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At least 1,063 records · Page 59

Effect of causality constraints on Bayesian analyses of heavy-ion collisions

There have long been questions about the limits to the validity of relativistic fluid dynamics and whether it is being used outside its regime of validity in modern simulations of relativistic heavy-ion collisions. An important new tool for answering this question is a causality analysis in the nonlinear regime—if the solutions of the evolution equations do not respect relativistic causality, then they are not a faithful representation of the underlying relativistic theory (in this case, quantum chromodynamics). Using this nonlinear criterion, it has recently been shown that hydrodynamics is indeed being used outside its regime of validity in simulations, at least sometimes. Here we explore the phenomenological implications, particularly the quantitative effects of demanding limits on acausality in modern Bayesian parameter estimation. We find that, while typically only a small fraction of the system's energy is initially in an acausal regime, placing strict limits on the allowed energy fraction significantly changes the preferred properties of the initial condition, which in turn alters the extracted medium properties such as bulk viscosity, where large values are no longer favored. Furthermore, these findings highlight the importance of developing better theoretical descriptions of the early-time, out-of-equilibrium dynamics of relativistic heavy-ion collisions.

Bayesian methods↗

The statistical analysis of circadian phase and amplitude in constant-routine core-temperature data

Accurate estimation of the phases and amplitude of the endogenous circadian pacemaker from constant-routine core-temperature series is crucial for making inferences about the properties of the human biological clock from data collected under this protocol. This paper presents a set of statistical methods based on a harmonic-regression-plus-correlated-noise model for estimating the phases and the amplitude of the endogenous circadian pacemaker from constant-routine core-temperature data. The methods include a Bayesian Monte Carlo procedure for computing the uncertainty in these circadian functions. We illustrate the techniques with a detailed study of a single subject's core-temperature series and describe their relationship to other statistical methods for circadian data analysis. In our laboratory, these methods have been successfully used to analyze more than 300 constant routines and provide a highly reliable means of extracting phase and amplitude information from core-temperature data.

NASA Discipline Regulatory Physiology↗

Reducing Contingency through Sampling at the Luckey FUSRAP Site - 13186

Typically, the greatest risk in developing accurate cost estimates for the remediation of hazardous, toxic, and radioactive waste sites is the uncertainty in the estimated volume of contaminated media requiring remediation. Efforts to address this risk in the remediation cost estimate can result in large cost contingencies that are often considered unacceptable when budgeting for site cleanups. Such was the case for the Luckey Formerly Utilized Sites Remedial Action Program (FUSRAP) site near Luckey, Ohio, which had significant uncertainty surrounding the estimated volume of site soils contaminated with radium, uranium, thorium, beryllium, and lead. Funding provided by the American Recovery and Reinvestment Act (ARRA) allowed the U.S. Army Corps of Engineers (USACE) to conduct additional environmental sampling and analysis at the Luckey Site between November 2009 and April 2010, with the objective to further delineate the horizontal and vertical extent of contaminated soils in order to reduce the uncertainty in the soil volume estimate. Investigative work included radiological, geophysical, and topographic field surveys, subsurface borings, and soil sampling. Results from the investigative sampling were used in conjunction with Argonne National Laboratory's Bayesian Approaches for Adaptive Spatial Sampling (BAASS) software to update the contaminated soil volume estimate for the site. This updated volume estimate was then used to update the project cost-to-complete estimate using the USACE Cost and Schedule Risk Analysis process, which develops cost contingencies based on project risks. An investment of $1.1 M of ARRA funds for additional investigative work resulted in a reduction of 135,000 in-situ cubic meters (177,000 in-situ cubic yards) in the estimated base volume estimate. This refinement of the estimated soil volume resulted in a $64.3 M reduction in the estimated project cost-to-complete, through a reduction in the uncertainty in the contaminated soil volume estimate and the associated contingency costs. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

The dark matter halo masses of elliptical galaxies as a function of observationally robust quantities

