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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 109 records · Page 6
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

The diversity of three-dimensional photonic crystals

Many butterflies, birds, beetles, and chameleons owe their spectacular colors to the microscopic patterns within their wings, feathers, or skin. When these patterns, or photonic crystals, result in the omnidirectional reflection of commensurate wavelengths of light, it is due to a complete photonic band gap (PBG). The number of natural crystal structures known to have a PBG is relatively small, and those within the even smaller subset of notoriety, including diamond and inverse opal, have proven difficult to synthesize. Here, we report more than 150,000 photonic band calculations for thousands of natural crystal templates from which we predict 351 photonic crystal templates – including nearly 300 previously-unreported structures – that can potentially be realized for a multitude of applications and length scales, including several in the visible range via colloidal self-assembly. With this large variety of 3D photonic crystals, we also revisit and discuss oft-used primary design heuristics for PBG materials.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Finely tunable dynamical coloration using bicontinuous micrometer-domains

Nanostructures similar to those found in the vividly blue wings of Morpho butterflies and colorful photonic crystals enable structural color through constructive interference of light waves. Different from commonly studied structure-colored materials using periodic structures to manipulate optical properties, we report a previously unrecognized approach to precisely control the structural color and light transmission via a novel photonic colloidal gel without long-range order. Nanoparticles in this gel form micrometer-sized bicontinuous domains driven by the microphase separation of binary solvents. This approach enables dynamic coloration with a precise wavelength selectivity over a broad range of wavelengths extended well beyond the visible light that is not achievable with traditional methods. The dynamic wavelength selectivity is thermally tunable, reversible, and the material fabrication is easily scalable.

42 ENGINEERING↗
DOE OSTI2022

3D structure and in situ arrangements of CatSper channel in the sperm flagellum

The sperm calcium channel CatSper plays a central role in successful fertilization as a primary Ca 2+ gateway. Here, we applied cryo-electron tomography to visualize the higher-order organization of the native CatSper complex in intact mammalian sperm. The repeating CatSper units form long zigzag-rows along mouse and human sperm flagella. Above each tetrameric channel pore, most of the extracellular domains form a canopy that interconnects to a zigzag-shaped roof. Murine CatSper contains an additional wing-structure connected to the tetrameric channel. The intracellular domains link two neighboring channels to a diagonal array, suggesting a dimer formation. Fitting of an atomic model of isolated monomeric CatSper to the in situ map reveals supramolecular interactions and assembly of the CatSper complex. Loss of EFCAB9-CATSPERζ alters the architecture and interactions of the channels, resulting in fragmentation and misalignment of the zigzag-rows and disruption of flagellar movement in Efcab9 -/- sperm. This work offers unique insights into the structural basis for understanding CatSper regulation of sperm motility.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Generating reference maps of interactome networks illuminates genetic studies by providing a protein-centric approach to finding new components of existing pathways, complexes, and processes. We apply state-of-the-art methods to identify binary protein-protein interactions (PPIs) for Drosophila melanogaster. Four all-by-all yeast two-hybrid (Y2H) screens of > 10,000 Drosophila proteins result in the ‘FlyBi’ dataset of 8723 PPIs among 2939 proteins. Testing subsets of data from FlyBi and previous PPI studies using an orthogonal assay allows for normalization of data quality; subsequent integration of FlyBi and previous data results in an expanded binary Drosophila reference interaction network, DroRI, comprising 17,232 interactions among 6511 proteins. We use FlyBi data to generate an autophagy network, then validate in vivo using autophagy-related assays. The deformed wings (dwg) gene encodes a protein that is both a regulator and a target of autophagy. Altogether, these resources provide a foundation for building new hypotheses regarding protein networks and function.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Structural and mechanistic basis for redox sensing by the cyanobacterial transcription regulator RexT

