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At least 919 records · Page 51

Serological evidence of arenavirus circulation among fruit bats in Trinidad

Tacaribe virus (TCRV) was isolated in the 1950s from artibeus bats captured on the island of Trinidad. The initial characterization of TCRV suggested that artibeus bats were natural reservoir hosts. However, nearly 60 years later experimental infections of Jamaican fruit bats ( Artibeus jamaicensis ) resulted in fatal disease or clearance, suggesting artibeus bats may not be a reservoir host. To further evaluate the TCRV reservoir host status of artibeus bats, we captured bats of six species in Trinidad for evidence of infection. Bats of all four fruigivorous species captured had antibodies to TCRV nucleocapsid, whereas none of the insectivore or nectarivore species did. Many flat-faced fruit-eating bats ( A. planirostris ) and great fruit-eating bats ( A. literatus ) were seropositive by ELISA and western blot to TCRV nucleocapsid antigen, as were two of four Seba’s fruit bats ( Carollia perspicillata ) and two of three yellow-shouldered fruit bats ( Sturnira lilium ). Serum neutralization tests failed to detect neutralizing antibodies to TCRV from these bats. TCRV RNA was not detected in lung tissues or lung homogenates inoculated onto Vero cells. These data indicate that TCRV or a similar arenavirus continues to circulate among fruit bats of Trinidad but there was no evidence of persistent infection, suggesting artibeus bats are not reservoir hosts.

59 BASIC BIOLOGICAL SCIENCES↗

Platelet cloaking of circulating tumour cells in patients with metastatic prostate cancer: Results from ExPeCT, a randomised controlled trial

Background: Circulating tumour cells (CTCs) represent a morphologically distinct subset of cancer cells, which aid the metastatic spread. The ExPeCT trial aimed to examine the effectiveness of a structured exercise programme in modulating levels of CTCs and platelet cloaking in patients with metastatic prostate cancer. Methods: Participants (n = 61) were randomised into either standard care (control) or exercise arms. Whole blood was collected for all participants at baseline (T0), three months (T3) and six months (T6), and analysed for the presence of CTCs, CTC clusters and platelet cloaking. CTC data was correlated with clinico-pathological information. Results: Changes in CTC number were observed within group over time, however no significant difference in CTC number was observed between groups over time. Platelet cloaking was identified in 29.5% of participants. A positive correlation between CTC number and white cell count (WCC) was observed (p = 0.0001), in addition to a positive relationship between CTC clusters and PSA levels (p = 0.0393). Conclusion: The presence of platelet cloaking has been observed in this patient population for the first time, in addition to a significant correlation between CTC number and WCC. Trial registration: ClincalTrials.gov identifier NCT02453139 .

60 APPLIED LIFE SCIENCES↗

Utah FORGE: Neubrex Well 16B(78)-32 Circulation Test Fiber Optics Monitoring Data and Reports - July, 2023

This dataset features Distributed Acoustic Sensing (DAS) and fiber optics monitoring data acquired by Neubrex Energy Services during the Utah FORGE Well 16B(78)-32 circulation test in July 2023. DAS and fiber optic monitoring data include absolute strain, strain change, strain change rate, distributed temperature sensing (DTS), and frequency band extraction (FBE). Data processing was completed between September and October 2023. The dataset includes the fiber optic sensing data collected during these operations, along with a data collection report, descriptions of the data, and instructions for reading the data files.

15 GEOTHERMAL ENERGY↗

Equilibrium and kinetic studies of sorption of 2.4-dichlorophenol onto 2 mixtures: bamboo biochar plus calcium sulphate (BC) and hydroxyapatite plus bamboo biochar plus calcium sulphate (HBC), in a fluidized bed circulation column

Sorption studies were carried out to investigate removal of 2.4-dichlorophenol (2.4-DCP) from aqueous solution in a fluidized bed by two types of adsorbent mixtures: BC (Bamboo char plus Calcium sulphate), and HBC (Hydroxyapatite plus Bamboo char plus Calcium sulphate); both manufactured in ball shape. The main material bamboo char was characterized by FTIR, DTA and SEM. The adsorption experiments were conducted in a fluidized bed circulation column. Adsorption, isotherms and kinetic studies were established under 180 min operating process time, at different initial 2.4-DCP solution concentrations ranging from 5–10 mg/L, and at different flow rates ranging from 0.25–0.75 L/min. The data obtained fitted well for both the Langmuir and Freundlich isotherm models; indicating favorable condition of monolayer adsorption. The kinetics of both adsorbents complies with the pseudo second-order kinetic model. BC was proven a new effective composite and low cost adsorbent which can be applied in the field of wastewater treatment, and it can also play an important role in industry water treatment