Context. The assembly history of the stellar component of a massive elliptical galaxy is closely related to that of its dark matter halo. Measuring how the properties of galaxies correlate with their halo mass can therefore help to understand their evolution. Aims. We investigate how the dark matter halo mass of elliptical galaxies varies as a function of their properties, using weak gravitational lensing observations. To minimise the chances of biases, we focus on the following galaxy properties that can be determined robustly: the surface brightness profile and the colour. Methods. We selected 2409 central massive elliptical galaxies (log M*/M ⊙ ≳ 11.4) from the Sloan Digital Sky Survey spectroscopic sample. We first measured their surface brightness profile and colours by fitting Sérsic models to photometric data from the Kilo-Degree Survey (KiDS). We fitted their halo mass distribution as a function of redshift, rest-frame r-band luminosity, half-light radius, and rest-frame u - g colour, using KiDS weak lensing measurements and a Bayesian hierarchical approach. For the sake of robustness with respect to assumptions on the large-radii behaviour of the surface brightness, we repeated the analysis replacing the total luminosity and half-light radius with the luminosity within a 10 kpc aperture, L r, 10 , and the light-weighted surface brightness slope, Γ 10 . Results. We did not detect any correlation between the halo mass and either the half-light radius or colour at fixed redshift and luminosity. Using the robust surface brightness parameterisation, we found that the halo mass correlates weakly with L r,10 and anti-correlates with Γ 10 . At fixed redshift, L r, 10 and Γ 10 , the difference in the average halo mass between galaxies at the 84th percentile and 16th percentile of the colour distribution is 0.00 ± 0.11 dex. Conclusion. Our results indicate that the average star formation efficiency of massive elliptical galaxies has little dependence on their final size or colour. This suggests that the origin of the diversity in the size and colour distribution of these objects lies with properties other than the halo mass.

79 ASTRONOMY AND ASTROPHYSICS↗

Functional Data Analysis for Extracting the Intrinsic Dimensionality of Spectra: Application to Chemical Homogeneity in the Open Cluster M67

High-resolution spectroscopic surveys of the Milky Way have entered the Big Data regime and have opened avenues for solving outstanding questions in Galactic archeology. However, exploiting their full potential is limited by complex systematics, whose characterization has not received much attention in modern spectroscopic analyses. In this work, we present a novel method to disentangle the component of spectral data space intrinsic to the stars from that due to systematics. Using functional principal component analysis on a sample of 18,933 giant spectra from APOGEE, we find that the intrinsic structure above the level of observational uncertainties requires ≈10 functional principal components (FPCs). Our FPCs can reduce the dimensionality of spectra, remove systematics, and impute masked wavelengths, thereby enabling accurate studies of stellar populations. To demonstrate the applicability of our FPCs, we use them to infer stellar parameters and abundances of 28 giants in the open cluster M67. We employ Sequential Neural Likelihood, a simulation-based Bayesian inference method that learns likelihood functions using neural density estimators, to incorporate non-Gaussian effects in spectral likelihoods. By hierarchically combining the inferred abundances, we limit the spread of the following elements in M67: Fe ≲ 0.02 dex; C ≲ 0.03 dex; O, Mg, Si, Ni ≲ 0.04 dex; Ca ≲ 0.05 dex; N, Al ≲ 0.07 dex (at 68% confidence). Our constraints suggest a lack of self-pollution by core-collapse supernovae in M67, which has promising implications for the future of chemical tagging to understand the star formation history and dynamical evolution of the Milky Way.

79 ASTRONOMY AND ASTROPHYSICS↗

Ensemble variational Fokker-Planck methods for data assimilation

Particle flow filters solve Bayesian inference problems by smoothly transforming a set of particles into samples from the posterior distribution. Particles move in state space under the flow of an McKean-Vlasov-Itˆo process. This work introduces the Variational Fokker-Planck (VFP) framework for data assimilation, a general approach that includes previously known particle flow filters as special cases. The McKean-Vlasov-Itˆo process that transforms particles is defined via an optimal drift that depends on the selected diffusion term. It is established that the underlying probability density - sampled by the ensemble of particles - converges to the Bayesian posterior probability density. For a finite number of particles the optimal drift contains a regularization term that nudges particles toward becoming independent random variables. Based on this analysis, we derive computationally-feasible approximate regularization approaches that penalize the mutual information between pairs of particles, and avoid particle collapse. Moreover, the diffusion plays a role akin to a particle rejuvenation approach that aims to alleviate particle collapse. The VFP framework is very flexible. Different assumptions on prior and intermediate probability distributions can be used to implement the optimal drift, and localization and covariance shrinkage can be applied to alleviate the curse of dimensionality. A robust implicit-explicit method is discussed for the efficient integration of stiff McKean- Vlasov-Itˆo processes. Here, the effectiveness of the VFP framework is demonstrated on three progressively more challenging test problems, namely the Lorenz ’63, Lorenz ’96 and the quasi-geostrophic equations.

