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All sourcesNASA NTRSDOE OSTI
NASA NTRS2017

Small Ion Channel Linking Molecular Simulations and Electrophysiology

Ion channels are pore-forming protein assemblies that mediate the transport of small ions across cell membranes. Otherwise, membrane bilayers would be almost impermeable to ions incapable to traverse the low dielectric constant, hydrophobic membrane core. Ion channels are ubiquitous to all life forms. In humans and other higher organisms they play the central role in conducting nerve impulses, cardiac functions, muscle contraction and apoptosis. On the other extreme of biological complexity, viral ion channels (viroporins) influence many stages of the virus infection cycle either through regulating virus replication, such as entry, assembly and release or modulating the electrochemical balance in the subcellular compartments of host cells. Ion channels were crucial components of protocells. Their emergence facilitated adaptation of nascent life to different environmental conditions. The earliest ion channels must have been much simpler than most of their modern ancestors. Viral channels are among only a few naturally occurring models to study the structure, function and evolution of primordial channels. Experimental studies of these properties are difficult and often unreliable. In principle, computational methods, and molecular dynamics (MD) simulations in particular, can aid in providing information about both the structure and the function of ion channels. However, MD suffers from its own problems, such as inability to access sufficiently long time scales or limited accuracy of force fields. It is, therefore, essential to determine the reliability of MD simulations. We propose to do so on the basis of two criteria. One is channel stability on time scales that extend for several microseconds or longer. The other is the ability to reproduce the measured ionic conductance as a function of applied voltage. If both the stability and the calculated ionic conductance are satisfactory it will greatly increase our confidence that the structure and the function of a channel are described sufficiently accurately. To our knowledge, long time scale stability (approx.10 micro-sec) and the correct electrophysiology have been shown so far for only one channel - the synthetic LS3 hexamer). In this presentation, this approach will be discussed in application to two viral channels - Vpu, encoded by the HIV-1 genome and p7 of hepatitis C.

Pohorille, Andrzej↗
NASA NTRS1996

Excitation and Evolution of Structure in Galaxies

Even casual examination shows that most disk galaxies are not truly symmetric but exhibit a variety of morphological peculiarities of which spiral arms and bars are the most pronounced. After decades of effort, we now know that these features may be driven by environmental disturbance acting directly on the disk, in addition to self-excitation of a local disturbance (e.g. by swing amplification). However, all disks are embedded within halos and therefore are not dynamically independent. Are halos susceptible to such disturbances as well? If so, can the affect disks and on what time scales? y Until recently, conventional wisdom was that halos acted to stabilize disks but otherwise remained relatively inert. The argument behind this assumption is as follows. Halos, spheroids and bulges are supported against their own gravity by the random motion of their stars, a so-called "hot" distribution. On all but the largest scales, they look like a nearly homogeneous thermal bath of stars. Because all self-sustaining patterns or waves in a homogeneous universe of stars with a Maxwellian velocity distribution are predicted to damp quickly (e.g. Ikeuchi et al. 1974), one expects that any pattern will be strongly damped in halos and spheroids as well. However, recent work suggests that halos do respond to tidal encounters by companions or cluster members and are susceptible to induction of long-lived modes.

Weinberg, Martin D.↗
NASA NTRS1978

Fission origin of the moon - Cause and timing

A new scenario is offered for the origin of the moon. It is assumed that the earth formed initially with about the maximum amount of angular momentum consistent with dynamical stability. This state is approximated by the secularly unstable Maclaurin spheroids (highly flattened hamburger-shaped bodies). It is shown that the earth cannot depart from this state at a reasonable rate as long as its viscosity is in the range of liquid rock. Since core formation supplies about 1600 kJ/kg, the earth will not leave this state until core formation is complete. When cooling produces a rise in viscosity, the earth will necessarily evolve along a path which is approximated by the Riemann ellipsoids (which have rapid internal motion). The evolution is toward a Jacobi ellipsoid, but it is intercepted by the development of a third-harmonic (pear-shaped) instability, which is catastrophic and leads to fission. The process of fission itself may be fundamentally analogous to the breaking of a wave in water. We cannot exclude the possibility that some other planets evolved similarly.

