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At least 1,027 records · Page 57

A $n$-vector model for charge transport in molecular semiconductors

We develop a lattice model utilizing coarse-grained molecular sites to study charge transport in molecular semiconducting materials. The model bridges atomistic descriptions and structureless lattice models by mapping molecular structure onto sets of spatial vectors isomorphic with spin vectors in a classical n-vector Heisenberg model. Specifically, this model incorporates molecular topology-dependent orientational and intermolecular coupling preferences, including the direct inclusion of spatially correlated transfer integrals and site energy disorder. This model contains the essential physics required to explicitly simulate the interplay of molecular topology and correlated structural disorder, and their effect on charge transport. As a demonstration of its utility, we apply this model to analyze the effects of long-range orientational correlations, molecular topology, and intermolecular interaction strength on charge motion in bulk molecular semiconductors.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Implications of Model Structure and Detail for Utility Planning. Scenario Case Studies using the Resource Planning Model

We examine how model investment decisions change under different model configurations and assumptions related to renewable capacity credit, the inclusion or exclusion of operating reserves, dispatch period sampling, transmission power flow modeling, renewable spur line costs, and the ability of a planning region to import and export power. For all modeled scenarios, we find that under market conditions where new renewable deployment is predominantly driven by renewable portfolio standards, model representations of wind and solar capacity credit and interactions between balancing areas are most influential in avoiding model investments in excess thermal capacity. We also compare computation time between configurations to evaluate tradeoffs between computational burden and model accuracy. From this analysis, we find that certain advanced dispatch representations (e.g., DC optimal power flow) can have dramatic adverse effects on computation time but can be largely inconsequential to model investment outcomes, at least at the renewable penetration levels modeled. Finally, we find that certain underappreciated aspects of new capacity investment decisions and model representations thereof, such as spur lines for new renewable capacity, can influence model outcomes particularly in the renewable technology and location chosen by the model. Though this analysis is not comprehensive and results are specific to the model region, input assumptions, and optimization-modeling framework employed, the findings are intended to provide a guide for model improvement opportunities.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Nature and origin of fluids in granulite facies metamorphism

The various models for the nature and origin of fluids in granulite facies metamorphism were summarized. Field and petrologic evidence exists for both fluid-absent and fluid-present deep crustal metamorphism. The South Indian granulite province is often cited as a fluid-rich example. The fluids must have been low in H2O and thus high in CO2. Deep crustal and subcrustal sources of CO2 are as yet unproven possibilities. There is much recent discussion of the possible ways in which deep crustal melts and fluids could have interacted in granulite metamorphism. Possible explanations for the characteristically low activity of H2O associated with granulite terranes were discussed. Granulites of the Adirondacks, New York, show evidence for vapor-absent conditions, and thus appear different from those of South India, for which CO2 streaming was proposed. Several features, such as the presence of high-density CO2 fluid inclusions, that may be misleading as evidence for CO2-saturated conditions during metamorphism, were discussed.

Newton, R. C.↗

Modeling Electric Field Influences on Plasmaspheric Refilling

We have a new model of ion transport that we have applied to the problem of plasmaspheric flux tube refilling after a geomagnetic disturbance. This model solves the Fokker-Planck kinetic equation by applying discrete difference numerical schemes to the various operators. Features of the model include a time-varying ionospheric source, self-consistent Coulomb collisions, field-aligned electric field, hot plasma interactions, and ion cyclotron wave heating. We see refilling rates similar to those of earlier observations and models, except when the electric field is included. In this case, the refilling rates can be quite different that previously predicted. Depending on the populations included and the values of relevant parameters, trap zone densities can increase or decrease. In particular, the inclusion of hot populations near the equatorial region (specifically warm pancake distributions and ring current ions) can dramatically alter the refilling rate. Results are compared with observations as well as previous hydrodynamic and kinetic particle model simulations.

