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At least 991 records · Page 55

On learning what to learn: Heterogeneous observations of dynamics and establishing possibly causal relations among them

Abstract Before we attempt to (approximately) learn a function between two sets of observables of a physical process, we must first decide what the inputs and outputs of the desired function are going to be. Here we demonstrate two distinct, data-driven ways of first deciding “the right quantities” to relate through such a function, and then proceeding to learn it. This is accomplished by first processing simultaneous heterogeneous data streams (ensembles of time series) from observations of a physical system: records of multiple observation processes of the system. We determine (i) what subsets of observables are common between the observation processes (and therefore observable from each other, relatable through a function); and (ii) what information is unrelated to these common observables, therefore particular to each observation process, and not contributing to the desired function. Any data-driven technique can subsequently be used to learn the input–output relation—from k-nearest neighbors and Geometric Harmonics to Gaussian Processes and Neural Networks. Two particular “twists” of the approach are discussed. The first has to do with the identifiability of particular quantities of interest from the measurements. We now construct mappings from a single set of observations from one process to entire level sets of measurements of the second process, consistent with this single set. The second attempts to relate our framework to a form of causality: if one of the observation processes measures “now,” while the second observation process measures “in the future,” the function to be learned among what is common across observation processes constitutes a dynamical model for the system evolution.

Sroczynski, David W.↗

Optical data processing and projected applications of the ERTS-1 imagery covering the 1973 Mississippi River Valley floods

Flooding was detected along the Mississippi River and some of its tributaries by the multispectral scanner (MSS) on the ERTS-1 on at least three orbits during the spring of 1973. The ERTS data provided the first opportunity for mapping the regional extent of flooding. Special optical data processing techniques were used to produce a variety of multispectral color composites enhancing flood-plain details. One of these, a 2-color composite of near infrared bands 6 and 7, was enlarged and registered to 1:250,000-scale topographic maps and used as the basis for preparation of flood image maps. Two specifically filtered 3-color composites of MSS bands 5,6, and 7 and 4, 5, and 7 were prepared.

Deutsch, M.↗

Restoring Historic Forest Disturbance Frequency Would Partially Mitigate Droughts in the Central Sierra Nevada Mountains

Forest thinning and prescribed fire are expected to improve the climate resilience and water security of forests in the western U.S., but few studies have directly modeled the hydrological effects of multi-decadal landscape-scale forest disturbance. By updating a distributed process-based hydrological model (DHSVM) with vegetation maps from a distributed forest ecosystem model (LANDIS-II), we simulate the water resource impacts of forest management scenarios targeting partial or full restoration of the pre-colonial disturbance return interval in the central Sierra Nevada mountains. In a fully restored disturbance regime that includes fire, thinning, and insect mortality, reservoir inflow increases by 4%–9% total and 8%–14% in dry years. At sub-watershed scales (10–100 km2), thinning dense forests can increase streamflow by >20% in dry years. In a thinner forest, increased understory transpiration compensates for decreased overstory transpiration. Consequentially, 73% of streamflow gains are attributable to decreased overstory rain and snow interception loss. Thinner forests can increase headwater peak flows, but reservoir-scale peak flows are almost exclusively influenced by climate. Uncertainty in future precipitation causes high uncertainty in future water yield, but the additional water yield attributable to forest disturbance is about five times less sensitive to annual precipitation uncertainty. This partial decoupling of the streamflow disturbance response from annual precipitation makes disturbance especially valuable for water supply during dry years. Our study can increase confidence in the water resource benefits of restoring historic forest disturbance frequencies in the central Sierra Nevada mountains, and our modeling framework is widely applicable to other forested mountain landscapes.

