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Interrelationship between Lab, Space, Astrophysical, Magnetic Fusion, and Inertial Fusion Plasma Experiments (Graduate support for DIII-D Frontier Science Experiments)
The project, to explore the use of the DIII-D facility to investigate questions of value to discovery plasma science and provide a deepened scientific understanding behind basic plasma processes that are outside of the fusion-energy-science research line, began in September 2016 when five discovery-plasma physicists were contacted by General Atomics to form a Frontier Science Experiments (FSE) panel for brainstorming and for implementing the FSE campaign at the DIII-D National Fusion Facility. After advertising the FSE opportunity at the annual plasma physics conference, the panel grew to include six others. By January 2017, the panel for reviewing and ranking proposals was established. Evaluation of FY2017 proposals took place in February 2017. Evaluation of FY2018 proposals took place in January 2018. This proposal began 15 August 2017 and funded two research assistantships for three students who interacted, gained expertise in experimental and computational physics, and shared responsibilities on the following projects within the DIII-D (non-fusion) Frontier Science Experiments (FSE) campaign: (1) "Impact of Magnetic Perturbations on Turbulence - Zonal Flow Interactions and Saturation", (2) "Nonlinear Processes during Toroidal Alfvén Mode-Mode Interaction", (3) "Self-Consistent Chaos in Magnetic Field Dynamics", (4) “Nonmodal Decomposition of Turbulence”, and (5) “Multi-harmonic EMIC Emission -- Species mix and distribution function dependence of instabilities near the ion-cyclotron frequency”. The outcome was a fraction of one doctoral dissertation and the entirety of one master of science thesis. The work took advantage of the unique capabilities of the DIII-D National Fusion Facility to serve as the first phase of the Frontier Science Experiment (FSE) campaign, an innovative concept aiming to advance fundamental understanding in 3 key general plasma science areas - particle acceleration and energetic particles in plasmas, turbulence and transport in plasmas, and nonlinear waves and processes – all at discovery’s cutting edge.
N-body simulations for coupled scalar-field cosmology
We describe in detail the general methodology and numerical implementation of consistent N-body simulations for coupled-scalar-field models, including background cosmology and the generation of initial conditions (with the different couplings to different matter species taken into account). We perform fully consistent simulations for a class of coupled-scalar-field models with an inverse power-law potential and negative coupling constant, for which the chameleon mechanism does not work. We find that in such cosmological models the scalar-field potential plays a negligible role except in the background expansion, and the fifth force that is produced is proportional to gravity in magnitude, justifying the use of a rescaled gravitational constant G in some earlier N-body simulation works for similar models. We then study the effects of the scalar coupling on the nonlinear matter power spectra and compare with linear perturbation calculations to see the agreement and places where the nonlinear treatment deviates from the linear approximation. We also propose an algorithm to identify gravitationally virialized matter halos, trying to take account of the fact that the virialization itself is also modified by the scalar-field coupling. We use the algorithm to measure the mass function and study the properties of dark-matter halos. We find that the net effect of the scalar coupling helps produce more heavy halos in our simulation boxes and suppresses the inner (but not the outer) density profile of halos compared with the {Lambda}CDM prediction, while the suppression weakens as the coupling between the scalar field and dark-matter particles increases in strength.
Three-dimensional continuum point cloud method for large deformation and its verification
This study presents a strong form based meshfree collocation method, which is named Continuum Point Cloud Method, to solve nonlinear field equations derived from classical mechanics for deformed bodies in three-dimensional Euclidean space. The method and its implementation are benchmarked against a nonlinear vector field using manufactured solutions. The analysis of mechanical fields firstly focuses on the study of St. Venant Kirchhoff and compressible neo-Hookean materials. Results for various initial boundary value problems are presented, including benchmark cases involving unidirectional tension and simple shear. Subsequently, the study concludes with an analysis of a displacement-controlled simulation of a compressible neo-Hookean material, specifically a bar that is pulled to 50% of its original length and rotated 90°. The pure tension case yields a 1.5% error in displacement between computed and expected values and a combined tension and torsion loading case provides further insight into material behavior under complex loading conditions. The resulting normal axial and transverse stress-strain curves are also presented. Lastly, the consistency and robustness of the proposed nonlinear numerical schemes are successfully demonstrated through various numerical experiments.
