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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 109 records · Page 6

Exploring Camelina sativa lipid metabolism regulation by combining gene co-expression and DNA affinity purification analyses

Camelina (Camelina sativa) is an annual oilseed plant that is gaining momentum as a biofuel cover crop. Understanding gene regulatory networks is essential to deciphering plant metabolic pathways, including lipid metabolism. Furthermore, we take advantage of a growing collection of gene expression datasets to predict transcription factors (TFs) associated with the control of Camelina lipid metabolism. We identified approximately 350 TFs highly co-expressed with lipid-related genes (LRGs). These TFs are highly represented in the MYB, AP2/ERF, bZIP, and bHLH families, including a significant number of homologs of well-known Arabidopsis lipid and seed developmental regulators. After prioritizing the top 22 TFs for further validation, we identified DNA-binding sites and predicted target genes for 16 out of the 22 TFs tested using DNA affinity purification followed by sequencing (DAP-seq). Enrichment analyses of targets supported the co-expression prediction for most TF candidates, and the comparison to Arabidopsis revealed some common themes, but also aspects unique to Camelina. Within the top potential lipid regulators, we identified CsaMYB1, CsaABI3AVP1-2, CsaHB1, CsaNAC2, CsaMYB3, and CsaNAC1 as likely involved in the control of seed fatty acid elongation and CsaABI3AVP1-2 and CsabZIP1 as potential regulators of the synthesis and degradation of triacylglycerols (TAGs), respectively. Altogether, the integration of co-expression data and DNA-binding assays permitted us to generate a high-confidence and short list of Camelina TFs involved in the control of lipid metabolism during seed development.

59 BASIC BIOLOGICAL SCIENCES↗

AmeriFlux US-RGo Glenn County Organic Rice Farm

This is the AmeriFlux version of the carbon flux data for the site US-RGo Glenn County Organic Rice Farm. Site Description - Organically farmed medium-grain brown rice field in Glenn County, California. Part of a five-year, ground-truthing field study under the DOE ARPA-E SMARTFARM project. Field check is approx. 7 ha in size (1,250 ft by 250 ft), part of a 75+ acre site in several checks with commercial rice over rice rotation on Tehama silt loam, management practices include winter cover crops and AWD.

Schuppenhauer, Michael R.↗

AmeriFlux FLUXNET-1F US-RGo Glenn County Organic Rice Farm

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-RGo Glenn County Organic Rice Farm. This is the FLUXNET version of the carbon flux data for the site US-RGo Glenn County Organic Rice Farm produced by applying the standard ONEFlux (1F) software. Site Description - Organically farmed medium-grain brown rice field in Glenn County, California. Part of a five-year, ground-truthing field study under the DOE ARPA-E SMARTFARM project. Field check is approx. 7 ha in size (1,250 ft by 250 ft), part of a 75+ acre site in several checks with commercial rice over rice rotation on Tehama silt loam, management practices include winter cover crops and AWD.

Schuppenhauer, Michael R.↗

AmeriFlux US-CLN Coles Farm North

This is the AmeriFlux version of the carbon flux data for the site US-CLN Coles Farm North. Site Description - The land was given to Iowa State University in 1974, and was a corn-soybean rotation with conventional tillage operation until 2015. In 2016, the management was moved to strip tillage corn-soybean rotation with cover crops. The field is located east of Williams, IA.

Neale, Christopher [Daugherty Water for Food Insti↗

AmeriFlux US-CLS Coles Farm South

This is the AmeriFlux version of the carbon flux data for the site US-CLS Coles Farm South. Site Description - The land was given to Iowa State University in 1974, and was a corn-soybean rotation with conventional tillage operation until 2015. In 2016, the management was moved to strip tillage corn-soybean rotation with cover crops. The field is located east of Williams, IA.

Prueger, John H. [National Laboratory for Agricult↗

AmeriFlux FLUXNET-1F US-RC5 Moses Lake on-farm site

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-RC5 Moses Lake on-farm site. This is the FLUXNET version of the carbon flux data for the site US-RC5 Moses Lake on-farm site produced by applying the standard ONEFlux (1F) software. Site Description - The Moses Lake On-farm site operated 2013-2015 as part of a cluster of 5 towers (RC1 to RC5) operated for the Regional Approaches to Climate Change (REACCH) USDA-supported research project. The field was a half-circle irrigated plot with the irrigation pivot located on the edge of the field and the flux tower located next to the center of the pivot. The field was in wheat from tower establishment in June 2013 to harvest in August 2013. A cover crop of arugula and mustard was grown from August to October 2013. Potatoes were grown April to August 2014 and wheat (a spring cultivar planted in fall) was grown October 2014 to June 2015. Soils are coarse sandy loam mollisols in the Timmerman series. The site topography is flat.

