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Graph Learning in Physical-informed Mesh-reduced Space for Real-world Dynamic Systems

This Git repository contains codes for the 'Graph Learning in Physical-informed Mesh-reduced Space for Real-world Dynamic Systems' paper that will be published in 2023 SIGKDD. This work uses physical-informed prior (PiP) information to learn and predict fluid dynamics in a reduced mesh space. We propose a two-stage graph-based model for fluid velocity field reconstruction and prediction. In the first stage, we learn a subgraph autoencoder to summarize the information in a mesh-reduced space using physical-informed priors. In the second stage, we learn a dynamics predictor to predict subgraph evolution. We demonstrate the effectiveness of our model on two fluid flow datasets: lid-driven cavity flow data and cylinder flow data. This code is also applicable for any other dynamic systems with corresponding data.

Lei, Bo↗

A Modular Instrumentation System for NASA's Habitat Demonstration Unit

NASA's human spaceflight program is focused on developing technologies to expand the reaches of human exploration and science activities beyond low earth orbit. A critical aspect of living in space or on planetary surfaces is habitation, which provides a safe and comfortable space in which humans can live and work. NASA is seeking out the best option for habitation by exploring several different concepts through the Habitat Demonstration Unit (HDU) project. The purpose of this HDU is to develop a fully autonomous habitation system that enables human exploration of space. One critical feature of the HDU project that helps to accomplish its mission of autonomy is the instrumentation system that monitors key subsystems operating within a Habitat configuration. The following paper will discuss previous instrumentation systems used in analog habitat concepts and how the current instrumentation system being implemented on the HDU1-PEM, or pressurized excursion module, is building upon the lessons learned of those previous systems. Additionally, this paper will discuss the benefits and the limitations of implementing a wireless sensor network (WSN) as the basis for data transport in the instrumentation system. Finally, this paper will address the experiences and lessons learned with integration, testing prior to deployment, and field testing at the JSC rock yard. NASA is developing the HDU1-PEM as a step towards a fully autonomous habitation system that enables human exploration of space. To accomplish this purpose, the HDU project is focusing on development, integration, testing, and evaluation of habitation systems. The HDU will be used as a technology pull, testbed, and integration environment in which to advance NASA's understanding of alternative mission architectures, requirements, and operations concepts definition and validation. This project is a multi-year effort. In 2010, the HDU1-PEM will be in a pressurized excursion module configuration, and in 2011 the module will be reconfigured for a pressurized core module configuration. Each year the HDU configurations will undergo testing at NASA's Desert Research and Technology Studies (D-RaTS) in Arizona [1]. As part of this project, a modular instrumentation system is developed to meet the monitoring needs of the HDU subsystems and to integrate with the current command and data handling infrastructure that has been developed for the project. The main objective of this study is to provide for the monitoring needs of the HDU. The requirements necessary to meet this objective are developed by working with the subsystem managers of the HDU to understand their monitoring needs. Additionally, the instrumentation system design leverages knowledge and lessons learned from previous studies, such as the inflatable habitat health monitoring system that was deployed in Antarctica [2], the integrated health monitoring system developed for NASA's Microhab [3], and the JSC Lunar Habitat Wireless Testbed to demonstrate a "standardsbased" approach to a wireless instrumentation system [4]. The HDU also requires flexibility in reconfiguration options, and it is necessary to demonstrate and evaluate a modular approach to an instrumentation system. Thus, the instrumentation system is designed in two parts: the primary system employs a standard WSN configuration, and the secondary system employs a wired USB hub. The WSN design provides for reconfiguration or replacement of sensors due to malfunctions or upgrades by using a wireless node that accepts ten instrument inputs and wirelessly transmits the data to the command and data handling system. The USB hub is necessary for those instruments that operate using a wired USB connection, although the design attempts to limit the amount of sensors that need to be wired connections.