Okeefe, J. A.↗
NASA NTRS2026

Hybrid Modeling Study on Grain Evolution in the Metal Welding Process and Its Potential Lunar Application

Metal is most commonly used structural material in a wide range of spacecraft, and welding is the principal method for joining metal components into functional systems. However, conducting welding experiments under extreme environments—such as microgravity or vacuum conditions in space—is prohibitively expensive and experimentally challenging. To overcome these limitations, multi-physics computational welding models provide a cost-effective and versatile alternative. In this work, the authors have developed a coupled thermal (fluid) microstructure simulation framework to model metal welding under varying gravity conditions. The framework integrates a mixed-mode heat transfer formulation (conduction, convection, and radiation) with molten pool fluid dynamics, enabling accurate prediction of temperature fields and weld-pool geometry. A grain growth model is further incorporated to capture the spatial and temporal evolution of microstructure, including grain size distribution and morphological transitions during solidification. This approach provides detailed insight into molten pool evolution and grain-level microstructure development throughout the welding process. By explicitly parameterizing environmental conditions, the model supports extrapolation to off-Earth manufacturing scenarios such as welding on the lunar surface. Tantalum—chosen in this study due to its high melting point, oxidation resistance, and mechanical stability at elevated temperatures—serves as the material system for model demonstration. Beyond Tantalum, the integrated multi-physics framework offers broad applicability for predictive welding simulations of various structural and refractory metals or alloys used in extreme terrestrial or extraterrestrial environments.

kinetic Monte Carlo (SPPARKS)↗
NASA NTRS1980

Pointing and control for planetary spacecraft - The first twenty years

The evolution of guidance and control systems for United States planetary and unmanned lunar spacecraft over the last 20 years is traced. The characteristics of the guidance and control systems used on spacecraft from the Range lunar impactor to the planned Galileo Jupiter orbiter and entry probe are surveyed, with attention given to the uses of three-axis stabilized, spin-stabilized and dual-spin designs. System performance trends that have evolved to meet the increasing science and mission requirements of the spacecraft are considered in the areas of attitude references, control consumables, dynamics and system modeling, thrust vector control, optical navigation, manuever turns, maneuver velocity control, instrument pointing, and antenna pointing. Hardware trends in optical sensors, inertial sensors, processing electronics, electromechanical devices, and system testing and reliability are also reviewed. The achievements represented by these advances are emphasized, and it is predicted that future developments will be in the areas of increased control system autonomy and performance requirements.

Pace, G. D.↗
NASA NTRS2003

Extension of Liouville Formalism to Postinstability Dynamics

A mathematical formalism has been developed for predicting the postinstability motions of a dynamic system governed by a system of nonlinear equations and subject to initial conditions. Previously, there was no general method for prediction and mathematical modeling of postinstability behaviors (e.g., chaos and turbulence) in such a system. The formalism of nonlinear dynamics does not afford means to discriminate between stable and unstable motions: an additional stability analysis is necessary for such discrimination. However, an additional stability analysis does not suggest any modifications of a mathematical model that would enable the model to describe postinstability motions efficiently. The most important type of instability that necessitates a postinstability description is associated with positive Lyapunov exponents. Such an instability leads to exponential growth of small errors in initial conditions or, equivalently, exponential divergence of neighboring trajectories. The development of the present formalism was undertaken in an effort to remove positive Lyapunov exponents. The means chosen to accomplish this is coupling of the governing dynamical equations with the corresponding Liouville equation that describes the evolution of the flow of error probability. The underlying idea is to suppress the divergences of different trajectories that correspond to different initial conditions, without affecting a target trajectory, which is one that starts with prescribed initial conditions.

