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Earth System science

Recent research has solidified a view of the Earth as a global-scale interactive system with complex chemical, physical, biological and dynamical processes that link the ocean, atmosphere, land (soils, ice, snow) and marine and terrestrial living organisms. These processes both within and between the major parts of the system help determine global and regional climate and control the biogeochemical and hydrologic cycles essential to life. The study of the Earth System requires measurements ranging from the scales of the smallest processes to the global scale. An ambitious satellite observational program, the Earth Observing System (EOS), carried out along with the complementary and ongoing World Climate Research Program (WCRP) and International Geosphere-Biosphere Program (IGBP) represents a major international effort to understand this System and predict its future changes. The complex and intriguing nature of the Earth System is discussed along with a number of closely coupled processes occurring within it. These are: clouds, precipitation and vegetation; ocean circulation, sea-surface temperature and phytoplankton; coupled oceanic and atmospheric circulation (the Southern Oscillation); biological activity, atmospheric chemistry and climate; and biological emissions and the ozone layer.

Prinn, R. G.↗

Measurements of Aerosols, Radiation, and Clouds over the Southern Ocean (MARCUS) Ice Nucleating Particle Measurements Field Campaign Report

Evidence exists that sea-spray-sourced ice nucleating particles (INPs) are organic in origin, resulting from biological and biochemical processes in seawater and the sea surface microlayer, and represent a distinctly different and variable, but oftentimes much less effective, INP population in comparison to long-range transported desert dust (DeMott et al. 2016; McCluskey et al. 2018a). Over the Southern Ocean (SO), far from land sources, these INPs may dominate in the marine boundary layer (McCluskey et al. 2018b). Thereby, marine INPs may affect cloud phase and lifetime in this region where pervasive supercooled and mixed-phase boundary-layer clouds appear underrepresented in climate models. This motivated collection of ice nucleating particle concentration measurements during the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) user facility Measurements of Aerosols, Radiation and Clouds over the Southern Ocean (MARCUS) deployment of the second ARM Mobile Facility (AMF2) on the Aurora Australis vessel from early November, 2017 (Austral spring) to late March, 2018 (Austral fall). During this period, four voyages were made from Hobart, Tasmania to the Australian Antarctic Division bases at Casey, Davis, and Mawson, as well as a final resupply cruise to Macquarie Island, the sight of the related Macquarie Island Cloud and Radiation Experiment (MICRE) campaign. Aerosol filter collections of alternating 24- and 48-hour duration were made during all voyages. These filters were returned frozen for subsequent processing to determine variability in the temperature spectrum of the concentrations of INPs active via the immersion freezing mechanism and to conduct additional analyses to indicate the chemical and biological nature of INPs over the SO. The MARCUS data set provides the first spatial and seasonal picture of INP concentrations over the SO in more than four decades, complementing the full annual cycle of INP data we collected for a point location in MICRE.

Ice nucleation, aerosols, arctic processes, marine↗

Preliminary evaluation of waste processing in a CELSS

Physical/chemical, biological, and hybrid methods can be used in a space environment for processing wastes generated by a Closed Ecological Life Support System (CELSS). Two recycling scenarios are presented. They reflect differing emphases on and responses to the waste system formation rates and their composition, as well as indicate the required products from waste treatment that are needed in a life support system.

Jacquez, Ricardo B.↗

Evaluating the Impact of Ocean Eddies in the Global Marine Carbon Cycle

The ocean plays a crucial role in the Earth’s carbon cycle due to its ability to exchange carbon dioxide (CO2) with the atmosphere, and subsequently store it for long periods of time. Part of this sequestration is due to a mechanism known as the Biological Pump, a process where phytoplankton and autotrophic bacteria convert dissolved CO2 to organic matter via photosynthesis, much of which ends up sinking and can remain in the deep ocean for hundreds or thousands of years. If the strength of the Biological Pump changes due the human-induced increase in atmospheric CO2, it will affect the rate of global warming. Earth System Models (ESMs) are now including ocean biogeochemical processes in order to quantify changes in the global carbon cycle under climate change scenarios by embedding a model that represents ocean chemistry and the dynamics of marine ecosystems within an ocean circulation framework. Due to the increased computational cost of including marine biogeochemistry (BGC), they are typically run with relatively low complexity and coarse horizontal grid resolution. Our project utilizes Institutional Computing power to undertake an ESM simulation using a moderate complexity BGC model (35 constituents) and an increased grid resolution that allows the formation of turbulent mesoscale eddies (30 to 200 km in size) in the ocean. Comparing with low resolution runs will allow us to assess whether standard ESMs are biased in their representation of the carbon cycle due to parameterized effects of sub-grid scale physics.