Rojdev, Kristina↗

Advances in imaging, scattering, spectroscopy, and machine learning-aided approaches for multiscale characterization of cementitious systems

Recent progress in methods used in the multiscale characterization of cementitious systems is reviewed, focusing on advances in imaging, scattering, and spectroscopy. The review includes relevant applications and developments in machine learning and other data analytics approaches to enhance characterization. Developments in imaging using light and electron microscopy as well as x-ray (i.e., from synchrotron) methods are summarized. Updates include scanning electron microscopy (SEM), transmission electron microscopy (TEM), tomography, and holography. A critical overview of spectroscopy (e.g., MAS NMR, Raman) and scattering (e.g., neutron, x-ray, synchrotron x-ray) methods is provided, and the intersection of these with imaging is developed (e.g., Raman imaging). Additionally, the paper summarizes recent developments in and implementations of state-of-the-art machine-learning algorithms and data analytics methods for automated, systematic, and/or quantitative analyses of image data sets. The review considers but is not limited to the application of these methods for investigating the hydration and microstructure development of cement phases, low-carbon-footprint cements (e.g., limestone calcined clay cements, LC3), environmental interactions (e.g., ASR) and model systems. Finally, the present work provides a critical presentation of advances in characterization methods that link together the composition and multiscale structure of cementitious materials.

42 ENGINEERING↗

Evaluation of Technology Concepts for Traffic Data Management and Relevant Audio for Datalink in Commercial Airline Flight Decks

Datalink is currently operational for departure clearances and in oceanic environments and is currently being tested in high altitude domestic enroute airspace. Interaction with even simple datalink clearances may create more workload for flight crews than the voice system they replace if not carefully designed. Datalink may also introduce additional complexity for flight crews with hundreds of uplink messages now defined for use. Finally, flight crews may lose airspace awareness and operationally relevant information that they normally pickup from Air Traffic Control (ATC) voice communications with other aircraft (i.e., “party-line” transmissions). Once again, automation may be poised to increase workload on the flight deck for incremental benefit. Datalink implementation to support future air traffic management concepts needs to be carefully considered, understanding human communication norms and especially, the change from voice- to text-based communications modality and its effect on pilot workload and situation awareness. Increasingly autonomous systems, where autonomy is designed to support human-autonomy teaming, may be suited to solve these issues. NASA is conducting research and development of increasingly autonomous systems, utilizing machine-learning algorithms seamlessly integrated with humans whereby task performance of the combined system is significantly greater than the individual components. Increasingly autonomous systems offer the potential for significantly improved levels of performance and safety that are superior to either human or automation alone. Two increasingly autonomous systems concepts - a traffic data manager and a conversational co-pilot - were developed to intelligently address the datalink issues in a complex, future state environment with significant levels of traffic. The system was tested for suitability of datalink usage for terminal airspace. The traffic data manager allowed for automated declutter of the Automatic Dependent Surveillance-Broadcast (ADS-B) display. The system determined relevant traffic for display based on machine learning algorithms trained by experienced human pilot behaviors. The conversational co-pilot provided relevant audio air traffic control messages based on context and proximity to ownship. Both systems made use of the connected aircraft concepts to provide intelligent context to determine relevancy above and beyond proximity to ownship. A human-in-the-loop test was conducted in NASA Langley Research Center’s Integration Flight Deck B-737-800 simulator to evaluate the traffic data manager and the conversational co-pilot. Twelve airline crews flew various normal and non-normal procedures and their actions and performance were recorded in response to the procedural events. This paper details the flight crew performance and evaluation during the events.

Etherington, Timothy↗

Data exploration systems for databases

Data exploration systems apply machine learning techniques, multivariate statistical methods, information theory, and database theory to databases to identify significant relationships among the data and summarize information. The result of applying data exploration systems should be a better understanding of the structure of the data and a perspective of the data enabling an analyst to form hypotheses for interpreting the data. This paper argues that data exploration systems need a minimum amount of domain knowledge to guide both the statistical strategy and the interpretation of the resulting patterns discovered by these systems.

Greene, Richard J.↗

The Space Infrared Interferometric Telescope (SPIRIT)

SPIRIT, a candidate NASA "Origins Probe," is a spatial and spectral interferometer with an operating wavelength range 25 - 400 microns. SPIRIT will provide sub-arcsecond resolution images and spectra with resolution R = 3000 in a 1 arcmin field of view to accomplish three primary scientific objectives: (1) Learn how planetary systems form from protostellar disks, and how they acquire their chemical organization; (2) Characterize the family of extrasolar planetary systems by imaging the structure in debris disks to understand how and where planets form, and why some planets are ice giants and others are rocky; and (3) Learn how high-redshift galaxies formed and merged to form the present-day population of galaxies. Observations with the space-based SPIRIT will be complementary to those of ground-based submillimeter and millimeter arrays and to JWST. We report results of a recently-completed pre-Phase A mission study.

