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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 901 records · Page 50
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

pnnl/metagenomic_analysis

Metagenomic analysis is a computationally intensive task, this problem is compounded when many hundreds of samples need to be analyzed. We needed a program that would process the metagenomic sequencing data, manage computing resources, and combine the results into a unified output. We developed a script that prepares raw metagenomic sequencing data for analysis, configures analysis parameters, launches analysis jobs, keeps track of analysis progress, and combines analysis output. The analysis itself itself is done by the functionality provided by mothur (https://www.mothur.org/).

Avila, Andrew↗
DOE OSTI2019

pnnl/apt

The current scripts utilize a well-known cluster analysis algorithm, called ordering points to identify the clustering structures (OPTICS), and an automatic cluster extraction algorithm for clustering analysis of 3D spatial data, specifically for the Atom Probe Tomography data. A hierarchical clustering scheme, together with density-based clustering, were implemented.

Wang, Jing↗
DOE OSTI2023

SF_Microbe_Methane (SFMM) v1

Scripts for analyzing microbial community taxonomy and function, running statistical tests, and making complex graphics.

de Mesquita, CliftonB↗
DOE OSTI2024

rox2vtk v0.1

For the development of magnets for particle accellerators, the tool ROXIE from CERN has become a de facto standard. This script interprets the output files of ROXIE and translates them into a VTK file that can be read in ParaView for visualization.

Messe, Christian↗
DOE OSTI2022

Podman-hpc v1.0

We have developed some scripts and tools that compliment an existing open-source product (Podman, https://podman.io/). This enables podman to function as a high-performance container solution. This capability is similar to Shifter and Singularity (both developed at LBNL). The advantage of leveraging Podman is it has greater support in the broader community outside of HPC and has capabilities missing from many of the HPC-only solutions. The specific enhancements we wish to share our how to enable Podman to scale to very large HPC jobs and our integrations we have done to utilize high-performance interconnects and GPUs.

Cannon, Richard↗
DOE OSTI2024

FlowBench Raw Data Archive

The repo that provides data archive for DOE PoSeiDon project. It also contains scripts and instructions to parse the data.

George, Papadimitriou↗
DOE OSTI2024

J1939 Decoder

The J1939 Decoder package is a set of scripts that will allow one to decode J1939 messages.

Olatt, Joseph↗
DOE OSTI2022

Codes for sub-resolution modeling of the apparent mass loss in quantitative broadband X-ray radiography

SAND2022-3463 O This code is intended to accompany the journal manuscript, “Sub-resolution modeling of the apparent mass loss in quantitative broadband X-ray radiography." The manuscript covers in detail how to improve the quantitative mass distribution measurements made for optical diagnostics of multiphase flows. The code contains four separate script files in MATLAB format to support the objective of improving mass measurements. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Rahman, Naveed↗
DOE OSTI2020

MalGen

MalGen is helper code that includes a script for loading data in format for PyTorch neural network models. It also includes example models. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525. SAND2021-3078 O

Johnson, NicholasT↗
DOE OSTI2023

NeuralRW-Loihi: Spiking Discrete Time Markov Chain Simulator for Intel Loihi v

SAND2024-01302O NeuralRW-Loihi: Spiking Discrete Time Markov Chain Simulator for Intel Loihi is a neuromorphic script that generates a random walk simulation of a discrete-time Markov Chain for the Loihi neuromorphic hardware. The code was used to produce the paper "Neuromorphic scaling advantages for energy-efficient random walk computations" by Smith et al., 2021. It was published in Nature Electronics. The software provides code for implementing the discrete time Markov chain random walks on Intel's Loihi Neuromorphic platform. In addition, it provides an example problem through a mini app.

