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At least 109 records · Page 6

Tracking the Rates and Mechanisms of Canopy Damage and Recovery Following Hurricane Maria Using Multitemporal Lidar Data

Hurricane Maria, a Category 4 storm, snapped and uprooted canopy trees, removed large branches, and defoliated vegetation across Puerto Rico. The magnitude of forest damages and the rates and mechanisms of forest recovery following Maria provide important benchmarks for understanding the ecology of extreme events. We used airborne Lidar data acquired before (2017) and after Maria (2018, 2020) to quantify landscape-scale changes in forest structure along a 439-ha elevational gradient (100–800 m) in the Luquillo Experimental Forest. Damages from Maria were widespread, with 73% of the study area losing ≥ 1 m in canopy height (mean = −7.1 m). Taller forests at lower elevations suffered more damage than shorter forests above 600 m. Yet only 13.5% of the study area had canopy heights ≤ 2 m in 2018, a typical threshold for forest gaps, highlighting the importance of damaged trees and advanced regeneration on post-storm forest structure. Heterogeneous patterns of regrowth and recruitment yielded shorter and more open forests by 2020. Nearly 45% of forests experienced initial height loss > 1 m (2017–2018) followed by rapid height gain > 1 m (2018–2020), whereas 21.6% of forests with initial height losses showed little or no height gain, and 17.8% of forests exhibited no height changes larger than ± 1 m in either period. Canopy layers < 10 m tall accounted for most increases in canopy height and fractional cover between 2018 and 2020, with gains split evenly between height growth and lateral crown expansion by surviving individuals. These findings benchmark rates of gap formation, crown expansion, and canopy closure following hurricane damage and highlight the diversity of ecosystem impacts from heterogeneous spatial patterns and vertical stratification of forest regrowth following a major disturbance event.

forest structure↗

Dynamic changes in evapotranspiration, canopy photosynthesis and expansive growth in open field under rapid fluctuating radiation

Abstract In open fields, plants experience dynamic changes in environment, particularly radiation, temperature, wind, and humidity but their short-term responses have not been adequately characterized under natural conditions. In this study, we assessed causal effects of rapid radiation fluctuation on seven plant parameters in open fields of cotton and sweet corn canopies. The parameters are evapotranspiration ( ET ), canopy photosynthesis indicated by CO2 flux from air to canopy ( FCO2 ), sensible heat energy flux ( H ), canopy conductance for water vapor ( gcw ), canopy surface temperature ( Ts ), shoot and leaf elongation rate, and stem diameter change. The energy and CO2 fluxes were measured with Bowen ratio/energy balance/CO2 gradient (BREB+) technique, using averaging time of 5 min. Shoot + leaf elongation and stem diameter change were monitored with position transducers using averaging time of 1 min. All parameters were all found to respond to change in radiation and transpiration within minutes or sooner. While radiation effects on canopy gas exchanges are expected, illuminating are the indirect but immediate effects on shoot + leaf growth and stem diameter change through radiation effects on transpiration and plant water status. A novel finding is that gcw also responded within minutes or sooner to radiation fluctuations and that FCO2 was related almost linearly to gcw . Results are discussed in terms of soil-plant-atmosphere continuum, and interpreted in terms of dynamic interactions between transpiration and plant water status. The clear inverse relationship between ET and elongation rate or stem diameter changes provides additional evidence supporting the validity of 5-min averaging for the BREB + technique.