Abstract Organisms have a myriad of strategies for sensing, responding to, and combating reactive oxygen species, which are unavoidable consequences of aerobic life. In the heterocystous cyanobacterium Nostoc sp. PCC 7120, one such strategy is the use of an ArsR-SmtB transcriptional regulator RexT that senses H 2 O 2 and upregulates expression of thioredoxin to maintain cellular redox homeostasis. Different from many other members of the ArsR-SmtB family which bind metal ions, RexT has been proposed to use disulfide bond formation as a trigger to bind and release DNA. Here, we present high-resolution crystal structures of RexT in the reduced and H 2 O 2 -treated states. These structures reveal that RexT showcases the ArsR-SmtB winged-helix-turn-helix fold and forms a vicinal disulfide bond to orchestrate a response to H 2 O 2 . The importance of the disulfide-forming Cys residues was corroborated using site-directed mutagenesis, mass spectrometry, and H 2 O 2 -consumption assays. Furthermore, an entrance channel for H 2 O 2 was identified and key residues implicated in H 2 O 2 activation were pinpointed. Finally, bioinformatics analysis of the ArsR-SmtB family indicates that the vicinal disulfide “redox switch” is a unique feature of cyanobacteria in the Nostocales order, presenting an interesting case where an ArsR-SmtB protein scaffold has been evolved to showcase peroxidatic activity and facilitate redox-based regulation.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Chromatin binding by HORMAD proteins regulates meiotic recombination initiation

The meiotic chromosome axis coordinates chromosome organization and interhomolog recombination in meiotic prophase and is essential for fertility. In S. cerevisiae , the HORMAD protein Hop1 mediates the enrichment of axis proteins at nucleosome-rich islands through a central chromatin-binding region (CBR). Here, we use cryoelectron microscopy to show that the Hop1 CBR directly recognizes bent nucleosomal DNA through a composite interface in its PHD and winged helix–turn–helix domains. Targeted disruption of the Hop1 CBR-nucleosome interface causes a localized reduction of axis protein binding and meiotic DNA double-strand breaks (DSBs) in axis islands and leads to defects in chromosome synapsis. Synthetic effects with mutants of the Hop1 regulator Pch2 suggest that nucleosome binding delays a conformational switch in Hop1 from a DSB-promoting, Pch2-inaccessible state to a DSB-inactive, Pch2-accessible state to regulate the extent of meiotic DSB formation. Phylogenetic analyses of meiotic HORMADs reveal an ancient origin of the CBR, suggesting that the mechanisms we uncover are broadly conserved.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Maximum entropy distributions of dark matter in ΛCDM cosmology

Context. Small-scale challenges to ΛCDM cosmology require a deeper understanding of dark matter physics. Aims. This paper aims to develop the maximum entropy distributions for dark matter particle velocity (denoted by X ), speed (denoted by Z ), and energy (denoted by E ) that are especially relevant on small scales where system approaches full virialization. Methods. For systems involving long-range interactions, a spectrum of halos of different sizes is required to form to maximize system entropy. While the velocity in halos can be Gaussian, the velocity distribution throughout the entire system, involving all halos of different sizes, is non-Gaussian. With the virial theorem for mechanical equilibrium, we applied the maximum entropy principle to the statistical equilibrium of entire system, such that the maximum entropy distribution of velocity (the X distribution) could be analytically derived. The halo mass function was not required in this formulation, but it did indeed result from the maximum entropy. Results. The predicted X distribution involves a shape parameter α and a velocity scale, v 0 . The shape parameter α reflects the nature of force ( α → 0 for long-range force or α → ∞ for short-range force). Therefore, the distribution approaches Laplacian with α → 0 and Gaussian with α → ∞. For an intermediate value of α , the distribution naturally exhibits a Gaussian core for v ≪ v 0 and exponential wings for v ≫ v 0 , as confirmed by N -body simulations. From this distribution, the mean particle energy of all dark matter particles with a given speed, v , follows a parabolic scaling for low speeds (∝ v 2 for v ≪ v 0 in halo core region, i.e., “Newtonian”) and a linear scaling for high speeds (∝ v for v ≫ v 0 in halo outskirt, i.e., exhibiting “non-Newtonian” behavior due to long-range gravity). We compared our results against N -body simulations and found a good agreement.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2026

