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DOE OSTI2026

Data from: Lowland Tropical Forests Remain a Methane Sink Under Warming and Long-Term Hurricane Disturbance Recovery

The repository folder contains spreadsheets and script for soil greenhouse gas (GHG) fluxes, soil moisture, soil temperature, air temperature, and precipitation measurements collected from the Tropical Responses to Altered Climate Experiment (TRACE) at the Sabana Research Field Station, El Yunque National Forest (USDA Forest Service; 18°19′28.74″ N, 65°43′50.09″ W) — an open-air field warming experiment located in a lowland tropical forest in Puerto Rico within the Luquillo Experimental Forest (LEF) — six to seven years after Hurricanes Irma and Maria (2017). All spreadsheets for soil and air microclimate data, as well as soil greenhouse gas data, are included as csv files. Air temperature data are also included as Excel spreadsheets (.xlsx). The script is built in R Studio, which is the only software required to run data analysis. This dataset is associated with the manuscript “Larocca Conte G ; Zuvela L ; Cruz-Pérez R ; Barreto-Vélez T ; Becerra-Santillan N ; Campbell S ; Chu H ; Dam T ; Grullón-Penkova I ; Kleit M ; Ortiz-Iglesias D ; Rubio-Lebrón L ; Cavaleri M ; Reed S ; Sihi D ; Wood T ; O'Connell C., 2026. Lowland Tropical Forests Remain a Methane Sink Under Warming and Long-Term Hurricane Disturbance Recovery. Agricultural and Forest Meteorology. In review". The dataset was used to test the effect of warming on soil CH4 dynamics following long-term legacy effects of hurricane disturbance. The dataset includes: - An overall README file in word and pdf format describing methodology and spreadsheets’ structure. - Continuous measurements of soil temperature and moisture from January 2023 to July 2024 measured with Campbell CS655 probes (“TRACE_soil_temperature_and_moisture_2023_cleaned(in).csv” and “TRACE_soil_temperature_and_moisture_2024_cleaned. csv”). - Air temperature data measured with a HOBO MX23O1A data logger (“Hobo air temperature 2023 Sep 2024” and “Hobo air temperature 2023 Sep 2024” – “CSV FILES folders”). - Precipitation data from a nearby weather tower downloaded from González et al. (2025; “sabana_2020-2025.csv”). - Soil CH4 and CO2 effluxes measured intermittently in two summer campaigns (June – August 2023 and June – July 2024) with a LI-COR 8200-01S Portable Smart Chamber coupled with a LI-COR LI-7810 CH4/ CO2/H2O Trace Gas Analyzer (“23_24COMBO2.0.csv”). - R markdown script for data analysis (“Trace new_PLOTS.Rmd”).

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2026

Model Data Archive Associated with Manuscript "Fire-altered Carbon Pools Create Disturbance Memory in Stream Dissolved Organic Carbon"

This data package supports the publication “Fire-altered Carbon Pools Create Disturbance Memory in Stream Dissolved Organic Carbon” by Li et al. (2026). The package contains processed model inputs, configuration files, restart files, simulation outputs, scripts, and visualization products used to evaluate post-fire dissolved organic carbon (DOC) dynamics in the Naches River Watershed, Washington, USA, following the 2021 Schneider Springs Fire. The modeling workflow couples ELM-BGC, the biogeochemistry-enabled Energy Exascale Earth System Model Land Model; ATS, the Advanced Terrestrial Simulator for integrated surface-subsurface hydrology; and PFLOTRAN, a reactive transport model for multicomponent aqueous geochemistry. Together, these models simulate how wildfire-induced changes in vegetation, litter, coarse woody debris, and soil organic matter influence DOC production, transport, and reaction from burned hillslopes to stream networks. The archive includes preprocessed meteorological, geospatial, hydrologic, and biogeochemical forcing data; ELM-BGC-derived DOC source terms; ATS mesh files; PFLOTRAN reactive-transport inputs; model configuration files; spin-up and transient restart files; watershed-scale diagnostic outputs; stream concentration time series; and figures or visualization files used to inspect and reproduce key results. File types include Hierarchical Data Format 5 (HDF5) files for gridded forcing and model-coupling data, model input and configuration files for ELM-BGC, ATS, and PFLOTRAN, restart and simulation-output files generated by the modeling workflow, tabular or time-series diagnostic outputs, scripts for post-processing and figure generation, and image or visualization products associated with the manuscript. Use of the package depends on the intended task. Re-running the simulations requires the relevant modeling software, including ELM-BGC, ATS, and PFLOTRAN as ATS's geochemical engine. Inspecting outputs and reproducing figures requires Python with scientific plotting libraries such as Matplotlib, and three-dimensional model outputs may be viewed with ParaView. Geographic information system files or maps may be inspected with ArcGIS Pro or comparable GIS software. The data package is intended to enable traceability, reuse, and partial reproduction of the coupled land-to-watershed hydro-biogeochemical modeling workflow used to test how wildfire disturbance affects terrestrial carbon pools and downstream DOC dynamics.