Leisawitz, David↗

The Space Infrared Interferometric Telescope (SPIRIT): High-resolution Imaging and Spectroscopy in the Far-infrared

We report results of a recently-completed study of SPIRIT, a candidate NASA Origins Probe. SPIRIT is a spatial and spectral interferometer with an operating wavelength range 25 - 400 microns. SPIRIT will provide sub-arcsecond resolution images and spectra with resolution R = 3000 in a 1 arcmin field of view to accomplish three primary scientific objectives: (1) Learn how planetary systems form from protostellar disks, and how they acquire their chemical organization; (2) Characterize the family of extrasolar planetary systems by imaging the structure in debris disks to understand how and where planets form, and why some planets are ice giants and others are rocky; and (3) Learn how high-redshift galaxies formed and merged to form the present-day population of galaxies. Observations with SPIRIT will be complementary to those of the James Webb Space Telescope and the ground-based Atacama Large Millimeter Array. All three observatories could be operational contemporaneously. SPIRIT will pave the way to the 1 km maximum baseline interferometer known as the Submillimeter Probe of the Evolution of Cosmic Structure (SPECS). In addition to the SPIRIT mission concept, this talk will emphasize the importance of dense u-v plane coverage and describe some of the practical considerations associated with alternative interferometric baseline sampling schemes.

Leisawitz, D,↗

Adaptive Stress Testing: Using Reinforcement Learning to Find Failures in Safety-Critical Systems

Emerging applications in artificial intelligence, such as driverless cars and autonomous aircraft promise to be more efficient, cheaper to operate, and always available. However, ensuring the safety of these systems remains a major challenge to their certification and adoption. These autonomous systems are expected to routinely make safety-critical decisions where failures can have serious consequences including loss of life and property. Testing and validation techniques aim to identify and diagnose potential failures before the system is deployed. However, finding failure scenarios in autonomous systems can be very challenging due to high-dimensional and continuous state spaces, interaction with large environments over many time steps, and the rarity of failures. This talk presents Adaptive Stress Testing (AST), a simulation-based testing framework for finding the most likely path to a failure event of a safety-critical system. The key idea of AST is that stress testing can be formulated as a Partially Observable Markov Decision Process (POMDP), which enables reinforcement learning techniques to be used for finding failure events. Reinforcement learning algorithms can efficiently explore the search space and have been shown to scale to very large systems. We present applications of AST to find failures in various safety-critical systems including the aircraft collision avoidance systems, autonomous cars, and small unmanned aerial vehicles.

autonomous vehicles↗

Multifaceted machine learning of competing orders in disordered interacting systems

While the nonperturbative interaction effects in the fractional quantum Hall regime can be readily simulated through exact diagonalization, it has been challenging to establish a suitable diagnostic that can label different phases in the presence of competing interactions and disorder. Here we introduce a multifaceted framework using a simple artificial neural network (ANN) to detect defining features of a fractional quantum Hall state, a charge-density-wave state and a localized state using the entanglement spectra and charge density as independent input. We consider the competing effects of a perturbing interaction (l = 1 pseudopotential ΔV 1 ) , a disorder potential W, and the Coulomb interaction to the system at filling fraction ν = 1/3. In this work, our phase diagram benchmarks well against previous estimates of the phase boundary along the axes of our phase diagram where other measures exist. Moreover, exploring the entire two-dimensional phase diagram, we establish the robustness of the fractional quantum Hall state and map out the charge-density-wave microemulsion phase wherein droplets of the charge-density-wave region appear before the charge density wave is completely disordered. Hence we establish that the ANN can access and learn the defining traits of topological as well as broken symmetry phases using multifaceted inputs of entanglement spectra and charge density.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

On-the-fly closed-loop materials discovery via Bayesian active learning

Active learning—the field of machine learning (ML) dedicated to optimal experiment design—has played a part in science as far back as the 18th century when Laplace used it to guide his discovery of celestial mechanics. In this work, we focus a closed-loop, active learning-driven autonomous system on another major challenge, the discovery of advanced materials against the exceedingly complex synthesis-processes-structure-property landscape. We demonstrate an autonomous materials discovery methodology for functional inorganic compounds which allow scientists to fail smarter, learn faster, and spend less resources in their studies, while simultaneously improving trust in scientific results and machine learning tools. This robot science enables science-over-the-network, reducing the economic impact of scientists being physically separated from their labs. The real-time closed-loop, autonomous system for materials exploration and optimization (CAMEO) is implemented at the synchrotron beamline to accelerate the interconnected tasks of phase mapping and property optimization, with each cycle taking seconds to minutes. We also demonstrate an embodiment of human-machine interaction, where human-in-the-loop is called to play a contributing role within each cycle. This work has resulted in the discovery of a novel epitaxial nanocomposite phase-change memory material.