Hsiao, Theodore C.↗

Estimating source-sink distributions and fluxes of reactive nitrogen and sulfur within a mixed forest canopy

The vertical source-sink distribution of air pollutants within and above forested canopies is necessary for describing the biological, physical, and chemical processes influencing the soil-vegetation-atmosphere exchange. Here, this study implemented inverse modeling methods to estimate the source-sink and flux profiles of reactive nitrogen (N) and sulfur (S) compounds from measurements of the mean concentration profiles of ammonia (NH 3 ), nitric acid (HNO 3 ), sulfur dioxide (SO 2 ), and particulate ammonium (NH 4 + ), nitrate (NO 3 − ), and sulfate (SO 4 2− ) at a forest site in the southern Appalachian Mountains. Three inverse approaches utilizing different approximations to scalar transport within the canopy were developed and evaluated against sensible heat flux measurements. The Eulerian model (EUL), which incorporates vertical velocity skewness, performed well in reproducing the turbulent heat fluxes and was subsequently used to calculate the chemical source-sink and flux profiles. Above-canopy fluxes of NH 3 were downward, indicating that the forest was a net sink of NH 3 . The soil/litter layer was both a source and a sink for NH 3 but the exchange rate at the forest floor was small. Fluxes of HNO 3 , SO 2 , NO 3 − , NH 4 + , and SO 4 2- were uni-directional (deposition only) between the air and the canopy/ground and increased monotonically from the forest floor to the canopy top. Crown foliage dominated the uptake of reactive N and S during the growing season, accounting for 80–90% of the total canopy-scale flux. Fluxes and canopy-ground partitioning estimated using the resistance-based Surface Tiled Aerosol and Gas Exchange (STAGE) model were generally comparable to EUL. The comparison highlights the need for improved parameterizations of litter exchange and NH 3 compensation points in resistance models for forest ecosystems. The findings here benefit the application of critical loads in forest ecosystems and guide further development of resistance-based exchange models.

54 ENVIRONMENTAL SCIENCES↗

Propagation method and planting density influence canopy developmental transition and biomass productivity in Miscanthus × giganteus

Understanding how establishment practices influence the mechanisms underlying Miscanthus × giganteus (miscanthus) productivity and canopy development is critical for optimizing management. Data was collected during the juvenile (2011–2013) and mature (2024) phases of a long-term field experiment established in Urbana, Illinois, to evaluate the effects of propagation method (plug propagation [PP] and rhizome propagation [RP]), planting density (1.0, 0.75, and 0.25 plants m⁻²), and nitrogen application (0 and 67 kg N ha⁻¹) on end-of-season biomass yield, tiller mass, tiller density, and tiller height. Linear regression models identified the dominant predictors of yield across stand ages and management regimes. Planting density, nitrogen (N) application, and propagation method significantly influenced early yield and canopy development. During the juvenile phase, biomass yield was driven by tiller density due to canopy expansion; in the mature phase, yield became driven by tiller mass. The PP plots produced higher tiller density than the RP plots, resulting in faster canopy closure and higher juvenile-phase yields. Rhizome-propagated (RP) plots produced lower tiller density, but individual tillers were 3.3–6.4 g tiller −1 heavier than PP tillers. After the canopy reached equilibrium, the PP and RP yields were similar because greater RP tiller mass compensated for its lower tiller density. Higher planting density resulted in greater yield and tiller density during the second year (2012), but this effect was absent from the third year (2013) onward. In the juvenile phase, N fertilization enhanced yield by 1.6–3.4 Mg ha −1 . Initiating fertilization in 2013 on unfertilized plots produced biomass similar to that in fertilized plots, suggesting yield recovery in the mature phase. These findings revealed that establishment strategies, including propagation method and planting density, influence juvenile miscanthus canopy development and productivity, transitioning from tiller-density- to mass-dominated yields, but not mature phase productivity.

