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FLAMINGo: Few shot Learning Analysis of Multi-modal Inference Network Graphs
A multi-modal few-shot learning approach is used to identify similarities between particles obtained from environmental samples. The inferred similarities are then used in a similarity graph to identify groupings and outliers in the sample
CrossMP: Enabling Cross-Modality Translation between Single-Cell RNA-Seq and Single-Cell ATAC-Seq through Web-Based Portal
In recent years, there has been a growing interest in profiling multiomic modalities within individual cells simultaneously. One such example is integrating combined single-cell RNA sequencing (scRNA-seq) data and single-cell transposase-accessible chromatin sequencing (scATAC-seq) data. Integrated analysis of diverse modalities has helped researchers make more accurate predictions and gain a more comprehensive understanding than with single-modality analysis. However, generating such multimodal data is technically challenging and expensive, leading to limited availability of single-cell co-assay data. Here, we propose a model for cross-modal prediction between the transcriptome and chromatin profiles in single cells. Our model is based on a deep neural network architecture that learns the latent representations from the source modality and then predicts the target modality. It demonstrates reliable performance in accurately translating between these modalities across multiple paired human scATAC-seq and scRNA-seq datasets. Additionally, we developed CrossMP, a web-based portal allowing researchers to upload their single-cell modality data through an interactive web interface and predict the other type of modality data, using high-performance computing resources plugged at the backend.
Web-based wide-area monitoring platform for ringdown and clustering analytics in power systems
This paper introduces an open-source research platform for monitoring the Mexican interconnected power grid, allowing real-time processing and information extraction of the grid’s dynamic condition. Moreover, the platform is a Python-based development that embeds different ringdown and clustering analytics tools. In the case of ringdown analysis, the modal information can be extracted using some of the most known algorithms, i.e., Prony analysis, eigensystem realization algorithm (ERA), and matrix pencil (MP). For clustering analysis, the coherent behaviour of generator and non-generator buses is provided by applying recent state-of-the-art techniques such as affinity propagation, K-means, hierarchical agglomerative clustering, and typicality data analysis. The results of up to 93 PMUs show that this open-source platform suits researchers’ and engineers’ power system dynamic analysis requirements.
Optimal measurement point selection for resonant ultrasound spectroscopy of complex-shaped specimens using principal component analysis
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Data-Driven Interarea Oscillation Analysis for a 100% IBR-Penetrated Power Grid
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Comparative Small-Signal Stability Analysis of Grid-Forming and Grid-Following Inverters in Low-Inertia Power Systems: Preprint
Inverter-based resources (IBRs) are gradually replacing conventional fossil energy in modern power systems, which could make the system susceptible due to insufficient inertia, especially when moving towards a 100% inverter-based power grid. Grid-forming (GFM) and grid-following (GFL) controls are two common inverter control algorithms. However, the corresponding stability issues along with a comparative study on low-inertia power systems should still be investigated. This paper focuses on small-signal stability and conducts a comprehensive analysis of GFM and GFL controls, with emphases on the interactions between synchronous generators and IBRs. The detailed modeling of GFM and GFL inverters, and synchronous generators (SGs) are established. The coupling mechanism of IBRs and SGs is then conducted through participation factor analysis. The impacts of critical parameters on system stability are finally identified. The theoretical analyses are validated through time-domain simulation in MATLAB/Simulink.
The influence of irregular terrain on infrasonic propagation in the troposphere
The relations describing the reflection of three-dimensional acoustic ray paths impinging on a non-flat surface are derived and used to approximate the propagation of infrasonic signals over irregular terrain in the geometric limit. The influence of non-flat ground is strongest for those paths that reflect off the surface multiple times, such as those in the tropospheric waveguide; however, notable differences in source and receiver elevations for stratospheric and thermospheric paths can produce notable differences in travel times and arrival amplitudes. The interaction of ray paths with topographical features is investigated using a simple hill to demonstrate the impact of topography on propagation within an azimuthal plane, as well as cases in which the ground surface interaction deflects the path out of the azimuthal plane. Finally, broadband waveform predictions are compared with observations for an event in the western U.S., and a statistical analysis of scattering losses due to interaction with topography in the limit of geometric acoustics is used to improve the agreement between predicted and observed infrasonic signals.
Impact of Increased Inverter-Based Resources on Power System Small-Signal Stability
The transformation of the power system to include more distributed energy resources (DER) implies an increase in the number of inverter-based resources deployed on the grid. Envisioning future scenarios, this paper presents a small-signal stability analysis for a power grid comprising synchronous generators and inverter-based resources. Three types of inverter control are considered: grid following, droop-controlled grid forming, and virtual oscillator control grid forming. Although small-signal stability of power systems is a widely studied topic, systematic analysis of mixed machine-inverter systems with detailed control models at various inverter levels are limited. This paper addresses the gap with numerical simulations tailored to the IEEE 39-bus system. Results show the system may become unstable at high inverter level of grid-following inverters, and grid-forming inverter control can potentially improve system stability, thereby enabling very high level of DERs.
