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NASA NTRSDate not supplied

Combining RNA-SEQ Datasets from NASA GENELAB: An Evaluation of Correction Methods

Background: Conducting space biology experiments aboard the International Space Station, particularly those utilizing complex model organisms like mice, is expensive and difficult due to limited crew availability, hardware, and space. As a result, sample numbers from these studies are low, reducing the statistical power of any one experiment. Aggregating spaceflight datasets serves as a method to increase sample numbers, allowing for novel insights through bioinformatic analysis of ‘omics data from merged datasets. However, aggregating datasets can introduce unwanted variation including 1) differences in sample handling, processing, and sequencing platforms between datasets (technical variation) as well as 2) differences in experimental design between datasets. Methods: In the present study, NASA GeneLab-hosted RNAseq datasets from mouse liver tissues were used to evaluate several statistical methods to correct for this unwanted variation through two approaches, reference-based and standard. The following correction algorithms were applied with (reference-based) and/or without (standard) considering Universal Mouse RNA Reference samples: ComBat and ComBat_seq from the SVA package, the median polish, empirical Bayes, and ANOVA-based algorithms from the MBatch package, and negative binomial regression normalization in the DESeq2 package. For each approach, after the correction algorithm was applied, differential gene expression (DGE) analysis of flight and ground control samples was performed with the combined data. The robustness of each tool was evaluated using BatchQC to determine statistical differences between datasets before and after correction, Principal Component Analysis to evaluate global gene expression in samples before and after correction, and by comparing DGE analysis of individual datasets and combined datasets before and after correction. Results: The results showed that the reference-based approach introduced several additional (and likely artificial) differentially expressed genes when compared with the respective standard approach. Conclusions: Of the methods tested, standard ComBat_seq and DESeq2 were identified as the most robust correction methods for combining spaceflight mouse liver RNAseq datasets hosted on GeneLab.

Finsam Samson↗

NASA NTRS1999

An Evaluation of Aircraft Emissions Inventory Methodology by Comparisons with Reported Airline Data

This report provides results of work done to evaluate the calculation methodology used in generating aircraft emissions inventories. Results from the inventory calculation methodology are compared to actual fuel consumption data. Results are also presented that show the sensitivity of calculated emissions to aircraft payload factors. Comparisons of departures made, ground track miles flown and total fuel consumed by selected air carriers were made between U.S. Dept. of Transportation (DOT) Form 41 data reported for 1992 and results of simplified aircraft emissions inventory calculations. These comparisons provide an indication of the magnitude of error that may be present in aircraft emissions inventories. To determine some of the factors responsible for the errors quantified in the DOT Form 41 analysis, a comparative study of in-flight fuel flow data for a specific operator's 747-400 fleet was conducted. Fuel consumption differences between the studied aircraft and the inventory calculation results may be attributable to several factors. Among these are longer flight times, greater actual aircraft weight and performance deterioration effects for the in-service aircraft. Results of a parametric study on the variation in fuel use and NOx emissions as a function of aircraft payload for different aircraft types are also presented.

Daggett, D. L.↗

NASA NTRS2012

The Fermi Large Area Telescope on Orbit: Event Classification, Instrument Response Functions, and Calibration

The Fermi Large Area Telescope (Fermi-LAT, hereafter LAT), the primary instrument on the Fermi Gamma-ray Space Telescope (Fermi) mission, is an imaging, wide field-of-view, high-energy -ray telescope, covering the energy range from 20 MeV to more than 300 GeV. During the first years of the mission the LAT team has gained considerable insight into the in-flight performance of the instrument. Accordingly, we have updated the analysis used to reduce LAT data for public release as well as the Instrument Response Functions (IRFs), the description of the instrument performance provided for data analysis. In this paper we describe the effects that motivated these updates. Furthermore, we discuss how we originally derived IRFs from Monte Carlo simulations and later corrected those IRFs for discrepancies observed between flight and simulated data. We also give details of the validations performed using flight data and quantify the residual uncertainties in the IRFs. Finally, we describe techniques the LAT team has developed to propagate those uncertainties into estimates of the systematic errors on common measurements such as fluxes and spectra of astrophysical sources.