Liemohn, M. W.↗

A parts list for fungal cellulosomes revealed by comparative genomics

Here, cellulosomes are large, multiprotein complexes that tether plant biomass-degrading enzymes together for improved hydrolysis. These complexes were first described in anaerobic bacteria, where species-specific dockerin domains mediate the assembly of enzymes onto cohesin motifs interspersed within protein scaffolds. The versatile protein assembly mechanism conferred by the bacterial cohesin–dockerin interaction is now a standard design principle for synthetic biology. For decades, analogous structures have been reported in anaerobic fungi, which are known to assemble by sequence-divergent non-catalytic dockerin domains (NCDDs). However, the components, modular assembly mechanism and functional role of fungal cellulosomes remain unknown. Here, we describe a comprehensive set of proteins critical to fungal cellulosome assembly, including conserved scaffolding proteins unique to the Neocallimastigomycota. High-quality genomes of the anaerobic fungi Anaeromyces robustus , Neocallimastix californiae and Piromyces finnis were assembled with long-read, single-molecule technology. Genomic analysis coupled with proteomic validation revealed an average of 312 NCDD-containing proteins per fungal strain, which were overwhelmingly carbohydrate active enzymes (CAZymes), with 95 large fungal scaffoldins identified across four genera that bind to NCDDs. Fungal dockerin and scaffoldin domains have no similarity to their bacterial counterparts, yet several catalytic domains originated via horizontal gene transfer with gut bacteria. However, the biocatalytic activity of anaerobic fungal cellulosomes is expanded by the inclusion of GH3, GH6 and GH45 enzymes. These findings suggest that the fungal cellulosome is an evolutionarily chimaeric structure—an independently evolved fungal complex that co-opted useful activities from bacterial neighbours within the gut microbiome.

09 BIOMASS FUELS↗

Measurement of the production cross section for charmed baryons in proton–nucleus interactions at 70 GeV

The results of an analysis of data from the SERP-E-184 experiment devoted to studying mechanisms of the production of charmed particles in proton–nucleus interactions at 70 GeV and their decays are presented. The data in question were obtained upon irradiating the SVD-2 active target consisting of carbon, silicon, and lead plates with a beam of 70-GeV protons. A detailed simulation on the basis of the FRITIOF7.02 and GEANT3.21 code packages made it possible to optimize event-selection criteria and to calculate the detection efficiency for Λ{sub c}{sup +} baryons. After selecting a signal from the threebody decay of a Λ{sub c}{sup +} baryon, the inclusive cross section for its production at near-threshold energies, its lifetime, and the parameter of the A dependence of the cross section were found. The Λ{sub c}{sup +} -baryon yields are tabulated along with data from other experiments and theoretical predictions.

74 ATOMIC AND MOLECULAR PHYSICS↗

A general proof of the quantum null energy condition

We prove a conjectured lower bound on ⟨T_ _(x)⟩ $ψ$ in any state $ψ$ of a CFT on Minkowski space, dubbed the Quantum Null Energy Condition (QNEC). The bound is given by the second order shape deformation, in the null direction, of the geometric entanglement entropy of an entangling cut passing through $x$. Our proof involves a combination of the two independent methods that were used recently to prove the weaker Averaged Null Energy Condition (ANEC). In particular the properties of modular Hamiltonians under shape deformations for the state ψ play an important role, as do causality considerations. We study the two point function of a “probe” operator $\mathcal{O}$ in the state $ψ$ and use a lightcone limit to evaluate this correlator. Instead of causality in time we consider causality on modular time for the modular evolved probe operators, which we constrain using Tomita-Takesaki theory as well as certain generalizations pertaining to the theory of modular inclusions. The QNEC follows from very similar considerations to the derivation of the chaos bound and the causality sum rule. We use a kind of defect Operator Product Expansion to apply the replica trick to these modular flow computations, and the displacement operator plays an important role. We argue that the proof extends to more general relativistic QFT with an interacting UV fixed point and also prove a higher spin version of the QNEC. Our approach was inspired by the AdS/CFT proof of the QNEC which follows from properties of the Ryu-Takayanagi (RT) surface near the boundary of AdS, combined with the requirement of entanglement wedge nesting. Our methods were, as such, designed as a precise probe of the RT surface close to the boundary of a putative gravitational/stringy dual of any QFT with an interacting UV fixed point.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

