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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 973 records · Page 54
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

Eigenstate thermalization hypothesis and approximate quantum error correction

The eigenstate thermalization hypothesis (ETH) is a powerful conjecture for understanding how statistical mechanics emerges in a large class of many-body quantum systems. It has also been interpreted in a CFT context, and, in particular, holographic CFTs are expected to satisfy ETH. Recently, it was observed that the ETH condition corresponds to a necessary and sufficient condition for an approximate quantum error correcting code (AQECC), implying the presence of AQECCs in systems satisfying ETH. In this paper, we explore the properties of ETH as an error correcting code and show that there exists an explicit universal recovery channel for the code. Based on the analysis, we discuss a generalization that all chaotic theories contain error correcting codes. We then specialize to AdS/CFT to demonstrate the possibility of total bulk reconstruction in black holes with a well-defined macroscopic geometry. When combined with the existing AdS/CFT error correction story, this shows that black holes are enormously robust against erasure errors.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2011

The role of human cytochrome P4503A4 in biotransformation of tissue-specific derivatives of 7H-dibenzo[c,g]carbazole

The environmental pollutant 7H-dibenzo[c,g]carbazole (DBC) and its derivative, 5,9-dimethylDBC (DiMeDBC), produced significant and dose-dependent levels of micronuclei followed by a substantial increase in the frequency of apoptotic cells in the V79MZh3A4 cell line stably expressing the human cytochrome P450 (hCYP) 3A4. In contrast, neither micronuclei nor apoptosis were found in cells exposed to the sarcomagenic carcinogen, N-methylDBC (N-MeDBC). A slight but significant level of gene mutations and DNA adducts detected in V79MZh3A4 cells treated with N-MeDBC, only at the highest concentration (30 {mu}M), revealed that this sarcomagenic carcinogen was also metabolized by hCYP3A4. Surprisingly, DBC increased the frequency of 6-thioguanine resistant (6-TG{sup r}) mutations only at the highest concentration (30 {mu}M), while DiMeDBC failed to increase the frequency of these mutations. The resistance to 6-thioguanine is caused by the mutations in the hypoxanthine-guanine phosphoribosyltransferase (Hprt) gene. The molecular analysis of the coding region of Hprt gene showed a deletion of the entire exon 8 in DiMeDBC-induced 6-TG{sup r} mutants, while no changes in the nucleotide sequences were identified in 6-TG{sup r} mutants produced by DBC and N-MeDBC. Based on our results, we suggest that hCYP3A4 is involved in the metabolism of DBC and its tissue-specific derivatives. While hCYP3A4 probably plays an important role in biotransformation of the liver carcinogens, DBC and DiMeDBC, it might only have a marginal function in N-MeDBC metabolism. - Highlights: > DBC activation via CYP3A4 resulted in micronuclei, DNA adduct formation and mutations in V79MZh3A4 cells. > The CYP3A4-mediated DiMeDBC activation caused micronuclei followed by apoptosis in V79MZh3A4 cells. > The genotoxic effects produced by N-MeDBC in V79MZh3A4 cells were negligible. > The hCYP3A4 may play an important role in DBC and DiMeDBC metabolism. > The CYP3A4 might only have a marginal function in N-MeDBC metabolism.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2022

Disentangling multiple scattering with deep learning: application to strain mapping from electron diffraction patterns

Abstract A fast, robust pipeline for strain mapping of crystalline materials is important for many technological applications. Scanning electron nanodiffraction allows us to calculate strain maps with high accuracy and spatial resolutions, but this technique is limited when the electron beam undergoes multiple scattering. Deep-learning methods have the potential to invert these complex signals, but require a large number of training examples. We implement a Fourier space, complex-valued deep-neural network, FCU-Net, to invert highly nonlinear electron diffraction patterns into the corresponding quantitative structure factor images. FCU-Net was trained using over 200,000 unique simulated dynamical diffraction patterns from different combinations of crystal structures, orientations, thicknesses, and microscope parameters, which are augmented with experimental artifacts. We evaluated FCU-Net against simulated and experimental datasets, where it substantially outperforms conventional analysis methods. Our code, models, and training library are open-source and may be adapted to different diffraction measurement problems.