Auxetic metamaterials from disordered networks
Recent theoretical work suggests that systematic pruning of disordered networks consisting of nodes connected by springs can lead to materials that exhibit a host of unusual mechanical properties. In particular, global properties such as Poisson's ratio or local responses related to deformation can be precisely altered. Tunable mechanical responses would be useful in areas ranging from impact mitigation to robotics and, more generally, for creation of metamaterials with engineered properties. However, experimental attempts to create auxetic materials based on pruningbased theoretical ideas have not been successful. In this study, we introduce a more realistic model of the networks, which incorporates angle-bending forces and the appropriate experimental boundary conditions. A sequential pruning strategy of select bonds in this model is then devised and implemented that enables engineering of specific mechanical behaviors upon deformation, both in the linear and in the nonlinear regimes. In particular, it is shown that Poisson's ratio can be tuned to arbitrary values. The model and concepts discussed here are validated by preparing physical realizations of the networks designed in this manner, which are produced by laser cutting 2D sheets and are found to behave as predicted. Furthermore, by relying on optimization algorithms, we exploit the networks' susceptibility to tuning to design networks that possess a distribution of stiffer and more compliant bonds and whose auxetic behavior is even greater than that of homogeneous networks. Finally, taken together, the findings reported here serve to establish that pruned networks represent a promising platform for the creation of unique mechanical metamaterials.
Analysis of DESI × DES using the Lagrangian effective theory of LSS
In this work we use Lagrangian perturbation theory to analyze the harmonic space galaxy clustering signal of the Bright Galaxy Survey (BGS) and luminous red galaxies (LRGs) targeted by the dark energy spectroscopic instrument (DESI), combined with the galaxy-galaxy lensing signal measured around these galaxies using Dark Energy Survey Year 3 source galaxies. The BGS and LRG galaxies are extremely well characterized by DESI spectroscopy and, as a result, lens galaxy redshift uncertainty and photometric systematics contribute negligibly to the error budget of our “2 × 2-point” analysis. On the modeling side, this work represents the first application of the SPINOSAURUS code, implementing an effective field theory model for galaxy intrinsic alignments, and we additionally introduce a new scheme ( MAIAR ) for marginalizing over the large uncertainties in the redshift evolution of the intrinsic alignment signal. Furthermore, this is the first application of a hybrid effective field theory model for galaxy bias based on the A emulus 𝜈 simulations. Our main result is a measurement of the amplitude of the lensing signal, 𝑆 8 = 𝜎 8 (Ω 𝑚 /0.3) 0.5 = 0.850$^{+0.042}_{−0.050}$, consistent with values of this parameter derived from the primary cosmic microwave background. This constraint is artificially improved by a factor of 51% if we assume a more standard, but restrictive parametrization for the redshift evolution and sample dependence of the intrinsic alignment signal, and 63% if we additionally assume the nonlinear alignment model. Furthermore, we show that when fixing the cosmological model to the best-fit values from Planck PR4 there is > 5𝜎 evidence for a deviation of the evolution of the intrinsic alignment signal from the functional form that is usually assumed in cosmic shear and galaxy-galaxy lensing studies.
Intrinsic nonlocality of spin- and polarization-resolved probabilities in strong-field quantum electrodynamics
Spin and polarization are central to precision tests of fundamental physics and for interpreting radiation from astrophysical sources and ultraintense laser-matter experiments. Here, focusing on the fundamental process of nonlinear Compton scattering, we demonstrate that a key assumption underlying current strong-field quantum electrodynamics models, i.e., that emission can be treated as an instantaneous random event sampled from a local differential rate, is inconsistent once emission angles, electron spin, and/or photon polarization are resolved. Namely, even in strictly constant and uniform fields , the resulting fully differential distribution is sign indefinite, yielding negative inferred probabilities. The physical reason is that the photon emission probability builds up over a finite length of the electron trajectory, the formation region, during which the electron direction changes by roughly the same small angle that defines the radiation cone. Therefore, we put forward a new method where we integrate over this formation region analytically to obtain a physically consistent electron spin and photon polarization model. We show that the implementation of our model is compatible with existing Monte Carlo and particle-in-cell workflows. Simulations of a GeV-class electron-laser collision accessible at current petawatt facilities and of emission in a pulsarlike magnetic field are shown to reveal spin and polarization patterns that differ even qualitatively from state-of-the-art local models. In particular, our new model predicts substantial angle-dependent circular photon polarization where the well-known collinear-emission approach yields none, and a pronounced helicity bias in the recoiling electrons absent from current predictions. These findings have direct implications for upcoming strong-field QED experiments and for interpreting polarized radiation from extreme astrophysical environments.