Impact of Increased Inverter Penetration on Power System Small-Signal Stability: Preprint
The transformation of the power system to include more distributed energy resources (DER) implies an increase in the number of inverter-based resources deployed on the grid. Envisioning future scenarios, this paper presents a small-signal stability analysis for a power grid comprising synchronous generators and inverter-based resources. Three types of inverter control are considered: grid following, droop-controlled grid forming, and virtual oscillator control grid forming. Although small-signal stability of power systems is a widely studied topic, systematic analysis of mixed machine-inverter systems with detailed control models at various inverter penetration levels are limited. This paper addresses the gap with numerical simulations tailored to the IEEE 39-bus system. Results show the system may become unstable at high inverter penetration level of grid-following inverters, and grid-forming inverter control can potentially improve system stability, thereby enabling very high level of DERs.
Assessment of task‐based performance from five clinical DBT systems using an anthropomorphic breast phantom
Purpose Digital breast tomosynthesis (DBT) is a limited‐angle tomographic breast imaging modality that can be used for breast cancer screening in conjunction with full‐field digital mammography (FFDM) or synthetic mammography (SM). Currently, there are five commercial DBT systems that have been approved by the U.S. FDA for breast cancer screening, all varying greatly in design and imaging protocol. Because the systems are different in technical specifications, there is a need for a quantitative approach for assessing them. In this study, the DBT systems are assessed using a novel methodology with an inkjet‐printed anthropomorphic phantom and four alternative forced choice (4AFC) study scheme. Method A breast phantom was fabricated using inkjet printing and parchment paper. The phantom contained 5‐mm spiculated masses fabricated with potassium iodide (KI)‐doped ink and microcalcifications (MCs) made with calcium hydroxyapatite. Images of the phantom were acquired on all five systems with DBT, FFDM, and SM modalities where available using beam settings under automatic exposure control. A 4AFC study was conducted to assess reader performance with each signal under each modality. Statistical analysis was performed on the data to determine proportion correct (PC), standard deviations, and levels of significance. Results For masses, overall detection was highest with DBT. The difference in PC was statistically significant between DBT and SM for most systems. A relationship was observed between increasing PC and greater gantry span. For MCs, performance was highest with DBT and FFDM compared to SM. The difference between PC of DBT and PC of SM was statistically significant for all manufacturers. Conclusions This methodology represents a novel approach for evaluating systems. This study is the first of its kind to use an inkjet‐printed anthropomorphic phantom with realistic signals to assess performance of clinical DBT imaging systems.
L-PBF High-Throughput Data Pipeline Approach for Multi-modal Integration
Abstract Metal-based additive manufacturing requires active monitoring solutions for assessing part quality. Multiple sensors and data streams, however, generate large heterogeneous data sets that are impractical for manual assessment and characterization. In this work, an automated pipeline is developed that enables feature extraction from high-speed camera video and multi-modal data analysis. The framework removes the need for manual assessment through the utilization of deep learning techniques and training models in a weakly supervised paradigm. We demonstrate this pipeline’s capability over 700,000 high-speed camera frames. The pipeline successfully extracts melt pool and spatter geometries and links them to corresponding pyrometry, radiography, and processparameter information. 715 individual prints are examined to reveal melt pool areas that exceeds 0.07 mm 2 and pyrometry signal over a threshold (375 pyrometry units) were more likely to have defects. These automated processes enable massive throughput of characterization techniques.
Impacts of swinging door lossy compression of synchrophasor data
As the number of operational Phasor Measurement Units (PMUs) is increasing, compression is becoming crucial for efficiently transferring and storing enormous amount of synchrophasor data continuously measured from a power system. Some utilities in the U.S. have already adopted a nonlinear compression technique, called Swinging Door Algorithm (SDA), assuming compressed data meets technical and regulatory requirements without resulting in any degradation of the measurements. This paper studies impacts of this compression algorithm on field measured and simulated PMU data, and presents results from spectral analyses of raw and decompressed measurements. The results show blind application of the SDA compression alters frequency content in the measurements and introduces false harmonics and aliasing. These can lead to false conclusions being drawn from the measurements about the power system condition.