Aimone, James↗
DOE OSTI2022

clif

SAND2022-12903 O clif contains code to perform climate fingerprinting. It includes capabilities for principal component analysis of climate data, Fourier analysis, a collection of pre-processing scripts, and time series statistical tools. It uses a templated object-oriented programming approach to integrate all classes with the operator in Scikit Learn. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Nichol, Jeffrey↗
DOE OSTI2024

PhyML

Python scripts for physics informed machine learning for time-dependent problems. The code implements hard constrained sequential physics-informed neural networks (HCSPINNs) using JAX library. The details of the method and implementation can be found in the following paper: Roy, P., & Castonguay, S. (2024). Exact Enforcement of Temporal Continuity in Sequential Physics- Informed Neural Networks. arXiv preprint arXiv:2403.03223. (https://arxiv.org/abs/2403.03223)

Roy, Pratanu↗
DOE OSTI2024

Deeplynx Dag Repository

The DeepLynx DAG repository will contain several Airflow DAGs (Directed Acyclic Graphs) which will be used in the context of DeepLynx's deployed Apache Airflow instance. These DAGs will be used for multiple data management tasks for DeepLynx data, including but not limited to: - bringing data from various sources and tools into DeepLynx - managing sequential data workflows, such as running Python scripts on data to perform analysis and returning the results to DeepLynx - performing any necessary transformation or pre-processing on data coming into DeepLynx from external sources or out of DeepLynx to go to external applications

Brownlee, JarenM.↗
DOE OSTI2025

PickerXL

Python scripts for using the PickerXL model, which operates on seismic single station data to pick primary and secondary waves.

Chai, Chengping [Oak Ridge National Laboratory (OR↗
DOE OSTI2025

Exascale Julia Grid Optimization

Simple Julia scrips for solving AC power flow, AC optimal power flow, and security-constrained AC optimal power flow. These scripts are intended for experimentation with different (possibly, new) methods, formulations, and settings for solving these power system problem. Their implementation, therefore, intentionally avoids excessive encapsulation, which makes other packages difficult to modify by non-developers.

Petra, Cosmin [Lawrence Livermore National Laborat↗
DOE OSTI2025

Hydroboost

HydroBoost is the most realistic revenue optimization tool for the hybridization of hydropower and battery energy storage systems to date. The innovative representation of how operators actually schedule hydropower in practice results in more realistic predictions of revenue and operations. Unlike other optimization tools, HydroBoost generates forecast energy prices with uncertainty to use in the optimization. This allows HydroBoost to give users a range of potential revenue with an upper bound using the perfect foresight pricing and a lower bound using a naive persistence forecast model. Additional forecast can be generated and used in the optimization, such as additive models, random forest, and neural networks to give further insight into potential revenue. HydroBoost has been designed to be applicable for both run-of-river and reservoir storage sites. The primary focus is on the day-ahead market and requires year-long data with an hour time-step. All time-series input and constraints are contained in an Excel worksheet for convince. The user will run the forecasting generation first with a Python script to give the optimization model the necessary requirements. Next the optimization is ran using Julia and results are generated and stored into a directory as csv files. HydroBoost includes an additional module to generate figures based on the results of the optimization simulation. The results help analyze the results and users to draw insights into how the hydro and battery systems are operated and the revenue each is producing. Additionally, the difference between the perfect foresight model and models that include forecast can easily be inspected.

Phillips, TylerB. [Idaho National Laboratory (INL)↗
DOE OSTI2024

Anchoring

This software provides methods and functions for training deep image classification models based on the principle of anchoring. It features a user-friendly PyTorch wrapper that facilitates the easy conversion of any model into an anchored model. The software supports various standard datasets and includes scripts for conducting evaluations. Developed with PyTorch, it is compatible with common neural network architectures used for image data. Additionally, it offers tools for computing evaluation metrics to assess model performance.

Narayanaswamy, Vivek Sivaraman↗
DOE OSTI2025

LDES-Sizing-and-siting-model (Power grid test cases for long-duration energy storage (LDES) siting) [SWR-25-75]

This repository contains code and data for performing a siting analysis of long-duration energy storage (LDES) in the 5-bus and RTS systems using the Sienna suite developed by the National Renewable Energy Laboratory for production cost modeling (PCM). This analysis involves moving the LDES component to different buses in the system, running a simulation, and considering the production cost of the simulation. Different system configurations are also analyzed with these scripts (such as moving load or renewable dispatch generators to different buses) to observe the impacts the system configuration has on optimal siting. This repository contains three sub directories discussed below. Both the 5-bus and RTS systems have two different initial configurations for the renewable energy components in them, one that is predominantly PV-driven and one that is predominantly wind-driven. Sienna suite can be found here: https://github.com/NREL-Sienna

Cole, David [University of Wisconsin]↗