Results for “Consensus” — Page 6

DOE OSTI2025

STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies

The interdisciplinary nature of microbiome research, coupled with the generation of complex multi-omics data, makes knowledge sharing challenging. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines provide a checklist for the reporting of study information, experimental design and analytical methods within a scientific manuscript on human microbiome research. Here, in this Consensus Statement, we present the standards for technical reporting in environmental and host-associated microbiome studies (STREAMS) guidelines. The guidelines expand on STORMS and include 67 items to support the reporting and review of environmental (for example, terrestrial, aquatic, atmospheric and engineered), synthetic and non-human host-associated microbiome studies in a standardized and machine-actionable manner. Based on input from 248 researchers spanning 28 countries, we provide detailed guidance, including comparisons with STORMS, and case studies that demonstrate the usage of the STREAMS guidelines. In conclusion, STREAMS, like STORMS, will be a living community resource updated by the Consortium with consensus-building input of the broader community.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Benefits and Limits of Phasing Alleles for Network Inference of Allopolyploid Complexes

Abstract Accurately reconstructing the reticulate histories of polyploids remains a central challenge for understanding plant evolution. Although phylogenetic networks can provide insights into relationships among polyploid lineages, inferring networks may be hindered by the complexities of homology determination in polyploid taxa. We use simulations to show that phasing alleles from allopolyploid individuals can improve phylogenetic network inference under the multispecies coalescent by obtaining the true network with fewer loci compared with haplotype consensus sequences or sequences with heterozygous bases represented as ambiguity codes. Phased allelic data can also improve divergence time estimates for networks, which is helpful for evaluating allopolyploid speciation hypotheses and proposing mechanisms of speciation. To achieve these outcomes in empirical data, we present a novel pipeline that leverages a recently developed phasing algorithm to reliably phase alleles from polyploids. This pipeline is especially appropriate for target enrichment data, where the depth of coverage is typically high enough to phase entire loci. We provide an empirical example in the North American Dryopteris fern complex that demonstrates insights from phased data as well as the challenges of network inference. We establish that our pipeline (PATÉ: Phased Alleles from Target Enrichment data) is capable of recovering a high proportion of phased loci from both diploids and polyploids. These data may improve network estimates compared with using haplotype consensus assemblies by accurately inferring the direction of gene flow, but statistical nonidentifiability of phylogenetic networks poses a barrier to inferring the evolutionary history of reticulate complexes.

Evolutionary Biology↗

DOE OSTI2025

Matrix Metalloproteinases as Candidate Antigenic Determinants for Anti‐Tumor Autoantibodies in Human Ovarian Cancer: A Post Hoc Analysis

Circulating antibodies in patients with cancer can facilitate the identification of accessible epitopes on autoantigens expressed by tumors. To identify previously unrecognized protein targets in ovarian cancer, we computationally assessed a heptapeptide consensus motif (VPELGHE, flanked by two cysteine residues yielding a cyclic nonapeptide under oxidizing conditions) previously discovered via phage display-based epitope mapping of autoantibodies in patients. Eight proteins associated with ovarian cancer encompass amino acid sequences similar to the consensus motif and were, therefore, considered as candidate native autoantigens. Among these candidate targets, however, matrix metalloproteinase 14 (MMP14) demonstrates gene expression that is both high and negatively correlated with survival in ovarian cancer patient cohorts. MMP14 protein levels are also stable in tumor versus non-tumor tissues. Moreover, the corresponding heptapeptide mimic in MMP14 occurs within an α-helical secondary structural element observed in its catalytic domain. These findings demonstrate that a subset of patient-derived autoantibodies may interact with a previously unknown antigenic epitope found in MMP14 and other MMPs, thereby providing opportunities for the development of new targeted agents.

Biochemistry & Molecular Biology↗

DOE OSTI2024

Game Theoretic Orchestration for Cooperation among Power Distribution System Applications

The evolving transformation with the proliferation of distributed energy resources and advanced metering, necessitates advanced distribution systems to integrate and orchestrate a large number of grid-edge devices while also serving multiple system-level objectives such as resilience, decarbonization, equity and other system mandates. The parallel deployment and control of resources towards achieving diverse objectives may lead to conflicts between applications that want to control overlapping sets of device setpoints, potentially leading to oscillatory behavior and suboptimal performance. This work aims at leveraging game theoretic framework to drive cooperative behavior among competitive applications. The work proposes a weighted-consensus based game design to facilitate conflict resolution through consensus-building iterations for modular platform. Simulation-based evaluation on a sample test system demonstrates the performance the proposed deconfliction strategy in resolving operational conflicts and achieving close-to-optimal trade off among the applications. Results also compare the proposed strategy with a distribution optimization approach and illustrate it effectiveness in diverse apps regardless of their design while also incentivizing apps with flexible design.