Chi, Jinshu [The Hong Kong University of Science a↗

AmeriFlux US-LMS LMRB LTAR Schmidt Farm

This is the AmeriFlux version of the carbon flux data for the site US-LMS LMRB LTAR Schmidt Farm. Site Description - Agricultural field in MS Delta with cover crops and minimal tillage

Witthaus, Lindsey [USDA ARS]↗

Deeply Rooted: Evaluating Plant Rooting Depth as a Means for Enhanced Soil Carbon Sequestration (Full Technical Report)

Soils store three times as much carbon (C) as the atmosphere, but are not at capacity, and enhanced soil C storage is considered an essential strategy to mitigate rising atmospheric CO 2 levels. Agricultural soils have experienced substantial C loss in the past century due to poor agricultural practices and erosion. A shift towards deep-rooting crops and low-impact soil management could potentially increase long-term sequestration of C fixed by plants and stored in their root tissues, particularly for crops that have naturally deep root systems (>1 meter). A substantial amount of the CO 2 taken up by plants is allocated to their root systems, and because C deposited in deep soil layers has a longer residence time (up to millennia, in contrast to C deposited in topsoils), C increases at depth may have better long-term C sequestration potential than topsoils. However, the accrual, turnover, and stabilization of C in subsoils is a critical knowledge gap. We investigated a deeply rooted plant, switchgrass (Panicum virgatum), as a means of increasing carbon stocks in marginal and agricultural soils. We hypothesized that deep (>30 cm) SOC stocks would be greater under bioenergy crops relative to stocks under shallow-rooted conventional crop cover. To test this hypothesis, we compared soil depth profiles beneath deeply rooted switchgrass (cultivated for 4-30 years) and paired shallowrooted annual controls. We studied 12 field sites, 3 that were collected in 2018 before the start of the project as part a Department of Energy (DOE) Sustainable Biofuels study, and 9 that we collected in 2019 on a national field sampling campaign across the eastern US. In our publication from the 2018 study, which was written in collaboration with the LLNL Soil Microbiome Scientific Focus Area (SFA), we found that C stocks increased under switchgrass, but that the increases were dependent on soil texture. In the 2019 study, we found that carbon accrual tended to occur most consistently in low C soil in the southern US, which could indicate that perennial grasses may be a viable strategy to increase SOC in marginals soils in this region. We have published two studies from the 2019 sampling campaign thus far, we measured microbial growth parameters that will aid in modeling subsoil carbon cycling, and we found that switchgrass appears to move water upward in the soil profile and could promote drought tolerance, which a phenomenon commonly performed by trees known as ‘hydraulic redistribution;’ our study is the first to show this can occur in deep-rooted grasses. Finally, we published a modeling paper in collaboration with the LLNL Soil Microbiome SFA, where we found that poorly crystalline minerals are abundant and strongly correlated with organic C in geographically limited zones with enhanced weathering rates. Our results will inform technological development in the agricultural carbon sequestration sector as well as future negative emissions policies.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗

CRISPR/Cas9-Induced fad2 and rod1 Mutations Stacked With f ae1 Confer High Oleic Acid Seed Oil in Pennycress (Thlaspi arvense L.)

Pennycress (Thlaspi arvense L.) is being domesticated as an oilseed cash cover crop to be grown in the off-season throughout temperate regions of the world. With its diploid genome and ease of directed mutagenesis using molecular approaches, pennycress seed oil composition can be rapidly tailored for a plethora of food, feed, oleochemical and fuel uses. Here, we utilized Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/Cas9 technology to produce knockout mutations in the FATTY ACID DESATURASE2 (FAD2) and REDUCED OLEATE DESATURATION1 (ROD1) genes to increase oleic acid content. High oleic acid (18:1) oil is valued for its oxidative stability that is superior to the polyunsaturated fatty acids (PUFAs) linoleic (18:2) and linolenic (18:3), and better cold flow properties than the very long chain fatty acid (VLCFA) erucic (22:1). When combined with a FATTY ACID ELONGATION1 (fae1) knockout mutation, fad2 fae1 and rod1 fae1 double mutants produced ~90% and ~60% oleic acid in seed oil, respectively, with PUFAs in fad2 fae1 as well as fad2 single mutants reduced to less than 5%. MALDI-MS spatial imaging analyses of phosphatidylcholine (PC) and triacylglycerol (TAG) molecular species in wild-type pennycress embryo sections from mature seeds revealed that erucic acid is highly enriched in cotyledons which serve as storage organs, suggestive of a role in providing energy for the germinating seedling. In contrast, PUFA-containing TAGs are enriched in the embryonic axis, which may be utilized for cellular membrane expansion during seed germination and seedling emergence. Under standard growth chamber conditions, rod1 fae1 plants grew like wild type whereas fad2 single and fad2 fae1 double mutant plants exhibited delayed growth and overall reduced heights and seed yields, suggesting that reducing PUFAs below a threshold in pennycress had negative physiological effects. Taken together, our results suggest that combinatorial knockout of ROD1 and FAE1 may be a viable route to commercially increase oleic acid content in pennycress seed oil whereas mutations in FAD2 will likely require at least partial function to avoid fitness trade-offs.