54 ENVIRONMENTAL SCIENCES↗

SeaWiFS Postlaunch Technical Report Series: AMT-5 Cruise Report - Volume 2

This report documents the scientific activities on board the Royal Research Ship (RRS) James Clark Ross (JCR) during the fifth Atlantic Meridional Transect (AMT-5), 14 September to 17 October 1997. There are three objectives of the AMT Program. The first is to derive an improved understanding of the links between biogeochemical processes, biogenic gas exchange, air-sea interactions, and the effects on, and responses of, oceanic ecosystems to climate change. The second is to investigate the functional roles of biological particles and processes that influence ocean color in ecosystem dynamics. The Program relates directly to algorithm development and the validation of remotely-sensed observations of ocean color. Because the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) instrument achieved operational status during the cruise (on 18 September), AMT-5 was designated the SeaWiFS Atlantic Characterization Experiment (SeaACE) and was the only major research cruise involved in the validation of SeaWiFS data during the first 100 days of operations. The third objective involved the near-real time reporting of in situ light and pigment observations to the SeaWiFS Project, so the performance of the satellite sensor could be determined.

Hooker, Stanford B.↗

A Review of Global Satellite-Derived Snow Products

Snow cover over the Northern Hemisphere plays a crucial role in the Earth's hydrology and surface energy balance, and modulates feedbacks that control variations of global climate. While many of these variations are associated with exchanges of energy and mass between the land surface and the atmosphere, other expected changes are likely to propagate downstream and affect oceanic processes in coastal zones. For example, a large component of the freshwater flux into the Arctic Ocean comes from snow melt. The timing and magnitude of this flux affects biological and thermodynamic processes in the Arctic Ocean, and potentially across the globe through their impact on North Atlantic Deep Water formation. Several recent global remotely sensed products provide information at unprecedented temporal, spatial, and spectral resolutions. In this article we review the theoretical underpinnings and characteristics of three key products. We also demonstrate the seasonal and spatial patterns of agreement and disagreement amongst them, and discuss current and future directions in their application and development. Though there is general agreement amongst these products, there can be disagreement over certain geographic regions and under conditions of ephemeral, patchy and melting snow.

Frei, Allan↗

A Review of Global Satellite-Derived Snow Products

Snow cover over the Northern Hemisphere plays a crucial role in the Earth s hydrology and surface energy balance, and modulates feedbacks that control variations of global climate. While many of these variations are associated with exchanges of energy and mass between the land surface and the atmosphere, other expected changes are likely to propagate downstream and affect oceanic processes in coastal zones. For example, a large component of the freshwater flux into the Arctic Ocean comes from snow melt. The timing and magnitude of this flux affects biological and thermodynamic processes in the Arctic Ocean, and potentially across the globe through their impact on North Atlantic Deep Water formation. Several recent global remotely sensed products provide information at unprecedented temporal, spatial, and spectral resolutions. In this article we review the theoretical underpinnings and characteristics of three key products. We also demonstrate the seasonal and spatial patterns of agreement and disagreement amongst them, and discuss current and future directions in their application and development. Though there is general agreement amongst these products, there can be disagreement over certain geographic regions and under conditions of ephemeral, patchy and melting snow

Frei, Allan↗

A Review of Global Satellite-derived Snow Products

Snow cover over the Northern Hemisphere plays a crucial role in the Earth's hydrology and surface energy balance, and modulates feedbacks that control variations of global climate. While many of these variations are associated with exchanges of energy and mass between the land surface and the atmosphere, other expected changes are likely to propagate downstream and affect oceanic processes in coastal zones. For example, a large component of the freshwater flux into the Arctic Ocean comes from snow melt. The timing and magnitude of this flux affects biological and thermodynamic processes in the Arctic Ocean, and potentially across the globe through their impact on North Atlantic Deep Water formation. Several recent global remotely sensed products provide information at unprecedented temporal, spatial, and spectral resolutions. In this article we review the theoretical underpinnings and characteristics of three key products. We also demonstrate the seasonal and spatial patterns of agreement and disagreement amongst them, and discuss current and future directions in their application and development. Though there is general agreement amongst these products, there can be disagreement over certain geographic regions and under conditions of ephemeral, patchy and melting snow.

