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At least 109 records · Page 6

Radiogenic transformation of human mammary epithelial cells in vitro

Cancer induction by space radiations is a major concern for manned space exploration. Accurate assessment of radiation risk at low doses requires basic understanding of mechanism(s) of radiation carcinogenesis. For determining the oncogenic effects of ionizing radiation in human epithelial cells, we transformed a mammary epithelial cell line (185B5), which was immortalized by benzo(a)pyrene, with energetic heavy ions and obtained several transformed clones. These transformed cells showed growth properties on Matrigel similar to human mammary tumor cells. To better understand the mechanisms of radiogenic transformation of human cells, we systematically examined the alterations in chromosomes and cancer genes. Among 16 autosomes examined for translocations, by using fluorescence in situ hybridization (FISH) technique, chromosomes 3, 12, 13, 15, 16, and 18 appeared to be normal in transformed cells. Chromosomes 1, 4, 6, 8, and 17 in transformed cells, however, showed patterns different from those in nontransformed cells. Southern blot analyses indicated no detectable alterations in myc, ras, Rb, or p53 genes. Further studies of chromosome 17 by using in situ hybridization with unique sequence p53 gene probe and a centromere probe showed no loss of p53 gene in transformed cells. Experimental results from cell fusion studies indicated that the transforming gene(s) is recessive. The role of genomic instability and tumor suppressor gene(s) in radiogenic transformation of human breast cells remains to be identified.

NASA Center JSC↗

Signal transduction in T lymphocytes in microgravity

More than 120 experiments conducted in space in the last 15 years have shown that dramatic changes are occurring in several types of single cells during their exposure to microgravity. One focus of today's research on cells in space is on signal transduction, especially those steps involving the cytoskeleton and cell-cell interactions. Signal transduction is often altered in microgravity as well as in hypergravity. This leads to changes in cell proliferation, genetic expression and differentiation. Interesting examples are leukocytes, HeLa cells, epidermoid cells and osteoblastic cells. Signalling pathways were studied in T lymphocytes in microgravity by several investigators after the discovery that mitogenic activation in vitro is virtually nil at 0g. T cells are a good model to study signal transduction because three extracellular signals (mitogen, IL-1 and IL-2) are required for full activation, and two classical pathways (via proteins G and PKC) are activated within the cell. In addition, low molecular weight GTP-binding proteins (Ras and Rap) are interacting with the cytoskeleton. The data at 0g support the notion that the expression of IL-2 receptor is inhibited at 0g, while mitogen binding and the transmission of IL-1 by accessory cells occur normally. In addition, alterations of the cytoskeleton suggest that the interaction with Rap proteins is disturbed. Data obtained with phorbol esters indicate that the function of PKC is changed in microgravity. Similar conclusions are drawn from the results with epidermoid cells A431.

short duration↗

Substrate flexibility regulates growth and apoptosis of normal but not transformed cells

One of the hallmarks of oncogenic transformation is anchorage-independent growth (27). Here we demonstrate that responses to substrate rigidity play a major role in distinguishing the growth behavior of normal cells from that of transformed cells. We cultured normal or H-ras-transformed NIH 3T3 cells on flexible collagen-coated polyacrylamide substrates with similar chemical properties but different rigidity. Compared with cells cultured on stiff substrates, nontransformed cells on flexible substrates showed a decrease in the rate of DNA synthesis and an increase in the rate of apoptosis. These responses on flexible substrates are coupled to decreases in cell spreading area and traction forces. In contrast, transformed cells maintained their growth and apoptotic characteristics regardless of substrate flexibility. The responses in cell spreading area and traction forces to substrate flexibility were similarly diminished. Our results suggest that normal cells are capable of probing substrate rigidity and that proper mechanical feedback is required for regulating cell shape, cell growth, and survival. The loss of this response can explain the unregulated growth of transformed cells.