Boardman, Eli N. [University of Nevada, Reno, NV (↗

Non-classical ion-indiffusion processes in quasi-one-dimensional ionic conductor KTiOPO4

Developments in coercive field engineering and waveguide writing via ion-exchange in the ferroelectric ionic-conductor KTiOPO4 (KTP) have led to breakthroughs within the field of nonlinear optics and quantum photonics. However, the microscopic diffusion dynamics of ion-exchange in KTP are poorly understood and show signs of non-classical diffusion dynamics. The precise control of ion-exchange gradients is critical for developing KTP into a mature, integrated nonlinear optical material but requires a level of control that, in turn, demands a deeper understanding of the ion-exchange process. We employ direct ToF-SIMS mapping to untangle the complex diffusion dynamics of the commonly used ion-exchange dopant ions: Rb, Ba, and K. We map periodic diffusion gradients of two exchanges, one dominated by Rb-ions and the other by Ba-ions. For the first time, we show the interdependent nature of the Ba- and Rb ion in the ion-exchange diffusion gradient. The low incorporation of the Ba ion is mapped and quantified, and dopant–crystal interactions are identified. This work highlights the complex diffusion dynamics of dopants in the KTP structure and lays the foundation for deterministic control of diffusion gradients for the next generation of integrated nonlinear and quantum photonic devices.

Barrett, Laura [ORNL]↗

Alignment and dissociation of electronically excited molecular hydrogen with intense laser fields

The dissociation of aligned, electronically excited H 2 (E,F 1 Σ g + ), followed by ionization of the produced H atom, is analyzed via the velocity mapped imaging technique. The dissociation and ionization processes are accomplished, respectively, by a two- and a onephoton absorption from a single 532-nm laser pulse, while the alignment is induced by a separate 1064-nm laser pulse. The velocity of the produced H + photofragments shows a weak perpendicular alignment at low alignment laser field values, evolving to strongly parallel for larger fields. We modeled this alignment behavior with a simple two-state model involving the Stark mixing of the initially-prepared J = 0 with the J = 2 rotational state. This model is able to reproduce all of the observed angular distribution, and permits us to extract from the fit the polarizability anisotropy of H 2 (E,F) electronic state. We determine this value to be (3.7 ± 1.2) x 10 3 a.u. As this value is extremely large in comparison to what one would expect from the pure H 2 (E,F) electronic state, we hypothesize that this value comes from the 1064-nm laser beam mixing nearby electronic states with the initially laser prepared (E,F) state generating a mixed state (EF**) with an extremely large polarizability anisotropy.

74 ATOMIC AND MOLECULAR PHYSICS↗

Geometrically necessary dislocation fingerprints of dislocation loop absorption at grain boundaries

Here we present a numerical methodology to compute the Nye-tensor fingerprints of dislocation loop absorption at grain boundaries (GBs) for comparison with TEM observations of irradiated polycrystals. Our approach links atomistic simulations of self-interstitial atom (SIA) prismatic loops gliding toward and interacting with GBs in body-centered cubic iron with experimentally extracted geometrically necessary dislocation (GND) maps to facilitate the interpretation of damage processes. The Nye-tensor analysis is strongly mesh-size dependent—corresponding to resolution-dependent TEM observations. The method computes GND fingerprints from discretized dislocation line segments extracted from molecular dynamics simulations of dislocation loops being absorbed at a GB. Specifically, we perform MD simulation of prismatic loops of two diameters and monitor the three stages of the absorption process: loop glide, the partial, and full absorption of the loops at a [1 0 0] symmetric tilt GB. These methods provide a framework for future investigations of the nature of defect absorption by grain boundaries under irradiation conditions.