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Groundwater and Surface Water Flow (GSFLOW) model files to explore bedrock circulation depth and porosity in Copper Creek, Colorado

This data package contains integrated hydrological model input and output files for Copper Creek, Colorado (24 km2), a tributary of the East River located in the headwaters of the Upper Colorado River Basin. The model code is the U.S. Geological Survey (USGS) Groundwater and Surface Water Flow (GSFLOW) model. The model contains a 100-m grid resolution and a daily timestep. The land surface model is dynamically linked to a three-dimensional groundwater flow model that allows for streamflow gaining and losing conditions. The groundwater model contains 12 model layers and extends 400 m below land surface. The original Copper Creek model was modified to contain geologic layers representing saprolite, shallow bedrock, and deep bedrock. Endmember depth versus hydraulic conductivity relationships and porosity values for fractured crystalline rock are simulated. For the shallow case, median flow depths occur in the shallow saprolite at depths <8 m, while the deep case promotes a median groundwater flow depth of 100 m. With this modeling framework we compare streamflow response to a plausible worst-case drought lasting up to five years. Streamflow metrics of analysis include average streamflow, fraction of stream network that is dry, no-flow duration, average groundwater flow to streams and time to recovery following the drought. Results and implications are presented in a paper submitted to Geophysical Research Letters titled, "The role of bedrock circulation depth and porosity in mountain streamflow response to prolonged drought" by Rosemary WH. Carroll, Andrew H. Manning and Kenneth H Williams. A Readme.txt file provides instructions on how to download all model files and execute each model scenario. In addition to the GSFLOW output/prms/copper_drought.csv file containing daily basin water stores and fluxes (refer to GSFLOW manual) and the output/prms/copper_drought_statvar.dat file with output defined in the gsflow3.control file (refer to GSFLOW Manual), output files also include spatially distributed daily values of total evapotranspiration, canopy evaporation, precipitation, snowfall, infiltration, snow water equivalent, potential evapotranspiration, recharge, sublimation, soil moisture, contributing interflow, water table elevations, changes in groundwater storage, groundwater evapotranspiration, interbasin groundwater flow (limited to the alluvium below the stream outlet), and surface-groundwater exchanges within the river system.

54 ENVIRONMENTAL SCIENCES↗

Circulating Hematopoietic Stem and Progenitor Cells in Aging Atomic Bomb Survivors

It is not yet known whether hematopoietic stem and progenitor cells (HSPCs) are compromised in the aging population of atomic bomb (A-bomb) survivors after their exposure nearly 70 years ago. To address this, we evaluated age- and radiation-related changes in different subtypes of circulating HSPCs among the CD34-positive/lineage marker-negative (CD34+Lin - ) cell population in 231 Hiroshima A-bomb survivors. We enumerated functional HSPC subtypes, including: cobblestone area-forming cells; long-term culture-initiating cells; erythroid burst-forming units; granulocyte and macrophage colony-forming units; and T-cell and natural killer cell progenitors using cell culture. We obtained the count of each HSPC subtype per unit volume of blood and the proportion of each HSPC subtype in CD34+Lin - cells to represent the lineage commitment trend. Multivariate analyses, using sex, age and radiation dose as variables, showed significantly decreased counts with age in the total CD34+Lin - cell population and all HSPC subtypes. As for the proportion, only T-cell progenitors decreased significantly with age, suggesting that the commitment to the T-cell lineage in HSPCs continuously declines with age throughout the lifetime. However, neither the CD34+Lin - cell population, nor HSPC subtypes showed significant radiation-induced dose-dependent changes in counts or proportions. Moreover, the correlations of the proportions among HSPC subtypes in the survivors properly revealed the hierarchy of lineage commitments. In conclusion, taken together, our findings suggest that many years after exposure to radiation and with advancing age, the number and function of HSPCs in living survivors as a whole may have recovered to normal levels.

59 BASIC BIOLOGICAL SCIENCES↗

Ferrite-Free Circulator for Precise Measurements of SRF Cavities with High Q-Factor

In this work, we suggest and investigate new magnetless circulators based on three resonators connected in a loop and parametrically modulated in time with mutual phase lag. The first design consists of three Fano resonators with a spectrally asymmetric response, in contrast to schemes based on the Lorentz resonators explored thus far. The second design includes three Fano-Lorentz resonators, i.e., it also possesses spatial asymmetry. We demonstrate that the asymmetric approach provides strong and reversible isolation for the practically feasible modulation amplitude and rate. The results of our work are promising for precise measurements of superconducting radio frequency cavities with high Q-factor.