Delving into the depths of NGC 3783 with XRISM

Using XRISM/Resolve 439 ks time-averaged spectra of the well-known Seyfert-1.5 active galactic nucleus (AGN) in NGC 3783, we investigated the nature of the Fe Kα emission line at 6.4 keV, the strongest and most common X-ray line observed in AGNs. Even the narrow component of the line is resolved with evident Fe Kα 1 (6.404 keV) and Kα 2 (6.391 keV) contributions with a 2:1 flux ratio, fully consistent with a neutral gas with negligible bulk velocity. The narrow and intermediate-width components have a full width at half maximum of 350 ± 50 km/s and 3510 ± 470 km/s, respectively, suggesting that they arise in the outer disk/torus and/or broad line region. We detect a 10% excess flux around 4–7 keV that is not described well by a symmetric Gaussian line but is consistent with a relativistically broadened emission line. In this study we took the simplest approach, modelling the asymmetric line as a single emission line (assuming neutral, He-like, or H-like iron) convolved with a relativistic disk line model. As expected, the inferred inclination angle (i) is highly sensitive to the assumed ionisation state and ranges between 17 and 44°. This model also constrains the black hole spin via the extent of the red wing: the required gravitational redshift in the fitted disk-line profile disfavours a non-spinning (Schwarzschild) black hole. The derived inner radius is close to the radius of the innermost stable circular orbit (rISCO) and is strongly correlated with the black hole spin. To better constrain the spin, we fixed the inner radius to r ISCO and derived a lower limit on the spin of a ≥ 0.29 at the 3σ confidence level. A Compton shoulder is detected in our data as well as a 2–3σ detection of the Cr Kα and Ni Kα lines.

Astronomy and AstroPhysics↗
DOE OSTI2021

Plasma expansion and relativistic filamentation in intense laser-irradiated cone targets

We report that compound parabolic concentrator (CPC) cone targets have been shown to produce increased MeV photons on the NIF-ARC by 10× over flat targets. Multiple x-ray frames can potentially be generated by firing the NIF-ARC's beamlets into distinct cone targets at few nanosecond relative delays. This requires that the cone targets with delayed beams are not degraded by their proximity to previous targets. One concern is that the spatial wings of a beam fired into one target can fall on neighboring targets, producing a preformed plasma that may interfere with laser light reaching the tip of the cone. In this work, 3D hydra simulations of realistic targets and beam parameters show that hundreds of micrometer scale length preplasmas are produced in cones within 1 mm of the laser spot. 2D particle-in-cell simulations of the intense main pulse in this preplasma indicate a density threshold for the onset of relativistic filamentation in our conditions. Applying our modeling approach to a NIF-ARC shot with an intentional 15 J prepulse yields good agreement with experimental results.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

Atom femtosecond optical trap based on spectrally filtered laser radiation

We have examined the use of alkali metal (rubidium) vapour for spectral filtering of broadband pulsed laser light that is used to produce a femtosecond pulsed optical dipole trap. It has been shown that, even at large detuning of the centre emission frequency from the frequency of atomic transitions, spectral components present in the wings of the laser emission line are capable of heating localised atoms, thus reducing their lifetime in the atomic trap. Using atomic vapour for filtering the laser emission spectrum, we have suppressed its spectral components resulting in heating. This has made it possible to increase the lifetime of atoms in the pulsed optical dipole trap to a value comparable to their lifetime in an optical trap formed by narrow-band cw laser light. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2020