In vivo subcellular localization of Mal de Rio Cuarto virus (MRCV) non-structural proteins in insect cells reveals their putative functions

The in vivo subcellular localization of Mal de Rio Cuarto virus (MRCV, Fijivirus, Reoviridae) non-structural proteins fused to GFP was analyzed by confocal microscopy. P5-1 showed a cytoplasmic vesicular-like distribution that was lost upon deleting its PDZ binding TKF motif, suggesting that P5-1 interacts with cellular PDZ proteins. P5-2 located at the nucleus and its nuclear import was affected by the deletion of its basic C-termini. P7-1 and P7-2 also entered the nucleus and therefore, along with P5-2, could function as regulators of host gene expression. P6 located in the cytoplasm and in perinuclear cloud-like inclusions, was driven to P9-1 viroplasm-like structures and co-localized with P7-2, P10 and {alpha}-tubulin, suggesting its involvement in viroplasm formation and viral intracellular movement. Finally, P9-2 was N-glycosylated and located at the plasma membrane in association with filopodia-like protrusions containing actin, suggesting a possible role in virus cell-to-cell movement and spread.

60 APPLIED LIFE SCIENCES↗

Concentration Dependence of Dopant Electronic Structure in Bottom-up Graphene Nanoribbons

Bottom-up fabrication techniques enable atomically precise integration of dopant atoms into the structure of graphene nanoribbons (GNRs). Such dopants exhibit perfect alignment within GNRs and behave differently from bulk semiconductor dopants. The effect of dopant concentration on the electronic structure of GNRs, however, remains unclear despite its importance in future electronics applications. Here we use scanning tunneling microscopy and first-principles calculations to investigate the electronic structure of bottom-up synthesized N = 7 armchair GNRs featuring varying concentrations of boron dopants. First-principles calculations of freestanding GNRs predict that the inclusion of boron atoms into a GNR backbone should induce two sharp dopant states whose energy splitting varies with dopant concentration. Scanning tunneling spectroscopy experiments, however, reveal two broad dopant states with an energy splitting greater than expected. Here, this anomalous behavior results from an unusual hybridization between the dopant states and the Au(111) surface, with the dopant–surface interaction strength dictated by the dopant orbital symmetry.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Modeling of the magnetosphere-ionosphere-atmosphere system

During the period covered by this report we continued to investigate basic processes in magnetosphere-ionosphere coupling and to develop algorithms for analyzing ultraviolet, visible, and X-ray images that will be acquired on the POLAR spacecraft. An image analysis procedure combines several numerical models to obtain a self-consistent picture of the ionosphere and thermosphere. Our ionosphere-aurora model was extended by the inclusion of the magnetic mirror force and a self-consistent parallel electric field in the ionosphere. The electron transport model which forms a critical part of the aurora model was evaluated by comparison with laboratory measurements and auroral observations. We determined the uncertainties that arise from our limited knowledge of cross sections and energy degradation functions for electron neutral interaction.