Non-NASA Center↗

Rac-1 and Raf-1 kinases, components of distinct signaling pathways, activate myotonic dystrophy protein kinase

Myotonic dystrophy protein kinase (DMPK) is a serine-threonine protein kinase encoded by the myotonic dystrophy (DM) locus on human chromosome 19q13.3. It is a close relative of other kinases that interact with members of the Rho family of small GTPases. We show here that the actin cytoskeleton-linked GTPase Rac-1 binds to DMPK, and coexpression of Rac-1 and DMPK activates its transphosphorylation activity in a GTP-sensitive manner. DMPK can also bind Raf-1 kinase, the Ras-activated molecule of the MAP kinase pathway. Purified Raf-1 kinase phosphorylates and activates DMPK. The interaction of DMPK with these distinct signals suggests that it may play a role as a nexus for cross-talk between their respective pathways and may partially explain the remarkable pleiotropy of DM.

NASA Discipline Musculoskeletal↗

BIGEL analysis of gene expression in HL60 cells exposed to X rays or 60 Hz magnetic fields

We screened a panel of 1,920 randomly selected cDNAs to discover genes that are differentially expressed in HL60 cells exposed to 60 Hz magnetic fields (2 mT) or X rays (5 Gy) compared to unexposed cells. Identification of these clones was accomplished using our two-gel cDNA library screening method (BIGEL). Eighteen cDNAs differentially expressed in X-irradiated compared to control HL60 cells were recovered from a panel of 1,920 clones. Differential expression in experimental compared to control cells was confirmed independently by Northern blotting of paired total RNA samples hybridized to each of the 18 clone-specific cDNA probes. DNA sequencing revealed that 15 of the 18 cDNA clones produced matches with the database for genes related to cell growth, protein synthesis, energy metabolism, oxidative stress or apoptosis (including MYC, neuroleukin, copper zinc-dependent superoxide dismutase, TC4 RAS-like protein, peptide elongation factor 1alpha, BNIP3, GATA3, NF45, cytochrome c oxidase II and triosephosphate isomerase mRNAs). In contrast, BIGEL analysis of the same 1,920 cDNAs revealed no differences greater than 1.5-fold in expression levels in magnetic-field compared to sham-exposed cells. Magnetic-field-exposed and control samples were analyzed further for the presence of mRNA encoding X-ray-responsive genes by hybridization of the 18 specific cDNA probes to RNA from exposed and control HL60 cells. Our results suggest that differential gene expression is induced in approximately 1% of a random pool of cDNAs by ionizing radiation but not by 60 Hz magnetic fields under the present experimental conditions.

Non-NASA Center↗

Clouds in GEOS-5

The GEOS-5 atmospheric model is being developed as a weather-and-climate capable model. It must perform well in assimilation mode as well as in weather and climate simulations and forecasts and in coupled chemistry-climate simulations. In developing GEOS-5, attention has focused on the representation of moist processes. The moist physics package uses a single phase prognostic condensate and a prognostic cloud fraction. Two separate cloud types are distinguished by their source: "anvil" cloud originates in detraining convection, and large-scale cloud originates in a PDF-based condensation calculation. Ice and liquid phases for each cloud type are considered. Once created, condensate and fraction from the anvil and statistical cloud types experience the same loss processes: evaporation of condensate and fraction, auto-conversion of liquid or mixed phase condensate, sedimentation of frozen condensate, and accretion of condensate by falling precipitation. The convective parameterization scheme is the Relaxed Arakawa-Schubert, or RAS, scheme. Satellite data are used to evaluate the performance of the moist physics packages and help in their tuning. In addition, analysis of and comparisons to cloud-resolving models such as the Goddard Cumulus Ensemble model are used to help improve the PDFs used in the moist physics. The presentation will show some of our evaluations including precipitation diagnostics.