How a raindrop gets shattered on biological surfaces

Many biological surfaces of animals and plants (e.g., bird feathers, insect wings, plant leaves, etc.) are superhydrophobic with rough surfaces at different length scales. Previous studies have focused on a simple drop-bouncing behavior on biological surfaces with low-speed impacts. However, we observed that an impacting drop at high speeds exhibits more complicated dynamics with unexpected shock-like patterns: Hundreds of shock-like waves are formed on the spreading drop, and the drop is then abruptly fragmented along with multiple nucleating holes. Such drop dynamics result in the rapid retraction of the spreading drop and thereby a more than twofold decrease in contact time. Our results may shed light on potential biological advantages of hypothermia risk reduction for endothermic animals and spore spreading enhancement for fungi via wave-induced drop fragmentation.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Evolution of single gyroid photonic crystals in bird feathers

Vivid, saturated structural colors are conspicuous and important features of many animals. A rich diversity of three-dimensional periodic photonic nanostructures is found in the chitinaceous exoskeletons of invertebrates. Three-dimensional photonic nanostructures have been described in bird feathers, but they are typically quasi-ordered. Here, we report bicontinuous single gyroid β-keratin and air photonic crystal networks in the feather barbs of blue-winged leafbirds ( Chloropsis cochinchinensis sensu lato ), which have evolved from ancestral quasi-ordered channel-type nanostructures. Self-assembled avian photonic crystals may serve as inspiration for multifunctional applications, as they suggest efficient, alternative routes to single gyroid synthesis at optical length scales, which has been experimentally elusive.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

In vivo visualization of butterfly scale cell morphogenesis in Vanessa cardui

Many organisms exhibit functional micro- and nanoscale materials with structural definition and performance that challenge synthetic fabrication techniques, yet we know little about the processes that enable their formation. Using butterfly scales as a model system for functional biomaterials, we establish a timeline of scale formation and quantify relevant structural parameters for developing painted lady butterflies. We overcome challenges of previous efforts by imaging structure formation directly in living organisms, which allows us to continuously observe the evolving wing tissue and the fine details of individual scale cells. Visualization of scale structure formation in live butterflies forms the basis for modeling the underlying biomechanical processes and opens avenues for their translation into advanced fabrication strategies.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Mapping the intrinsic photocurrent streamlines through micromagnetic heterostructure devices

Photocurrent in quantum materials is often collected at global contacts far away from the initial photoexcitation. This collection process is highly nonlocal. It involves an intricate spatial pattern of photocurrent flow (streamlines) away from its primary photoexcitation that depends sensitively on the configuration of current collecting contacts as well as the spatial nonuniformity and tensor structure of conductivity. Direct imaging to track photocurrent streamlines is challenging. Here, we demonstrate a microscopy method to image photocurrent streamlines through ultrathin heterostructure devices comprising platinum on yttrium iron garnet (YIG). We accomplish this by combining scanning photovoltage microscopy with a uniform rotating magnetic field. Here, local photocurrent is generated through a photo-Nernst type effect with its direction controlled by the external magnetic field. This enables the mapping of photocurrent streamlines in a variety of geometries that include conventional Hall bar-type devices, but also unconventional wing-shaped devices called electrofoils. In these, we find that photocurrent streamlines display contortion, compression, and expansion behavior depending on the shape and angle of attack of the electrofoil devices, much in the same way as tracers in a wind tunnel map the flow of air around an aerodynamic airfoil. This affords a powerful tool to visualize and characterize charge flow in optoelectronic devices.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2021

Myosin dilated cardiomyopathy mutation S532P disrupts actomyosin interactions, leading to altered muscle kinetics, reduced locomotion, and cardiac dilation in Drosophila