Ackermann, M.↗

NASA NTRSDate not supplied

Evaluation of Correction Methods for NASA GeneLab Transcriptomic Datasets

Conducting space biology experiments aboard the International Space Station, particularly those utilizing complex model organisms like mice, is expensive and difficult due to limited crew availability, hardware, and space. As a result, sample numbers from these studies are low, reducing the statistical power of any one experiment. Aggregating spaceflight datasets serves as a method to increase sample numbers, allowing for novel insights through bioinformatic analysis of ‘omics data from merged datasets. However, aggregating datasets can introduce unwanted variation including 1) differences in sample handling, processing, and sequencing platforms between datasets (technical variation) as well as 2) differences in experimental design between datasets such as sex or age of the model organism used. In the present study, NASA GeneLab-hosted RNAseq datasets from rodent liver tissues were used to evaluate several statistical methods to correct for this unwanted variation through two approaches, reference-based and standard. The following correction algorithms were applied with (reference-based) and/or without (standard) considering Universal Mouse RNA Reference samples: ComBat and ComBat_seq from the SVA package, median polish, empirical Bayes, and ANOVA-based algorithms from the MBatch package, and negative binomial regression normalization in the DESeq2 package. For each approach, after the correction algorithm was applied, differential gene expression (DGE) analysis of flight and ground control samples was performed with the combined data. The robustness of each tool was evaluated using BatchQC, to determine statistical differences between datasets before and after correction, Principal Component Analysis, to evaluate global gene expression in samples before and after correction, and by comparing DGE analysis of individual datasets and combined datasets before and after correction. The results showed that the reference-based approach introduced several additional (and likely artificial) DEGs when compared with the standard approach. Thus, the most robust standard correction will be implemented in the GeneLab Visualization 2.0 platform when datasets are combined.

GeneLab, RNA-seq, Batch Correction↗

NASA NTRSDate not supplied

Post-Flight Performance Analysis of Navigation and Advanced Guidance Algorithms on a Terrestrial Suborbital Rocket Flight

There is currently renewed interest in robotic and crewed landers for a return to the lunar surface. Advanced guidance and navigation algorithms are essential to accurately delivering cargo and crew safely to the moon successfully. This paper reports the overall performance of an integrated set of navigation and guidance algorithms flown on a terrestrial suborbital rocket up to an altitude of approximately 100km. The navigation algorithm consists of an onboard extended Kalman Filter (EKF) that ingests multiple sensor measurements, one of which is the output from a terrain relative navigation (TRN) algorithm that cross-references camera images to on-board satellite imagery to perform feature correlation within the camera image. The guidance algorithm solves for a 6-degree-of-freedom (DoF) optimal trajectory using a successive convexification method during powered descent. The altitude range as well as the landing dynamics experienced during this test flight are realistic for an extraterrestrial landing and provide an invaluable data set to gauge the current development of these landing algorithms in an effort to advance the overall software readiness levels (SRL). This paper will delve into different aspects of each algorithm and present an analysis of the in-flight performance of the algorithms. This flight was conducted under the National Aeronautics and Space Administration (NASA) Safe and Precise Landing Integrated Capabilities Evolution (SPLICE) project focused on technology advancement for landing applications.

Guidance↗

NASA NTRS2017

Examination of a Rotorcraft Noise Prediction Method and Comparison to Flight Test Data

With a view that rotorcraft noise should be included in the preliminary design process, a relatively fast noise prediction method is examined in this paper. A comprehensive rotorcraft analysis is combined with a noise prediction method to compute several noise metrics of interest. These predictions are compared to flight test data. Results show that inclusion of only the main rotor noise will produce results that severely underpredict integrated metrics of interest. Inclusion of the tail rotor frequency content is essential for accurately predicting these integrated noise metrics.

Boyd, D. Douglas, Jr.↗

NASA NTRSDate not supplied

A Framework for Assessing Earth Observation Metadata Quality: Implications for Data Discovery and Open Science

The Common Metadata Repository (CMR) contains metadata records describing NASA’s collection of over 8,000 Earth observation data products. The Analysis and Review of CMR (ARC) Team at Marshall Space Flight Center assesses the quality of these metadata records. Metadata, rather than the data itself, is indexed for search in both discipline-specific datacenters and global or aggregated catalogs (such as Earth data Search), making it essential for determining whether a data product is appropriate for a given research question or application need. Since metadata connects users to data, it should be as accurate and complete as possible in addition to meeting minimum database requirements. The ARC team has developed a metadata quality framework by which to assess quality. The framework consists of a set of quality criteria that converge around the dimensions of correctness, completeness, and consistency, with the goal of improving the discoverability, accessibility, and usability of NASA’s Earth Observation data. The application of the framework has resulted in a measurable improvement in NASA’s metadata quality. Key aspects of the framework’s success are the ability to systematically evaluate metadata and provide actionable quality improvement recommendations. Lessons learned from the project will be shared along with implementation details which may be relevant to other science disciplines. By aiming to make data more discoverable and accessible to a broad user community, the ARC metadata quality framework helps contribute to NASA’s commitment to open science.

