerable self-assembling superlattices

Polarizable nanoparticles are of interest in materials science because of their rich and complex phase behavior that can be used to engineer nanostructured materials with long-range crystalline order. To understand and rationally navigate the design space of polarizable nanoparticles for self-assembling highly ordered superlattices, we developed a coarse-grained computational model to describe the nanoparticle-nanoparticle interactions in implicit solvent and employ the computationally efficient image method to model many-body polarization interactions. We conducted high-throughput virtual screening over a five-dimensional particle design space spanned by temperature, particle size, particle charge, particle dielectric, and solvent dielectric using enhanced sampling molecular dynamics calculations within an active learning framework to efficiently map out the regions of thermodynamic stability of the self-assembled aggregates. We validate our predictions in comparisons against small angle x-ray scattering measurements of gold nanoparticles surface functionalized with metal chalcogenide ligands. Lastly, we use our validated phase maps to computationally design switchable nanostructured materials capable of triggered assembly and disassembly as a function of temperature and solvent dielectric with potential applications as sensors, smart windows, optoelectronic devices, and in medical diagnostics.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A quantitative model for a nanoscale switch accurately predicts thermal actuation behavior

Manipulation of temperature can be used to actuate DNA origami nano-hinges containing gold nanoparticles. We develop a physical model of this system that uses partition function analysis of the interaction between the nano-hinge and nanoparticle to predict the probability that the nano-hinge is open at a given temperature. The model agrees well with experimental data and predicts experimental conditions that allow the actuation temperature of the nano-hinge to be tuned over a range of temperatures from 30 °C to 45 °C. Additionally, the model identifies microscopic interactions that are important to the macroscopic behavior of the system, revealing surprising features of the system. This combination of physical insight and predictive potential is likely to inform future designs that integrate nanoparticles into dynamic DNA origami structures or use strand binding interactions to control dynamic DNA origami behavior. Furthermore, our modeling approach could be expanded to consider the incorporation, stability, and actuation of other types of functional elements or actuation mechanisms integrated into nucleic acid devices.

36 MATERIALS SCIENCE↗

Direct prediction of nonlinear tearing mode saturation using a variational principle

It is shown that the variational principle of multi-region relaxed magnetohydrodynamics (MRxMHD) can be used to predict the stability and nonlinear saturation of tearing modes in strong guide field configurations without resolving the dynamics and without explicit dependence on the plasma resistivity. While the magnetic helicity is not a good invariant for tearing modes, we show that the saturated tearing mode can be obtained as an MRxMHD state of a priori unknown helicity by appropriately constraining the current profile. The predicted saturated island width in a tearing-unstable force-free slab equilibrium is shown to reproduce the theoretical scaling at small values of Δ' and the scaling obtained from resistive magnetohydrodynamics simulations at large Δ'.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Structural basis of transcription: RNA polymerase II substrate binding and metal coordination using a free-electron laser

Catalysis and translocation of multisubunit DNA-directed RNA polymerases underlie all cellular mRNA synthesis. RNA polymerase II (Pol II) synthesizes eukaryotic pre-mRNAs from a DNA template strand buried in its active site. Structural details of catalysis at near-atomic resolution and precise arrangement of key active site components have been elusive. Here, we present the free-electron laser (FEL) structures of a matched ATP-bound Pol II and the hyperactive Rpb1 T834P bridge helix (BH) mutant at the highest resolution to date. The radiation-damage-free FEL structures reveal the full active site interaction network, including the trigger loop (TL) in the closed conformation, bonafide occupancy of both site A and B Mg 2+ , and, more importantly, a putative third (site C) Mg 2+ analogous to that described for some DNA polymerases but not observed previously for cellular RNA polymerases. Molecular dynamics (MD) simulations of the structures indicate that the third Mg 2+ is coordinated and stabilized at its observed position. TL residues provide half of the substrate binding pocket while multiple TL/BH interactions induce conformational changes that could allow translocation upon substrate hydrolysis. Consistent with TL/BH communication, a FEL structure and MD simulations of the T834P mutant reveal rearrangement of some active site interactions supporting potential plasticity in active site function and long-distance effects on both the width of the central channel and TL conformation, likely underlying its increased elongation rate at the expense of fidelity.

Science & Technology - Other Topics↗