Neutrinos in N -body simulations
In the next decade, cosmological surveys will have the statistical power to detect the absolute neutrino mass scale. N-body simulations of large-scale structure formation play a central role in interpreting data from such surveys. Yet these simulations are Newtonian in nature. We provide a quantitative study of the limitations to treating neutrinos, implemented as N-body particles, in N-body codes, focusing on the error introduced by neglecting special relativistic effects. Special relativistic effects are potentially important due to the large thermal velocities of neutrino particles in the simulation box. We derive a self-consistent theory of linear perturbations in Newtonian and nonrelativistic neutrinos and use this to demonstrate that N-body simulations overestimate the neutrino free-streaming scale, and cause errors in the matter power spectrum that depend on the initial redshift of the simulations. For z i ≲ 100, and neutrino masses within the currently allowed range, this error is ≲ 0.5%, though represents an up to ~10 % correction to the shape of the neutrino-induced suppression to the cold dark matter power spectrum. Here, we argue that the simulations accurately model nonlinear clustering of neutrinos so that the error is confined to linear scales.
Development of a GPU-based high-performance radiative transfer model for the Infrared Atmospheric Sounding Interferometer (IASI)
Satellite-observed radiance is a nonlinear functional of surface properties and atmospheric temperature and absorbing gas profiles as described by the radiative transfer equation (RTE). In the era of hyperspectral sounders with thousands of high-resolution channels, the computation of the radiative transfer model becomes more time-consuming. The radiative transfer model performance in operational numerical weather prediction systems still limits the number of channels we can use in hyperspectral sounders to only a few hundreds. To take the full advantage of such high-resolution infrared observations, a computationally efficient radiative transfer model is needed to facilitate satellite data assimilation. In recent years the programmable commodity graphics processing unit (GPU) has evolved into a highly parallel, multi-threaded, many-core processor with tremendous computational speed and very high memory bandwidth. The radiative transfer model is very suitable for the GPU implementation to take advantage of the hardware's efficiency and parallelism where radiances of many channels can be calculated in parallel in GPUs. In this paper, we develop a GPU-based high-performance radiative transfer model for the Infrared Atmospheric Sounding Interferometer (IASI) launched in 2006 onboard the first European meteorological polar-orbiting satellites, METOP-A. Each IASI spectrum has 8461 spectral channels. The IASI radiative transfer model consists of three modules. The first module for computing the regression predictors takes less than 0.004% of CPU time, while the second module for transmittance computation and the third module for radiance computation take approximately 92.5% and 7.5%, respectively. Our GPU-based IASI radiative transfer model is developed to run on a low-cost personal supercomputer with four GPUs with total 960 compute cores, delivering near 4 TFlops theoretical peak performance. By massively parallelizing the second and third modules, we reached 364x speedup for 1 GPU and 1455x speedup for all 4 GPUs, both with respect to the original CPU-based single-threaded Fortran code with the -O{sub 2} compiling optimization. The significant 1455x speedup using a computer with four GPUs means that the proposed GPU-based high-performance forward model is able to compute one day's amount of 1,296,000 IASI spectra within nearly 10 min, whereas the original single CPU-based version will impractically take more than 10 days. This model runs over 80% of the theoretical memory bandwidth with asynchronous data transfer. A novel CPU-GPU pipeline implementation of the IASI radiative transfer model is proposed. The GPU-based high-performance IASI radiative transfer model is suitable for the assimilation of the IASI radiance observations into the operational numerical weather forecast model.
HOOKED FLARE RIBBONS AND FLUX-ROPE-RELATED QSL FOOTPRINTS
We studied the magnetic topology of active region 12158 on 2014 September 10 and compared it with the observations before and early in the flare that begins at 17:21 UT (SOL2014-09-10T17:45:00). Our results show that the sigmoidal structure and flare ribbons of this active region observed by the Solar Dynamics Observatory /Atmospheric Imaging Assembly can be well reproduced from a Grad–Rubin nonlinear force-free field extrapolation method. Various inverse-S- and inverse-J-shaped magnetic field lines, which surround a coronal flux rope, coincide with the sigmoid as observed in different extreme-ultraviolet wavelengths, including its multithreaded curved ends. Also, the observed distribution of surface currents in the magnetic polarity where it was not prescribed is well reproduced. This validates our numerical implementation and setup of the Grad–Rubin method. The modeled double inverse-J-shaped quasi-separatrix layer (QSL) footprints match the observed flare ribbons during the rising phase of the flare, including their hooked parts. The spiral-like shape of the latter may be related to a complex pre-eruptive flux rope with more than one turn of twist, as obtained in the model. These ribbon-associated flux-rope QSL footprints are consistent with the new standard flare model in 3D, with the presence of a hyperbolic flux tube located below an inverse-teardrop-shaped coronal QSL. This is a new step forward forecasting the locations of reconnection and ribbons in solar flares and the geometrical properties of eruptive flux ropes.