97 MATHEMATICS AND COMPUTING↗

The Radius of PSR J0740+6620 from NICER with NICER Background Estimates

We report a revised analysis for the radius, mass, and hot surface regions of the massive millisecond pulsar PSR J0740+6620, studied previously with joint fits to NICER and XMM-Newton data by Riley et al. (2021) and Miller et al. (2021). We perform a similar Bayesian estimation for the pulse-profile model parameters, except that instead of fitting simultaneously the XMM-Newton data, we use the best available NICER background estimates to constrain the number of photons detected from the source. This approach eliminates any potential issues in the cross-calibration between these two instruments, providing thus an independent check of the robustness of the analysis. The obtained neutron star parameter constraints are compatible with the already published results, with a slight dependence on how conservative the imposed background limits are. A tighter lower limit causes the inferred radius to increase, and a tighter upper limit causes it to decrease. We also extend the study of the inferred emission geometry to examine the degree of deviation from antipodality of the hot regions. We show that there is a significant offset to an antipodal spot configuration, mainly due to the non-half-cycle azimuthal separation of the two emitting spots. The offset angle from the antipode is inferred to be above 25° with 84% probability. This seems to exclude a centered-dipolar magnetic field in PSR J0740+6620.

79 ASTRONOMY AND ASTROPHYSICS↗

A Deep Generative Deconvolutional Image Model

A deep generative model is developed for representation and analysis of images, based on a hierarchical convolutional dictionary-learning framework. Stochastic unpooling is employed to link consecutive layers in the model, yielding top-down image generation. A Bayesian support vector machine is linked to the top-layer features, yielding max-margin discrimination. Deep deconvolutional inference is employed when testing, to infer the latent features, and the top-layer features are connected with the max-margin classifier for discrimination tasks. The model is efficiently trained using a Monte Carlo expectation-maximization (MCEM) algorithm; the algorithm is implemented on graphical processor units (GPU) to enable large-scale learning, and fast testing. Excellent results are obtained on several benchmark datasets, including ImageNet, demonstrating that the proposed model achieves results that are highly competitive with similarly sized convolutional neural networks.

convolutional neural network↗

Bayesian Calibration of Stochastic Agent Based Model via Random Forest

Agent-based models (ABM) provide an excellent framework for modeling outbreaks and interventions in epidemiology by explicitly accounting for diverse individual interactions and environments. However, these models are usually stochastic and highly parametrized, requiring precise calibration for predictive performance. When considering realistic numbers of agents and properly accounting for stochasticity, this high-dimensional calibration can be computationally prohibitive. This paper presents a random forest-based surrogate modeling technique to accelerate the evaluation of ABMs and demonstrates its use to calibrate an epidemiological ABM named CityCOVID via Markov chain Monte Carlo (MCMC). The technique is first outlined in the context of CityCOVID's quantities of interest, namely hospitalizations and deaths, by exploring dimensionality reduction via temporal decomposition with principal component analysis (PCA) and via sensitivity analysis. The calibration problem is then presented, and samples are generated to best match COVID-19 hospitalization and death numbers in Chicago from March to June in 2020. Further, these results are compared with previous approximate Bayesian calibration (IMABC) results, and their predictive performance is analyzed, showing improved performance with a reduction in computation.

60 APPLIED LIFE SCIENCES↗

Photometric redshift uncertainties in weak gravitational lensing shear analysis: models and marginalization

ABSTRACT Recovering credible cosmological parameter constraints in a weak lensing shear analysis requires an accurate model that can be used to marginalize over nuisance parameters describing potential sources of systematic uncertainty, such as the uncertainties on the sample redshift distribution n(z). Due to the challenge of running Markov chain Monte Carlo (MCMC) in the high-dimensional parameter spaces in which the n(z) uncertainties may be parametrized, it is common practice to simplify the n(z) parametrization or combine MCMC chains that each have a fixed n(z) resampled from the n(z) uncertainties. In this work, we propose a statistically principled Bayesian resampling approach for marginalizing over the n(z) uncertainty using multiple MCMC chains. We self-consistently compare the new method to existing ones from the literature in the context of a forecasted cosmic shear analysis for the HSC three-year shape catalogue, and find that these methods recover statistically consistent error bars for the cosmological parameter constraints for predicted HSC three-year analysis, implying that using the most computationally efficient of the approaches is appropriate. However, we find that for data sets with the constraining power of the full HSC survey data set (and, by implication, those upcoming surveys with even tighter constraints), the choice of method for marginalizing over n(z) uncertainty among the several methods from the literature may modify the 1σ uncertainties on Ωm–S8 constraints by ∼4 per cent, and a careful model selection is needed to ensure credible parameter intervals.