36 MATERIALS SCIENCE↗
DOE OSTI2015

IMPACT OF ATMOSPHERIC CHROMATIC EFFECTS ON WEAK LENSING MEASUREMENTS

Current and future imaging surveys will measure cosmic shear with statistical precision that demands a deeper understanding of potential systematic biases in galaxy shape measurements than has been achieved to date. We use analytic and computational techniques to study the impact on shape measurements of two atmospheric chromatic effects for ground-based surveys such as the Dark Energy Survey and the Large Synoptic Survey Telescope (LSST): (1) atmospheric differential chromatic refraction and (2) wavelength dependence of seeing. We investigate the effects of using the point-spread function (PSF) measured with stars to determine the shapes of galaxies that have different spectral energy distributions than the stars. We find that both chromatic effects lead to significant biases in galaxy shape measurements for current and future surveys, if not corrected. Using simulated galaxy images, we find a form of chromatic “model bias” that arises when fitting a galaxy image with a model that has been convolved with a stellar, instead of galactic, PSF. We show that both forms of atmospheric chromatic biases can be predicted (and corrected) with minimal model bias by applying an ordered set of perturbative PSF-level corrections based on machine-learning techniques applied to six-band photometry. Catalog-level corrections do not address the model bias. We conclude that achieving the ultimate precision for weak lensing from current and future ground-based imaging surveys requires a detailed understanding of the wavelength dependence of the PSF from the atmosphere, and from other sources such as optics and sensors. The source code for this analysis is available at https://github.com/DarkEnergyScienceCollaboration/chroma.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2014

The intrinsic B-mode polarisation of the Cosmic Microwave Background

We estimate the B-polarisation induced in the Cosmic Microwave Background by the non-linear evolution of density perturbations. Using the second-order Boltzmann code SONG, our analysis incorporates, for the first time, all physical effects at recombination. We also include novel contributions from the redshift part of the Boltzmann equation and from the bolometric definition of the temperature in the presence of polarisation. The remaining line-of-sight terms (lensing and time-delay) have previously been studied and must be calculated non-perturbatively. The intrinsic B-mode polarisation is present independent of the initial conditions and might contaminate the signal from primordial gravitational waves. We find this contamination to be comparable to a primordial tensor-to-scalar ratio of r ≅ 10{sup −7} at the angular scale ℓ ≅ 100, where the primordial signal peaks, and r ≅ 5 × 10{sup −5} at ℓ ≅ 700, where the intrinsic signal peaks. Therefore, we conclude that the intrinsic B-polarisation from second-order effects is not likely to contaminate future searches of primordial gravitational waves.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Probing New physics with high-redshift quasars: axions and non-standard cosmology

The Hubble diagram of quasars, as candidates to “standardizable” candles, has been used to measure the expansion history of the Universe at late times, up to very high redshifts ( z ~ 7). It has been shown that this history, as inferred from the quasar dataset, deviates at ≳ 3 σ level from the concordance (ΛCDM) cosmology model preferred by the cosmic microwave background (CMB) and other datasets. In this article, we investigate whether new physics beyond ΛCDM (BΛCDM) or beyond the Standard Model (BSM) could make the quasar data consistent with the concordance model. We first show that an effective redshift-dependent relation between the quasar UV and X-ray luminosities, complementing previous phenomenological work in the literature, can potentially remedy the discrepancy. Such a redshift dependence can be realized in a BSM model with axion-photon conversion in the intergalactic medium (IGM), although the preferred parameter space is in tension with various other astrophysical constraints on axions, at a level depending on the specific assumptions made regarding the IGM magnetic field. We briefly discuss a variation of the axion model that could evade these astrophysical constraints. On the other hand, we show that models beyond ΛCDM such as one with a varying dark energy equation of state ( w CDM) or the phenomenological cosmographic model with a polynomial expansion of the luminosity distance, cannot alleviate the tension. The code for our analysis, based on emcee [1] and corner.py [2], is publicly available at github.com/ChenSun-Phys/high_z_candles.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2013