Jeanne Le Roux↗

NASA NTRS2017

Manned Versus Unmanned Risk and Complexity Considerations for Future Midsized X-Planes

The objective of this work was to identify and estimate complexity and risks associated with the development and testing of new low-cost medium-scale X-plane aircraft primarily focused on air transport operations. Piloting modes that were evaluated for this task were manned, remotely piloted, and unmanned flight research programs. This analysis was conducted early in the data collection period for X-plane concept vehicles before preliminary designs were complete. Over 50 different aircraft and system topics were used to evaluate the three piloting control modes. Expert group evaluations from a diverse set of pilots, engineers, and other experts at Aeronautics Research Mission Directorate centers within the National Aeronautics and Space Administration provided qualitative reasoning on the many issues surrounding the decisions regarding piloting modes. The group evaluations were numerically rated to evaluate each topic quantitatively and were used to provide independent criteria for vehicle complexity and risk. An Edwards Air Force Base instruction document was identified that emerged as a source of the effects found in our qualitative and quantitative data. The study showed that a manned aircraft was the best choice to align with test activities for transport aircraft flight research from a low-complexity and low-risk perspective. The study concluded that a manned aircraft option would minimize the risk and complexity to improve flight-test efficiency and bound the cost of the flight-test portion of the program. Several key findings and discriminators between the three modes are discussed in detail.

quanitive analysis↗

NASA NTRS1976

Failure rate analysis of Goddard Space Flight Center spacecraft performance during orbital life

Space life performance data on 57 Goddard Space Flight Center spacecraft are analyzed from the standpoint of determining an appropriate reliability model and the associated reliability parameters. Data from published NASA reports, which cover the space performance of GSFC spacecraft launched in the 1960-1970 decade, form the basis of the analyses. The results of the analyses show that the time distribution of 449 malfunctions, of which 248 were classified as failures (not necessarily catastrophic), follow a reliability growth pattern that can be described with either the Duane model or a Weibull distribution. The advantages of both mathematical models are used in order to: identify space failure rates, observe chronological trends, and compare failure rates with those experienced during the prelaunch environmental tests of the flight model spacecraft.

Norris, H. P.↗

NASA NTRS1986

A high resolution spatial and temporal multiple Doppler analysis of a microburst and its application to aircraft flight simulation

Multiple Doppler radar data collected during the Joint Airport Weather Studies (JAWS) Project is used to synthesize the three-dimensional wind in the region of a microburst. The particular microburst used in this study is the strongest one to date for which three-dimensional winds have been recovered. As a diagnostic tool, a six-DOF numerical aircraft model having characteristics similar to 727 series aircraft is used to investigate jet transport aircraft response to observed microburst winds during simulated approaches and departures. Simple pilot control laws are used to adjust thrust, pitch, roll, and yaw so as to maintain given approach or departure parameters. Generally, when horizontal wind shear along the approach or departure path is 0.01/s or greater, the model is unable to maintain the desired approach path and suffers a significant reduction in climb performance during a go-around or departure. Although the mean wind shear along a path gives a good qualitative measure of the wind shear threat to a jet transport, different paths with similar mean shears can yield markedly different results, as do the same paths through the microburst at different times. These findings are a direct consequence of the fine temporal and spatial scale of microburst winds. During any given modeled aircraft traverse through the region of highest horizontal shear, time variations in the microburst wind field are shown to have an insignificant effect on the modeled flight path. This is because the traverse period is short (30 s) compared to the lifetime of a microburst (300-600 s).

Elmore, K. L.↗

NASA NTRSDate not supplied

Frequency Domain Quasi-Maximum Likelihood Identification of Low Order Aeroservoelastic Models from Flight-Test Data

Background and Motivation - Low Order Equivalent System (LOES) - From handling qualities analysis - Traditionally simplifying complex control law and plant - More easily understood form - Extend LOES to a complex model due to aeroelasticity - Maximum likelihood (Filter Error) System Identification - Z = H_loes (U + W) + V - There are a lot of parameters - System identification usually simplifies by assuming a value - Output Error and Equation Error - Results in biased estimates of the parameters - We are proposing a new method to solving this problem

Jeffrey Ouellette↗

NASA NTRSDate not supplied

Frequency Domain Quasi Maximum Likelihood Identification of Low Order Aeroservoelastic Models from Flight-Test Data

Background and Motivation - Low Order Equivalent System (LOES) - From handling qualities analysis - Traditionally simplifying complex control law and plant - More easily understood form - Extend LOES to a complex model due to aeroelasticity - Maximum likelihood (Filter Error) System Identification - Z = H_loes (U + W) + V - There are a lot of parameters - Estimate noise parameters - Extra outputs mean extra parameters to estimate - Usually assume noise model to simplify - Output Error and Equation Error - Results in biased estimates of the parameters - Sensing flexible aircraft have many outputs - Quasi maximum likelihood exploits redundancy of outputs