Advanced distribution operations, cooperation, app↗

DOE OSTI2025

Microbiome data management in action workshop: Atlanta, GA, USA, June 12–13, 2024

Microbiome research is revolutionizing human and environmental health, but the value and reuse of microbiome data are significantly hampered by the limited development and adoption of data standards. While several ongoing efforts are aimed at improving microbiome data management, significant gaps still remain in terms of defining and promoting adoption of consensus standards for these datasets. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines for human microbiome research have been endorsed and successfully utilized by many research organizations, publishers, and funding agencies, and have been recognized as a consensus community standard. No equivalent effort has occurred for environmental, synthetic, and non-human host-associated microbiomes. To address this growing need within the microbiome research community, we convened the Microbiome Data Management in Action Workshop (June 12–13, 2024, in Atlanta, GA, USA), to bring together key decision makers in microbiome science including researchers, publishers, funders, and data repositories. The 50 attendees, representing the diverse and interdisciplinary nature of microbiome research, discussed recent progress and challenges, and brainstormed actionable recommendations and paths forward for coordinated environmental microbiome data management and the modifications necessary for the STORMS guidelines to be applied to environmental, non-human host, and synthetic microbiomes. The outcomes of this workshop will form the basis of a formalized data management roadmap to be implemented across the field. These best practices will drive scientific innovation now and in years to come as these data continue to be used not only in targeted reanalyses but in large-scale models and machine learning efforts.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Workshop on Radiographic Imaging and Applications Research and Development Recommendations for Field Radiography

The Workshop on Radiographic Imaging and Applications (WORIA) brought together subject matter experts from industry, academia, US and UK government agencies, and the national laboratories to provide a forum to liaise and share information between technology developers in government and industry, end users, and mission stakeholder to produce an “expert consensus view” regarding future research directions toward a comprehensive radiography/penetrating imaging portfolio in the Defense Nuclear Nonproliferation Research and Development Near Field Detection Portfolio. The inaugural WORIA was held at the Spallation Neutron Source at Oak Ridge National Laboratory on February 7–9, 2023. The inaugural WORIA meeting focused on field radiography applications, or situations in which a portable imaging system must be brought to an item of interest (rather than the item brought to an imaging facility). This report documents consensus views derived from the meeting and provides research and development recommendations for federal program managers.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

DOE OSTI2024

Peer-to-peer communication control for resilient operations of networked cyberphysical systems

This report includes two main accomplishments of the peer-to-peer communication control for resilient operation of networked microgrids project in FY24, which include a scheme for cyberattack-aware coordination of networked microgrids for supporting voltages of bulk power systems and a scheme for price signal-based operations of EV-rich networked microgrids with mixed ownership. First, the cyberattack-aware scheme enables networked microgrids to distributedly determine the amount of reactive power injection to support the voltage of bulk power system (BPS) in a fair manner. In this scheme, a risk-informed algorithm is presented to generate the peer-to- peer (P2P) communication graph with minimal risk of attack on communication links. To deal with cyberattacks on MG controllers, the resilient consensus algorithm (CA) is utilized for MG controllers to robustly estimate the total reactive power headroom, from which the MGs can accurately provide the needed amount of reactive power injection for supporting the voltage of BPS. The CA implementation and performance within the P2P communication framework are demonstrated on the IEEE 39-bus system with 6 microgrids contained in the distribution feeder under different cyberattack scenarios. Second, the price-based scheme enables the usage of the real-time price signal for the operations of electric vehicle (EV)-rich networked-microgrids with mixed ownership, in which not all the microgrids can communicate with the distribution system operator (DSO). In this scheme, a max consensus is introduced to enable the real-time price signal to be propagated from the DSO to all the microgrids, from which each microgrid controller will manage the DERs to balance the load demand and the power injection from the EV charging stations within its microgrid. Numerical results over one day with 288 slots of 5-minute intervals on the modified 123-node test feeder including 3 microgrids with high penetration of EV are presented to evaluate how the price signal affects the operations of networked microgrids under different charging strategies of the EV charging stations. The result indicates that our proposed EVCS (dis)charging strategy, which leverages the flexibility of EVs to support the grid through discharging during peak demand, proves to be a cost-effective solution that reduces operational costs while improving the social welfare of EV charging.

