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At least 919 records · Page 51

A mass-transfer particle-tracking method for simulating transport with discontinuous diffusion coefficients

The problem of a spatially discontinuous diffusion coefficient (D(x)) is one that may be encountered in hydrogeologic systems due to natural geological features or as a consequence of numerical discretization of flow properties. To date, mass-transfer particle-tracking (MTPT) methods, a family of Lagrangian methods in which diffusion is jointly simulated by random walk and diffusive mass transfers, have been unable to solve this problem. This manuscript presents a new mass-transfer (MT) algorithm that enables MTPT methods to accurately solve the problem of discontinuous D(x). To achieve this, we derive a semi-analytical solution to the discontinuous D(x) problem by employing a predictor-corrector approach, and we use this semi-analytical solution as the weighting function in a reformulated MT algorithm. Furthermore, this semi-analytical solution is generalized for cases with multiple 1D interfaces as well as for 2D cases, including a 2 × 2 tiling of 4 subdomains that corresponds to a numerically-generated diffusion field. The solutions generated by this new mass-transfer algorithm closely agree with an analytical 1D solution or, in more complicated cases, trusted numerical results, demonstrating the success of our proposed approach.

42 ENGINEERING↗

Operator inference for non-intrusive model reduction of systems with non-polynomial nonlinear terms

Here in this work we present a non-intrusive model reduction method to learn low-dimensional models of dynamical systems with non-polynomial nonlinear terms that are spatially local and that are given in analytic form. In contrast to state-of-the-art model reduction methods that are intrusive and thus require full knowledge of the governing equations and the operators of a full model of the discretized dynamical system, the proposed approach requires only the non-polynomial terms in analytic form and learns the rest of the dynamics from snapshots computed with a potentially black-box full-model solver. The proposed method learns operators for the linear and polynomially nonlinear dynamics via a least-squares problem, where the given non-polynomial terms are incorporated on the right-hand side. The least-squares problem is linear and thus can be solved efficiently in practice. The proposed method is demonstrated on three problems governed by partial differential equations, namely the diffusion–reaction Chafee–Infante model, a tubular reactor model for reactive flows, and a batch-chromatography model that describes a chemical separation process. The numerical results provide evidence that the proposed approach learns reduced models that achieve comparable accuracy as models constructed with state-of-the-art intrusive model reduction methods that require full knowledge of the governing equations.

42 ENGINEERING↗

Single Doppler radar and lidar studies of the dynamics of mixed layers and overlying stable regions

Some examples of profiles of PBL quantities retrieved from Doppler radar and lidar observations are shown, and the extent to which the deduced quantities agree with the traditional eddy viscosity concept is examined. It is found in one case that the concept of 'top down bottom up' diffusion introduced by Wyngaard (1983) is more pertinent than that of the eddy viscosity. In another case it is found that, in stable layers with sufficiently large Richardson number, the momentum fluxes could be counter-gradient. In this latter case the use of a negative turbulence diffusion coefficient would result in an ill-posed differential equation, thus confusing the 'diffusion problem'.

Xu, Mei↗

Injection and diffusive transport of suprathermal through energetic solar flare protons (35 keV to 20 MeV)

Consideration is given to the injection and interplanetary propagation of low-energy protons caused by the solar particle event of July 20, 1981, in which flare protons in the range from 35 keV to 20 MeV were observed by instruments on ISEE 3. The observed time-intensity and time-anisotropy profiles were fitted over the entire energy range using a model based on the spherically symmetric Fokker-Plank equation, including convection, diffusion, and adiabatic deceleration. The results are used to discuss the behavior of the radial interplanetary diffusion coefficient and the scattering mean free path for protons. Also, evidence is found for diffusive coronal shock acceleration of protons during the event.

Beeck, J.↗

Wave theory of turbulence in compressible media (acoustic theory of turbulence)

The generation and the transmission of sound in turbulent flows are treated as one of the several aspects of wave propagation in turbulence. Fluid fluctuations are decomposed into orthogonal Fourier components, with five interacting modes of wave propagation: two vorticity modes, one entropy mode, and two acoustic modes. Wave interactions, governed by the inhomogeneous and nonlinear terms of the perturbed Navier-Stokes equations, are modeled by random functions which give the rates of change of wave amplitudes equal to the averaged interaction terms. The statistical framework adopted is a quantum-like formulation in terms of complex distribution functions. The spatial probability distributions are given by the squares of the absolute values of the complex characteristic functions. This formulation results in nonlinear diffusion-type transport equations for the probability densities of the five modes of wave propagation.

