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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 109 records · Page 6
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Accelerating strain phenotyping with desorption electrospray ionization-imaging mass spectrometry and untargeted analysis of intact microbial colonies

Significance Synthetic biology has entered an era in which reading and writing DNA sequences are no longer rate-limiting steps in microbial strain engineering. Indeed, analytical methods measuring the resulting metabolic outcomes of specific gene edits have lagged behind the ability to generate new recombinant strains. Herein, we report a mass spectrometry strategy to accelerate these analytical workflows by directly analyzing metabolites and molecules produced from engineered microorganisms in a multiplexed process. Using untargeted acquisitions and unsupervised analytics, we assess the molecular features that change across discrete strains including primary target species, secondary products, and species outside the engineered fatty acid biosynthesis pathway.

09 BIOMASS FUELS↗
DOE OSTI2020

Combined computed tomography and position-resolved X-ray diffraction of an intact Roman-era Egyptian portrait mummy

Hawara Portrait Mummy 4, a Roman-era Egyptian portrait mummy, was studied with computed tomography (CT) and with CT-guided synchrotron X-ray diffraction mapping. These are the first X-ray diffraction results obtained non-invasively from objects within a mummy. The CT data showed human remains of a 5-year-old child, consistent with the female (but not the age) depicted on the portrait. Physical trauma was not evident in the skeleton. Diffraction at two different mummy-to-detector separations allowed volumetric mapping of features including wires and inclusions within the wrappings and the skull and femora. Additionally, the largest uncertainty in origin determination was approximately 1.5 mm along the X-ray beam direction, and diffraction- and CT-determined positions matched. Diffraction showed that the wires were a modern dual-phase steel and showed that the 7 × 5 × 3 mm inclusion ventral of the abdomen was calcite. Tracing the 00.2 and 00.4 carbonated apatite (bone's crystalline phase) reflections back to their origins produced cross-sectional maps of the skull and of femora; these maps agreed with transverse CT slices within approximately 1 mm. Coupling CT and position-resolved X-ray diffraction, therefore, offers considerable promise for non-invasive studies of mummies.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

SU-F-T-414: Mathematical Formulation of Gantry Starting Angle for Right Medial Tangential Arc in Left Intact Partial Breast Irradiation Using Volumetric Modulated Arc Therapy (VMAT)

Purpose: To choose appropriate gantry starting angle for partial left breast irradiation using volumetric modulated arc therapy (VMAT). Methods: A random patient of left breast carcinoma was selected for this study. The slice which was selected for this mathematical formulation was having maximum breast thickness and maximum medial and lateral tangential distance. After this appropriate isocenter was chosen on that CT slice. The distances between various points were measured by the measuring tool in Monaco 5.00.04. Using the various trigonometric equations, a final equation was derived which shows the relationship between Gantry start angle, isocenter Location and tissue thickness. Results: The final equation for gantry start for right medial tangential arc is given asStarting angle = 270°+tan^(−1)(sin(θ)/(x-1/x-2 +cosθ))The above equation was tested for 10 cases and it was found to be appropriate for all the cases. Conclusion: Gantry starting angle for partial arc irradiation depends upon Breast thickness, Distance between Medial and lateral tangent and isocenter location.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2023

Imaging Intact Filamentous Fungi from Spore to Hyphal Tip on the Nanoscale

Previously, the Pacific Northwest National Laboratory was limited by a 3-order of magnitude gap in resolution for direct 2-D and 3-D imaging of chemical, biological, energy and materials science systems. Our imaging instrumentation could directly visualize 3-D ultrastructure without labeling at resolutions less than 10-nanometers or greater than 10-micrometers. To address this gap, we procured and commissioned a Sigray NanoFast Bio-Lambda laboratory-based x-ray nanotomography system. This equipment provides the capability to image through tens of micrometers of organic materials at down to 35-nanometer resolution to bridge the nanoscale to the mesoscale for biological systems, organic polymers, environmental and particulate samples.