09 BIOMASS FUELS↗

A scale-wise analysis of intermittent momentum transport in dense canopy flows

We investigate the intermittent dynamics of momentum transport and its underlying time scales in the near-wall region of the neutrally stratified atmospheric boundary layer in the presence of a vegetation canopy. This is achieved through an empirical analysis of the persistence time scales (periods between successive zero-crossings) of momentum flux events, and their connection to the ejection–sweep cycle. Using high-frequency measurements from the GoAmazon campaign, spanning multiple heights within and above a dense canopy, the analysis suggests that, when the persistence time scales ( $t_p$ ) of momentum flux events from four different quadrants are separately normalized by $\varGamma _{w}$ (integral time scale of the vertical velocity), their distributions $P(t_p/\varGamma _{w})$ remain height-invariant. This result points to a persistent memory imposed by canopy-induced coherent structures, and to their role as an efficient momentum-transporting mechanism between the canopy airspace and the region immediately above. Moreover, $P(t_p/\varGamma _{w})$ exhibits a power-law scaling at times $t_{p}<\varGamma _{w}$ , with an exponential tail appearing for $t_{p} \geq \varGamma _{w}$ . By separating the flux events based on $t_p$ , we discover that around 80 % of the momentum is transported through the long-lived events ( $t_{p} \geq \varGamma _{w}$ ) at heights immediately above the canopy, while the short-lived ones ( $t_{p} < \varGamma _{w}$ ) only contribute marginally ( $\approx 20\,\%$ ). To explain the role of instantaneous flux amplitudes in momentum transport, we compare the measurements with newly developed surrogate data and establish that the range of time scales involved with amplitude variations in the fluxes tends to increase as one transitions from within to above the canopy.

Mechanics↗

A Vertically Resolved Canopy Improves Chemical Transport Model Predictions of Ozone Deposition to North Temperate Forests

Abstract Dry deposition is the second largest tropospheric ozone (O 3 ) sink and occurs through stomatal and nonstomatal pathways. Current O 3 uptake predictions are limited by the simplistic big‐leaf schemes commonly used in chemical transport models (CTMs) to parameterize deposition. Such schemes fail to reproduce observed O 3 fluxes over terrestrial ecosystems, highlighting the need for more realistic treatment of surface‐atmosphere exchange in CTMs. We address this need by linking a resolved canopy model (1D Multi‐Layer Canopy CHemistry and Exchange Model, MLC‐CHEM) to the GEOS‐Chem CTM and use this new framework to simulate O 3 fluxes over three north temperate forests. We compare results with in situ measurements from four field studies and with standalone, observationally constrained MLC‐CHEM runs to test current knowledge of O 3 deposition and its drivers. We show that GEOS‐Chem overpredicts observed O 3 fluxes across all four studies by up to 2×, whereas the resolved‐canopy models capture observed diel profiles of O 3 deposition and in‐canopy concentrations to within 10%. Relative humidity and solar irradiance are strong O 3 flux drivers over these forests, and uncertainties in those fields provide the largest remaining source of model deposition biases. Flux partitioning analysis shows that: (a) nonstomatal loss accounts for 60% of O 3 deposition on average; (b) in‐canopy chemistry makes only a small contribution to total O 3 fluxes; and (c) the CTM big‐leaf treatment overestimates O 3 ‐driven stomatal loss and plant phytotoxicity in these temperate forests by up to 7×. Results motivate the application of fully online vertically explicit canopy schemes in CTMs for improved O 3 predictions.

Vermeuel, Michael P. [Department of Soil, Water, a↗

Canopy damage and recovery following Hurricane Maria using multitemporal lidar data, Mar/2017 - Mar/2020, Puerto Rico