Kentzer, C. P.↗

Analytical Modeling of Operating Characteristics of Premixing-prevaporizing Fuel-air Mixing Passages

A model for predicting the distribution of liquid fuel droplets and fuel vapor in premixing-prevaporizing fuel-air mixing passages of the direct injection type is described. This model consists of three computer programs: a calculation of the two dimensional or axisymmetric air flow field neglecting the effects of fuel; a calculation of the three dimensional fuel droplet trajectories and evaporation rates in a known, moving air flow; and a calculation of fuel vapor diffusing into a moving three dimensional air flow with source terms dependent on the droplet evaporation rates. The air flow calculation can treat compressible swirling flows in arbitrary ducts with arbitrary distributions of temperature and velocity as initial conditions. The fuel droplets are treated as initial conditions. The fuel droplets are treated as individual particle classes each satisfying Newton's law, a heat transfer, and a mass transfer equation. The vapor diffusion calculation treats three dimensional, gas phase, turbulent diffusion processes with the turbulence level determined by the air flow calculations and the source terms determined by the droplet evaporation rates.

Anderson, O. L.↗

Pitch angle diffusion in the Jovian magnetodisc

Using a linear approximation to the field variation and a mathematical technique for distorting the orbit integration into the complex gyrophase plane, a formula is derived for the nonadiabatic change in magnetic moment. This change varies as the cosine of the particle gyrophase at the equator, so that if a particle traverses the equator several times with different values of this gyrophase, it suffers randomly correlated values for the nonadiabatic change in magnetic moment. The algebraic formula for this nonadiabatic change is found to be in excellent agreement with previous numerical computations. The phase space density, averaged over several bounce periods, is found to satisfy a diffusion equation in pitch angle. The diffusion coefficient is dependent on particle energy, pitch angle, and the field line along which the particles are moving.

Birmingham, T. J.↗

A model for discrete fracture-clay rock interaction incorporating electrostatic effects on transport

Abstract A model based on the code CrunchClay is presented for a fracture-clay matrix system that takes electrostatic effects on transport into account. The electrostatic effects on transport include those associated with the development of a diffusion potential as captured by the Nernst-Planck equation, and the formation of a diffuse layer bordering negatively charged clay particles within which partial anion exclusion occurs. The model is based on a dual continuum formulation that accounts for diffuse layer and bulk water pore space, providing a more flexible framework than is found in the classical mean electrostatic potential models. The diffuse layer model is obtained by volume averaging ion concentrations in the Poisson-Boltzmann equation, but also includes the treatment of longitudinal transport within this continuum. The calculation of transport within the bulk and diffuse layer porosity is based on a new formulation for the Nernst-Planck equation that considers averaging of diffusion coefficients and accumulation factors at grid cell interfaces. Equations for function residuals and the associated Jacobian matrix are presented such that the system of nonlinear differential-algebraic equations can be solved with Newton’s method. As an example, we consider a 2D system with a single discrete fracture within which flow and advective transport occurs that is coupled to diffusion in the clay-rich matrix. The simulation results demonstrate the lack of retardation for anions (e.g., 36 Cl − ) of the contaminant plume within the fracture flow system because they are largely excluded from the charged clay rock, while the migration of cations (e.g., 90 Sr ++ ) is more strongly attenuated. The diffusive loss of divalent cations in particular from the fracture is accentuated by their accumulation in the diffuse layer within the clay-rich matrix.

58 GEOSCIENCES↗

Merging of the superbanana plateau and $\sqrt{v}$ transport regimes in nearly quasisymmetric stellarators

We report alpha particle confinement is one of the most demanding issues for stellarators. It now seems clear that it is possible to design optimized stellarators that confine the background plasma at near tokamak radial transport levels. Moreover, adequate collisionless alpha particle confinement is possible in the core of a highly optimized stellarator. Here, the collisional confinement of barely trapped alphas in an optimized stellarator is considered by accounting for the resonance due to the reversal in direction of the drift within a flux surface and investigating the sensitive role of magnetic shear in keeping this resonance close to the passing boundary in some nearly quasisymmetric stellarator configurations. The treatment relies on a narrow collisional boundary layer formulation that combines the responses of both these resonant pitch angle alphas and the remaining barely trapped alphas. A novel merged regime treatment leads to explicit expressions for the energy diffusivity for both superbanana plateau (or resonant plateau) and $\sqrt{v}$ transport in the large aspect ratio limit for a slowing down tail alpha distribution function, where v is the effective pitch angle scattering collision frequency of the trapped alphas off the background ions. Depending on the details of the optimization scheme and the sign of the magnetic shear, modest magnetic shear can be used to reduce superbanana (or resonant) plateau transport to below the $\sqrt{v}$ transport level. In addition, a quasilinear equation retaining spatial diffusion is derived for a general alpha distribution function that allows the radial alpha transport to modify the distribution so it is no longer isotropic in velocity space.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Diffusion length measurements in bulk and epitaxially grown 3-5 semiconductors using charge collection microscopy