47 OTHER INSTRUMENTATION↗
DOE OSTI2018

Activation of intact bacteria and bacterial fragments mixed with agar as cloud droplets and ice crystals in cloud chamber experiments

Biological particles, including bacteria and bacterial fragments, have beenof much interest due to the special ability of some to nucleate ice atmodestly supercooled temperatures. This paper presents results from a recentstudy conducted on two strains of cultivated bacteria which suggest thatbacterial fragments mixed with agar, and not whole bacterial cells, serve ascloud condensation nuclei (CCN). Due to the absence of whole bacteria cellsin droplets, they are unable to serve as ice nucleating particles (INPs) inthe immersion mode under the experimental conditions. Experiments wereconducted at the Aerosol Interaction and Dynamics in the Atmosphere (AIDA)cloud chamber at the Karlsruhe Institute of Technology (KIT) by injectingbacteria-containing aerosol samples into the cloud chamber and inducing cloudformation by expansion over a temperature range of -5 to -12 ° C.Cloud droplets and ice crystals were sampled through a pumped counterflowvirtual impactor inlet (PCVI) and their residuals were characterized with asingle particle mass spectrometer (miniSPLAT). The size distribution of theoverall aerosol was bimodal, with a large particle mode composed of intactbacteria and a mode of smaller particles composed of bacterial fragmentsmixed with agar that were present in higher concentrations. Results fromthree expansions with two bacterial strains indicate that the cloud dropletresiduals had virtually the same size distribution as the smaller particlesize mode and had mass spectra that closely matched those of bacterialfragments mixed with agar. The characterization of ice residuals that weresampled through an ice-selecting PCVI (IS-PCVI) also shows that the sameparticles that activate to form cloud droplets, bacteria fragments mixed withagar, were the only particle type observed in ice residuals. These resultsindicate that the unavoidable presence of agar or other growth media inall laboratory studies conducted on cultivated bacteria can greatlyaffect the results and needs to be considered when interpreting CCN and INactivation data.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Integrated process for direct saccharification and dehydration of intact biomass to furfurals

A method of converting a lignocellulosic biomass to monosaccharides, and optionally further converting the monosaccharides to one or both of furfural and HMF, includes contacting the biomass with a reactive liquid phase comprising LiBr, H 2 SO 4 , and water, wherein H 2 SO 4 preferably constitutes at most 1.0 wt %, more preferably at most 0.5 wt %, and most preferably at most 0.1 wt % of the reactive liquid phase, and water preferably constitutes at most at most 60 wt %, more preferably at most 50 wt %, and most preferably at most 30 wt % of the reactive liquid phase.

09 BIOMASS FUELS↗
DOE OSTI2019

Infiltration Data Package for the E-Area Low-Level Waste Facility Performance Assessment