43 PARTICLE ACCELERATORS↗

Circulating tumor cells: potential markers of minimal residual disease in ovarian cancer? a study of the OVCAD consortium

Purpose: In 75% of ovarian cancer patients the tumor mass is completely eradicated by established surgical and cytotoxic treatment; however, the majority of the tumors recur within 24 months. Here we investigated the role of circulating tumor cells (CTCs) indicating occult tumor load, which remains inaccessible by established diagnostics. Experimental design: Blood was taken at diagnosis (baseline samples, n = 102) and six months after completion of adjuvant first-line chemotherapy (follow-up samples; n = 78). CTCs were enriched by density gradient centrifugation. A multimarker immunostaining was established and further complemented by FISH on CTCs and tumor/metastasis tissues using probes for stem-cell like fusion genes MECOM and HHLA1. Results: CTCs were observed in 26.5% baseline and 7.7% follow-up blood samples at a mean number of 12.4 and 2.8 CTCs per ml blood, respectively. Baseline CTCs indicated a higher risk of death in R0 patients with complete gross resection (univariate: HR 2.158, 95% CI 1.111–4.191, p = 0.023; multivariate: HR 2.720, 95% CI 1.340–5.522, p = 0.006). At follow-up, the presence of CTCs was associated with response to primary treatment as assessed using RECIST criteria. Chromosomal gains at MECOM and HHLA1 loci suggest that the observed cells were cancer cells and reflect pathophysiological decisive chromosomal aberrations of the primary and metastatic tumors.

59 BASIC BIOLOGICAL SCIENCES↗

Assessment of Lost Circulation Material Particle-Size Distribution on Fracture Sealing: A Numerical Study

Summary Lost circulation materials (LCMs) are essential to combat fluid loss while drilling and may put the whole operation at risk if a proper LCM design is not used. The focus of this research is understanding the function of LCMs in sealing fractures to reduce fluid loss. One important consideration in the success of fracture sealing is the particle-size distribution (PSD) of LCMs. Various studies have suggested different guidelines for obtaining the best size distribution of LCMs for effective fracture sealing based on limited laboratory experiments or field observations. Hence, there is a need for sophisticated numerical methods to improve the LCM design by providing some predictive capabilities. In this study, computational fluid dynamics (CFD) and discrete element methods (DEM) numerical simulations are coupled to investigate the influence of PSD of granular LCMs on fracture sealing. Dimensionless variables were introduced to compare cases with different PSDs. We validated the CFD-DEM model in reproducing specific laboratory observations of fracture-sealing experiments within the model boundary parameters. Our simulations suggested that a bimodally distributed blend would be the most effective design in comparison to other PSDs tested here.

Engineering↗

Compaction and Morphology of Lost Circulation Materials

Lost circulation material (LCM) selection is critical to effectively and efficiently treating wellbore fluid losses in geothermal drilling where costs of treatment can be as much as 30% of the total drilling cost. We conducted several uniaxial compaction experiments on 10 different materials and several material mixtures to identify critical mechanical parameters of each. Materials degraded at 200°C were also investigated to understand how elevated temperatures in geothermal wells would degrade their compaction behavior. Granular materials tended to have lower compressibility and higher compression resistance, while more elongated and softer materials had less mechanical stiffness. Mixing materials tended to moderate the mechanical behaviors while heating universally increased the compaction of materials. Microscopy showed that particle strength tended to correlate positively with roundness and circularity and negatively with elongation of a material. Convexity of the degraded and undegraded materials showed heating may have increased the convexity or roughness of the individual particles. In conclusion, we concluded that granular materials are likely to provide the best seals in wells but that a mixture of size distribution, mechanical rigidity, and elongation is more likely to form a better seal for geothermal wells.

annular pressure drilling↗

Selection of representative general circulation models under climatic uncertainty for Western North America