36 MATERIALS SCIENCE↗

Comprehensive characterization of extracellular vesicles produced by environmental (Neff) and clinical (T4) strains of Acanthamoeba castellanii

We conducted a comprehensive comparative analysis of extracellular vesicles (EVs) from two Acanthamoeba castellanii strains, Neff (environmental) and T4 (clinical). Morphological analysis via transmission electron microscopy revealed slightly larger Neff EVs (average = 194.5 nm) compared to more polydisperse T4 EVs (average = 168.4 nm). Nanoparticle tracking analysis (NTA) and dynamic light scattering validated these differences. Proteomic analysis of the EVs identified 1,352 proteins, with 1,107 common, 161 exclusive in Neff, and 84 exclusively in T4 EVs. Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) mapping revealed distinct molecular functions and biological processes and notably, the T4 EVs enrichment in serine proteases, aligned with its pathogenicity. Lipidomic analysis revealed a prevalence of unsaturated lipid species in Neff EVs, particularly triacylglycerols, phosphatidylethanolamines (PEs), and phosphatidylserine, while T4 EVs were enriched in diacylglycerols and diacylglyceryl trimethylhomoserine, phosphatidylcholine and less unsaturated PEs, suggesting differences in lipid metabolism and membrane permeability. Metabolomic analysis indicated Neff EVs enrichment in glycerolipid metabolism, glycolysis, and nucleotide synthesis, while T4 EVs, methionine metabolism. Furthermore, RNA-seq of EVs revealed differential transcript between the strains, with Neff EVs enriched in transcripts related to gluconeogenesis and translation, suggesting gene regulation and metabolic shift, while in the T4 EVs transcripts were associated with signal transduction and protein kinase activity, indicating rapid responses to environmental changes. In this novel study, data integration highlighted the differences in enzyme profiles, metabolic processes, and potential origins of EVs in the two strains shedding light on the diversity and complexity of A. castellanii EVs and having implications for understanding host-pathogen interactions and developing targeted interventions for Acanthamoeba-related diseases.

59 BASIC BIOLOGICAL SCIENCES↗

Panel-Segmentation [SWR-21-18]

Panel-Segmentation contains the scripts for automated metadata extraction of solar PV installations, using satellite imagery coupled with computer vision techniques. In this package, the user can perform the following actions: *Automatically generate a satellite image using a set of lat-long coordinates, and a Google Maps API key. Users would need to set up a Google Cloud account and get a Maps Static API key. Please refer to Setting Up Google Maps Static API Key section for this process. *Perform image segmentation on the satellite image, to locate the solar array(s) in the image on a pixel-by-pixel basis, using an image segmentation model (panel_detection_model.pth). Get classification of the installation (rooftop, ground mounted fixed-tilt or tracking, carport, etc). *Perform azimuth estimation on each solar array cluster in the masked image. *Detect solar panels and get its latitude, longitude, and address within a geographic bounding box through the SOL-Searcher Pipeline. *Detect and calculate hurricane damage on solar installations given pre-hurricane and post-hurricane satellite imagery through the Hurricane Detection Pipeline. *Detect and calculate hail damage on solar installations given satellite imagery through the Hail Detection pipeline. *Convert NOAA MESH (Maximum Estimated Size of Hail) grib2 files into kml or geojson files. *Estimate tilt and azimuth of a solar array by processing USGS LiDAR data for the array’s location.

Edun, Ayobami↗

Pseudo-differential representation of the metaplectic transform and its application to fast algorithms

The metaplectic transform (MT), also known as the linear canonical transform, is a unitary integral mapping that is widely used in signal processing and can be viewed as a generalization of the Fourier transform. For a given function $ψ$ on an $N$-dimensional continuous space q , the MT of $ψ$ is parameterized by a rotation (or more generally, a linear symplectic transformation) of the 2$N$-dimensional phase space ( q,p ), where p is the wavevector space dual to q . In this study, we derive a pseudo-differential form of the MT. For small-angle rotations, or near-identity transformations of the phase space, it readily yields asymptotic differential representations of the MT, which are easy to compute numerically. Rotations by larger angles are implemented as successive applications of $K \gg 1$ small-angle MTs. The algorithm complexity scales as $O(KN^3N_p)$ where $N_p$ is the number of grid points. Here, we present a numerical implementation of this algorithm and discuss how to mitigate the associated numerical instabilities.