Source record↗

Interactions of Hydrazine and Blowby Gases

The interactions between hydrazine and blowby gases from pyrovalves was explored in this research project. Investigating the decomposition chemistry of hydrazine through detailed chemical kinetic modeling is a project started last summer while participating in the Summer Faculty Fellowship program. During the 1999-2000 academic year, the chemical kinetic mechanism for hydrazine decomposition developed while a SFF at NASA's White Sands Test Facility was further revised and validated against the limited experimental data in the literature. This mechanism was then used in assessing the effects of blowby gas species on hydrazine decomposition. The combustion products introduced into the fuel line by pyrovalve actuation consist primarily of hydrogen gas. Hydrogen is also a product of the decomposition of hydrazine. Additional gaseous chemical species are introduced into the fuel, as well as metals and metal salts that deposit onto the walls of the fuel line. The deposition process is undoubtedly very rapid, and exothermic. Therefore, the major focus of this summer's work was examining the effects of hydrogen presence on hydrazine decomposition, with some representative calculations including the remaining gaseous species found to exist in blowby gases. Since hydrogen is a product of hydrazine decomposition, all reactions necessary to evaluate its effect on hydrazine decomposition chemistry were in the original mechanism developed. However, the mechanism needed to be considerably expanded to include the reactions of the other gaseous blowby species with hydrazine, all the intermediate species formed in its decomposition, and each other. The expanded mechanism consists of 70 species interacting via a network of 452 reactions. Calculations with molecular hydrogen introduced into hydrazine gas in an inert bath gas indicate that H2 presence as an initial reactant in substantial amounts can dramatically impact the decomposition process for hydrazine. The other gaseous blowby species (CO, CO2, H2O, CH4, O2, and N2) were found to have little effect compared to the inclusion of hydrogen itself as an initial reagent. This result is undoubtedly due, in part, to the fact that the blowby gas used in these calculations consisted of 94.6% H2. A more rigorous examination of the behavior of the full detailed mechanism under a variety of conditions was not performed.

Meagher, Nancy E.↗

Adsorption of volatile organic compounds in porous metal-organic frameworks functionalized by polyoxometalates

The functionalization of porous metal-organic frameworks (Cu{sub 3}(BTC){sub 2}) was achieved by incorporating Keggin-type polyoxometalates (POMs), and further optimized via alkali metal ion-exchange. In addition to thermal gravimetric analysis, IR, single-crystal X-ray diffraction, and powder X-ray diffraction, the adsorption properties were characterized by N{sub 2} and volatile organic compounds (VOCs) adsorption measurements, including short-chain alcohols (C<4), cyclohexane, benzene, and toluene. The adsorption enthalpies estimated by the modified Clausius-Clapeyron equation provided insight into the impact of POMs and alkali metal cations on the adsorption of VOCs. The introduction of POMs not only improved the stability, but also brought the increase of adsorption capacity by strengthening the interaction with gas molecules. Furthermore, the exchanged alkali metal cations acted as active sites to interact with adsorbates and enhanced the adsorption of VOCs. - Graphical Abstract: The adsorption behavior of volatile organic compounds in porous metal-organic frameworks functionalized by polyoxometalates has been systematically evaluated. Highlights: > Functionalization of MOFs was achieved by incorporating Keggin-type POMs. > Introduction of POMs improved the thermal stability and adsorption capacity. > Alkali metal ion-exchange modified the inclusion state and also enhanced the adsorption. > Adsorption enthalpies were estimated to study the impact of POMs and alkali metal cations.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Magnetic transport apparatus for the production of ultracold atomic gases in the vicinity of a dielectric surface

We present an apparatus designed for studies of atom-surface interactions using quantum degenerate gases of {sup 85}Rb and {sup 87}Rb in the vicinity of a room temperature dielectric surface. The surface to be investigated is a super-polished face of a glass Dove prism mounted in a glass cell under ultra-high vacuum. To maintain excellent optical access to the region surrounding the surface, magnetic transport is used to deliver ultracold atoms from a separate vacuum chamber housing the magneto-optical trap (MOT). We present a detailed description of the vacuum apparatus highlighting the novel design features; a low profile MOT chamber and the inclusion of an obstacle in the transport path. We report the characterization and optimization of the magnetic transport around the obstacle, achieving transport efficiencies of 70% with negligible heating. Finally, we demonstrate the loading of a hybrid optical-magnetic trap with {sup 87}Rb and the creation of Bose-Einstein condensates via forced evaporative cooling close to the dielectric surface.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

On the thermal coarsening and transformation of nanoscale oxide inclusions in 316L stainless steel manufactured by laser powder bed fusion and its influence on impact toughness