Bacmeister, Julio↗

Using High Frequency Passive Microwave, A-train, and TRMM Data to Evaluate Hydrometer Structure in the NASA GEOS-5 Data Assimilation System

Validating water vapor and prognostic condensate in global models remains a challenging research task. Model parameterizations are still subject to a large number of tunable parameters; furthermore, accurate and representative in situ observations are very sparse, and satellite observations historically have significant quantitative uncertainties. Progress on improving cloud / hydrometeor fields in models stands to benefit greatly from the growing inventory ofA-Train data sets. ill the present study we are using a variety of complementary satellite retrievals of hydrometeors to examine condensate produced by the emerging NASA Modem Era Retrospective Analysis for Research and Applications, MERRA, and its associated atmospheric general circulation model GEOS5. Cloud and precipitation are generated by both grid-scale prognostic equations and by the Relaxed Arakawa-Schubert (RAS) diagnostic convective parameterization. The high frequency channels (89 to 183.3 GHz) from AMSU-B and MRS on NOAA polar orbiting satellites are being used to evaluate the climatology and variability of precipitating ice from tropical convective anvils. Vertical hydrometeor structure from the Tropical Rainfall Measuring Mission (TRMM) and CloudSat radars are used to develop statistics on vertical hydrometeor structure in order to better interpret the extensive high frequency passive microwave climatology. Cloud liquid and ice water path data retrieved from the Moderate Resolution Imaging Spectroradiometer, MODIS, are used to investigate relationships between upper level cloudiness and tropical deep convective anvils. Together these data are used to evaluate cloud / ice water path, gross aspects of vertical hydrometeor structure, and the relationship between cloud extent and surface precipitation that the MERRA reanalysis must capture.

Robertson, Franklin↗

Modifying the Heliophysics Data Policy to Better Enable Heliophysics Research

The Heliophysics (HP) Science Data Management Policy, adopted by HP in June 2007, has helped to provide a structure for the HP data lifecycle. It provides guidelines for Project Data Management Plans and related documents, initiates Resident Archives to maintain data services after a mission ends, and outlines a route to the unification of data finding, access, and distribution through Virtual observatories. Recently we have filled in missing pieces that assure more coherence and a home for the VxOs (through the 'Heliophsyics Data and Model Consortium'), and provide greater clarity with respect to long term archiving. In particular, the new policy which has been vetted with many community members, details the 'Final Archives' that are to provide long-term data access. These are distinguished from RAs in that they provide little additional service beyond servicing data, but critical to their success is that the final archival materials include calibrated data in useful formats such as one finds in CDAWeb and various ASCII or FITS archives. Having a clear goal for legacy products, to be detailed as part of the Mission Archives Plans presented at Senior Reviews, will help to avoid the situation so common in the past of having archival products that preserve bits well but not readily usable information. We hope to avoid the need for the large numbers of 'data upgrade' projects that have been necessary in recent years.

Hayes, Jeffrey↗

Demonstration of Effects on Tropical Cyclone Forecasts with a High Resolution Global Model from Variation in Cumulus Convection Parameterization

The Goddard Earth Observing System Model, Version 5 (GEOS-5) is a system of models that have been developed at Goddard Space Flight Center to support NASA's earth science research in data analysis, observing system modeling and design, climate and weather prediction, and basic research. The work presented used GEOS-5 with 0.25o horizontal resolution and 72 vertical levels (up to 0.01 hP) resolving both the troposphere and stratosphere, with closer packing of the levels close to the surface. The model includes explicit (grid-scale) moist physics, as well as convective parameterization schemes. Results will be presented that will demonstrate strong dependence in the results of modeling of a strong hurricane on the type of convective parameterization scheme used. The previous standard (default) option in the model was the Relaxed Arakawa-Schubert (RAS) scheme, which uses a quasi-equilibrium closure. In the cases shown, this scheme does not permit the efficient development of a strong storm in comparison with observations. When this scheme is replaced by a modified version of the Kain-Fritsch scheme, which was originally developed for use on grids with intervals of order 25 km such as the present one, the storm is able to develop to a much greater extent, closer to that of reality. Details of the two cases will be shown in order to elucidate the differences in the two modeled storms.