Frei, Allan↗

Evaluating the Impact of Ocean Eddies in the Global Marine Carbon Cycle

The ocean plays a crucial role in the Earth’s carbon cycle due to its ability to exchange carbon dioxide (CO 2 ) with the atmosphere, and subsequently store it for long periods of time. Part of this sequestration is due to a mechanism known as the Biological Pump, a process where phytoplankton and autotrophic bacteria convert dissolved CO 2 to organic matter via photosynthesis, much of which ends up sinking and can remain in the deep ocean for hundreds or thousands of years. If the strength of the Biological Pump changes due the human-induced increase in atmospheric CO 2 , it will affect the rate of global warming. Earth System Models (ESMs) are now including ocean biogeochemical processes in order to quantify changes in the global carbon cycle under climate change scenarios by embedding a model that represents ocean chemistry and the dynamics of marine ecosystems within an ocean circulation framework. Due to the increased computational cost of including marine biogeochemistry (BGC), they are typically run with relatively low complexity and coarse horizontal grid resolution. Our project utilizes Institutional Computing power to undertake an ESM simulation using a moderate complexity BGC model (35 constituents) and an increased grid resolution that allows the formation of turbulent mesoscale eddies (30 to 200 km in size) in the ocean. Comparing with low resolution runs will allow us to assess whether standard ESMs are biased in their representation of the carbon cycle due to parameterized effects of sub-grid scale physics.

54 ENVIRONMENTAL SCIENCES↗

ORNL Second Target Station Project: Biological & Environmental Science Workshop

Recent advances in neutron sources and instrumentation have opened up many new opportunities for the application of neutron scattering techniques in the biological and environmental sciences. Neutrons enable studies of the structure and dynamics of biological and environmental samples with a particular sensitivity to light elements, such as hydrogen, which is a key component of biological and environmental samples. Studies using neutrons are complementary to X-rays and have the unique advantage of being non-destructive and highly-penetrating. Oak Ridge National Laboratory’s upcoming Spallation Neutron Source (SNS) Second Target Station (STS) will provide high brightness cold neutron sources that significantly advance the scientific capabilities of neutron scattering instruments. The STS will advance our understanding of biological and environmental processes across spatial and temporal scales. The capabilities will enhance our ability to discover, design, and develop new materials essential for advanced sustainable technologies to address society’s most pressing needs. This report summarizes the discussions and recommendations from a joint workshop held by the STS Project and the Biological and Environmental Systems Science Directorate (BESSD) in June 2022. The purpose of the workshop was to explore science opportunities and capabilities related to biological and environmental systems that could be incorporated into both current and future STS instrument designs, as well as additional instruments at the SNS First Target Station (FTS) and High Flux Isotope Reactor (HFIR). With six breakout sessions, each with two invited plenary speakers from other institutions, the participants discussed a wide range of topics relevant to biological and environmental research. Based on the input from participants, a number of recommendations on instrumentation, sample environments, complementary multi-modal methods, data processing and analysis and sample deuteration are provided in the report. The participants also identified science opportunities that are emerging from the planned instrument capabilities at STS. Selected recommendations and science opportunities are listed in the Executive Summary.

54 ENVIRONMENTAL SCIENCES↗

Molecular Processes Underlying the Structure and Assembly of Thin Films and Nanoparticles at Complex interfaces