36 MATERIALS SCIENCE↗

Enhancement of microbiome management by machine learning for biological wastewater treatment

Here we propose to develop microbiome-based machine learning models to predict the response of biological wastewater treatment systems to environmental or operational disturbances or to design specific microbiomes to achieve a desired system function. These machine learning models can be used to enhance the stability of microbiome-based biological systems and warn against the failure of these systems.

59 BASIC BIOLOGICAL SCIENCES↗

Using feature importance as an exploratory data analysis tool on Earth system models

Abstract. Machine learning (ML) models are commonly used to generate predictions, but these models can also support the discovery of new science. Generating accurate predictions necessitates that a model captures the structure of the underlying data. If the structure is properly extracted, ML could be a useful exploratory and evidential tool. In this paper, we present a case study that demonstrates the use of ML for exploratory data analysis (EDA) in the climate space. We apply the ML explainability method of spatiotemporal zeroed feature importance (stZFI) to understand how climate-variable associations evolve over space and time. Our analyses focus on data from ensembles of Earth system models (ESMs) which provide data on different climate states and conditions. We elect to work with ESM ensembles since they allow us to compare feature importance across alternative scenarios not available with observed data. The ensembles also account for natural variability so that we can distinguish between signal and noise due to natural climate variability when computing feature importance. The use of perturbed initial condition ensembles introduces variability mimicking the natural variability in the atmosphere; thus the signals emerging using feature importance (FI) can be evaluated against the natural variability in the climate system. For our analyses, we consider the 1991 volcanic eruption of Mount Pinatubo, which was a large stratospheric aerosol injection. We explore the climate pathway associated with the eruption from aerosols to radiation to temperature at both the near-surface and stratospheric levels. In addition to applying the method to data generated from two different ESMs, we apply stZFI to reanalysis data to compare the associations identified by stZFI. We show how stZFI tracks the importance of aerosol optical depth over time on forecasting temperatures. This case study illustrates usefulness of an ML tool (stZFI) for EDA on a well-studied climate exemplar.

Ries, Daniel (ORCID:0000000250294647)↗

Learning dominance relations in combinatorial search problems

Dominance relations commonly are used to prune unnecessary nodes in search graphs, but they are problem-dependent and cannot be derived by a general procedure. The authors identify machine learning of dominance relations and the applicable learning mechanisms. A study of learning dominance relations using learning by experimentation is described. This system has been able to learn dominance relations for the 0/1-knapsack problem, an inventory problem, the reliability-by-replication problem, the two-machine flow shop problem, a number of single-machine scheduling problems, and a two-machine scheduling problem. It is considered that the same methodology can be extended to learn dominance relations in general.

Yu, Chee-Fen↗

Description of Selected Algorithms and Implementation Details of a Concept-Demonstration Aircraft VOrtex Spacing System (AVOSS)

A ground-based system has been developed to demonstrate the feasibility of automating the process of collecting relevant weather data, predicting wake vortex behavior from a data base of aircraft, prescribing safe wake vortex spacing criteria, estimating system benefit, and comparing predicted and observed wake vortex behavior. This report describes many of the system algorithms, features, limitations, and lessons learned, as well as suggested system improvements. The system has demonstrated concept feasibility and the potential for airport benefit. Significant opportunities exist however for improved system robustness and optimization. A condensed version of the development lab book is provided along with samples of key input and output file types. This report is intended to document the technical development process and system architecture, and to augment archived internal documents that provide detailed descriptions of software and file formats.

Hinton, David A.↗

DeepONet-Assisted Optimization of Surface Topography for Transition Delay in a Mach 4.5 Boundary Layer

We use deep learning, an ensemble variational technique (EnVar), and direct numerical simulations(DNS) to design an optimal topography for a two-dimensional roughness element that delays the on-set of laminar-turbulent transition in a Mach 4.5 flat-plate boundary layer. Deep operator networks (DeepONets), which have the known ability to learn complex nonlinear operators within dynamical systems, are used for machine learning. For the baseline configuration of a smooth flat plate, the second-mode waves at the DNS inflow cause a quick nonlinear breakdown of the high-speed boundary layer within the computational domain. Results reported in the present study validate the ability of DeepONets to model the transition delay via a given topography of the roughness element. The computing cost to optimize the rough-ness element for minimal skin-friction drag is substantially lowered by the DeepONets-based reduced-order model. In comparison to the baseline method of EnVar optimization based on DNS alone, the DeepONets-based EnVar optimizer is able to delay transition past the outflow boundary of the computational domain while utilizing almost 5–6 times fewer DNS.