09 BIOMASS FUELS↗

Airborne Oceanographic Lidar System

The Airborne Oceanographic Lidar (AOL), a spatially scanning range-gated device installed on board a NASA C-54 aircraft, is described. The AOL system is capable of measuring topographical relief or water depth (bathymetry) with a range resolution of plus or minus 0.3 m in the vertical dimension. The system may also be used to measure fluorescent spectral signatures from 3500 to 8000 A with a resolution of 100 A. Potential applications of the AOL, including sea state measurements, water transparency assessments, oil spill identification, effluent identification and crop cover assessment are also mentioned.

Bressel, C.↗

Field measurement of reflectance - Some major considerations

The simultaneous use of two portable spectroradiometers to measure radiance and irradiance from crop fields is reported. Two sensors were employed to assess the crop cover radiance reflectance, while a third instrument measured irradiance from a white Lambertian reflectance target, with all radiometers being equipped with optic fiber probes. Calibration procedures for the instruments are outlined, including the usage of laboratory standards and recalibration before every test by exposing all sensors to the Lambertian reflector. Calculation of the angular geometry between the sun, target, and sensor was found to be necessary to determine the angle dependence for each wave band and the surface variability. It is recommended that suitable portable equipment be fabricated with calibration procedures and manuals that can be used by the nonelectrical engineer in order to standardize measurements for comparison between two instruments.

Duggin, M. J.↗

Spectral characteristics and the extent of paleosols of the Palouse formation

The objective of this study is to test the hypothesis that TM data is adequate in band selection and width and in spatial resolution to distinguish soil organic matter, iron oxide, and lime-silica contents to map several severity classes of erosion in soils of the Palouse region. The methodology used is as follows: (1) To develop spectral relationships from TM data that define the spatial distribution of soil areas by levels of (1) organic matter in the surface soil, (2) iron oxide and clay in exposed paleosol B horizons, and (3) lime-silica accumulations in exposed paleosol B horizons; (2) To compare areas determined by the method outlined in 1 to patterns interpreted from color aerial photos, and to ground observations on bare-soil fields; and (3) To define, on the basis of results of 1 and 2 to the extent possible, where exposed paleosols exist within fields that are not bare, but have a crop cover, and the distribution of desirable and undesirable soil properties in each field.

Frazier, B. E.↗

Synergistic use of active and passive microwave in soil moisture estimation

Data gathered during the MACHYDRO experiment in central Pennsylvania in July 1990 have been utilized to study the synergistic use of active and passive microwave systems for estimating soil moisture. These data sets were obtained during an eleven-day period with NASA's Airborne Synthetic Aperture Radar (AIRSAR) and Push-Broom Microwave Radiometer (PBMR) over an instrumented watershed which included agricultural fields with a number of different crop covers. Simultaneous ground truth measurements were also made in order to characterize the state of vegetation and soil moisture under a variety of meteorological conditions. A combination algorithm is presented as applied to a representative corn field in the MACHYDRO watershed.

O'Neill, P.↗

Improved Hypoxia Modeling for Nutrient Control Decisions in the Gulf of Mexico

As required by the Harmful Algal Bloom and Hypoxia Research Control Act of 1998, the Mississippi River/Gulf of Mexico Watershed Nutrient Task Force issued the 2001 Gulf Hypoxia Action Plan (updated in 2008). In response to the Gulf Hypoxia Action Plan of 2001 (updated in 2008), the EPA Gulf of Mexico Hypoxia Modeling and Monitoring Project has established a detailed model for the Mississippi-Attchafalaya River Basin which provides a capability to forecast the multi-source nutrient loading to the Gulf and the subsequent bio-geochemical processes leading to hypoxic conditions and subsequent effects on Gulf habitats and fisheries. The primary purpose of the EPA model is to characterize the impacts of nutrient management actions, or proposed actions on the spatial and temporal characteristics of the Gulf hypoxic zone. The model is expected to play a significant role in determining best practices and improved strategies for incentivizing nutrient reduction strategies, including installation of on-farm structures to reduce sediment and nutrient runoff, use of cover crops and other agricultural practices, restoration of wetlands and riparian buffers, improved waste water treatment and decreased industrial nitrogen emissions. These decisions are currently made in a fragmented way by federal, state, and local agencies, using a variety of small scale models and limited data. During the past three years, EPA has collected an enormous amount of in-situ data to be used in the model. We believe that the use of NASA satellite data products in the model and for long term validation of the model has the potential to significantly increase the accuracy and therefore the utility of the model for the decision making described above. This proposal addresses the Gulf of Mexico Alliance (GOMA) priority issue of reductions in nutrient inputs to coastal ecosystem. It further directly relates to water quality for healthy beaches and shellfish beds and wetland and coastal conservation restoration.