Zhang, Tianqing (ORCID:000000025596198X)↗

Understanding the Impacts of Biomass Blending on the Uncertainty of Hydrolyzed Sugar Yield from a Stochastic Perspective

Feedstock price and availability are key challenges for biorefinery development and biomass blending has been suggested as a route to overcome these limitations. However, the impacts of feedstock blending on the variability of yields of hydrolyzed sugar remained unclear. This study quantifies the uncertainties in the sugar yields from the blends of corn stover, switchgrass, and grass clippings by considering both variable and model uncertainties. The results indicate that feedstock blending reduces the uncertainties in sugar yields and delivers feedstock of more uniform quality. A further investigation on xxx demonstrates that the reduction in overall uncertainty is achieved by reduced compositional uncertainties of blended feedstock. Based on these results, the optimization of blending ratios was performed with respect to three objectives: (1) probability of meeting the sugar yield target; (2) expected sugar yields; and (3) sugar yield per unit feedstock expense, while satisfying constraints of feedstock availability and cost. In conclusion, the optimization method developed in this study, is readily applied to other combinations of feedstocks, biofuels production processes, and constraints.

09 BIOMASS FUELS↗

Uncertainty Quantification for a Multi-phase Carbon Equation of State Model

Many physics models have tunable parameters that are calibrated by matching the model output to experimental or calculated data. However, given that calibration data often contain uncertainty and that different model parameter sets might result in a very similar simulated output for a finite calibration data set, it is advantageous to provide an ensemble of parameter sets that are consistent with the calibration data. Uncertainty quantification (UQ) provides a means to generate such an ensemble in a statistically rigorous fashion. In this work, we perform UQ for a multi-phase equation of state (EOS) model for carbon containing the diamond, graphite, and liquid phases. We use a Bayesian framework for the UQ and introduce a novel strategy for including phase diagram information in the calibration. The method is highly general and accurately reproduces the calibration data without any material-specific prior knowledge of the EOS model parameters.

36 MATERIALS SCIENCE↗

Investigation of core impurity transport in DIII-D diverted negative triangularity plasmas

Abstract Tokamak operation at negative triangularity has been shown to offer high energy confinement without the typical disadvantages of edge pedestals (Marinoni et al 2021 Nucl. Fusion 61 116010). In this paper, we examine impurity transport in DIII-D diverted negative triangularity experiments. Analysis of charge exchange recombination spectroscopy reveals flat or hollow carbon density profiles in the core, and impurity confinement times consistently shorter than energy confinement times. Bayesian inferences of impurity transport coefficients based on laser blow-off injections and forward modeling via the Aurora package (Sciortino et al 2021 Plasma Phys. Control. Fusion 63 112001) show core cross-field diffusion to be higher in L-mode than in H-mode. Impurity profile shapes remain flat or hollow in all cases. Inferred radial profiles of diffusion and convection are compared to neoclassical, quasilinear gyrofluid, and nonlinear gyrokinetic simulations. Heat transport is observed to be better captured by reduced turbulence models with respect to particle transport. State-of-the-art gyrokinetic modeling compares favorably with measurements across multiple transport channels. Overall, these results suggest that diverted negative triangularity discharges may offer a path to a highly-radiative L-mode scenario with high core performance.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Bayesian model selection for GRB 211211A through multiwavelength analyses

ABSTRACT Although GRB 211211A is one of the closest gamma-ray bursts (GRBs), its classification is challenging because of its partially inconclusive electromagnetic signatures. In this paper, we investigate four astrophysical scenarios as possible progenitors for GRB 211211A: a binary neutron star merger, a black hole–neutron star merger, a core-collapse supernova, and an r-process enriched core collapse of a rapidly rotating massive star (a collapsar). We perform a large set of Bayesian multiwavelength analyses based on different models describing these scenarios and priors to investigate which astrophysical scenarios and processes might be related to GRB 211211A. Our analysis supports previous studies in which the presence of an additional component, likely related to r-process nucleosynthesis, is required to explain the observed light curves of GRB 211211A, as it cannot be explained solely as a GRB afterglow. Fixing the distance to about $350~\rm Mpc$, namely the distance of the possible host galaxy SDSS J140910.47+275320.8, we find a statistical preference for a binary neutron star merger scenario.