Jeffrey Ouellette↗

NASA NTRS2017

Manned Versus Unmanned Risk and Complexity Considerations for Future Midsized X-Planes

x-planes↗

NASA NTRS2017

Colloid Microthruster Flight Performance Results from Space Technology 7 Disturbance Reduction System

Space Technology 7 Disturbance Reduction System (ST7-DRS) is a NASA technology demonstration payload as part of the ESA LISA Pathfinder (LPF) mission, which launched on December 3, 2015. The ST7-DRS payload includes colloid microthrusters as part of a drag-free dynamic control system (DCS) hosted on an integrated avionics unit (IAU) with spacecraft attitude and test mass position provided by the LPF spacecraft computer and the highly sensitive gravitational reference sensor (GRS) as part of the LISA Technology Package (LTP). The objective of the DRS was to validate two technologies: colloid micro-Newton thrusters (CMNT) to provide low-noise control capability of the spacecraft, and drag-free flight control. The CMNT were developed by Busek Co., Inc., in a partnership with NASA Jet Propulsion Laboratory (JPL), and the DCS algorithms and flight software were developed at NASA Goddard Space Flight Center (GSFC). ST7-DRS demonstrated drag-free operation with 10nmHz level precision spacecraft position control along the primary axis of the LTP using eight CMNTs that provided 5-30 N each with 0.1 N precision. The DCS and CMNTs performed as required and as expected from ground test results, meeting all Level 1 requirements based on on-orbit data and analysis. DRS microthrusters operated for 2400 hours in flight during commissioning activities, a 90-day experiment and the extended mission. This mission represents the first validated demonstration of electrospray thrusters in space, providing precision spacecraft control and drag-free operation in a flight environment with applications to future gravitational wave observatories like LISA.

Ziemer, John↗

NASA NTRS2013

Methods for Retrievals of CO2 Mixing Ratios from JPL Laser Absorption Spectrometer Flights During a Summer 2011 Campaign

The JPL airborne Laser Absorption Spectrometer instrument has been flown several times in the 2007-2011 time frame for the purpose of measuring CO2 mixing ratios in the lower atmosphere. This instrument employs CW laser transmitters and coherent detection receivers in the 2.05- micro m spectral region. The Integrated Path Differential Absorption (IPDA) method is used to retrieve weighted CO2 column mixing ratios. We present key features of the evolving LAS signal processing and data analysis algorithms and the calibration/validation methodology. Results from 2011 flights in various U.S. locations include observed mid-day CO2 drawdown in the Midwest and high spatial resolution plume detection during a leg downwind of the Four Corners power plant in New Mexico.

laser remote sensing↗

NASA NTRS1998

Nimbus/TOMS Science Data Operations Support

1. Participate in and provide analysis of laboratory and in-flight calibration of UV sensors used for space observations of backscattered UV radiation. 2. Provide support to the TOMS Science Operations Center, including generating instrument command lists and analysis of TOMS health and safety data. 3. Develop and maintain software and algorithms designed to capture and process raw spacecraft and instrument data, convert the instrument output into measured radiance and irradiances, and produce scientifically valid products. 4. Process the TOMS data into Level 1, Level 2, and Level 3 data products. 5. Provide analysis of the science data products in support of NASA GSFC Code 916's research.

Childs, Jeff↗

NASA NTRS2017

Feasibility Study for Low Drag Acoustic Liners Final Report

This report documents the design and structural analysis as a final deliverable for the Phase 1 contract activity. Also included is a community noise test plan, which is a key deliverable for Phase 2. Finally, a high-level estimate (Phase 3 deliverable) is provided for the work statement of Phases 2-4, which covers the build of two inlet test articles, planning and execution of a flight test with the test inlets, as well as data analysis and final documentation. The two test inlets will be compared to the production baseline inlet configuration. There is also a plan to test one of the inlets "hardwalled" using speed tape or some other similar tape to block the acoustic perforations.

Riedel, Brian↗

NASA NTRS1982

Comparative analysis of operational forecasts versus actual weather conditions in airline flight planning, volume 2

The impact of more timely and accurate weather data on airline flight planning with the emphasis on fuel savings is studied. This volume of the report discusses the results of Task 2 of the four major tasks included in the study. Task 2 compares various catagories of flight plans and flight tracking data produced by a simulation system developed for the Federal Aviation Administrations by SRI International. (Flight tracking data simulate actual flight tracks of all aircraft operating at a given time and provide for rerouting of flights as necessary to resolve traffic conflicts.) The comparisons of flight plans on the forecast to flight plans on the verifying analysis confirm Task 1 findings that wind speeds are generally underestimated. Comparisons involving flight tracking data indicate that actual fuel burn is always higher than planned, in either direction, and even when the same weather data set is used. Since the flight tracking model output results in more diversions than is known to be the case, it was concluded that there is an error in the flight tracking algorithm.

Keitz, J. F.↗