Habib, Shaid↗

Goddard DEVELOP Students: Using NASA Remote Sensing Technology to Study the Chesapeake Bay Watershed

The DEVELOP National Program is an Earth Science research internship, operating under NASA s Applied Sciences Program. Each spring, summer, and fall, DEVELOP interns form teams to investigate Earth Science related issues. Since the Fall of 2003, Goddard Space Flight Center (GSFC) has been home to one of 10 national DEVELOP teams. In past terms, students completed a variety of projects related to the Applied Sciences Applications of National Priority, such as Public Health, Natural Disasters, Water Resources, and Ecological Forecasting. These projects have focused on areas all over the world, including the United States, Africa, and Asia. Recently, Goddard DEVELOP students have turned their attention to a local environment, the Chesapeake Bay Watershed. The Chesapeake Bay Watershed is a complex and diverse ecosystem, spanning approximately 64,000 square miles. The watershed encompasses parts of six states: Delaware, Maryland, New York, Pennsylvania, Virginia, and West Virginia, as well as the District of Columbia. The Bay itself is the biggest estuary in the United States, with over 100,000 tributaries feeding into it. The ratio of fresh water to salt water varies throughout the Bay, allowing for a variety of habitats. The Bay s wetlands, marshes, forests, reefs, and rivers support more than 3,600 plant and animal species, including birds, mammals, reptiles, amphibians, fish, and crabs. The Bay is also commercially significant. It is ranked third in the nation in fishery catch, and supplies approximately 500 million pounds of seafood annually. In addition to its abundant flora and fauna, the Chesapeake Bay watershed is home to approximately 16.6 million people, who live and work throughout the watershed, and who use its diverse resources for recreational purposes. Over the past several decades, the population throughout the watershed has increased rapidly, resulting in land use changes, and ultimately decreasing the health of the Chesapeake Bay Watershed. Over the course of 2009-2010, student teams carried out two independent research projects focused on the Chesapeake Bay Watershed. The first investigated the threat of invasive species to forests in Maryland. The second investigated the detection of winter cover crops throughout the watershed from satellite data.

Moore, Rachel↗

Multispectral determination of vegetative cover in corn crop canopy

The relationship between different amounts of vegetative ground cover and the energy reflected by corn canopies was investigated. Low altitude photography and an airborne multispectral scanner were used to measure this reflected energy. Field plots were laid out, representing four growth stages of corn. Two plot locations were chosen-on a very dark and a very light surface soil. Color and color infrared photographs were taken from a vertical distance of 10 m. Estimates of ground cover were made from these photographs and were related to field measurements of leaf area index. Ground cover could be predicted from leaf area index measurements by a second order equation. Microdensitometry and digitzation of the three separated dye layers of color infrared film showed that the near infrared dye layer is most valuable in ground cover determinations. Computer analysis of the digitized photography provided an accurate method of determining precent ground cover.

Stoner, E. R.↗

Measurement of the fluorescence of crop residues: A tool for controlling soil erosion

Management of crop residues, the portion of a crop left in the field after harvest, is an important conservation practice for minimizing soil erosion and for improving water quality. Quantification of crop residue cover is required to evaluate the effectiveness of conservation tillage practices. Methods are needed to quantify residue cover that are rapid, accurate, and objective. The fluorescence of crop residue was found to be a broadband phenomenon with emission maxima at 420 to 495 nm for excitations of 350 to 420 nm. Soils had low intensity broadband emissions over the 400 to 690 nm region for excitations of 300 to 600 nm. The range of relative fluorescence intensities for the crop residues was much greater than the fluorescence observed of the soils. As the crop residues decompose their blue fluorescence values approach the fluorescence of the soil. Fluorescence techniques are concluded to be less ambiguous and better suited for discriminating crop residues and soils than reflectance methods. If properly implemented, fluorescence techniques can be used to quantify, not only crop residue cover, but also photosynthetic efficiency in the field.

Daughtry, C. S. T.↗