Miller, Timothy L.↗

Alternative Representations of Convective Processes in the NASA GEOS-5 AGCM

The gap in explicit resolution of phenomena between global climate models and cloud resolving models is shrinking at a steady pace with global integrations of several km in resolution now practical for at least some time scales. In moving toward finer resolution the long standing problem of convective parameterization is being examined along with the assumption of convective quasi-equilibrium and how this can be reconciled with the stochastic and intermittent nature of convection. In this context we examine the nature of parameterized convection in the NASA Goddard Earth Observing System (GEOS-5) Atmospheric General Circulation Model. Our analysis uses both coarse (2.5 degree) and fine scale 0.25 degree spatial resolution integrations. Two basic formulations are compared: the default option is the Relaxed Arakawa-Schubert (RAS) scheme which invokes a sequence of linearly entraining plumes and quasi-equilibrium closure. An optional modification of this method (the "Stochastic Tokioka" constraint) places a random lower limit on plume entrainment. An alternative representation is the Kain-Fritsch parameterization which was originally developed for mesoscale numerical modeling strategies. Here entrainment is determined by a crude buoyancy sorting approach that allows the plume spectrum to be more responsive to ambient vertical stratification of moisture. Diagnostics of the model behavior are referenced to recent observational evidence of continuous phase transition behavior. In particular we examine the relationship between column water vapor and probablility of convective presence and intensity. Sensitivity of the statistics of convective behavior to parcel mixing/entrainment formulations and parcel initial thermodynamics are considered. Observational statistics from A-Train and TRMM sensors provide validation of the model integrations.

Robertson, Franklin↗

Sensitivity of Tropical Cyclones to Parameterized Convection in the NASA GEOS5 Model

The sensitivity of tropical cyclones (TCs) to changes in parameterized convection is investigated to improve the simulation of TCs in the North Atlantic. Specifically, the impact of reducing the influence of the Relaxed Arakawa-Schubert (RAS) scheme-based parameterized convection is explored using the Goddard Earth Observing System version5 (GEOS5) model at 0.25 horizontal resolution. The years 2005 and 2006 characterized by very active and inactive hurricane seasons, respectively, are selected for simulation. A reduction in parameterized deep convection results in an increase in TC activity (e.g., TC number and longer life cycle) to more realistic levels compared to the baseline control configuration. The vertical and horizontal structure of the strongest simulated hurricane shows the maximum lower-level (850-950hPa) wind speed greater than 60 ms and the minimum sea level pressure reaching 940mb, corresponding to a category 4 hurricane - a category never achieved by the control configuration. The radius of the maximum wind of 50km, the location of the warm core exceeding 10 C, and the horizontal compactness of the hurricane center are all quite realistic without any negatively affecting the atmospheric mean state. This study reveals that an increase in the threshold of minimum entrainment suppresses parameterized deep convection by entraining more dry air into the typical plume. This leads to cooling and drying at the mid- to upper-troposphere, along with the positive latent heat flux and moistening in the lower-troposphere. The resulting increase in conditional instability provides an environment that is more conducive to TC vortex development and upward moisture flux convergence by dynamically resolved moist convection, thereby increasing TC activity.

GEOS5↗

IAA Correlator Center

The activities of the six-station IAA RAS correlator include regular processing of national geodetic VLBI programs Ru-E, Ru-U, and Ru-F. The Ru-U sessions have been transferred in e-VLBI mode and correlated in the IAA Correlator Center automatically since 2011. The DiFX software correlator is used at the IAA in some astrophysical experiments.