Abstract Climate change research uses an ensemble of general circulation model runs (GCMs-runs) to predict future climate under uncertainties. To reduce computational costs, this study selects representative GCM-runs (RGCM-runs) for Western North America (WNA) based on their performance in replicating historical climate conditions from 1981 to 2005 and projecting future changes from 1981–2010 to 2071–2100. This evaluation is conducted under two representative concentration pathways (RCPs) scenarios, RCP4.5 and RCP8.5, from the Coupled Model Intercomparison Project 5. By using an envelope-based selection technique and a multi-objective distance-based approach, we identify four RGCM-runs per RCP representing diverse climatic conditions, including wet-warm, wet-cold, dry-warm, and dry-cold. Compared to the full-set, these selected runs show a decreased mean absolute error (MAE) between the reference and RGCM-runs concerning the monthly average mean air temperature (T̄) and precipitation (P̄). For RCP4.5, T̄ MAE is 0.45 (vs. 0.58 in the full-set) and P̄ MAE is 0.31 (vs. 0.42). For RCP8.5, T̄ MAE is 0.51 (vs. 0.75) and P̄ MAE is 0.25 (vs. 0.36). The lower MAE values in the RGCM-run set indicate closer alignment between predicted and reference values, making the RGCM-run suitable for climate impact assessments in the region.

Water Resources↗

Use of ARM observations and numerical models to determine radiative and latent heating profiles of mesoscale convective systems for general circulation models

This three-year project, in cooperation with Professor Bob Houze at University of Washington, has been successfully finished as planned. Both ARM (the Atmospheric Radiation Measurement Program) data and cloud-resolving model (CRM) simulations were used to identify the water budgets of clouds observed in two international field campaigns. The research results achieved shed light on several key processes of clouds in climate change (or general circulation models).

58 GEOSCIENCES↗

"What Controls the Structure and Stability of the Ocean Meridional Overturning Circulation: Implications for Abrupt Climate Change?"

The central goal of this research project is to understand the properties of the ocean meridional overturning circulation (MOC) – a topic critical for understanding climate variability and stability on a variety of timescales (from decadal to centennial and longer). Specifically, we have explored various factors that control the MOC stability and decadal variability in the Atlantic and the ocean thermal structure in general, including the possibility abrupt climate change. We have also continued efforts on improving the performance of coupled ocean-atmosphere GCMs.

54 ENVIRONMENTAL SCIENCES↗

Wave Energy Converter (WEC) Array Effects on Wave Current and Sediment Circulation: Monterey Bay CA.

The goal s of this study were to develop tools to quantitatively characterize environments where wave energy converter ( WEC ) devices may be installed and to assess e ffects on hydrodynamics and lo cal sediment transport. A large hypothetical WEC array was investigated using wave, hydrodynamic, and sediment transport models and site - specific average and storm conditions as input. The results indicated that there were significant changes in sediment s izes adjacent to and in the lee of the WEC array due to reduced wave energy. The circulation in the lee of the array was also altered; more intense onshore currents were generated in the lee of the WECs . In general, the storm case and the average case show ed the same qualitative patterns suggesting that these trends would be maintained throughout the year. The framework developed here can be used to design more efficient arrays while minimizing impacts on nearshore environmen ts.

Roberts, Jesse D.↗

Polarized 3He Gas Circulating Technologies for Neutron Analyzers

We describe the development of an integrated system for quasi-continuous operation of a large volume neutron analyzer. The system consists of a non-magnetic diaphragm compressor, a prototype large volume helium polarizer, a surrogate neutron analyzer, a non-depolarizing gas storage reservoir, a non-ferrous valve manifold for handling gas distribution, a custom rubidium-vapor gas return purifier, and wire-wound transfer lines, all of which are immersed in a two-meter external magnetic field. Over the Phase II period we focused on three major tasks required for the successful deployment of these types of systems: 1) design and implementation of gas handling hardware, 2) automation for long-term operation, and 3) improvements in polarizer performance, specifically fabrication of aluminosilicate optical pumping cells. In this report we describe the design, implementation, and testing of the gas handling hardware. We describe improved polarizer performance resulting from improved cell materials and fabrication methods. These improvements yielded valved 8.5 liter cells with relaxation times greater than 12 hours. Pumping this cell with 1500W laser power with 1.25nm linewidth yielded peak polarizations of 60%, measured both inside and outside the polarizer. Fully narrowing this laser to 0.25nm, demonstrated separately on one stack of the four, would have allowed 70% polarization with this cell. We demonstrated the removal of 5 liters of polarized helium from the polarizer with no measured loss of polarization. We circulated the gas through a titanium-clad compressor with polarization loss below 3% per pass. We also prepared for the next phase of development by refining the design of the polarizer so that it can be engineer-certified for pressurized operation. The performance of our system far exceeds comparable efforts elsewhere.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Abrupt Climate Change and the Atlantic Meridional Overturning Circulation: sensitivity and non-linear response to Arctic/sub-Arctic freshwater pulses. Collaborative research. Final report