Zak, Michail↗
NASA NTRS2013

Evolution of the Shape of Detached GeSi Crystals in Microgravity

A series of GeSi crystal growth experiments are planned to be conducted in the Low Gradient Furnace (LGF) onboard the International Space Station. An objective of these experiments is to understand the mechanisms of detached Bridgman growth, a process in which a gap exists between the growing semiconductor crystal and the crucible wall. Crystals grown without wall contact have superior quality to otherwise similar crystals grown in direct contact with a container, especially with respect to impurity incorporation, formation of dislocations, and residual stress in crystals. Numerical calculations are used to determine the conditions in which a gap can exist. According to crystal shape stability theory, only some of these gap widths will be dynamically stable. Beginning with a crystal diameter that differs from stable conditions, the transient crystal growth process is analyzed. In microgravity, dynamic stability depends only on capillary effects and is decoupled from heat transfer. Depending on the initial conditions and growth parameters, the crystal shape will evolve towards the crucible wall, towards a stable gap width, or towards the center of the crucible, collapsing the meniscus.

Volz, M. P.↗
NASA NTRS2013

Evolution of the Shape of Detached GeSi Crystals in Microgravity

A series of GeSi crystal growth experiments are planned to be conducted in the Low Gradient Furnace (LGF) onboard the International Space Station. An objective of these experiments is to understand the mechanisms of detached Bridgman growth, a process in which a gap exists between the growing semiconductor crystal and the crucible wall. Crystals grown without wall contact have superior quality to otherwise similar crystals grown in direct contact with a container, especially with respect to impurity incorporation, formation of dislocations, and residual stress in crystals. Numerical calculations are used to determine the conditions in which a gap can exist. According to crystal shape stability theory, only some of these gap widths will be dynamically stable. Beginning with a crystal diameter that differs from stable conditions, the transient crystal growth process is analyzed. In microgravity, dynamic stability depends only on capillary effects and is decoupled from heat transfer. Depending on the initial conditions and growth parameters, the crystal shape will evolve towards the crucible wall, towards a stable gap width, or towards the center of the crucible, collapsing the meniscus.

Volz, M. P.↗
NASA NTRS2014

Future Antarctic Bed Topography and Its Implications for Ice Sheet Dynamics

The Antarctic bedrock is evolving as the solid Earth responds to the past and ongoing evolution of the ice sheet. A recently improved ice loading history suggests that the Antarctic Ice Sheet (AIS) has generally been losing its mass since the Last Glacial Maximum. In a sustained warming climate, the AIS is predicted to retreat at a greater pace, primarily via melting beneath the ice shelves.We employ the glacial isostatic adjustment (GIA) capability of the Ice Sheet System Model (ISSM) to combine these past and future ice loadings and provide the new solid Earth computations for the AIS.We find that past loading is relatively less important than future loading for the evolution of the future bed topography. Our computations predict that the West Antarctic Ice Sheet (WAIS) may uplift by a few meters and a few tens of meters at years AD 2100 and 2500, respectively, and that the East Antarctic Ice Sheet is likely to remain unchanged or subside minimally except around the Amery Ice Shelf. The Amundsen Sea Sector in particular is predicted to rise at the greatest rate; one hundred years of ice evolution in this region, for example, predicts that the coastline of Pine Island Bay will approach roughly 45mmyr−1 in viscoelastic vertical motion. Of particular importance, we systematically demonstrate that the effect of a pervasive and large GIA uplift in the WAIS is generally associated with the flattening of reverse bed slope, reduction of local sea depth, and thus the extension of grounding line (GL) towards the continental shelf. Using the 3-D higher-order ice flow capability of ISSM, such a migration of GL is shown to inhibit the ice flow. This negative feedback between the ice sheet and the solid Earth may promote stability in marine portions of the ice sheet in the future.