Surkis, Igor↗

Expanding NASA and Roscosmos Scientific Collaboration on the International Space Station

The International Space Station (ISS) is a world-class laboratory orbiting in space. NASA and Roscosmos have developed a strong relationship through the ISS Program Partnership, working together and with the other ISS Partners for more than twenty years. Since 2013, based on a framework agreement between the Program Managers, NASA and Roscosmos are building a joint program of collaborative research on ISS. This international collaboration is developed and implemented in phases. Initially, members of the ISS Program Science Forum from NASA and TsNIIMash (representing Roscosmos) identified the first set of NASA experiments that could be implemented in the "near term". The experiments represented the research categories of Technology Demonstration, Microbiology, and Education. Through these experiments, the teams from the "program" and "operations" communities learned to work together to identify collaboration opportunities, establish agreements, and jointly plan and execute the experiments. The first joint scientific activity on ISS occurred in January 2014, and implementation of these joint experiments continues through present ISS operations. NASA and TsNIIMash have proceeded to develop "medium term" collaborations, where scientists join together to improve already-proposed experiments. A major success is the joint One-Year Mission on ISS, with astronaut Scott Kelly and cosmonaut Mikhail Kornienko, who returned from ISS in March, 2016. The teams from the NASA Human Research Program and the RAS Institute for Biomedical Problems built on their considerable experience to design joint experiments, learn to work with each other's protocols and processes, and share medical and research data. New collaborations are being developed between American and Russian scientists in complex fluids, robotics, rodent research and space biology, and additional human research. Collaborations are also being developed in Earth Remote Sensing, where scientists will share data from imaging systems mounted on ISS as well as other orbiting spacecraft to improve our understanding of the Earth and its climate. NASA and Roscosmos continue to encourage international scientific cooperation and expanded use of the ISS Laboratory. "Long-term", larger collaborations will achieve scientific objectives that no single national science team or agency can achieve on its own. The joint accomplishments achieved so far have paved the way for a stronger international scientific community and improved results and benefits from ISS.

Hasbrook, Pete↗

CFD Analysis of Mixing Characteristics of Several Fuel Injectors at Hypervelocity Flow Conditions

CFD analysis is presented of the mixing characteristics and performance of three fuel injectors at hypervelocity flow conditions. The calculations were carried out using the VULCAN-CFD solver and Reynolds-Averaged Simulations (RAS). The high Mach number flow conditions match those proposed for the planned experiments conducted as a part of the Enhanced Injection and Mixing Project (EIMP) at the NASA Langley Research Center. The EIMP aims to investigate scramjet fuel injection and mixing physics, improve the understanding of underlying physical processes, and develop enhancement strategies and functional relationships relevant to flight Mach numbers greater than eight. Because of the high Mach number flow considered, the injectors consist of a fuel placement device, a strut; and a fluidic vortical mixer, a ramp. These devices accomplish the necessary task of distributing and mixing fuel into the supersonic cross-flow albeit via different strategies. Both of these devices were previously studied at lower flight Mach numbers where they exhibited promising performance in terms of mixing efficiency and total pressure recovery. For comparison, a flush-wall injector is also included. This type of injector generally represents the simplest method of introducing fuel into a scramjet combustor, however, at high flight Mach number conditions, the dynamic pressure needed to induce sufficient fuel penetration may be difficult to achieve along with other requirements such as achieving desired levels of fuel-to-air mixing at the required equivalence ratio. The three injectors represent the baseline configurations planned for the experiments. The current work discusses the mixing flow field behavior and differences among the three fuel injectors, mixing performance as described by the mixing efficiency and the total pressure recovery, and performance considerations based on the thrust potential.

Drozda, Tomasz G.↗

Comparison of Mixing Characteristics for Several Fuel Injectors on an Open Plate and in a Ducted Flowpath Configuration at Hypervelocity Flow Conditions

In order to reduce the cost and complexity associated with fuel injection and mixing experiments for high-speed flows, and to further enable optical access to the test section for nonintrusive diagnostics, the Enhanced Injection and Mixing Project (EIMP) utilizes an open flat plate configuration to characterize inert mixing properties of various fuel injectors for hypervelocity applications. The experiments also utilize reduced total temperature conditions to alleviate the need for hardware cooling. The use of "cold" flows and non-reacting mixtures for mixing experiments is not new, and has been extensively utilized as a screening technique for scramjet fuel injectors. The impact of reduced facility-air total temperature, and the use of inert fuel simulants, such as helium, on the mixing character of the flow has been assessed in previous numerical studies by the authors. Mixing performance was characterized for three different injectors: a strut, a ramp, and a flushwall. The present study focuses on the impact of using an open plate to approximate mixing in the duct. Toward this end, Reynolds-averaged simulations (RAS) were performed for the three fuel injectors in an open plate configuration and in a duct. The mixing parameters of interest, such as mixing efficiency and total pressure recovery, are then computed and compared for the two configurations. In addition to mixing efficiency and total pressure recovery, the combustion efficiency and thrust potential are also computed for the reacting simulations.