The infiltration data package contains the input parameters, the cap design and material properties assumptions, and the modeling results for the Hydrologic Evaluation of Landfill Performance (HELP) infiltration model simulations performed in support of the E-Area Low-Level Waste Facility Performance Assessment (PA). The infiltration estimates establish the upper boundary condition for the PORFLOW vadose-zone model and GoldSim model simulations for the following E-Area disposal unit types: Slit and Engineered Trenches, Low-Activity Waste Vault (LAWV), Intermediate-Level Vault (ILV), Componentin- Grout (CIG) special waste form trench segments, and the Naval Reactor Component Disposal Areas (NRCDAs). The infiltration data package builds upon relevant, foundational PA technical reports and memoranda from the past 15 years and is supported by three important components: the HELP model input parameter datasheets, HELP model input and output filenames and directory structure, and infiltration rates as a function of time for each scenario for each disposal unit type. For Slit and Engineered Trenches, a single best-estimate Bahia-grass case of two-percent slope and 585- foot slope length represents an upper bound on intact closure-cap infiltration rates over a 10,000-year period. Building upon the single, bounding, and intact case, two different approaches were considered for incorporating the effect of localized cap subsidence on infiltration rates in the PORFLOW flow and transport model simulations. In the first approach, a Monte Carlo probabilistic model was developed to calculate infiltration rates for 0.54%, 2%, 3.6%, and 4.9% subsidence scenariosa reflecting historical and future non-crushable content for the Slit and Engineered Trenches. The resulting blended (spatially and slope-length averaged) infiltration rates become an inflow upper boundary condition for the PORFLOW vadose zone model simulations. In the second and preferred approach, a Monte Carlo rectangle packing algorithm (Danielson, 2019) and a simplified equation for the total mass flux of water draining into a subsided compartment (Equation 1) will be employed to implement a weighted blending of radionuclide fluxes to the water table using the results of deterministic PORFLOW vadose zone simulations representative of specific subsidence cases. Finally, HELP-model results from sensitivity studies of the intact infiltration case were fit to a log-logistic function to generate infiltration profiles over a 10,000-year period for most-optimistic, more-optimistic, best-estimate, more-pessimistic, and most-pessimistic cases, for both the intact and four subsidence scenarios. For the LAWV and IL vaults, infiltration rate profiles for a 10,000-year period were developed for both an on-vault (above the concrete/metal vault roof) and an off-vault (10-foot soil zone adjacent to vault walls) scenario. The purpose of the off-vault simulations was to confirm that subsurface runoff from the concrete vault roof will adequately drain through the lowermost backfill layers adjacent to the vault walls. The LAWV and ILV infiltration profiles assume collapse of the concrete roof at relative Years 2,905 and 7,100, respectively. The identical Bahia-grass case with two-percent slope and 585-foot slope length assumed for the Slit and Engineered Trenches will represent an upper bound on intact infiltration rates for the NRCDAs and CIG special waste form as well. While the NRCDA casks are assumed to remain structurally intact (i.e., non-assumed to collapse 300 years after the end of operations. Because both rows of the existing CIG trench segments in ST23 (formerly CIG01) extend across the planned cap crest, the subsided CIG trench segments are treated conservatively in the HELP model as a 100%-subsidence case with zero subsurface run-on. The CIG special waste form trench segment infiltration profile, therefore, consists of an intact-cap period from relative Year 100 to Year 300, followed by a 100%-subsidence period from relative Year 300 to Year 10,100.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2025

Thermal stress in degraded forests in the Brazilian Amazon Arc of Deforestation

Understanding thermal stress in tropical forests has taken on new urgency in light of accelerating climate change and expansion of deforestation and forest degradation. Degraded tropical forests in particular may be approaching critical temperature thresholds even more rapidly than intact forests, with implications for tree survival and ecosystem recovery. We investigate thermal stress in degraded tropical forests within the Brazilian Amazon Arc of Deforestation. Using land surface temperature data from the ECOsystem Spaceborne Thermal Radiometer Experiment on the international Space Station (ECOSTRESS), we compared canopy temperatures of intact, selectively logged, and burned forests in Feliz Natal, Mato Grosso, Brazil. Upper canopy temperatures in previously burned forests were 4.1% higher (mean = 36.5 °C) and 50.9% more variable compared to intact and logged forests, which showed remarkably similar temperature distributions (means of 34.9 °C and 35.1 °C, respectively). Modeled leaf temperature distributions based on canopy temperature measurements from one of the warmest days in a 2 year dry season record indicated that 87% of leaves in the warmest burned forest patches exceeded the temperature threshold where respiration surpasses photosynthesis, compared to approximately 72%–74% in intact and logged forests, respectively, in the same time period. After controlling for environmental factors, burned forests were predicted to be 2.6 °C warmer on average [1.39 °C–3.96 °C, 95% credible interval] than intact forests across a 5–40 m canopy height range. Burned forests showed modest thermal recovery over time, with temperatures decreasing by approximately 1.2 °C over a 30 year recovery period. In contrast, logged forests showed minimal thermal differences from intact forests (−0.353 on average, [−1.125–0.274, 95% credible interval]) and negligible change (0.15 °C) over the same timeframe. While the absolute probabilities of exceeding damaging thermal thresholds remain low across all forest types under current climate conditions, the probability of leaves exceeding temperatures that cause permanent leaf damage was ten times higher in burned forests, with implications for the future of burned forest regeneration in water-limited regions of the Amazon basin. In particular, the combination of higher mean temperatures, greater temperature variability, and more frequent exposure to damaging thermal thresholds implies that burned tropical forests will experience substantially higher mortality rates and slower biomass recovery compared to intact and selectively logged forests, especially in water-limited regions where trees cannot rely on evaporative cooling to moderate canopy temperatures.

Brazilian Amazon Arc of Deforestation↗