Diffusion lengths and surface recombination velocities were measured in GaAs diodes and InP finished solar cells. The basic techniques used was charge collection microscopy also known as electron beam induced current (EBIC). The normalized currents and distances from the pn junction were read directly from the calibrated curves obtained while using the line scan mode in an SEM. These values were then equated to integral and infinite series expressions resulting from the solution of the diffusion equation with both extended generation and point generation functions. This expands previous work by examining both thin and thick samples. The surface recombination velocity was either treated as an unknown in a system of two equations, or measured directly using low e(-) beam accelerating voltages. These techniques give accurate results by accounting for the effects of surface recombination and the finite size of the generation volume.

Leon, R. P.↗

Diffusion length measurement in bulk and epitaxially grown III-V semiconductors using charge collection microscopy

Diffusion lengths and surface recombination velocities were measured in GaAs diodes and InP finished solar cells. The basic technique used was charge collection microscopy, also known as electron beam induced current (EBIC). The normalized currents and distances from the pn junction were read directly from the calibrated curves obtained while using the line-scan mode in an SEM. These values were then equated to integral and infinite series expressions resulting from the solution of the diffusion equation with both extended-generation and point-generation functions. This expands previous work by examining both thin and thick samples. The surface recombination velocity was either treated as an unknown in a system of two equations or measured directly using low e(-) beam accelerating voltages. These techniques give accurate results by accounting for the effects of surface recombination and the finite size of the generation volume.

Leon, R. P.↗

An Integrated Approach to Parameter Learning in Infinite-Dimensional Space

The availability of sophisticated modern physics codes has greatly extended the ability of domain scientists to understand the processes underlying their observations of complicated processes, but it has also introduced the curse of dimensionality via the many user-set parameters available to tune. Many of these parameters are naturally expressed as functional data, such as initial temperature distributions, equations of state, and controls. Thus, when attempting to find parameters that match observed data, being able to navigate parameter-space becomes highly non-trivial, especially considering that accurate simulations can be expensive both in terms of time and money. Existing solutions include batch-parallel simulations, high-dimensional, derivative-free optimization, and expert guessing, all of which make some contribution to solving the problem but do not completely resolve the issue. In this work, we explore the possibility of coupling together all three of the techniques just described by designing user-guided, batch-parallel optimization schemes. Our motivating example is a neutron diffusion partial differential equation where the time-varying multiplication factor serves as the unknown control parameter to be learned. We find that a simple, batch-parallelizable, random-walk scheme is able to make some progress on the problem but does not by itself produce satisfactory results. After reducing the dimensionality of the problem using functional principal component analysis (fPCA), we are able to track the progress of the solver in a visually simple way as well as viewing the associated principle components. This allows a human to make reasonable guesses about which points in the state space the random walker should try next. Thus, by combining the random walker's ability to find descent directions with the human's understanding of the underlying physics, it is possible to use expensive simulations more efficiently and more quickly arrive at the desired parameter set.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Numerical simulation of electrophoresis separation processes

A new Petrov-Galerkin finite element formulation has been proposed for transient convection-diffusion problems. Most Petrov-Galerkin formulations take into account the spatial discretization, and the weighting functions so developed give satisfactory solutions for steady state problems. Though these schemes can be used for transient problems, there is scope for improvement. The schemes proposed here, which consider temporal as well as spatial discretization, provide improved solutions. Electrophoresis, which involves the motion of charged entities under the influence of an applied electric field, is governed by equations similiar to those encountered in fluid flow problems, i.e., transient convection-diffusion equations. Test problems are solved in electrophoresis and fluid flow. The results obtained are satisfactory. It is also expected that these schemes, suitably adapted, will improve the numerical solutions of the compressible Euler and the Navier-Stokes equations.