ice dynamics↗
NASA NTRS1989

Multi-objective/loading optimization for rotating composite flexbeams

With the evolution of advanced composites, the feasibility of designing bearingless rotor systems for high speed, demanding maneuver envelopes, and high aircraft gross weights has become a reality. These systems eliminate the need for hinges and heavily loaded bearings by incorporating a composite flexbeam structure which accommodates flapping, lead-lag, and feathering motions by bending and twisting while reacting full blade centrifugal force. The flight characteristics of a bearingless rotor system are largely dependent on hub design, and the principal element in this type of system is the composite flexbeam. As in any hub design, trade off studies must be performed in order to optimize performance, dynamics (stability), handling qualities, and stresses. However, since the flexbeam structure is the primary component which will determine the balance of these characteristics, its design and fabrication are not straightforward. It was concluded that: pitchcase and snubber damper representations are required in the flexbeam model for proper sizing resulting from dynamic requirements; optimization is necessary for flexbeam design, since it reduces the design iteration time and results in an improved design; and inclusion of multiple flight conditions and their corresponding fatigue allowables is necessary for the optimization procedure.

Hamilton, Brian K.↗
NASA NTRS1991

The dynamic instability of adiabatic blast waves

Adiabatic blastwaves, which have a total energy injected from the center E varies as t(sup q) and propagate through a preshock medium with a density rho(sub E) varies as r(sup -omega) are described by a family of similarity solutions. Previous work has shown that adiabatic blastwaves with increasing or constant postshock entropy behind the shock front are susceptible to an oscillatory instability, caused by the difference between the nature of the forces on the two sides of the dense shell behind the shock front. This instability sets in if the dense postshock layer is sufficiently thin. The stability of adiabatic blastwaves with a decreasing postshock entropy is considered. Such blastwaves, if they are decelerating, always have a region behind the shock front which is subject to convection. Some accelerating blastwaves also have such region, depending on the values of q, omega, and gamma where gamma is the adiabatic index. However, since the shock interface stabilizes dynamically induced perturbations, blastwaves become convectively unstable only if the convective zone is localized around the origin or a contact discontinuity far from the shock front. On the other hand, the contact discontinuity of accelerating blastwaves is subject to a strong Rayleigh-Taylor instability. The frequency spectra of the nonradial, normal modes of adiabatic blastwaves have been calculated. The results have been applied to the shocks propagating through supernovae envelopes. It is shown that the metal/He and He/H interfaces are strongly unstable against the Rayleigh-Taylor instability. This instability will induce mixing in supernovae envelopes. In addition the implications of this work for the evolution of planetary nebulae is discussed.

Ryu, Dongsu↗
NASA NTRS2015

Shape Evolution of Detached Bridgman Crystals Grown in Microgravity

Detached (or dewetted) Bridgman crystal growth defines that process in which a gap exists between a growing crystal and the crucible wall. In microgravity, the parameters that influence the existence of a stable gap are the growth angle of the solidifying crystal, the contact angle between the melt and the crucible wall, and the pressure difference across the meniscus. During actual crystal growth, the initial crystal radius will not have the precise value required for stable detached growth. Beginning with a crystal diameter that differs from stable conditions, numerical calculations are used to analyze the transient crystal growth process. Depending on the initial conditions and growth parameters, the crystal shape will either evolve towards attachment at the crucible wall, towards a stable gap width, or inwards towards eventual collapse of the meniscus. Dynamic growth stability is observed only when the sum of the growth and contact angles exceeds 180 degrees.

Volz, M. P.↗
NASA NTRS1982

The condensational instability in the solar transition region and corona

The stability of plasmas at temperatures and densities typical of the solar transition region and corona is investigated using both a linear analysis and nonlinear time-dependent numerical simulations. Growth rates, decay rates, and oscillation frequencies of the perturbations determined from the linear analysis are in excellent agreement with the simulations. The nonlinear regime is characterized by a bifurcation of the plasma into a cool dense condensation surrounded by a hot tenuous corona. The condensation may then be accelerated by forces in the plasma such as those arising from gravity or differential heating. Finally, the results of the detailed simulation show that the transition region is a dynamically stable structure which is the result of the nonlinear evolution of the condensational instability.