79 ASTRONOMY AND ASTROPHYSICS↗

Utah FORGE: InSAR Data 2019

This dataset contains Interferometric Synthetic Aperture Radar (InSAR) data used for ground deformation monitoring during Phase 2C of the Utah FORGE project. The dataset includes measurements of the mean rate of range change and associated standard errors, provided in both CSV and NetCDF formats. Supporting materials include histograms, maps, and MATLAB scripts used for data processing, as well as unit vector information describing the satellite's sensor orientation. Compressed archives contain additional metadata and masked range change data for individual interferometric pairs. A README file is included to provide further details on the dataset's structure and contents.

15 GEOTHERMAL ENERGY↗

Real-time kinematic (RTK) Drone-collected Data and Processed Models of Port Arthur Coastal Neighborhood and Pleasure Island Golf Course, June 2024

The Southeast Texas Urban Integrated field lab’s Co-design team captured aerial photos in the Port Arthur Coastal Neighborhood Community and the Golf Course on Pleasure Island, Texas, in June 2024. Aerial photos taken were through autonomous flight, and models were processed through the DroneDeploy engine. All aerial photos are in .JPG format and contained in zipped files for each area. The processed data package includes 3D models, geospatial data, mappings, and point clouds. Please be aware that DTM, Elevation toolbox, Point Cloud, and Orthomosaic use EPSG: 6588. And 3D Model uses EPSG: 3857.For using these data:- The Adobe Suite gives you great software to open .Tif files.- You can use LASUtility (Windows), ESRI ArcGIS Pro (Windows), or Blaze3D (Windows, Linux) to open a LAS file and view the data it contains.- Open an .OBJ file with a large number of free and commercial applications. Some examples include Microsoft 3D Builder, Apple Preview, Blender, and Autodesk.- You may use ArcGIS, Merkaartor, Blender (with the Google Earth Importer plug-in), Global Mapper, and Marble to open .KML files.- The .tfw world file is a text file used to georeference the GeoTIFF raster images, like the orthomosaic and the DSM. You need suitable software like ArcView to open a .TFW file.This dataset provides researchers with sufficient geometric data and the status quo of the land surface at the locations mentioned above. This dataset will support researchers' decision-making processes under uncertainties.

2D mapping↗

Brain Connectomics: Opportunities for High-Performance Computing (Final Report)

The human brain is estimated to contain approximately 100 trillion neural connections. This complex map of connectivity (human connectome) underlies cognitive processes and informs disease states, but until recently, studying the human connectome has been hampered by the difficulty of collecting and processing suitable data for analysis. In this context, an initiative denominated The Human Connectome Project (HCP) was created to acquire and collect the largest, most cohesive set of brain data to accelerate neuroscience research. Recently the HCP released a magnetic resonance (MR) dataset of brain imagery with unprecedented scale and organization, together with high quality spatial and temporal resolution; however, fully taking advantage of this high-resolution brain imagery to estimate neurological connectivity networks requires high-performance computing (HPC). In this project, we explored the feasibility of using HPC resources at Lawrence Livermore to effectively estimate brain connectivity networks from this large set of imagery. Specifically, we addressed one of the main current challenges in brain connectomics, which is to advance the computation of individual structural and functional connectomes.

42 ENGINEERING↗

Deep Learning Based Approach to Integrate MyShake's Trigger Data with ShakeAlert for Faster and Robust EEW Alerts

Earthquake Early Warning (EEW) systems depend on the dense seismic network to make fast and accurate earthquake detections to issue useful early alerts. The recent development and implementation of the ShakeAlert system is relying on the west coast seismic network to detect and estimate the earthquake parameters in real-time. While working on making improvements on the current system, one potential approach is to include more seismic recordings from various sources, such as the low-cost smartphone seismic network, such as the MyShake network, or the Google Android smartphones, since these smartphone seismic networks have much more portable stations (phones) to potentially provide useful data to the system. This report summarizes the initial exploration of using a deep learning approach to combine the data from both traditional seismic stations and the smartphone data in California. Due to the heterogeneity nature of the data, we aggregate data from the phones (using simulation data), as well as that from traditional seismic stations to grid cells. By generating real-time triggering ratio grid cell maps, the designed deep learning algorithm can process the data from multiple sources and detect the earthquake faster than only using that from a traditional seismic network.