This project investigated possible mechanisms by which melt-water pulses can induce abrupt change in the Atlantic Meridional Overturning Circulation (AMOC) magnitude. AMOC magnitude is an important ingredient in present day climate. Previous studies have hypothesized abrupt reduction in AMOC magnitude in response to influxes of glacial melt water into the North Atlantic. Notable fresh-water influxes are associated with the terminus of the last ice age. During this period large volumes of melt water accumulated behind retreating ice sheets and subsequently drained rapidly when the ice weakened sufficiently. Rapid draining of glacial lakes into the North Atlantic is a possible origin of a number of paleo-record abrupt climate shifts. These include the Younger-Dryas cooling event and the 8,200 year cooling event. The studies undertaken focused on whether the mechanistic sequence by which glacial melt-water impacts AMOC, which then impacts Northern Hemisphere global mean surface temperature, is dynamically plausible. The work has implications for better understanding past climate stability. The work also has relevance for today’s environment, in which high-latitude ice melting in Greenland appears to be driving fresh water outflows at an accelerating pace.

58 GEOSCIENCES↗

High Resolution Model Development to Quantify the Impact of Icebergs on the Stability of the Atlantic Meridional Overturning Circulation

In the present-day North Atlantic Ocean, relatively warm and salty water moves northwards from the tropics to the high latitudes, sinks, and returns southward towards the equator as North Atlantic Deep Water, forming the so called Atlantic Meridional Overturning Circulation (AMOC). It has been found that the stability of the AMOC is non-linearly related to the freshwater budget of the North Atlantic. In this way, additional fresh water can be added to the ocean with little impact, until a tipping point is reached that causes the AMOC to suddenly weaken and the Northern Hemisphere to abruptly cool. A great deal of uncertainty still remains over the sensitivity of the AMOC to changes in freshwater discharge as a result of the unrealistic manner in which freshwater has historically been added to climate models. Frequently, freshwater is discharged in ocean models entirely as liquid water, but in reality a large fraction of freshwater entering the ocean is ice calving from marine glaciers (half for Antarctica and two-thirds for Greenland). To more accurately quantify AMOC sensitivity to past and future changes in freshwater input, this project developed a comprehensive iceberg model to more realistically simulate the interaction between the cryosphere and the oceans at high-latitudes. The iceberg model created is written in Fortran90 and designed to scale efficiently on High Performance Computing (HPC) clusters so that tens-of-thousands of icebergs can be simulated at any time. Experiments performed with our model showed that in the Pleistocene there would have been enormous floods of freshwater released into the North Atlantic that would have transported icebergs and meltwater along the entire east coast of the United States, as far south as Florida Keys. In addition, high-resolution, modern-day, model simulations showed that if the Greenland Ice Sheet continues to melt at its current rate then there will be a 6-fold increase in the number of icebergs drifting in the North Atlantic in the next 30 years, and that the strength of the AMOC could weaken by 3.5%.

54 ENVIRONMENTAL SCIENCES↗

NEK5000 Assessment Milestone Report: Single-Phase Natural Circulation using Direct Numerical Simulation (DNS) & Large Eddy Simulation (LES) Methods

This study evaluates the capabilities of the NEK5000 open-source code as an alternative to the commercially available software that is currently heavily relied upon. The first three case studies initiated the author with (1) the syntax and flow of the program, (2) varying initial and boundary conditions and (3) geometries of greater complexity & dimension. Case 1 studies transient conjugate heat transfer in the entry region of a pipe. Cases 2 & 3 simulate the natural convection flow in an enclosed differentially heated cavity (DHC) of two and three dimensions, respectively. The final case study, Case 4, produces three-dimensional single-phase natural convective flow using the Boussinesq approximation within a simplified representation of an aqueous homogeneous reactor system. The Boussinesq flow in Case 4 clearly depicts both Rayleigh-Taylor and Kelvin-Helmholtz instabilities qualitatively during post-processing analysis. Further analysis of Case 4, up to the point of a quasi-steady state (i.e. thermal-equilibrium condition), is done using the LES solver method in NEK5000. The volume-averaged solution temperatures, when compared between solvers, showed no significant difference. Due to its minimal compromise in fidelity of solution resolution and inexpensive computing cost, compared to the DNS solver, the LES solver is recommended for the current application. Methodology development for the four case studies are reported and a preliminary optimization study with different polynomial resolutions for Case 4 is addressed as a resource when performing future simulations using NEK5000. Hence, this report can be used as a reference starting point to the end user of NEK5000 for natural circulation phenomena in nuclear reactor safety applications.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