Ground-state and isomeric-state cross sections for 181 Ta( n , 2 n ) 180 Ta between 8 and 15 MeV

Using the activation technique, the cross section for the reaction 181 Ta(n,2n) 180g Ta was measured from 8 to 15 MeV in small energy steps to resolve inconsistencies in the existing database. The 93.4 keV γ ray from the decay of the 180g Ta ground state was recorded with a high-purity germanium (HPGe) detector. The monitor reactions 27 Al(n,α) 24 Na and 197 Au(n,2n) 196 Au were used for neutron fluence determination. The ENDF VII.1 and TENDL 2011 evaluations are in considerable disagreement with the present data, which in turn agree very well with the majority of the existing data in the 14 MeV energy region. Furthermore, a detailed analysis using the code TALYS was performed to describe the present data and to predict the (n,2n) cross section to the isomeric state of 180 Ta.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2022

Harmonic Generation and Inverse Cascade in the z-Pinch Driven, Preseeded Multimode, Magneto-Rayleigh-Taylor Instability

We report the magneto-Rayleigh-Taylor instability (MRTI) plays an essential role in astrophysical systems and in magneto-inertial fusion, where it is known to be an important degradation mechanism of confinement and target performance. In this Letter, we show for the first time experimental evidence of mode mixing and the onset of an inverse-cascade process resulting from the nonlinear coupling of two discrete preseeded axial modes (400- and 550 - μm wavelengths) on an Al liner that is magnetically imploded using the 20-MA, 100-ns rise-time Z Machine at Sandia National Laboratories. Four radiographs captured the temporal evolution of the MRTI. We introduce a novel unfold technique to analyze the experimental radiographs and compare the results to simulations and to a weakly nonlinear model. We find good quantitative agreement with simulations using the radiation magnetohydrodynamics code hydra. Spectral analysis of the MRTI time evolution obtained from the simulations shows evidence of harmonic generation, mode coupling, and the onset of an inverse-cascade process. The experiments provide a benchmark for future work on the MRTI and motivate the development of new analytical theories to better understand this instability.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2024

Demonstration of neutron time-of-flight diffraction with an event-mode imaging detector

Neutron diffraction beamlines have traditionally relied on deploying large detector arrays of 3 He tubes or neutron-sensitive scintillators coupled with photomultipliers to efficiently probe crystallographic and microstructure information of a given material. Given the large upfront cost of custom-made data acquisition systems and the recent scarcity of 3 He, new diffraction beamlines or upgrades to existing ones demand innovative approaches. This paper introduces a novel Timepix3-based event-mode imaging neutron diffraction detector system as well as first results of a silicon powder diffraction measurement made at the HIPPO neutron powder diffractometer at the Los Alamos Neutron Science Center. Notably, these initial measurements were conducted simultaneously with the 3 He array on HIPPO, enabling direct comparison. Data reduction for this type of data was implemented in the MAUD code, enabling Rietveld analysis. Results from the Timepix3-based setup and HIPPO were benchmarked against McStas simulations, showing good agreement for peak resolution. With further development, systems such as the one presented here may substantially reduce the cost of detector systems for new neutron instrumentation as well as for upgrades of existing beamlines.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2024

ORBUMP Pulsed Dipole Magnet Design for Fermilab Booster

Fermilab initiated the accelerator magnet system upgrade project PIP-II for future neutrino experiments. Old ORBUMP pulsed dipoles should be replaced with new stronger magnets occupying the same space as old ones. Four of these magnets connected in series form dogleg type of proton beam orbit. The magnet field and 19 kA current pulse length are close to 1 ms. Old magnet cores were based on a ferrite material. For new magnets, a magnet gap field is above 0.4 T, which completely saturates ferrite material. So, for the magnet core, 0.127 mm thick laminations of low carbon steel with inorganic coating, as the magnet were placed in a vacuum box. There were investigated transient magnet parameters including skin effect in the iron core and in the single-turn copper coil. The integrated field homogeneity was improved by the copper coil shimming. Simulated by OPERA3D power losses were used for the thermal analysis by ANSYS code. The magnet performance is strongly coupled with the power source. The dynamic magnet inductance and resistance were included in the pulsed power source design. Finally, the paper presented the ORBUMP magnet system design.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2019