Since 1995 we have pursued a number of different studies that are quite diverse in nature but with the common theme of using novel laser based methods to study important processes at buried interfaces. Studies of Corrosion, Passivation on n-GaAs(100)Methanol Photoelectrochemical Cell In these studies we have used picosecond photoluminescence and electrochemical studies to understand the GaAs/methanol interface. In our most extensive set of studies we conducted photo-illumination and XPS experiments to understand the chemistry occurring in the GaAs/methanol photoelectrochemical during photoexcitation. An important distinction between photocorrosion and photoetching of GaAs is elucidated by these studies. The dependence of GaAs photocorrosion on light intensity has been explored to better understand intrinsic differences between the lamplight studies and the picosecond photoluminescence studies. The effect of coating the GaAs with a sulfide layer prior to immersion in the cell has also been explored. This last result has led us to examine n-GaAs as a function of crystallographic orientation after exposure to aqueous Na 2 S containing solutions has been studied as a function of crystallographic orientation of the GaAs surface. The (100) and (110) surfaces are relatively similar, with significant amounts of As-S species present at the interface. The (111)B surface lacks this constituent, but shows significant amounts of metallic As. The XPS results have been correlated with the results of previous photocorrosion and passivation studies conducted in a photoelectrochemical cell. The studies indicate that the metallic As present at (111)B surface contributes strongly to the large surface recombination velocity found there, and to the inability of Na 2 S to passivate the (111)B surface. SAMS Under Water: Water Molecular Structure and Bonding at Hydrophobic Surfaces In these DOE sponsored studies we have been interested in learning the similarities and differences in how water behaves at hydrophobic self-assembled monolayer (SAMS)/water interfaces relative to the organic liquid/water interfaces. Several monolayer films have been examined in these studies using a combination of vibrational sum frequency spectroscopy (VSFS), contact angle measurements and AFM. At the hydrocarbon monolayer/water interface we find that water has a weak bonding interaction with the monolayer film that results in an orientation of water at the terminus of these hydrocarbon chains. The water-film interaction is still present for fluorinated films but it is found to be considerably weaker. Hydration and Surfactant Adsorption at Salt/Water Interfaces This set of studies has examined the molecular characteristics of the CaF 2 /water interface using VSFS. Our first studies detailed the structure and orientation of water molecules adsorbed at this mineral surfaces including studies of the surface in the presence of aqueous solutions of salts. These studies have been followed by a series of static and time-resolved studies of the adsorption of carboxylic acid containing organics at this surface, specifically carboxylic acid surfactants and acetic acid. In the latter we have developed a new method for time resolved studies that involve sequential wavelength tuning and automated control of spatial beam overlap at the target can probe amplitude changes of sum-frequency resonances in widely spaced infrared regions. This offers great advantages for the study of the synchronism of molecular processes at interfaces. This approach is particularly suitable to investigate the synchronization of interfacial processes such as surfactant adsorption at charged mineral surfaces. Macromolecular Assembly at Liquid/Liquid Interfaces Macromolecular assembly at the interface between water and a hydrophobic surface underlies some of the most important biological and environmental processes on the planet. Our work has examined polymer adsorption and assembly of carboxylic acid-containing polyelectrolytes at the carbon tetrachloride–water interface, a model system for an oil–water interface. Using VSFS and interfacial tension techniques, these unique set of studies identify the factors that dictate whether or not polyelectrolytes will adsorb to the oil–water interface and also describe the specifics of the adsorption process that depend upon factors such as polymer size, charge density, hydrophobicity, conformation, and the effect of metal ion electrostatics and bonding. The systems studied include polyelectrolytes polyacrylic acid (PAA) and polymethylacrylic acid (PMA) of different polymer sizes and under different aqueous solution conditions. The studies are the first to show the highly ordered nature of the adsorption of the first monolayer with subsequent monolayers disordered. The second set of studies have examined how peptoid nanosheets assemble at the oil/water interface. Peptoid nanosheets are a recently discovered class of two-dimensional (2D) nanomaterial, which form from the self-assembly of a sequence-specific peptoid polymer at an air-water interface. Nanosheet formation occurs first through the assembly of a peptoid monolayer and subsequent compression into a bilayer structure. In these highly successful studies we have shown that the oil-water interface provides another opportunity for growth of these unique and highly ordered peptoid sheets. The monolayer formed at this interface are found through surface spectroscopic measurements to be highly ordered and electrostatic interactions between the charged moieties, namely carboxylate and ammonium residues, of the peptoid are essential in the ability of these peptoids to form ordered nanosheets at the oil-water interface.

36 MATERIALS SCIENCE↗

The biota as ancient and modern modulator of the earth's atmosphere

The composition of the terrestrial atmosphere is thought to have been markedly modified by surface microbiota and modulated around quantities of gases optimized for growth of these microbiota. Three diagrams illustrating these suppositions are presented. The first shows a probable order of appearance of major metabolic pathways in microbes that interact with sediment and atmosphere. It is based on evolutionary considerations and is devised independently of the fossil record. The second diagram shows the qualitative emissions and removals of atmospheric gases by anaerobic organisms; it approximates those processes thought to have dominated the terrestrial atmosphere in Archean times. The third diagrams gaseous emissions and removals by the major groups of organisms, including oxygen-releasing and -utilizing forms. Biological gas exchange processes thought to have dominated the atmosphere since the Proterozoic are thus represented.