Hurricane Maria (Category 4) snapped and uprooted canopy trees, removed large branches, and defoliated vegetation across Puerto Rico. The magnitude of forest damages and the rates and mechanisms of forest recovery following Maria provide important benchmarks for understanding the ecology of extreme events. We used airborne lidar data acquired before (2017) and after Maria (2018, 2020) to quantify landscape-scale changes in forest structure along a 439-ha elevational gradient (100 to 800 m) in the Luquillo Experimental Forest. Damages from Maria were widespread, with 73% of the study area losing ≥1 m in canopy height (mean = -7.1 m). Taller forests at lower elevations suffered more damage than shorter forests above 600 m. Yet only 13% of the study area had canopy heights ≤2 m in 2018, a typical threshold for forest gaps, highlighting the importance of damaged trees and advanced regeneration on post-storm forest structure. Heterogeneous patterns of regrowth and recruitment yielded shorter and more open forests by 2020. Nearly 45% of forests experienced initial height loss (<-1 m, 2017-2018) followed by rapid height gain (>1 m, 2018-2020), whereas 21.6% of forests with initial height losses showed little or no height gain, and 17.8% of forests exhibited no structural changes >|1| m in either period. Canopy layers <10 m accounted for most increases in canopy height and fractional cover between 2018-2020, with gains split evenly between height growth and lateral crown expansion by surviving individuals. These findings benchmark rates of gap formation, crown expansion, and canopy closure following hurricane damage. Included in the attached zip file are four TIF and four KML files.

54 ENVIRONMENTAL SCIENCES↗

Canopy spectra, Feb2017, PA-SLZ: Panama

Canopy spectra of sunlit canopy of Guarea kunthiana, Brosimum utile, Terminalia amazonia (TERMAM), Vochysia ferruginea (VOCHFE), Miconia borealis (MICOBO) and Guatteria dumetorum (GUATDU) species from the Smithsonian Tropical Research Institute (STRI) canopy crane site in the San Lorenzo National Park, Republic of Panama (PA-SLZ: Bosque Protector San Lorenzo). Canopy spectra were measured at 1:20 – 2 pm on 22 February 2017, using a SVC spectroradiometer. This data package includes the raw SVC data (*.sig), processed data of individual spectra, and processed spectra averaged over the canopy of each of the six trees measured (*.csv). The package also includes photographs of the canopy spectral targets, metadata and the instrument manual. This data was collected as part of the 2017 Brookhaven National Laboratory – Smithsonian Tropical Research Institute leaf traits by age campaign.

54 ENVIRONMENTAL SCIENCES↗

Canopy reflectance spectroscopy, thermal images and digital photographs, San Lorenzo, Panama, 2020

This data package comprises reflectance spectra, thermal and visible images of top of canopy tree crowns at the San Lorenzo Protected Area, Panama. Data were collected using the Smithsonian Tropical Research Institute (STRI) canopy access crane, from positions approximately 4 m above the target tree canopy. Canopy reflectance spectra were collected using an HR-1024i full range spectroradiometer (350–2500 nm, SVC, Poughkeepsie, NY, USA) with a 14-degree lens. Canopy thermal images were captured using an 8640-S series USB Calibrated Thermal Camera (ICI International, Beaumont, TX, USA). Visible images were collected using an AW130 waterproof/shockproof camera (Nikon, Tokyo, Japan). Data were collected on three days, on 16 canopies from 10 tree species. On both January 30, 2020, and February 27, 2020, we collected spectra at three time points, in the morning, midday, and afternoon. On February 18, 2020, we collected data around midday only. Due to technical issues, digital photography was collected on 30 January only. This dataset includes unprocessed data only, including spectral data (.sig or .sed), thermal images (.i16), and photographs (.raw), a detailed method description (.pdf), species information (.csv) and ESS-DIVE file-level metadata (FLMD.csv).

54 ENVIRONMENTAL SCIENCES↗

Full spectrum (350-2500 nm) leaf and canopy spectral reflectance, Seward Peninsula, Alaska, 2019