Extreme Load Computational Fluid Dynamics Analysis and Verification for a Multibody Wave Energy Converter

A wave energy converter (WEC) must be designed to survive the extreme sea states that it will be subject to throughout its lifetime. Although there are many analysis methods and codes available to accomplish this, there are currently several engineering challenges to WEC survival design. Foremost, the computational design approach will typically involve a trade-off between accuracy and computational efficiency. Additionally, most computational fluid dynamics (CFD) codes are not ideally suited to modeling extreme events for WECs with multibody dynamics, power-take-off systems, and mooring systems. Finally, although WEC design standards and CFD guidelines are emerging, with the current immaturity of the WEC industry, they are not yet well established. In this study, loads on a 1:35-scale, moored, multibody WEC are evaluated with CFD. The CFD results are compared with results obtained from a computationally efficient, midfidelity model based on linearized potential flow hydrodynamics. For these model verification comparisons, both operational and survival configurations are considered. The extreme load results obtained, using both codes, indicate that the survival configuration successfully sheds loads during extreme sea states. It is also found that WEC-Sim, when appropriately applied, can provide reasonable load results, at a fraction of the computational expense of CFD. However, for the more extreme sea states, and for higher-order effects not included in the WEC-Sim model, the linear-based results have significant errors in comparison to the CFD-based results, and should be used judiciously.

16 TIDAL AND WAVE POWER↗
DOE OSTI2016

A scintillator-based approach to monitor secondary neutron production during proton therapy

Here, the primary objective of this work is to measure the secondary neutron field produced by an uncollimated proton pencil beam impinging on different tissue-equivalent phantom materials using organic scintillation detectors. Additionally, the Monte Carlo code mcnpx-PoliMi was used to simulate the detector response for comparison to the measured data. Comparison of the measured and simulated data will validate this approach for monitoring secondary neutron dose during proton therapy. Proton beams of 155- and 200-MeV were used to irradiate a variety of phantom materials and secondary particles were detected using organic liquid scintillators. These detectors are sensitive to fast neutrons and gamma rays: pulse shape discrimination was used to classify each detected pulse as either a neutron or a gamma ray. The mcnpx-PoliMi code was used to simulate the secondary neutron field produced during proton irradiation of the same tissue-equivalent phantom materials. As a result, an experiment was performed at the Loma Linda University Medical Center proton therapy research beam line and corresponding models were created using the mcnpx-PoliMi code. The authors’ analysis showed agreement between the simulations and the measurements. The simulated detector response can be used to validate the simulations of neutron and gamma doses on a particular beam line with or without a phantom. In conclusion, the authors have demonstrated a method of monitoring the neutron component of the secondary radiation field produced by therapeutic protons. The method relies on direct detection of secondary neutrons and gamma rays using organic scintillation detectors. These detectors are sensitive over the full range of biologically relevant neutron energies above 0.5 MeV and allow effective discrimination between neutron and photon dose. Because the detector system is portable, the described system could be used in the future to evaluate secondary neutron and gamma doses on various clinical beam lines for commissioning and prospective data collection in pediatric patients treated with proton therapy.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2012

Evaluation of a Genome-Scale In Silico Metabolic Model for Geobacter metallireducens Using Proteomic Data from a Field Biostimulation Experiment