Margulis, L.↗

Combining spectroscopic and isotopic techniques gives a dynamic view of phosphorus cycling in soil

Current understanding of phosphorus (P) cycling in soils can be enhanced by integrating previously discrete findings concerning P speciation, exchange kinetics, and the underlying biological and geochemical processes. Here, we combine sequential extraction with P K-edge X-ray absorption spectroscopy and isotopic methods ( 33 P and 18 O in phosphate) to characterize P cycling on a climatic gradient in Hawaii. We link P pools to P species and estimate the turnover times for commonly considered P pools. Dissolved P turned over in seconds, resin-extractable P in minutes, NaOH-extractable inorganic P in weeks to months, and HCl-extractable P in years to millennia. Furthermore, we show that in arid-zone soils, some primary mineral P remains even after 150 ky of soil development, whereas in humid-zone soils of the same age, all P in all pools has been biologically cycled. The integrative information we provide makes possible a more dynamic, process-oriented conceptual model of P cycling in soils.

54 ENVIRONMENTAL SCIENCES↗

Multiphase Transport in Porous Media: Gas-Liquid Separation Using Capillary Pressure Gradients International Space Station (ISS) Flight Experiment Development

Advances in the understanding of multiphase flow characteristics under variable gravity conditions will ultimately lead to improved and as of yet unknown process designs for advanced space missions. Such novel processes will be of paramount importance to the success of future manned space exploration as we venture into our solar system and beyond. In addition, because of the ubiquitous nature and vital importance of biological and environmental processes involving airwater mixtures, knowledge gained about fundamental interactions and the governing properties of these mixtures will clearly benefit the quality of life here on our home planet. The techniques addressed in the current research involving multiphase transport in porous media and gas-liquid phase separation using capillary pressure gradients are also a logical candidate for a future International Space Station (ISS) flight experiment. Importantly, the novel and potentially very accurate Lattice-Boltzmann (LB) modeling of multiphase transport in porous media developed in this work offers significantly improved predictions of real world fluid physics phenomena, thereby promoting advanced process designs for both space and terrestrial applications.This 3-year research effort has culminated in the design and testing of a zero-g demonstration prototype. Both the hydrophilic (glass) and hydrophobic (Teflon) media Capillary Pressure Gradient (CPG) cartridges prepared during the second years work were evaluated. Results obtained from ground testing at 1-g were compared to those obtained at reduced gravities spanning Martian (13-g), Lunar (16-g) and zero-g. These comparisons clearly demonstrate the relative strength of the CPG phenomena and the efficacy of its application to meet NASAs unique gas-liquid separation (GLS) requirements in non-terrestrial environments.LB modeling software, developed concurrently with the zero-g test effort, was shown to accurately reproduce observed CPG driven gas-liquid separation phenomena. The design and fabrication of a micropost plate-lamina Hele-Shaw (HS) cell was performed which served as a computationally attainable geometric structure facilitating direct comparison between physical phenomena observed in our laboratory and the LB software predictions.

Wheeler, Richard R., Jr.↗

Development of an Autonomous, Dual Chamber Bioreactor for the Growth of 3-Dimensional Epithelial-Stromal Tissues in Microgravity

We are developing a novel, autonomous bioreactor that can provide for the growth and maintenance in microgravity of 3‐D organotypic epithelial‐stromal cultures that require an air‐liquid interface. These complex 3‐D tissue models accurately represent the morphological features, differentiation markers, and growth characteristics observed in normal human epithelial tissues, including the skin, esophagus, lung, breast, pancreas, and colon. However, because of their precise and complex culture requirements, including that of an air‐liquid interface, these 3‐D models have yet to be utilized for life sciences research aboard the International Space Station. The development of a bioreactor for these cultures will provide the capability to perform biological research on the ISS using these realistic, tissue‐like human epithelial‐stromal cell models and will contribute significantly to advances in fundamental space biology research on questions regarding microgravity effects on normal tissue development, aging, cancer, and other disease processes. It will also allow for the study of how combined stressors, such as microgravity with radiation and nutritional deficiencies, affect multiple biological processes and will provide a platform for conducting countermeasure investigations on the ISS without the use of animal models. The technology will be autonomous and consist of a cell culture chamber that provides for air‐liquid, liquid‐liquid, and liquid‐air exchanges within the chambers while maintaining the growth and development of the biological samples. The bioreactor will support multiple tissue types and its modular design will provide for incorporation of add‐on capabilities such as microfluidics drug delivery, media sampling, and in situ biomarker analysis. Preliminary flight testing of the hardware will be conducted on a parabolic platform through NASA's Flight Opportunities Program.