Dilated cardiomyopathy (DCM), a life-threatening disease characterized by pathological heart enlargement, can be caused by myosin mutations that reduce contractile function. To better define the mechanistic basis of this disease, we employed the powerful genetic and integrative approaches available in Drosophila melanogaster. To this end, we generated and analyzed the first fly model of human myosin–induced DCM. The model reproduces the S532P human β-cardiac myosin heavy chain DCM mutation, which is located within an actin-binding region of the motor domain. In concordance with the mutation’s location at the actomyosin interface, steady-state ATPase and muscle mechanics experiments revealed that the S532P mutation reduces the rates of actin-dependent ATPase activity and actin binding and increases the rate of actin detachment. The depressed function of this myosin form reduces the number of cross-bridges during active wing beating, the power output of indirect flight muscles, and flight ability. Further, S532P mutant hearts exhibit cardiac dilation that is mutant gene dose–dependent. Our study shows that Drosophila can faithfully model various aspects of human DCM phenotypes and suggests that impaired actomyosin interactions in S532P myosin induce contractile deficits that trigger the disease.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

A 2-component blend of coconut oil-derived fatty acids as an oviposition deterrent against Drosophila suzukii (Drosophilidae: Diptera)

Abstract Coconut free fatty acid (CFFA), a mixture of 8 fatty acids derived from coconut oil, is an effective repellent and deterrent against a broad array of hematophagous insects. In this study, we evaluated the oviposition deterrent activity of CFFA on spotted-wing drosophila (SWD; Drosophila suzukii), a destructive invasive pest of berries and cherries, and identified bioactive key-deterrent compounds. In laboratory 2-choice tests, CFFA deterred SWD oviposition in a dose-dependent manner with the greatest reduction (99%) observed at a 20-mg dose compared with solvent control. In a field test, raspberries treated with 20-mg CFFA received 64% fewer SWD eggs than raspberries treated with the solvent control. In subsequent laboratory bioassays, 2 of CFFA components, caprylic and capric acids, significantly reduced SWD oviposition by themselves, while 6 other components had no effect. In choice and no-choice assays, we found that a blend of caprylic acid and capric acid, at equivalent concentrations and ratio as in CFFA, was as effective as CFFA, while caprylic acid or capric acid individually were not as effective as the 2-component blend or CFFA at equivalent concentrations, indicating the 2 compounds as the key oviposition deterrent components for SWD. The blend was also as effective as CFFA for other nontarget drosophilid species in the field. Given that CFFA compounds are generally regarded as safe for humans, CFFA and its bioactive components have potential application in sustainably reducing SWD damage in commercial fruit operations, thereby reducing the sole reliance on insecticides.

Entomology↗
DOE OSTI2020

On the possibility of baryon acoustic oscillation measurements at redshift z > 7.6 with the Roman space telescope

ABSTRACT The Nancy Grace Roman Space Telescope (RST), with its field of view and high sensitivity will make surveys of cosmological large-scale structure possible at high redshifts. We investigate the possibility of detecting baryon acoustic oscillations (BAO) at redshifts z > 7.6 for use as a standard ruler. We use data from the hydrodynamic simulation bluetides in conjunction with the gigaparsec-scale Outer Rim simulation and a model for patchy reionization to create mock RST High Latitude Survey grism data for Lyman α emission line selected galaxies at redshifts z = 7.4 to z = 10, covering 2280 deg2. We measure the monopoles of galaxies in the mock catalogues and fit the BAO features. We find that for a line flux of $L = 7\times 10^{-17} \ {\rm erg\, s^{-1}\, cm}^{-2}$, the 5σ detection limit for the current design, the BAO feature is partially detectable (measured in three out of four survey quadrants analysed independently). The resulting root mean square error on the angular diameter distance to z = 7.7 is 7.9 ${{\ \rm per\ cent}}$. If we improve the detection sensitivity by a factor of two (i.e. $L = 3.5\times 10^{-17} \ {\rm erg\, s^{-1}\, cm}^{-2}$), the distance error reduces to $1.4{{\ \rm per\ cent}}$. We caution that many more factors are yet to be modelled, including dust obscuration, the damping wing due to the intergalactic medium, and low redshift interlopers. If these issues do not strongly affect the results, or different observational techniques (such as use of multiple lines) can mitigate them, RST, or similar instruments may be able to constrain the angular diameter distance to the high redshift universe.

79 ASTRONOMY AND ASTROPHYSICS↗