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2024

Investigation of Ammonia Carrier Materials for Next Generation Ammonia Dosing System - CRADA 334 (Abstract)

Lean-burn gasoline and diesel engines can offer substantially higher fuel efficiency, good driving performance, and reduced carbon dioxide emission compared to stoichiometric gasoline engines. Various catalyst technologies have been developed to remove the pollutants from these engines. For example, a three-way catalyst (TWC) is used to remove hydrocarbons (HC), carbon monoxide (CO), and nitrogen oxides (NOx) from gasoline engines during the stoichiometric conditions. During the lean-burn conditions, a TWC or a diesel oxidation catalyst (DOC) is used to control HC and CO emissions. NOx is removed by either lean NOx trap catalyst (LNT) that can store NOx under lean conditions and reduce NOx under rich conditions, or selective catalytic reduction catalyst (SCR) that can selectively remove NOx with a reducing agent. Among the NOx reduction catalyst technologies, SCR offers a number of advantages, including excellent NOx reduction efficiency over a wide range of temperatures and overall lower system cost. In fact, the SCR technology using ammonia (NH3) as reductant has been proven effective and used commercially for the removal of NOx emissions from stationary sources since the 1970s. Currently, SCR is being used to meet the NOx emission standards for diesel engines in Europe and North America, and also being considered for meeting the future NOx emission standards for lean-burn gasoline engines. Because of the challenges associated with storage, handling and transportation of ammonia on a vehicle, aqueous urea solution (e.g., Diesel Exhaust Fluid, AdBlue) has been developed as ammonia storage compound for mobile applications. When the aqueous urea solution is sprayed into exhaust gas stream, urea is decomposed to release ammonia, which then reduces NOx over the downstream SCR catalyst. Although aqueous urea solution technology has enabled automakers and engine manufacturers to meet the current NOx emission standards, this process of releasing ammonia requires a hot exhaust gas and sufficient mixing, creating challenges for low temperature NOx emission control and aftertreatment system packaging. For these reasons, alternative technologies have been developed as ammonia sources (e.g., solid urea, ammonium carbamate, metal ammine chloride) during the past few years. These technologies promise more convenient handling and distribution of ammonia sources, and help maximize the low-temperature performance of SCR catalysts and reduce the overall system volume and weight. However, none of these alternative technologies can be successfully implemented without the industry consensus. Therefore, the USCAR SCR work group, which is comprised of representatives from GM, Ford, and Chrysler, has decided to investigate the potential alternative ammonia carriers, define common standard vehicle interfaces, and address personal and environmental safety concerns with part suppliers and chemical companies. Under this CRADA Project, USCAR and Battelle will investigate alternative ammonia carrier materials that are currently under development. Based on the data and information derived under the CRADA project, the USCAR SCR work group plans to build the consensus and make recommendations for the industry.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2024

Investigation of Ammonia Carrier Materials for Next Generation Ammonia Dosing System - CRADA 334 (Abstract)

Lean-burn gasoline and diesel engines can offer substantially higher fuel efficiency, good driving performance, and reduced carbon dioxide emission compared to stoichiometric gasoline engines. Various catalyst technologies have been developed to remove the pollutants from these engines. For example, a three-way catalyst (TWC) is used to remove hydrocarbons (HC), carbon monoxide (CO), and nitrogen oxides (NOx) from gasoline engines during the stoichiometric conditions. During the lean-burn conditions, a TWC or a diesel oxidation catalyst (DOC) is used to control HC and CO emissions. NOx is removed by either lean NOx trap catalyst (LNT) that can store NOx under lean conditions and reduce NOx under rich conditions, or selective catalytic reduction catalyst (SCR) that can selectively remove NOx with a reducing agent. Among the NOx reduction catalyst technologies, SCR offers a number of advantages, including excellent NOx reduction efficiency over a wide range of temperatures and overall lower system cost. In fact, the SCR technology using ammonia (NH3) as reductant has been proven effective and used commercially for the removal of NOx emissions from stationary sources since the 1970s. Currently, SCR is being used to meet the NOx emission standards for diesel engines in Europe and North America, and also being considered for meeting the future NOx emission standards for lean-burn gasoline engines. Because of the challenges associated with storage, handling and transportation of ammonia on a vehicle, aqueous urea solution (e.g., Diesel Exhaust Fluid, AdBlue) has been developed as ammonia storage compound for mobile applications. When the aqueous urea solution is sprayed into exhaust gas stream, urea is decomposed to release ammonia, which then reduces NOx over the downstream SCR catalyst. Although aqueous urea solution technology has enabled automakers and engine manufacturers to meet the current NOx emission standards, this process of releasing ammonia requires a hot exhaust gas and sufficient mixing, creating challenges for low temperature NOx emission control and aftertreatment system packaging. For these reasons, alternative technologies have been developed as ammonia sources (e.g., solid urea, ammonium carbamate, metal ammine chloride) during the past few years. These technologies promise more convenient handling and distribution of ammonia sources, and help maximize the low-temperature performance of SCR catalysts and reduce the overall system volume and weight. However, none of these alternative technologies can be successfully implemented without the industry consensus. Therefore, the USCAR SCR work group, which is comprised of representatives from GM, Ford, and Chrysler, has decided to investigate the potential alternative ammonia carriers, define common standard vehicle interfaces, and address personal and environmental safety concerns with part suppliers and chemical companies. Under this CRADA Project, USCAR and Battelle will investigate alternative ammonia carrier materials that are currently under development. Based on the data and information derived under the CRADA project, the USCAR SCR work group plans to build the consensus and make recommendations for the industry.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