Drozda, Tomasz G.↗

Analysis of Interactions Between Urban Air Mobility (UAM) Operations and Conventional Traffic in Urban Areas: Traffic Alert and Collision Avoidance System (TCAS) Study for UAM Operations

This paper presents results on potential interaction effects from UAM (Urban Air Mobility) operations integrated into current operational scenarios by evaluating if/where/how Traffic alert and Collision Avoidance System (TCAS) alerts are triggered on-board commercial aircraft. A range of operational scenarios are evaluated with combinations of UAM vehicle route, speed, altitude, and direction along the DFW (Dallas-Fort Worth) "spine route." The effect of UAM altitude uncertainty on the above is also explored. The analysis was done for both South flow and North flow configurations of DFW. When UAM operations are deterministic, no TCAS RAs (Resolution Advisories) are issued. However, UAM altitude uncertainties point out geographic areas of concern with the associated severity of interactions.

Airspace↗

Analysis of Interactions Between Urban Air Mobility (UAM) Operations and Conventional Traffic in Urban Areas: Traffic Alert and Collision Avoidance (TCAS) Study for UAM Operations

This paper presents a preliminary modeling and analysis of interactions between proposed UAM operations and present-day conventional traffic if UAM operations occurred along FAA- approved helicopter routes and altitude ceilings. It assesses the extent to which the UAM operations will trigger TCAS resolution advisories (RA) aboard the conventional aircraft in the Dallas/Fort Worth (DFW) terminal airspace. It is observed that under deterministic UAM operational conditions, no RAs will be triggered. Furthermore, the impact of UAM altitude uncertainty is also evaluated. It is observed that restricting the UAM cruise altitudes to 990 feet above Mean Sea Level (MSL) or below reduced the chance of triggering an RA to under five percent throughout the day, even in the presence of maximum altitude error of 30 feet.

Bulusu, Vishwanath↗

The Effect of Turbulence Modeling on the Mixing Characteristics of Several Fuel Injectors at Hypervelocity Flow Conditions

CFD analysis is presented on the effects of turbulence modeling choices on the mixing characteristics and performance of three fuel injectors at hypervelocity flow conditions. The analyses were carried out with the VULCAN-CFD solver using Reynolds-Averaged Simulations (RAS). The hypervelocity flow conditions match the high Mach number flow of the experiments conducted as a part of the Enhanced Injection and Mixing Project (EIMP) at the NASA Langley Research Center. The three injectors are the baseline configurations used in the experiments and represent three categories of injectors typically considered individually or in combination for fueling high-speed propulsive devices. The current work discusses the impact of the turbulence model and the turbulent Schmidt number on the mixing flow field behavior and the mixing performance as described by the one-dimensional values of the Mach number, total pressure recovery, and the mixing efficiency. Because planar laser induced fluorescence (PLIF) images are available from the EIMP experiments, the sensitivity of the synthetic LIF signal to turbulence modeling choices is also examined to determine whether PLIF can be extended beyond its intended qualitative visualization purpose and used to guide CFD turbulence model and parameter selections. It is found that the mixing performance, as quantified using mixing efficiency, exhibits a strong sensitivity to both turbulence model choice and turbulent Schmidt number value. However, the synthetic LIF signal only demonstrates a modest level of sensitivity, which suggests that PLIF is of limited use for guiding CFD turbulence model and parameter selections.

Drozda, Tomasz G.↗