Machine Learning↗

A Transductive Graph Neural Network learning for Grid Resilience Analysis

Power grids are critical infrastructures that require robust resilience analysis to ensure reliable and uninterrupted electricity supply. Traditional simulation-based methods for grid resilience analysis suffer from computational complexity and limited ability to capture the full spectrum of potential disruptions. This paper presents a novel approach to enhance grid resilience by leveraging transductive graph neural network (GNN) learning to identify critical nodes and links. By leveraging the graph structure and system features, GNNs effectively learn resilience metrics and accurately identify critical nodes based on actual grid operational behavior. The efficacy of the proposed approach is demonstrated through case studies on node criticality scoring and critical node/line identification in cascading outage scenarios. The results highlight the advantages of learning-based methods over traditional simulation-based approaches and their potential to revolutionize grid resilience analysis. The contributions of this paper include a graph-based scalable approach for fast cascading analysis, an inductive formulation for training GNN models, and a transfer learning-based approach to scale the model to largescale power systems.

grid resilience, graph neural networks, transducti↗

Machine Learning Approaches to Increasing Value of Spaceflight Omics Databases

The number of spaceflight bioscience mission opportunities is too small to allow all relevant biological and environmental parameters to be experimentally identified. Simulated spaceflight experiments in ground-based facilities (GBFs), such as clinostats, are each suitable only for particular investigations -- a rotating-wall vessel may be 'simulated microgravity' for cell differentiation (hours), but not DNA repair (seconds) -- and introduce confounding stimuli, such as motor vibration and fluid shear effects. This uncertainty over which biological mechanisms respond to a given form of simulated space radiation or gravity, as well as its side effects, limits our ability to baseline spaceflight data and validate mission science. Machine learning techniques autonomously identify relevant and interdependent factors in a data set given the set of desired metrics to be evaluated: to automatically identify related studies, compare data from related studies, or determine linkages between types of data in the same study. System-of-systems (SoS) machine learning models have the ability to deal with both sparse and heterogeneous data, such as that provided by the small and diverse number of space biosciences flight missions; however, they require appropriate user-defined metrics for any given data set. Although machine learning in bioinformatics is rapidly expanding, the need to combine spaceflight/GBF mission parameters with omics data is unique. This work characterizes the basic requirements for implementing the SoS approach through the System Map (SM) technique, a composite of a dynamic Bayesian network and Gaussian mixture model, in real-world repositories such as the GeneLab Data System and Life Sciences Data Archive. The three primary steps are metadata management for experimental description using open-source ontologies, defining similarity and consistency metrics, and generating testing and validation data sets. Such approaches to spaceflight and GBF omics data may soon enable unique insight into which measured phenomena correlate to biological mechanisms that are truly affected by spaceflight conditions; which are most likely to be confounded by other variables; and which are insufficiently characterized, significantly increasing existing and future science return from ISS and spaceflight missions.

Gentry, Diana↗

KARL: A Knowledge-Assisted Retrieval Language

Data classification and storage are tasks typically performed by application specialists. In contrast, information users are primarily non-computer specialists who use information in their decision-making and other activities. Interaction efficiency between such users and the computer is often reduced by machine requirements and resulting user reluctance to use the system. This thesis examines the problems associated with information retrieval for non-computer specialist users, and proposes a method for communicating in restricted English that uses knowledge of the entities involved, relationships between entities, and basic English language syntax and semantics to translate the user requests into formal queries. The proposed method includes an intelligent dictionary, syntax and semantic verifiers, and a formal query generator. In addition, the proposed system has a learning capability that can improve portability and performance. With the increasing demand for efficient human-machine communication, the significance of this thesis becomes apparent. As human resources become more valuable, software systems that will assist in improving the human-machine interface will be needed and research addressing new solutions will be of utmost importance. This thesis presents an initial design and implementation as a foundation for further research and development into the emerging field of natural language database query systems.

Dominick, Wayne D.↗