Affinity propagation clustering of full-field, high-spatial-dimensional measurements for robust output-only modal identification: A proof-of-concept study
Determination of the model order is a challenging problem in system identification, especially in output-only or operational modal identification where some modes are weakly excited. While existing methods such as the stabilization diagram method (spectral information) are effective, they do not scale to high-dimensional data, which is usually needed for high-fidelity characterization of structural dynamics and has been made available in the emerging full-field measurement techniques using optical methods such as photogrammetry and laser vibrometers. In this proof-of-concept study we present a new non-parametric, data-driven approach for robust output-only identification of high-spatial-dimensional modal parameters of basic structures by efficiently processing and interactively exploiting the full-field measurement (i.e., very dense spatial measurement points). Specifically, we first over-estimate the system model once, producing a pool of candidate modes associated with their modal frequencies and full-field, high-spatial-dimensional mode shapes. This is accomplished by a data-driven method termed affinity propagation clustering (APC), where the active clusters, which are the active modes in our formulations, emerge from the "message-passing" procedure and does not require a pre-determination of the cluster number (mode or model order). Next, rather than using the spectral information to distinguish the physical and spurious modes in the stabilization diagram method, we exploit and visualize the spatial, full-field mode shape associated with each candidate mode to do so. We conduct extensive experiments on basic structural models with comparisons to a few existing methods. The results indicate that the new method is computationally efficient for identifying high-spatial-dimensional modal parameters, and robust to identify weak modes by exploiting the full-field measurement. We also discuss its applicability and limitations for structures with complex geometry (shapes).
Magnetic flux noise in superconducting qubits and the gap states continuum
In the present study we investigate the selected local aspects of the metal-induced gap states (MIGSs) at the disordered metal–insulator interface, that were previously proposed to produce magnetic moments responsible for the magnetic flux noise in some of the superconducting qubit modalities. Our analysis attempts to supplement the available studies and provide new theoretical contribution toward their validation. In particular, we explicitly discuss the behavior of the MIGSs in the momentum space as a function of the onsite energy deviation, that mimics random potential disorder at the interface in the local approximation. It is found, that when the difference between the characteristic electronic potentials in the insulator increases, the corresponding MIGSs become more localized. This effect is associated with the increasing degree of the potential disorder that was earlier observed to produce highly localized MIGSs in the superconducting qubits. At the same time, the presented findings show that the disorder-induced localization of the MIGSs can be related directly to the decay characteristics of these states as well as to the bulk electronic properties of the insulator. As a result, our study reinforces plausibility of the previous corresponding investigations on the origin of the flux noise, but also allows to draw future directions toward their better verification.
Dynamic Mode Decomposition of Random Pressure Fields over Bluff Bodies
Fluctuating surface pressures on a bluff body exposed to a boundary layer flow generally are characterized as a spatiotemporally varying random field. In this paper, a dynamic mode decomposition (DMD) was applied to extract dominant features embedded in these random pressure fields. Utilizing an unsupervised machine learning algorithm, spatial modes and their temporal variations were grouped into different clusters at scales, e.g., macro, meso, and micro. A proper orthogonal decomposition (POD) of the experimental data was carried out to observe commonalities and distinctive perspectives each decomposition offers. Here, a comprehensive examination of the DMD/POD for their convergence criteria, data sufficiency, and modal components analysis was conducted. The physical interpretation of the spatiotemporal pressure field based on these decomposition schemes was discussed. At different scales, the DMD modes can capture the evolution of aerodynamic features, e.g., convection of vortices (or vortex tubes) and other structures. The distribution of energy among these three broad scales also reflects an energy cascade in pressure fluctuations akin to turbulence.
Efficient Streaming Dynamic Mode Decomposition
We propose a reformulation of the streaming dynamic mode decomposition method that requires maintaining a single orthonormal basis, thereby reducing computational redundancy. The proposed efficient streaming dynamic mode decomposition method results in a constant-factor reduction in computational complexity and memory storage requirements. Numerical experiments on representative canonical dynamical systems show that the enhanced computational efficiency does not compromise the accuracy of the proposed method.
A Cyber Threat Mitigation Approach For Wide Area Control of SVCs using Stability Monitoring
We propose a stability monitoring approach for the mitigation of cyber threats directed at the wide area control (WAC) system used for coordinated control of Flexible AC Transmission Systems (FACTS) used for power oscillation damping (POD) of active power flow on inter-area tie lines. The approach involves monitoring the modes of the active power oscillation on an inter-area tie line using the Matrix Pencil (MP) method. We use the stability characteristics of the observed modes as a proxy for the presence of destabilizing cyber threats. We monitor the system modes to determine whether any destabilizing modes appear after the WAC system engages to control the POD. If the WAC signal exacerbates the POD performance, the FACTS falls back to POD using local measurements. The proposed approach does not require an expansive system-wide view of the network. We simulate replay, control integrity, and timing attacks for a test system and present results that demonstrate the performance of the SM approach for mitigation.