Patel, Zarana S.↗

Creating a Wastewater Technology ‘Toolbox’ for Space Exploration ECLSS

Life Support Systems (LSS) are essential for manned spaceflight; without them, humans would not survive. Upcoming long-duration missions demand robust environmental control LSS (ECLSS) due to their insolation and limited prospect for immediate resupply. As part of LSS, water purification systems will require high reliability, sustainability, and efficiency due to transport mass limitations, because routine water delivery will be very difficult and costly to resupply future habitats. This suggests a highly effective treatment method and reuse of every wastewater source. A variety of wastewater streams are generated by crew, and although not all are currently treated, habitat success will require each stream to be treated and utilized as a ‘resource’ rather than 'waste’. These wastewater streams include human wastewater (urine, feces), food waste (plate waste, inedible plant biomass), humidity condensate, hygiene water (shower, oral, handwash), and laundry. Proven technologies are often relied upon due to long-term operations. For future, longer-term missions, this paradigm must shift to include technologies based on meeting mission requirements rather than sacrificing productivity in lieu of proven existing technology capabilities. Many physical, chemical, and biological water-processing technologies are proven and established for terrestrial applications. Herein, these technologies were collected into a ‘toolbox’ to perform possible functions towards effective water purification steps in reduced gravity. Selection criteria are dependent on approach (physical, chemical, or biological), complexity/components, terrestrial performance, and potential applicability to space life support. Utilization of this ‘toolbox’ approach provides a streamline methodology for technology development and down-selection into future architecture in direct response to the dynamic space life support requirements. Establishing the ‘toolbox’ also provides organized and efficient identification of the most appropriate technologies. From there, the technologies with the largest potential to be configured for mission requirements can be further developed and appropriately assessed. This presentation seeks to provide a comprehensive review of space life support water purification requirements and challenges, as well as to present a ‘toolbox’ methodology of available technologies to aid in the difficult process of selecting appropriate LSS water purification for short and long-term NASA mission architectures.

Luke Roberson↗

The universal ancestor

A genetic annealing model for the universal ancestor of all extant life is presented; the name of the model derives from its resemblance to physical annealing. The scenario pictured starts when "genetic temperatures" were very high, cellular entities (progenotes) were very simple, and information processing systems were inaccurate. Initially, both mutation rate and lateral gene transfer levels were elevated. The latter was pandemic and pervasive to the extent that it, not vertical inheritance, defined the evolutionary dynamic. As increasingly complex and precise biological structures and processes evolved, both the mutation rate and the scope and level of lateral gene transfer, i.e., evolutionary temperature, dropped, and the evolutionary dynamic gradually became that characteristic of modern cells. The various subsystems of the cell "crystallized," i.e., became refractory to lateral gene transfer, at different stages of "cooling," with the translation apparatus probably crystallizing first. Organismal lineages, and so organisms as we know them, did not exist at these early stages. The universal phylogenetic tree, therefore, is not an organismal tree at its base but gradually becomes one as its peripheral branchings emerge. The universal ancestor is not a discrete entity. It is, rather, a diverse community of cells that survives and evolves as a biological unit. This communal ancestor has a physical history but not a genealogical one. Over time, this ancestor refined into a smaller number of increasingly complex cell types with the ancestors of the three primary groupings of organisms arising as a result.

NASA Discipline Exobiology↗

Anthropogenic N Deposition Alters the Composition of Expressed Class II Fungal Peroxidases

Here, we present evidence that ca. 20 years of experimental N deposition altered the composition of lignin-decaying class II peroxidases expressed by forest floor fungi, a response which has occurred concurrently with reductions in plant litter decomposition and a rapid accumulation of soil organic matter. This finding suggests that anthropogenic N deposition has induced changes in the biological mediation of lignin decay, the rate limiting step in plant litter decomposition. Hence, an altered composition of transcripts for a critical gene that is associated with terrestrial C cycling may explain the increased soil C storage under long-term increases in anthropogenic N deposition. IMPORTANCE: Fungal class II peroxidases are enzymes that mediate the rate-limiting step in the decomposition of plant material, which involves the oxidation of lignin and other polyphenols. In field experiments, anthropogenic N deposition has increased soil C storage in forests, a result which could potentially arise from anthropogenic N-induced changes in the composition of class II peroxidases expressed by the fungal community. For this study, we have gained unique insight into how anthropogenic N deposition, a widespread agent of global change, affects the expression of a functional gene encoding an enzyme that plays a critical role in a biologically mediated ecosystem process.

59 BASIC BIOLOGICAL SCIENCES↗