Full-range (350 - 2500 nm) leaf and canopy reflectance spectra of various Arctic tundra ecosystem endmembers, including species-level leaf reflectance, canopy-scale species endmember spectra, plot-scale spectra, and transect spectra. These data were collected in support of ongoing NASA ABoVE AVIRIS data synthesis work. The datasets were collected at the NGEE-Arctic watershed sites, Kougarok MM64 and MM80, and Teller MM27 on the Seward Peninsula, Alaska. The data were collected in July 2019 using a full-range Spectra Vista Corporation (SVC) HR-1024i spectroradiometer. Leaf-level spectra were collected with the original SVC leaf clip/plant probe connected to the spectrometer through a 1.15 meter long fiber optic cable, while canopy-scale reflectance was collected with an 8-degree field-of-view (FOV) foreoptic lens. All spectral measurements were collected as calibrated surface radiance and converted to surface reflectance using a 99.99% reflective Spectralon white reference standard. For those canopy spectra collected with associated functional trait data, the FOV of the instrument was positioned to include the same leaves harvested for functional trait measurements, including leaf mass per area (LMA) and foliar carbon and nitrogen content (see leaf trait data package for these data). Canopy spectra were obtained for 23 different species, and leaf spectra for 8 species. This data package includes processed canopy and leaf spectra (*.csv), processed dGPS locations (*.csv and *.kmz), digital photographs of spectral targets (*.jpg) and raw data from spectroradiometer and dGPS instruments (compressed as tar.gz). Metadata files include data descriptions (_dd.csv) for tabular data and a key to species symbols used in data files. All included files are listed and described in NGA212_flmd.csv.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a 15-year research effort (2012-2027) to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

Determining density of maize canopy. 1: Digitized photography

The relationship between different densities of maize (Zea mays L.) canopies and the energy reflected by these canopies was studied. Field plots were laid out, representing four growth stages of maize, on a dark soil and on a very light colored surface soil. Spectral and spatial data were obtained from color and color infrared photography taken from a vertical distance of 10 m above the maize canopies. Estimates of ground cover were related to field measurements of leaf area index. Ground cover was predicted from leaf area index measurements by a second order equation. Color infrared photography proved helpful in determining the density of maize canopy on dark soils. Color photography was useful for determining canopy density on light colored soils. The near infrared dye layer is the most valuable in canopy density determinations.

Stoner, E. R.↗

Bidirectional plant canopy reflection models derived from the radiation transfer equation

A collection of bidirectional canopy reflection models was obtained from the solution of the radiation transfer equation for a horizontally homogeneous canopy. A phase function is derived for a collection of bidirectionally reflecting and transmitting planar elements characterized geometrically by slope and azimuth density functions. Two approaches to solving the radiation transfer equation for the canopy are presented. One approach factors the radiation transfer equation into a solvable set of three first-order linear differential equations by assuming that the radiation field within the canopy can be initially approximated by three components: uniformly diffuse downwelling, uniformly diffuse upwelling, and attenuated specular. The solution to these equations, which can be iterated to any degree of accuracy, was used to obtain overall canopy reflection from the formal solution to the radiation transfer equation. A programable solution to canopy overall bidirectional reflection is given for this approach. The special example of Lambertian leaves with constant leaf bidirectional reflection and scattering functions is considered, and a programmable solution for this example is given. The other approach to solving the radiation transfer equation, a generalized Chandrasekhar technique, is presented in the appendix.

Beeth, D. R.↗

A laser technique for characterizing the geometry of plant canopies

The interception of solar power by the canopy is investigated as a function of solar zenith angle (time), component of the canopy, and depth into the canopy. The projected foliage area, cumulative leaf area, and view factors within the canopy are examined as a function of the same parameters. Two systems are proposed that are capable of describing the geometrical aspects of a vegetative canopy and of operation in an automatic mode. Either system would provide sufficient data to yield a numerical map of the foliage area in the canopy. Both systems would involve the collection of large data sets in a short time period using minimal manpower.

Vanderbilt, V. C.↗

Plant canopy light absorption model with application to wheat

A light absorption model (LAM) for vegetative plant canopies has been derived from the Suits reflectance model. From the LAM the absorption of light in the photosynthetically active region of the spectrum (400-700 nm) has been calculated for a Penjamo wheat crop for several situations including (a) the percent absorption of the incident radiation by a canopy of LAI 3.1 having a four-layer structure, (b) the percent absorption of light by the individual layers within a four-layer canopy and by the underlying soil, (c) the percent absorption of light by each vegetative canopy layer for variable sun angle, and (d) the cumulative solar energy absorbed by the developing wheat canopy as it progresses from a single layer through its growth stages to a three-layer canopy. This calculation is also presented as a function of the leaf area index and is shown to be in agreement with experimental data reported by Kanemasu on Plainsman V wheat.