58 GEOSCIENCES↗

Using Information Automation and Human Technology Integration to Implement Integrated Operations for Nuclear

The purpose of the research effort described in this report is to develop and demonstrate an approach to the design and implementation of advanced, automated systems intended to increase operational efficiencies at nuclear power plants. In particular, we describe methods for considering human-technology integration (HTI) issues throughout the various phases of system design, test, and implementation and how these considerations help promote effective design. This research project will develop planning tools and comprehensive guidance on how HTI principles and methods, in combination with information automation technologies, can enable effective data integration and coordination for full nuclear plant modernization. Specifically, this research project will develop an approach to automate the mapping of data from plant systems and processes to application needs, thereby significantly reducing the amount of human workload currently required for the execution of these tasks. In addition to developing an automated solution as a replacement for these tasks, this research will also analyze digitalization’s effectiveness in reducing operational costs of compliance related activities. Compliance activities are estimated to account for as much as 50% of operations and maintenance (i.e., non-fuel and non-capital) costs of plant operation.

97 MATHEMATICS AND COMPUTING↗

Stress Relaxation Cracking in 347H Stainless Steel Arc Welds: Susceptibility Evaluation of Heat-Affected Zone

Stress relaxation cracking (SRC) is considered one of the major failure mechanisms for 347H stainless steel welds at elevated service temperatures or during post weld heat treatment (PWHT), especially within the heat-affected zone (HAZ). This work focuses on the characterization of SRC susceptibility within 347H physically simulated arc welded HAZ at elevated temperatures. A four-step SRC thermomechanical test in combination with finite element modeling (FEM) of the welding and testing processes is developed to establish a susceptibility map for HAZ. The test first runs a thermal cycle with three different peak temperatures (1335, 1275, and 1150 °C) to duplicate representative HAZ subzone microstructures, followed by time-to-failure examination under a variety of pre-stress (260–600 MPa) and pre-strain conditions (0.03–0.19) as a function of reheat temperatures between 750 and 1050 °C. With the aid of FEM, SRC susceptibility maps are generated to identify the threshold stress, plastic strain, and creep strain as a function of test temperature. It was found out that HAZ subzone with a lower peak temperature (1150 °C) appears to be slightly less susceptible to SRC than the other two subzones that experienced higher peak temperatures. Generally, time-to-fracture reduces with increasing initially applied stress and strain for all test temperatures. The pre-stress thresholds decrease from about 500 to 330 MPa as the testing temperature increases from 800 to 1050 °C, while the corresponding initial plastic strain thresholds reduces from 0.15 to 0.06. The SRC susceptibility was also evaluated through the Larson–Miller Parameter (LMP) analysis as a function of plastic strain, initial stress and starting stress upon reaching the testing temperature, respectively. The 1050 °C test with a high pre-applied strain (0.1) exhibits an extremely short time to failure (t = 3 s) that lies outside the general trend in LMP analysis. Additionally, it was identified that a plastic strain above 0.07 is identified to significantly reduce the bulk creep strain tolerance to fracture and therefore increases SRC susceptibility. Hardness measurement and fractography analysis indicated that the strain aging of niobium carbonitrides and other potential phases in conjunction with intergranular precipitates contributes to an increase in microhardness and increased intergranular cracking susceptibility.