Oran, E. S.↗
NASA NTRS2007

NASA Tech Briefs, April 2007

Topics include: Wearable Environmental and Physiological Sensing Unit; Broadband Phase Retrieval for Image-Based Wavefront Sensing; Filter Function for Wavefront Sensing Over a Field of View; Iterative-Transform Phase Retrieval Using Adaptive Diversity; Wavefront Sensing With Switched Lenses for Defocus Diversity; Smooth Phase Interpolated Keying; Maintaining Stability During a Conducted-Ripple EMC Test; Photodiode Preamplifier for Laser Ranging With Weak Signals; Advanced High-Definition Video Cameras; Circuit for Full Charging of Series Lithium-Ion Cells; Analog Nonvolatile Computer Memory Circuits; JavaGenes Molecular Evolution; World Wind 3D Earth Viewing; Lithium Dinitramide as an Additive in Lithium Power Cells; Accounting for Uncertainties in Strengths of SiC MEMS Parts; Ion-Conducting Organic/Inorganic Polymers; MoO3 Cathodes for High-Temperature Lithium Thin-Film Cells; Counterrotating-Shoulder Mechanism for Friction Stir Welding; Strain Gauges Indicate Differential-CTE-Induced Failures; Antibodies Against Three Forms of Urokinase; Understanding and Counteracting Fatigue in Flight Crews; Active Correction of Aberrations of Low-Quality Telescope Optics; Dual-Beam Atom Laser Driven by Spinor Dynamics; Rugged, Tunable Extended-Cavity Diode Laser; Balloon for Long-Duration, High-Altitude Flight at Venus; and Wide-Temperature-Range Integrated Operational Amplifier.

Source record↗
NASA NTRS1994

Star cluster evolution with primordial binaries. 3: Effect of the Galactic tidal field

We present the results of N-body simulations of tidally limited star clusters with an initial population of 0%-20% binaries. We find that (1) if enough binaries are initially present, the binary fraction may fall to a minimum value, then increase at late times; (2) the cluster evaporation timescale is quite insensitive to the details of the initial binary distribution; (3) the cluster core radius stabilizes at a few percent of the half-mass radius when binaries are present, just as in the case of isolated clusters; and (4) there may be a marked difference between the spatial distribution of low-energy and high-energy binaries as the cluster evolves. Specifically, the spatial distribution of the lower energy systems is often substantially more extended than that of the more tightly bound pairs. At no time are our simulated clusters well described by simple dynamical models that neglect the close coupling between the binding energies and the center-of-mass energies of the binaries they contain.

Mcmillan, Steve↗
NASA NTRS1993

Effects of gas on the global stability of galactic disks - Radial flows

We study numerically the effect of gas on the global stability of a two-component self-gravitating galactic disk embedded in a live halo. The stars are evolved by using a 3D collisionless N-body code, and the gas is represented by an ensemble of finite size inelastic particles. The gravitational interaction of stars and gas is calculated using a TREE method. We find that the evolution of the gaseous distribution in the globally unstable disks can be described by two different regimes. When the gas mass fraction is less than about 10 percent, the gas is channeled toward the galactic center by a growing stellar bar. For higher gas fractions, the gas becomes highly inhomogeneous, and the bar instability in the disk is heavily damped. The gas falls toward the inner kpc due to dynamical friction. Domains of both regimes depend on the efficiency of dissipation in the gas. We also discuss the relevance of the Jeans instability and give an empirical criterion for the global bar instability in a two-component self-gravitating disk.