Image-based spectral distortion correction for photon-counting x-ray detectors
Purpose: To investigate the feasibility of using an image-based method to correct for distortions induced by various artifacts in the x-ray spectrum recorded with photon-counting detectors for their application in breast computed tomography (CT). Methods: The polyenergetic incident spectrum was simulated with the tungsten anode spectral model using the interpolating polynomials (TASMIP) code and carefully calibrated to match the x-ray tube in this study. Experiments were performed on a Cadmium-Zinc-Telluride (CZT) photon-counting detector with five energy thresholds. Energy bins were adjusted to evenly distribute the recorded counts above the noise floor. BR12 phantoms of various thicknesses were used for calibration. A nonlinear function was selected to fit the count correlation between the simulated and the measured spectra in the calibration process. To evaluate the proposed spectral distortion correction method, an empirical fitting derived from the calibration process was applied on the raw images recorded for polymethyl methacrylate (PMMA) phantoms of 8.7, 48.8, and 100.0 mm. Both the corrected counts and the effective attenuation coefficient were compared to the simulated values for each of the five energy bins. The feasibility of applying the proposed method to quantitative material decomposition was tested using a dual-energy imaging technique with a three-material phantom that consisted of water, lipid, and protein. The performance of the spectral distortion correction method was quantified using the relative root-mean-square (RMS) error with respect to the expected values from simulations or areal analysis of the decomposition phantom. Results: The implementation of the proposed method reduced the relative RMS error of the output counts in the five energy bins with respect to the simulated incident counts from 23.0%, 33.0%, and 54.0% to 1.2%, 1.8%, and 7.7% for 8.7, 48.8, and 100.0 mm PMMA phantoms, respectively. The accuracy of the effective attenuation coefficient of PMMA estimate was also improved with the proposed spectral distortion correction. Finally, the relative RMS error of water, lipid, and protein decompositions in dual-energy imaging was significantly reduced from 53.4% to 6.8% after correction was applied. Conclusions: The study demonstrated that dramatic distortions in the recorded raw image yielded from a photon-counting detector could be expected, which presents great challenges for applying the quantitative material decomposition method in spectral CT. The proposed semi-empirical correction method can effectively reduce these errors caused by various artifacts, including pulse pileup and charge sharing effects. Furthermore, rather than detector-specific simulation packages, the method requires a relatively simple calibration process and knowledge about the incident spectrum. Therefore, it may be used as a generalized procedure for the spectral distortion correction of different photon-counting detectors in clinical breast CT systems.
Numerical approximations for the molecular beam epitaxial growth model based on the invariant energy quadratization method
The Molecular Beam Epitaxial model is derived from the variation of a free energy, that consists of either a fourth order Ginzburg–Landau double well potential or a nonlinear logarithmic potential in terms of the gradient of a height function. One challenge in solving the MBE model numerically is how to develop proper temporal discretization for the nonlinear terms in order to preserve energy stability at the time-discrete level. In this paper, we resolve this issue by developing a first and second order time-stepping scheme based on the “Invariant Energy Quadratization” (IEQ) method. The novelty is that all nonlinear terms are treated semi-explicitly, and the resulted semi-discrete equations form a linear system at each time step. Moreover, the linear operator is symmetric positive definite and thus can be solved efficiently. We then prove that all proposed schemes are unconditionally energy stable. The semi-discrete schemes are further discretized in space using finite difference methods and implemented on GPUs for high-performance computing. Various 2D and 3D numerical examples are presented to demonstrate stability and accuracy of the proposed schemes.