14 SOLAR ENERGY↗

Robust High-Throughput Phenotyping with Deep Segmentation Enabled by a Web-Based Annotator

The abilities of plant biologists and breeders to characterize the genetic basis of physiological traits are limited by their abilities to obtain quantitative data representing precise details of trait variation, and particularly to collect this data at a high-throughput scale with low cost. Although deep learning methods have demonstrated unprecedented potential to automate plant phenotyping, these methods commonly rely on large training sets that can be time-consuming to generate. Intelligent algorithms have therefore been proposed to enhance the productivity of these annotations and reduce human efforts. We propose a high-throughput phenotyping system which features a Graphical User Interface (GUI) and a novel interactive segmentation algorithm: Semantic-Guided Interactive Object Segmentation (SGIOS). By providing a user-friendly interface and intelligent assistance with annotation, this system offers potential to streamline and accelerate the generation of training sets, reducing the effort required by the user. Our evaluation shows that our proposed SGIOS model requires fewer user inputs compared to the state-of-art models for interactive segmentation. As a case study of the use of the GUI applied for genetic discovery in plants, we present an example of results from a preliminary genome-wide association study (GWAS) of in planta regeneration in Populus trichocarpa (poplar). We further demonstrate that the inclusion of a semantic prior map with SGIOS can accelerate the training process for future GWAS, using a sample of a dataset extracted from a poplar GWAS of in vitro regeneration. The capabilities of our phenotyping system surpass those of unassisted humans to rapidly and precisely phenotype our traits of interest. The scalability of this system enables large-scale phenomic screens that would otherwise be time-prohibitive, thereby providing increased power for GWAS, mutant screens, and other studies relying on large sample sizes to characterize the genetic basis of trait variation. Our user-friendly system can be used by researchers lacking a computational background, thus helping to democratize the use of deep segmentation as a tool for plant phenotyping.

54 ENVIRONMENTAL SCIENCES↗

A Close-up View of the Young Circumbinary Disk HD 142527

We present ALMA observations of the 0.88 millimeter dust continuum and the {sup 13}CO and C{sup 18}O J = 3-2 line emission of the circumbinary disk HD 142527 at a spatial resolution of ∼0.″25. This system is characterized by a large central cavity of roughly 120 au in radius, and asymmetric dust and gas emission. By comparing the observations with theoretical models, we find that the azimuthal variations in gas and dust density reach a contrast of 54 for dust grains and 3.75 for CO molecules, with an extreme gas-to-dust ratio of 1.7 on the dust crescent. We point out that caution is required in interpreting continuum-subtracted maps of the line emission, as this process might result in removing a large fraction of the line emission. Radially, we find that both the gas and dust surface densities can be described by Gaussians, centered at the same disk radius, and with gas profiles wider than those for dust. These results strongly support a scenario in which millimeter dust grains are radially and azimuthally trapped toward the center of a gas pressure bump. Finally, our observations reveal a compact source of continuum and CO emission inside the dust-depleted cavity ∼50 au from the primary star. The kinematics of the CO emission from this region is different from that expected from material in Keplerian rotation around the binary system, and might instead trace a compact disk around a third companion. Higher angular resolution observations are required to investigate the nature of this source.

79 ASTRONOMY AND ASTROPHYSICS↗

The use of ERTS-1 MSS data for mapping strip mines and acid mine drainage in Pennsyvania

Digital processing of ERTS-I MSS data for areas around the west branch of the Susquehanna River permits identification of stripped areas including ones that are not discernible from visual analysis of ERTS imagery. Underflight data and ground-based observations are used for ground-truth and as a basis for designing more refined operators to make sub-classifications of stripped areas, particularly with regard to manifestations of acid mine drainage; because of associated diagnostic effects on vegetation, seasonal changes in classifiction criteria are being documented as repeated, cloud-free ERTS-I coverage of the same area becomes available. Preliminary results indicate that ERTS data can be used to moniter not only the total extent of stripping in given areas but also the effectiveness of reclamation and pollution abatement procedures.

Alexander, S. S.↗