Biomass and shotgun global proteomics data that reflected relative protein abundances from samples collected during the 2008 experiment at the U.S. Department of Energy Integrated Field-Scale Subsurface Research Challenge site in Rifle, Colorado, provided an unprecedented opportunity to validate a genome-scale metabolic model of Geobacter metallireducens and assess its performance with respect to prediction of metal reduction, biomass yield, and growth rate under dynamic field conditions. Reconstructed from annotated genomic sequence, biochemical, and physiological data, the constraint-based in silico model of G. metallireducens relates an annotated genome sequence to the physiological functions with 697 reactions controlled by 747 enzyme-coding genes. Proteomic analysis showed that 180 of the 637 G. metallireducens proteins detected during the 2008 experiment were associated with specific metabolic reactions in the in silico model. When the field-calibrated Fe(III) terminal electron acceptor process reaction in a reactive transport model for the field experiments was replaced with the genome-scale model, the model predicted that the largest metabolic fluxes through the in silico model reactions generally correspond to the highest abundances of proteins that catalyze those reactions. Central metabolism predicted by the model agrees well with protein abundance profiles inferred from proteomic analysis. Model discrepancies with the proteomic data, such as the relatively low fluxes through amino acid transport and metabolism, revealed pathways or flux constraints in the in silico model that could be updated to more accurately predict metabolic processes that occur in the subsurface environment.

Fang, Yilin↗
DOE OSTI2012

High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes

Microbial communities in the termite hindgut are essential for degrading plant material. We present the high-quality draft genome sequence of the Opitutaceae bacterium strain TAV1, the first member of the phylum Verrucomicrobia to be isolated from wood-feeding termites. The genomic analysis reveals genes coding for lignocellulosic degradation and nitrogen fixation.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility

ABSTRACT We report the genome sequences of four Endozoicomonas sp. strains isolated from the octocoral Litophyton maintained long term at an aquarium facility. Our analysis reveals the coding potential for versatile polysaccharide metabolism; Type II, III, IV, and VI secretion systems; and the biosynthesis of novel ribosomally synthesized and post-translationally modified peptides.

Marques, Matilde (ORCID:0000000194430893)↗
DOE OSTI2013

Determination of performance characteristics of scientific applications on IBM Blue Gene/Q

The IBM Blue Gene®/Q platform presents scientists and engineers with a rich set of hardware features such as 16 cores per chip sharing a Level 2 cache, a wide SIMD (single-instruction, multiple-data) unit, a five-dimensional torus network, and hardware support for collective operations. Especially important is the feature related to cores that have four “hardware threads,” which makes it possible to hide latencies and obtain a high fraction of the peak issue rate from each core. All of these hardware resources present unique performance-tuning opportunities on Blue Gene/Q. We provide an overview of several important applications and solvers and study them on Blue Gene/Q using performance counters and Message Passing Interface profiles. We also discuss how Blue Gene/Q tools help us understand the interaction of the application with the hardware and software layers and provide guidance for optimization. Furthermore, on the basis of our analysis, we discuss code improvement strategies targeting Blue Gene/Q. Information about how these algorithms map to the Blue Gene® architecture is expected to have an impact on future system design as we move to the exascale era.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

pnnl/galas

Codebase for analyzing large atomistic simulation results using graph analytics. Analysis of large molecular simulations is difficult due to size and memory constrains in commonly used analysis software. This code was developed to analyze an ~8 million atom polycrystalline Al system under shear, with a particular emphasis on identifying defect structures. This code applies graph theory to reduce the system to components of interest and applies associated algorithms to characterize these components.

Pope, Jenna (Bilbrey)↗
DOE OSTI2016

Fukushima Daiichi Unit 1 ex-vessel prediction: Core melt spreading

Lower head failure and corium-concrete interaction were predicted to occur at Fukushima Daiichi Unit 1 (1F1) by several different system-level code analyses, including MELCOR v2.1 and MAAP5. Although these codes capture a wide range of accident phenomena, they do not contain detailed models for ex-vessel core melt behavior. However, specialized codes exist for analysis of ex-vessel melt spreading (e.g., MELTSPREAD) and long-term debris coolability (e.g., CORQUENCH). On this basis, an analysis has been carried out to further evaluate ex-vessel behavior for 1F1 using MELTSPREAD and CORQUENCH. Best-estimate melt pour conditions predicted by MELCOR v2.1 and MAAP5 were used as input. MELTSPREAD was then used to predict the spatially-dependent melt conditions and extent of spreading during relocation from the vessel. Lastly, this information was then used as input for the long-term debris coolability analysis with CORQUENCH that is reported in a companion paper.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