Assessment and characterization of the total geometric uncertainty in Gamma Knife radiosurgery using polymer gels
Purpose: This work proposes and implements an experimental methodology, based on polymer gels, for assessing the total geometric uncertainty and characterizing its contributors in Gamma Knife (GK) radiosurgery. Methods: A treatment plan consisting of 26, 4-mm GK single shot dose distributions, covering an extended region of the Leksell stereotactic space, was prepared and delivered to a polymer gel filled polymethyl methacrylate (PMMA) head phantom (16 cm diameter) used to accurately reproduce every link in the GK treatment chain. The center of each shot served as a 'control point' in the assessment of the GK total geometric uncertainty, which depends on (a) the spatial dose delivery uncertainty of the PERFEXION GK unit used in this work, (b) the spatial distortions inherent in MR images commonly used for target delineation, and (c) the geometric uncertainty contributor associated with the image registration procedure performed by the Leksell GammaPlan (LGP) treatment planning system (TPS), in the case that registration is directly based on the apparent fiducial locations depicted in each MR image by the N-shaped rods on the Leksell localization box. The irradiated phantom was MR imaged at 1.5 T employing a T2-weighted pulse sequence. Four image series were acquired by alternating the frequency encoding axis and reversing the read gradient polarity, thus allowing the characterization of the MR-related spatial distortions. Results: MR spatial distortions stemming from main field (B{sub 0}) inhomogeneity as well as from susceptibility and chemical shift phenomena (also known as sequence dependent distortions) were found to be of the order of 0.5 mm, while those owing to gradient nonlinearities (also known as sequence independent distortions) were found to increase with distance from the MR scanner isocenter extending up to 0.47 mm at an Euclidean distance of 69.6 mm. Regarding the LGP image registration procedure, the corresponding average contribution to the total geometric uncertainty ranged from 0.34 to 0.80 mm. The average total geometric uncertainty, which also includes the GK spatial dose delivery uncertainty, was found equal to (0.88 {+-} 0.16), (0.88 {+-} 0.26), (1.02 {+-} 0.09), and (1.15 {+-} 0.24) mm for the MR image series acquired with the read gradient polarity (direction) set toward right, left, posterior, and anterior, respectively. Conclusions: The implemented methodology seems capable of assessing the total geometric uncertainty, as well as of characterizing its contributors, ascribed to the entire GK treatment delivery (i.e., from MR imaging to GK dose delivery) for an extended region of the Leksell stereotactic space. Results obtained indicate that the selection of both the frequency encoding axis and the read gradient polarity during MRI acquisition may affect the magnitude as well as the spatial components of the total geometric uncertainty.
Perturbative model for the saturation of energetic-particle-driven modes limited by self-generated zonal modes
We present a simplified energy-conserving approach to incorporate wave–wave nonlinear effects within the framework commonly used to describe wave–particle nonlinearities. In particular, the effects of zonal mode (ZM) generation on the determination of the saturation amplitude of energetic particle (EP)-driven Alfvénic instabilities is studied. The model assumes that the zonal perturbations grow at a rate twice that of the original (pump) wave, consistent with a beat-driven (or force-driven) generation mechanism. The evolution and saturation of the mode amplitude are investigated both analytically and numerically within our reduced model assumptions, in both the collisionless and scattering-dominated regimes. These studies underscore the crucial role of sources and sinks in capturing the impact and the role of beat-driven zonal perturbations on mode evolution. In the realistic case of saturation set by sources and sinks, we discuss the role of a finite amplitude ZM in reducing microturbulent particle scattering, thus limiting the energy source for the resonant mode. We then discuss comparisons between the model’s predictions and simulation results. The model reproduces key features observed in gyrokinetic simulations as the reduction in saturated mode amplitude and the onset of wave–wave nonlinear effects as functions of mode growth rate and amplitude. Thanks to its simplicity, it can be readily implemented into codes based on reduced models, thereby improving their predictive capability for strongly driven instabilities.
Investigation of Response Amplitude Operators for Floating Offshore Wind Turbines: Preprint
This paper examines the consistency between response amplitude operators (RAOs) computed from WAMIT, a linear frequency-domain tool, to RAOs derived from time-domain computations based on white-noise wave excitation using FAST, a nonlinear aero-hydro-servo-elastic tool. The RAO comparison is first made for a rigid floating wind turbine without wind excitation. The investigation is further extended to examine how these RAOs change for a flexible and operational wind turbine. The RAOs are computed for below-rated, rated, and above-rated wind conditions. The method is applied to a floating wind system composed of the OC3-Hywind spar buoy and NREL 5-MW wind turbine. The responses are compared between FAST and WAMIT to verify the FAST model and to understand the influence of structural flexibility, aerodynamic damping, control actions, and waves on the system responses. The results show that based on the RAO computation procedure implemented, the WAMIT- and FAST-computed RAOs are similar (as expected) for a rigid turbine subjected to waves only. However, WAMIT is unable to model the excitation from a flexible turbine. Further, the presence of aerodynamic damping decreased the platform surge and pitch responses, as computed by both WAMIT and FAST when wind was included. Additionally, the influence of gyroscopic excitation increased the yaw response, which was captured by both WAMIT and FAST.