NASA NTRS1974

Forecast of jet engine exhaust emissions for future high altitude commercial aircraft

Projected minimum levels of engine exhaust emissions that may be practicably achievable for future commercial aircraft operating at high altitude cruise conditions are presented. The forecasts are based on: (1) current knowledge of emission characteristics of combustors and augmentors; (2) the current status of combustion research in emission reduction technology; (3) predictable trends in combustion systems and operating conditions as required for projected engine designs that are candidates for advanced subsonic or supersonic commercial aircraft. Results are presented for cruise conditions in terms of an emission index, g pollutant/kg fuel. Two sets of engine exhaust emission predictions are presented: the first, based on an independent NASA study and the second, based on the consensus of an ad hoc committee composed of industry, university, and government representatives. The consensus forecasts are in general agreement with the NASA forecasts.

Grobman, J.↗

NASA NTRS1974

Forecast of jet engine exhaust emissions for future high altitude commercial aircraft

Projected minimum levels of engine exhaust emissions that may be practicably achievable for future commercial aircraft operating at high altitude cruise conditions are presented. The forecasts are based on: (1) current knowledge of emission characteristics of combustors and augmentors; (2) the current status of combustion research in emission reduction technology; and (3) predictable trends in combustion systems and operating conditions as required for projected engine designs that are candidates for advanced subsonic or supersonic commercial aircraft. Results are presented for cruise conditions in terms of an emission index, g pollutant/kg fuel. Two sets of engine exhaust emission predictions are presented: the first, based on an independent NASA study and the second, based on the consensus of an ad hoc committee composed of industry, university, and government representatives. The consensus forecasts are in general agreement with the NASA forecasts.

Grobman, J.↗

NASA NTRS1992

Survivable algorithms and redundancy management in NASA's distributed computing systems

The design of survivable algorithms requires a solid foundation for executing them. While hardware techniques for fault-tolerant computing are relatively well understood, fault-tolerant operating systems, as well as fault-tolerant applications (survivable algorithms), are, by contrast, little understood, and much more work in this field is required. We outline some of our work that contributes to the foundation of ultrareliable operating systems and fault-tolerant algorithm design. We introduce our consensus-based framework for fault-tolerant system design. This is followed by a description of a hierarchical partitioning method for efficient consensus. A scheduler for redundancy management is introduced, and application-specific fault tolerance is described. We give an overview of our hybrid algorithm technique, which is an alternative to the formal approach given.

Malek, Miroslaw↗

NASA NTRS1992

Software reliability through fault-avoidance and fault-tolerance

Accomplishments in the following research areas are summarized: structure based testing, reliability growth, and design testability with risk evaluation; reliability growth models and software risk management; and evaluation of consensus voting, consensus recovery block, and acceptance voting. Four papers generated during the reporting period are included as appendices.

Vouk, Mladen A.↗

NASA NTRS1993

Strategic factors in the development of the National Technology Transfer Network

Broad consensus among industry and government leaders has developed over the last decade on the importance of applying the U.S. leadership in research and development (R&D) to strengthen competitiveness in the global marketplace, and thus enhance national prosperity. This consensus has emerged against the backdrop of increasing economic competition, and the dramatic reduction of military threats to national security with the end of the Cold War. This paper reviews the key factors and considerations that shaped - and continue to influence - the development of the Regional Technoloty Transfer Centers (RTTC) and the National Technology Transfer Center (NTTC). Also, the future role of the national network in support of emerging technology policy initiatives will be explored.