The thermal evolution of nanoscale oxide inclusions in 316L stainless steel (SS) manufactured by laser powder bed fusion additive manufacturing (AM) was explored. The size, chemical composition, morphology, and distribution of the oxides were characterized as the function of heat treatment conditions. The study revealed the mechanistic driving force of the rapid oxide coarsening during recrystallization. Ostwald ripening governs oxide coarsening. The active grain boundary-oxide interaction at the early stage of recrystallization accelerated oxide coarsening via enhanced solute diffusion along grain boundaries. Pipe diffusion along dislocation cellular boundaries has a negligible contribution to oxide coarsening. At high temperatures (T> 1065 °C), although lattice diffusion primarily controlled the oxide growth, the contribution from the grain-boundary diffusion was necessary. The transformation from MnSiO 3 to CrMn 2 O 4 took place in the un-recrystallized grains but was not observed when recrystallization started. The interaction of grain boundary and oxides during recrystallization resulted in a high fraction of oxides accumulated at grain boundaries. While oxide coarsening does not significantly alter the toughness value, grain-boundary oxides promote microvoid formation and intergranular fracture under Charpy impact in the recrystallized AM 316L SS.

36 MATERIALS SCIENCE↗

DIII-D's role as a national user facility in enabling the commercialization of fusion energy

The path to fusion in the United States requires partnership between public and private sector. While the private sector provides the vigor to take some of the major steps necessary, there is a depth of expertise and capability in the public sector that is vital to resolving feasible approaches. As an open national user facility, DIII-D provides a crucial testbed to develop the required new technologies and approaches in relevant conditions. It has unparalleled potential to meet this challenge, thanks to its extreme flexibility and world leading diagnostics. This provides a basis to rapidly develop solutions that project to future reactors with confidence. The program has thus been redeveloped to enable public and private sector engagement and testing of new concepts. A new technology program has been launched to resolve plasma interacting technologies. With modest heating upgrades, the facility can confront the crucial “Integrated Tokamak Exhaust and Performance” gap, to resolve core, exhaust and technology solutions together. The device is also being redeveloped as a training facility, with dedicated student run time, a mentorship program, and open access to all opportunity roles, part of wider efforts to diversify and open pathways through inclusion, access, and equity. This exciting agenda is enabling scientists and technology researchers to pioneer the solutions needed for a Fusion Pilot Plant (FPP) and ITER this decade. As a national user facility, DIII D has singular potential to provide the tools, teams, and insight necessary, to do its part in moving the United States rapidly toward the commercialization of fusion energy.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Three-body Faddeev equations in two-particle Alt-Grassberger-Sandhas form with Distorted-Wave-Born-approximation amplitudes as effective potentials

A(d, p)B reactions on heavier nuclei are peripheral at sub-Coulomb energies and can be peripheral even at energies above the Coulomb barrier due to the presence of the distorted waves in the initial and final channels. Usually, to analyze such reactions the distorted-wave-Born-approximation (DWBA) is used. The DWBA amplitude for peripheral reactions is parametrized in terms of the asymptotic normalization coefficient (ANC) of the bound state B = (n A). However, in the DWBA, the coupling of the different channels is not taken into account explicitly. The three-body Faddeev equations written as the two-particle Alt-Grassberger-Sandhas (AGS) equations are very suitable for the analysis of the A(d, p)B reactions because they take into account explicitly the coupling of the different channels. It is well known that the overall normalization of the DWBA amplitude or even of the more advanced continuum-discretized coupled channels (CDCC) amplitude for peripheral reactions (both sub-Coulomb and above the Coulomb barrier) is determined by the ANC. However, it is not apparent that it is the case for the AGS solution due to the coupling of the (d, p) channel to other channels. In this paper, it is proved that the sub-Coulomb A(d, p)B reaction amplitude, which is a solution of the two-body AGS equations, is peripheral and is parametrized in terms of the ANC of the bound state B = (nA) if the corresponding DWBA amplitude is peripheral. Both nonlocal separable and local nuclear interaction potentials between the constituent particles are considered. To prove the peripheral character of the AGS amplitude for the sub-Coulomb A(d, p)B reactions the effective potentials are expressed in terms of the corresponding sub-Coulomb DWBA amplitudes of the different channels. The analysis of the A(d, p)B reactions above the Coulomb barrier requires the inclusion of the optical potentials. Hence, to analyze such reactions, the AGS equations are generalized by including the optical nuclear potentials in the same manner as it is done in the DWBA. The obtained AGS equations contain the DWBA effective potentials with distorted waves generated by the sum of the nuclear optical and the channel Coulomb potentials. It is shown that if the DWBA amplitude is peripheral than it is also the case for the AGS amplitude, which is also parametrized in terms of the ANC of the bound state B = (nA). Furthermore, the inclusion of the coupling of the different channels in the AGS formalism allows one to improve the treatment of the peripheral sub-Coulomb and above the Coulomb (d, p) reactions compared to the DWBA and CDCC method.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Ordering in GaAs co-doped with Bi and N