Nonlinear force-free extrapolation of the coronal magnetic field based on the magnetohydrodynamic relaxation method
We develop a nonlinear force-free field (NLFFF) extrapolation code based on the magnetohydrodynamic (MHD) relaxation method. We extend the classical MHD relaxation method in two important ways. First, we introduce an algorithm initially proposed by Dedner et al. to effectively clean the numerical errors associated with ∇ · B . Second, the multigrid type method is implemented in our NLFFF to perform direct analysis of the high-resolution magnetogram data. As a result of these two implementations, we successfully extrapolated the high resolution force-free field introduced by Low and Lou with better accuracy in a drastically shorter time. We also applied our extrapolation method to the MHD solution obtained from the flux-emergence simulation by Magara. We found that NLFFF extrapolation may be less effective for reproducing areas higher than a half-domain, where some magnetic loops are found in a state of continuous upward expansion. However, an inverse S-shaped structure consisting of the sheared and twisted loops formed in the lower region can be captured well through our NLFFF extrapolation method. We further discuss how well these sheared and twisted fields are reconstructed by estimating the magnetic topology and twist quantitatively.
Implicit high-order method for calculating rarefied gas flow in a planar microchannel
An efficient numerical algorithm for calculating rarefied gas flows in planar microchannels on the basis of the Boltzmann kinetic equation with the linearized S-model collision integral is presented. The algorithm consists of a high-order spatial discretisation on unstructured meshes, conservative procedure to calculate macroscopic quantities and efficient one-step implicit time evolution method. It therefore works across all flow regimes from the free-molecular to nearly continuum ones and provides rapid convergence to steady state solutions. The parallel implementation is provided via MPI programming paradigm. The performance of the method is illustrated by computing the flow for length to the width ratios for up to 10{sup 3} in the wide range of Knudsen numbers. Numerical estimates of efficiency of implicit time marching and parallel performance as well as convergence studies in both physical and velocity spaces are provided. The end effects and other essentially two-dimensional features of the flow are analysed and a detailed comparison with the case of an infinitely long channel is carried out. The presented numerical data can be used as reference for future studies of nonlinear flows as well as for comparison with other numerical approaches and flow models.
Fully coupled hydro-mechanical numerical manifold modeling of porous rock with dominant fractures
Coupled hydro-mechanical (HM) processes are significant in geological engineering such as oil and gas extraction, geothermal energy, nuclear waste disposal and for the safety assessment of dam foundations and rock slopes, where the geological media usually consist of fractured rock masses. We developed a model for the analysis of coupled hydro-mechanical processes in porous rock containing dominant fractures, by using the numerical manifold method (NMM). In the current model, the fractures are regarded as different material domains from surrounding rock, i.e., finite-thickness fracture zones as porous media. Compared with the rock matrix, these fractured porous media are characterized with nonlinear behavior of hydraulic and mechanical properties, involving not only direct (poroelastic) coupling but also indirect (property change) coupling. By combining the potential energy associated with mechanical responses, fluid flow and solid–fluid interactions, a new formulation for direct HM coupling in porous media is established. For indirect coupling associated with fracture opening/closure, we developed a new approach implicitly considering the nonlinear properties by directly assembling the corresponding strain energy. Compared with traditional methods with approximation of the nonlinear constitutive equations, this new formulation achieves a more accurate representation of the nonlinear behavior. We implemented the new model for coupled HM analysis in NMM, which has fixed mathematical grid and accurate integration, and developed a new computer code. We tested the code for direct coupling on two classical poroelastic problems with coarse mesh and compared the results with the analytical solutions, achieving excellent agreement, respectively. We tested for indirect coupling on models with a single dominant fracture and obtained reasonable results. The current poroelastic NNM model with a continuous finite-thickness fracture zone will be further developed considering thin fractures in a discontinuous approach for a comprehensive model for HM analysis in fractured porous rock masses.