(transients:) gamma-ray bursts↗

Absolute cross section of the C 12 ( p , γ ) N 13 reaction

Solar neutrino measurements have recently reached a level of sensitivity such that CNO fluxes can now be experimentally determined. While these first measurements are still only sensitive to the higher energy neutrinos resulting from the β + decays of 15 Ο produced by the 14 Ν ⁡( p ,$\gamma$)⁢ 15 O reaction, future measurements will work towards detection of neutrinos from the β + decay of 13 N from the 12 C ⁡( p ,$\gamma$)⁢ 13 N reaction. Here, this paper reports on a recent measurement of the 12 C ⁡( p ,$\gamma$)⁢ 13 N reaction covering a broad laboratory energy range between 1.0 and 2.5 MeV. The measurement was made to better determine the overall normalization of the absolute cross section and to explore the interference effects between the two broad, overlapping resonances at proton energies of 0.460 and 1.689 MeV and the direct capture to the ground state of 13 N in the framework of a multichannel R -matrix analysis. This work takes into account previous radiative capture as well as elastic 12 C ( p , p ) 12 C scattering data, making uncertainty estimations using a Bayesian framework, to determine a reliable extrapolation of the low energy S factor towards the stellar energy range of CNO hydrogen burning. These new experimental results, and a detailed investigation of the past literature data, suggest that the resonant component of the cross section should be 30% lower than previously accepted.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Decision-making based on Markov decision process in integrated artificial reasoning framework—Part I: Theory

This paper presents a decision-making framework based on an integrated artificial reasoning framework and Markov decision process (MDP). The integrated artificial reasoning framework provides a physics-based approach that converts system information into state transition models, and the analysis result will be represented by the transition probabilities that can be used with an MDP to find a traceable and explainable optimal pathway. A dynamic Bayesian network (DBN) is well suited for representing the structure of an MDP. The causality information among process variables (or among subsystems) is mathematically represented in a DBN by the conditional probabilities of the node’s states provided different probabilities of the parent node’s states. To define node states in a physically understandable manner, we used multilevel flow modeling (MFM). An MFM follows the fundamental energy and mass conservation laws and supports the selection of process variables that represent the system of interest so that causal relations among process variables are properly captured. An MFM-based DBN supports developing state transition models in an MDP to capture the effect of process variables of system having physical relations. The operators of the target system can capture stochastic system dynamics as multiple subsystem state transitions based on their physical relations and uncertainties coming from component degradation or random failures. We analyzed a simplified exemplary system to illustrate an optimal operational policy using the suggested approach.

Markov decision process↗

Efficient Stochastic Inversion Using Adjoint Models and Kernel-PCA

Performing stochastic inversion on a computationally expensive forward simulation model with a high-dimensional uncertain parameter space (e.g. a spatial random field) is computationally prohibitive even with gradient information provided. Moreover, the ‘nonlinear’ mapping from parameters to observables generally gives rise to non-Gaussian posteriors even with Gaussian priors, thus hampering the use of efficient inversion algorithms designed for models with Gaussian assumptions. In this work, we propose a novel Bayesian stochastic inversion methodology, characterized by a tight coupling between a gradient-based Langevin Markov Chain Monte Carlo (LMCMC) method and a kernel principal component analysis (KPCA). This approach addresses the ‘curse-of-dimensionality’ via KPCA to identify a low-dimensional feature space within the high-dimensional and nonlinearly correlated spatial random field. Moreover, non-Gaussian full posterior probability distribution functions are estimated via an efficient LMCMC method on both the projected low-dimensional feature space and the recovered high-dimensional parameter space. We demonstrate this computational framework by integrating and adapting recent developments such as data-driven statistics-on-manifolds constructions and reduction-through-projection techniques to solve inverse problems in linear elasticity.

97 MATHEMATICS AND COMPUTING↗

A Growing Braking Index and Spin-down Swings for the Pulsar PSR B0540–69

The way pulsars spin down is not understood in detail, but a number of possible physical mechanisms produce a spin-down rate that scales as a power of the rotation rate ($\dot{v}$ α-$v$ n ), with the power-law index n called the braking index. PSR B0540−69 is a pulsar that in 2011, after 16 yr of spinning down with a constant braking index of 2.1, experienced a giant spin-down change and a reduction of its braking index to nearly zero. Here, we show that, following this episode, the braking index monotonically increased during a period of at least 4 yr and stabilized at ∼1.1. We also present an alternative interpretation of a more modest rotational irregularity that occurred in 2023, which was modeled as an anomalous negative step of the rotation rate. Our analysis shows that the 2023 observations can be equally well described as a transient swing of the spin-down rate (lasting ∼65 days), and the Bayesian evidence indicates that this model is strongly preferred.

79 ASTRONOMY AND ASTROPHYSICS↗