Root, Jonathan F.↗

NASA NTRS1990

Multiversion software reliability through fault-avoidance and fault-tolerance

In this project we have proposed to investigate a number of experimental and theoretical issues associated with the practical use of multi-version software in providing dependable software through fault-avoidance and fault-elimination, as well as run-time tolerance of software faults. In the period reported here we have working on the following: We have continued collection of data on the relationships between software faults and reliability, and the coverage provided by the testing process as measured by different metrics (including data flow metrics). We continued work on software reliability estimation methods based on non-random sampling, and the relationship between software reliability and code coverage provided through testing. We have continued studying back-to-back testing as an efficient mechanism for removal of uncorrelated faults, and common-cause faults of variable span. We have also been studying back-to-back testing as a tool for improvement of the software change process, including regression testing. We continued investigating existing, and worked on formulation of new fault-tolerance models. In particular, we have partly finished evaluation of Consensus Voting in the presence of correlated failures, and are in the process of finishing evaluation of Consensus Recovery Block (CRB) under failure correlation. We find both approaches far superior to commonly employed fixed agreement number voting (usually majority voting). We have also finished a cost analysis of the CRB approach.

Vouk, Mladen A.↗

NASA NTRS1997

Constraints on the Magnitude of Vertical and Lateral Mass Transport on the Moon

The role of vertical and lateral mass transport of crustal materials on the observed patterns of lunar surface composition, and the effects on our understanding of the geologic evolution of the planet, have been the subject of much debate in the lunar science community. The primary consensus that emerged from analyses of these processes in the 1970's and 1980's was that vertical and lateral mixing through impact gardening was a relatively inefficient process, and not likely to have contributed significantly to compositional units and variations on the Moon. The supporting evidence for this view is that unit boundaries (e.g. mare-highland contacts, contacts between mare color units) are still apparently quite distinct and sharp despite several aeons of impact activity, and cores from the Apollo landing sites did not show any evidence of widespread homogenization of the surface composition, nor distinct compositional gradients across geologic boundaries. In addition, modeling of vertical and lateral transport generally showed that the effects on composition should be confined to horizontal scales of about a kilometer and vertical scales of a meter. The problem with this consensus is that there is ample contradictory evidence. The fundamental discovery of Wood et al. (1970) was made possible by significant horizontal transport of highland material to the center of Mare Tranquillitatis. The continuous and discontinuous ejecta from the crater Copernicus has clearly influenced the surface composition of a large area of the lunar maria, while rays and ejecta from many highland craters are easily recognized in and around the nearside maria. Despite this contrary evidence, there have been few detailed studies to quantify the amount and rate of material redistribution through impact processes (a notable exception is reported in the paper by Pieters et al, 1985), largely because data adequate to critically analyze this process were lacking. However, the multispectral images acquired by the Galileo and Clementine missions now permit the investigation of this process.

Mustard, John F.↗

NASA NTRS1998

Data Quality Assessment Methods for the Eastern Range 915 MHz Wind Profiler Network

The Eastern Range installed a network of five 915 MHz Doppler Radar Wind Profilers with Radio Acoustic Sounding Systems in the Cape Canaveral Air Station/Kennedy Space Center area to provide three-dimensional wind speed and direction and virtual temperature estimates in the boundary layer. The Applied Meteorology Unit, staffed by ENSCO, Inc., was tasked by the 45th Weather Squadron, the Spaceflight Meteorology Group, and the National Weather Service in Melbourne, Florida to investigate methods which will help forecasters assess profiler network data quality when developing forecasts and warnings for critical ground, launch and landing operations. Four routines were evaluated in this study: a consensus time period check a precipitation contamination check, a median filter, and the Weber-Wuertz (WW) algorithm. No routine was able to effectively flag suspect data when used by itself. Therefore, the routines were used in different combinations. An evaluation of all possible combinations revealed two that provided the best results. The precipitation contamination and consensus time routines were used in both combinations. The median filter or WW was used as the final routine in the combinations to flag all other suspect data points.

Lambert, Winifred C.↗

NASA NTRS1997

Gamma-Ray Bursts: Where are we Now?

There has been significant progress recently in our understanding of gamma-ray bursts. The long-sought counterparts at other wavelengths have finally been found for a few bursts. In one case, GRB970508, red-shifted absorption lines have been detected, finally settling the debate about the distance scale. The consensus is that the burst sources lie at cosmological distances, requiring at least about 10**51 ergs to be emitted in gamma rays in just a few seconds. Many mysteries remain. There is no consensus on the nature of the sources, although coalescing neutron stars are the leading candidate. I will describe recent GRB observations from a number of satellites, including the Compton Gamma Ray Observatory, the Hubble Space Telescope, and BeppoSAX, as well as ground-based optical and radio observations. I will relate these observations to our present picture of GRBs and describe how future observations might answer the remaining questions. Finally, I will describe how gamma-ray bursts may be able to tell us something about the early Universe.

Meegan, Charles A.↗