Shlosman, Isaac↗
NASA NTRS2000

A Comparison of the Automated Meteorological Profiling System High Resolution Flight Element to the Kennedy Space Center 50 MHz Doppler Wind Profiler

Wind profile measurement and the simulation of aerodynamic loads on a launch vehicle play an important role in determining launch capability and post launch assessment of the vehicle's performance. To date, all United States range certified wind profile measurement systems have been based on balloon tracking. Since the 1960's, the standard used by the National Aeronautics and Space Administration and the Air Force at the Cape Canaveral Air Station (CCAS) for detailed wind profile measurements has been the radar tracked, aerodynamically stabilized Jimsphere balloon system. Currently, the Air Force is nearing certification and operational implementation of the Automated Meteorological Profiling System (AMPS) at CCAS and Vandenburg Air Force Base (VAFB). AMPS uses the Global Positioning System for tracking the Jimsphere balloon. It is anticipated that the AMPS/Jimsphere, named the High Resolution Flight Element (HRFE), will have equivalent, or better resolution than the radar tracked Jimsphere, especially when the balloon is far downrange, at a low elevation angle. By the 1980's, the development of Doppler Wind Profilers (DWP) had become sufficiently advanced to justify an experimental measurement program at Kennedy Space Center (KSC). In 1989 a 50 MHz DWP was installed at KSC. In principal, the 50 MHz DWP has the capability to track the evolution of wind profile dynamics within 5 minutes of a launch. Because of fundamental differences in the measurement technique, there is a significant time and space differential between 50 MHz DWP and HRFE wind profiles. This paper describes a study to quantify these differences from a sample of 50 MHz DWP/HRFE pairs obtained during the AMPS certification test program.

Roberts, Barry C.↗
NASA NTRS2011

Stress-Driven Selection of Novel Phenotypes

A process has been developed that can confer novel properties, such as metal resistance, to a host bacterium. This same process can also be used to produce RNAs and peptides that have novel properties, such as the ability to bind particular compounds. It is inherent in the method that the peptide or RNA will behave as expected in the target organism. Plasmid-born mini-gene libraries coding for either a population of combinatorial peptides or stable, artificial RNAs carrying random inserts are produced. These libraries, which have no bias towards any biological function, are used to transform the organism of interest and to serve as an initial source of genetic variation for stress-driven evolution. The transformed bacteria are propagated under selective pressure in order to obtain variants with the desired properties. The process is highly distinct from in vitro methods because the variants are selected in the context of the cell while it is experiencing stress. Hence, the selected peptide or RNA will, by definition, work as expected in the target cell as the cell adapts to its presence during the selection process. Once the novel gene, which produces the sought phenotype, is obtained, it can be transferred to the main genome to increase the genetic stability in the organism. Alternatively, the cell line can be used to produce novel RNAs or peptides with selectable properties in large quantity for separate purposes. The system allows for easy, large-scale purification of the RNAs or peptide products. The process has been reduced to practice by imposing sub-inhibitory concentrations of NiCl2 on cells of the bacterium Escherichia coli that were transformed separately with the peptide library and RNA library. The evolved resistant clones were isolated, and sequences of the selected mini-gene variants were established. Clones resistant to NiCl2 were found to carry identical plasmid variants with a functional mini-gene that specifically conferred significant nickel tolerance on the host cells. Sequencing of the selected mini-gene revealed a propensity of the encoded peptide to bind transient metal ions. Expression of the mini-gene markedly improved growth parameters of the evolved clones at sub-inhibitory concentrations of NiCl2 while being slightly detrimental in the absence of stress. Similar results have been obtained with the RNA libraries. Overall, the results demonstrate a very natural outcome of the selection experiments in which the mini-genes were expected to be either successfully integrated into bacterial genetic networks, or rejected depending upon their effect on host fitness. This described approach can be useful as a laboratory model to study the dynamics of bacterial adaptive evolution on the molecular level. It can also provide a strategy for screening expressed DNA libraries in search of novel genes with desirable properties.

Fox, George E.↗