Ganjoo, D. K.↗

Specular reflection treatment for the 3D radiative transfer equation solved with the discrete ordinates method

The contribution of this paper relies in the development of numerical algorithms for the mathematical treatment of specular reflection on borders when dealing with the numerical solution of radiative transfer problems. The radiative transfer equation being integro-differential, the discrete ordinates method allows to write down a set of semi-discrete equations in which weights are to be calculated. The calculation of these weights is well known to be based on either a quadrature or on angular discretization, making the use of such method straightforward for the state equation. Also, the diffuse contribution of reflection on borders is usually well taken into account. However, the calculation of accurate partition ratio coefficients is much more tricky for the specular condition applied on arbitrary geometrical borders. This paper presents algorithms that calculate analytically partition ratio coefficients needed in numerical treatments. The developed algorithms, combined with a decentered finite element scheme, are validated with the help of comparisons with analytical solutions before being applied on complex geometries.

97 MATHEMATICS AND COMPUTING↗

Elastic wave propagation in a highly scattering medium - A diffusion approach

The propagation of elastic waves in the moon, where the first seismograms were characterized by the presence of a long coda attributed to strongly scattered waves, is modeled with the aid of the time-dependent equation of radiative transfer. The average energy density as a function of time and space is described by the diffusion equation with linear dissipation on the assumption that all the energy present has been scattered many times and the time and distance scales of the problem are long compared to the scales of the scattering process. Ultrasonic experiments in the laboratory confirm the applicability of the formalism.

Dainty, A. M.↗

Enhancing statistical moment calculations for stochastic Galerkin solutions with Monte Carlo techniques

Here, we provide a method for enhancing stochastic Galerkin moment calculations to the linear elliptic equation with random diffusivity using an ensemble of Monte Carlo solutions. This hybrid approach combines the accuracy of low-order stochastic Galerkin and the computational efficiency of Monte Carlo methods to provide statistical moment estimates which are significantly more accurate than performing each method individually. The hybrid approach involves computing a low-order stochastic Galerkin solution, after which Monte Carlo techniques are used to estimate the residual. We show that the combined stochastic Galerkin solution and residual is superior in both time and accuracy for a one-dimensional test problem and a more computational intensive two-dimensional linear elliptic problem for both the mean and variance quantities.

97 MATHEMATICS AND COMPUTING↗

Stochastic simulation of reaction-diffusion systems: A fluctuating-hydrodynamics approach

Here, we develop numerical methods for stochastic reaction-diffusion systems based on approaches used for fluctuating hydrodynamics (FHD). For hydrodynamic systems, the FHD formulation is formally described by stochastic partial differential equations (SPDEs). In the reaction-diffusion systems we consider, our model becomes similar to the reaction-diffusion master equation (RDME) description when our SPDEs are spatially discretized and reactions are modeled as a source term having Poisson fluctuations. However, unlike the RDME, which becomes prohibitively expensive for an increasing number of molecules, our FHD-based description naturally extends from the regime where fluctuations are strong, i.e., each mesoscopic cell has few (reactive) molecules, to regimes with moderate or weak fluctuations, and ultimately to the deterministic limit. By treating diffusion implicitly, we avoid the severe restriction on time step size that limits all methods based on explicit treatments of diffusion and construct numerical methods that are more efficient than RDME methods, without compromising accuracy. Guided by an analysis of the accuracy of the distribution of steady-state fluctuations for the linearized reaction-diffusion model, we construct several two-stage (predictor-corrector) schemes, where diffusion is treated using a stochastic Crank-Nicolson method, and reactions are handled by the stochastic simulation algorithm of Gillespie or a weakly second-order tau leaping method. We find that an implicit midpoint tau leaping scheme attains second-order weak accuracy in the linearized setting and gives an accurate and stable structure factor for a time step size of an order of magnitude larger than the hopping time scale of diffusing molecules. We study the numerical accuracy of our methods for the Schlögl reaction-diffusion model both in and out of thermodynamic equilibrium. We demonstrate and quantify the importance of thermodynamic fluctuations to the formation of a two-dimensional Turing-like pattern and examine the effect of fluctuations on three-dimensional chemical front propagation. Furthermore, by comparing stochastic simulations to deterministic reaction-diffusion simulations, we show that fluctuations accelerate pattern formation in spatially homogeneous systems and lead to a qualitatively different disordered pattern behind a traveling wave.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