Introducing only a few atomic percent of Bi or N in GaAs has a large effect on the band gap of the material. Specifically Bi doped GaAs shows potential for local band gap engineering in optoelectronic applications. The incorporation of Bi and N into GaAs is difficult due to strain effects. In this work we study the ordering of these dopants at the atomic scale in order to get a better understanding of the behavior of these dopants in the host lattice. Cross-sectional scanning tunneling microscopy is used to find the exact position of Bi and N dopants in the GaAs matrix, allowing us to study both their nearest neighbor pair occurrences and pair correlation functions. An attractive interaction between Bi dopants at short ranges (1-2 nm) is found and a similar effect is observed between N dopants. Here, we find a repulsive interaction with a similar length scale between Bi and N dopants. A similar repulsion is found in the Bi-N nearest neighbor pairs. Density functional theory is used to calculate the different nearest neighbor pair energies and test these results to the experimental pair occurrences. It is concluded from the experimental and theoretical results that the growth conditions and N inclusion greatly affects the Bi distribution in GaAs.

36 MATERIALS SCIENCE↗

Sensitivity Analysis of Tunable Equation of State Material Model In Pulsed Mercury Target Simulation

A pulsed neutron spallation target is subjected to very short but intense loads from repeated proton pulses. Approximately 60% of the energy from each proton pulse is deposited into the mercury target material and the stainless-steel target structure, leading to a high-pressure region in both the stationary target structure and the flowing mercury. The high-pressure region propagates and leads to fluid-structure interaction. The resultant loading on the target structure containing liquid mercury is difficult to predict, although various simulation approaches and material models for the mercury have been tried. To date, the best match of simulation to experimental data is obtained by using an equation of state (EOS) material model with a specified tensile cutoff pressure, which simulates the cavitation threshold. The inclusion of a threshold to represent cavitation is key to the successful predictions of stress waves triggered by the high-energy pulse striking the mercury and vessel. However, recent measurements of target structure strain show that significant discrepancies remain between the measured and simulated strain values in the EOS mercury model. These differences grow when noncondensable helium gas is intentionally injected into the flowing mercury to reduce the loading on the structure. An EOS-based proportional–integral–derivative (PID) mercury model has been proposed to reduce the gap between the measured and simulated vessel strain responses for targets with gas injection. The conceptual and numerical description and initial investigation of the PID model are presented in previous work. Further studies of this PID model — including the sensitivity of the structure’s strain response to model parameters (the tensile cutoff, PID parameters Kp, Ki, and Kd) — are reported in this article. Results show the strain response is more sensitive to changes in the tensile cutoff value than to changes in the model parameters Kp, Ki, and Kd. These results will aid in future work where the model parameters will be optimized to match simulation data to strain measurements.

Lin, Lianshan↗