Chance, J. E.↗

Simulation of solar radiation absorption in vegetation canopies

A solar radiation canopy absorption model, including multiple scattering effects, was developed and tested for a lodgepole pine (Pinus contorta) canopy. Reflectance above the canopy, spectral transmittance to the ground layer, and geometric and spectral measurements of canopy elements were made. Relatively large differentials occurred in spectral absorption by canopy layers, especially in the photosynthetically active region, as a function of solar zenith angle. In addition, the proportion of total global irradiance absorbed by individual layers varied greatly as a function of solar zenith angle. However, absorption by the entire canopy system remained relatively constant.

Kimes, D. S.↗

Inversion of vegetation canopy reflectance models for estimating agronomic variables. II - Use of angle transforms and error analysis as illustrated by Suits' model

The technique for inverting a vegetation canopy reflectance model described earlier (Goel and Strebel, 1983) is investigated further. The novel concept of an 'angle transform' is introduced. This concept allows the formation of functions of reflectances at different view zenith and azimuth angles, which are either sensitive or insensitive to a certain agronomic parameter. A proper combination of these functions can allow determination of all the important agronomic and spectral parameters from measured canopy reflectance data. The technique is demonstrated using Suits' (1972) model for homogeneous canopies. It is shown that leaf area index, leaf reflectance and transmittance, and average leaf angle all can be determined from the canopy reflectance at a set of selected view zenith and azimuth angles. A sensitivity analysis of the calculated values to the errors in the data is also carried out. Guidelines are formulated for the number and types of observations required to obtain the values of a particular canopy variable to within a given degree of accuracy for a given level of error in the measurement of canopy reflectance.

Goel, N. S.↗

Modeling the directional reflectance from complete homogeneous vegetation canopies with various leaf-orientation distributions

The directional-reflectance distributions of radiant flux from homogeneous vegetation canopies with greater than 90 percent ground cover are analyzed with a radiative-transfer model. The model assumes that the leaves consist of small finite planes with Lambertian properties. Four theoretical canopies with different leaf-orientation distributions were studied: erectophile, spherical, planophile, and heliotropic canopies. The directional-reflectance distributions from the model closely resemble reflectance distributions measured in the field. The physical scattering mechanisms operating in the model explain the variations observed in the reflectance distributions as a function of leaf-orientation distribution, solar zenith angle, and leaf transmittance and reflectance. The simulated reflectance distribution show unique characteristics for each canopy. The basic understanding of the physical scattering properties of the different canopy geometries gained in this study provide a basis for developing techniques to infer leaf-orientation distributions of vegetation canopies from directional remote-sensing measurements.

Kimes, D. S.↗

Modeling the radiant transfers of sparse vegetation canopies

The scattering dynamics of sparse vegetation canopies were studied within the framework of the three-dimensional radiative transfer model of Kimes (1984). The model was upgraded by including an algorithm for the anisotropic scattering of a soil boundary. Validation of the model was carried out using measured directional reflectance data for two canopies exhibiting typical scattering behavior with low and intermediate vegetation density. The canopies were: an orchard grass canopy; and a hard wheat canopy. A number of factors were found contributing to the final reflectance distribution of the canopies, including: (1) the strong anisotropic scattering properties of the soil; (2) the geometric effect of the vegetation probability gap function on the soil anisotropy and solar irradiance; and (3) the anisotropic scattering of vegetation which is controlled by the phase function and the layering of leaves. The application of the theoretical results to the development of earth-observing sensor systems is discussed.

Kimes, D. S.↗