ATS↗

DOE OSTI2022

Amazon windthrow disturbances are likely to increase with storm frequency under global warming: Data and Codes

This zipfile includes datasets and codes that were used to produce the results in the paper entitled Amazon windthrow disturbances are likely to increase with storm frequency under global warming. Datasets include: 1. Windthrow density across the entire Amazon - GIS shapefile format 2. Current ERA 5 mean afternoon convective available potential energy (CAPE) (1990-2019) - Remote Sensing TIFF format 3. Estimated future mean CAPE from 10 models in CMIP 6 (2070-2099) - Remote Sensing TIFF format 4. Python codes in jupyter notebook and processed datasets used to generate Fig.2a and Table 1 in the paper. You will need to use Jupyter Notebook and Python for accessing and reading the codes. Please contact Yanlei Feng (ylfeng@berkeley.edu) for any questions. Paper associated with this dataset: Feng, Y., Negrón-Juárez, R.I., Romps, D.M. and Chambers, J.Q., 2023. Amazon windthrow disturbances are likely to increase with storm frequency under global warming. Nature communications, 14(1), p.101.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2020

Momentary Cessation: Improving Dynamic Performance and Modeling of Utility-Scale Inverter Based Resources During Grid Disturbances

Sandia National Laboratories worked with NERC staff to provide stakeholder guidance in responding to a May 2018 NERC alert regarding dynamic performance and modeling issues for utility-scale inverter-based resources. The NERC alert resulted from event analyses for grid disturbances that occurred in southern California in August 2016 and October 2017. Those disturbances revealed the use of momentary cessation of transmission connected inverter-based generation- a short time period when they ceased to inject current into the grid, counter to desired transmission operation. The event analyses concluded that, in many cases, the Western Interconnection system models used to determine planning and operating criteria do not reflect the actual behavior of solar plants, resulting in overly optimistic planning assessments and substandard operational responses. This technical report summarizes the gaps between the models and actual performance that were observed at those times, and the guidance that Sandia and NERC provided to owners of solar PV power plants, transmission planners, transmission operators and planning/reliability coordinators to modify existing models to reflect that actual performance

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2023

Disturbance Propagation Stability in Droop-Controlled Microgrids

The disturbance response of the angle dynamics for a droop-controlled islanded microgrid is characterized. Specifically, a notion of propagation stability is defined, which is concerned with spatial attenuation vs amplification of input- output responses in the network in a H8 or H2 sense. Criteria for propagation stability are developed, phrased in terms of the microgrid’s inverter control parameters. The input frequency range over which the network is susceptible to amplification is also characterized, in the case that the criteria are not met. Based on the formal analysis, a the design of resilient controls that trade off coherence and disturbance propagation goals is briefly conceptualized. Finally, the propagation stability analysis is illustrate using a 15-bus example microgrid network.

Roy, Sandip↗

DOE OSTI2021

Detecting and Analyzing Power System Disturbances in PMU Data with the Open-Source Archive Walker Tool

As the number of Phasor Measurement Units (PMUs) deployed in power systems increases, so do the archives of synchrophasor measurements stored by utilities. Significant value can be extracted from these archives by using them to support studies such as frequency response analysis, small-signal stability analysis, and power plant model validation. To better enable utilities to perform these studies, the open-source Archive Walker tool was developed. This tool examines PMU data for grid disturbances and periods of interest. Once identified, the data can be further analyzed inside Archive Walker or exported to specialty tools. In this paper, the various disturbance detectors available in Archive Walker are described, and its interactions with other openly-available tools are highlighted.

Follum, James D.↗

DOE OSTI2023

Handling gait disturbances with asynchronous timing

An example method may include i) detecting a disturbance to a gait of a robot, where the gait includes a swing state and a step down state, the swing state including a target swing trajectory for a foot of the robot, and where the target swing trajectory includes a beginning and an end; and ii) based on the detected disturbance, causing the foot of the robot to enter the step down state before the foot reaches the end of the target swing trajectory.

Blankespoor, Kevin↗

DOE OSTI2025

Frequency Control and Disturbance Containment Using Grid-Forming Embedded Storage Networks

The paper presents a distributed approach for operating a network of inverter-based energy storage resources embedded in a bulk power system. Departing from their traditional role of steady-state reserves, the storage assets in the network are utilized as frequency-responsive resources shaping system dynamics. The power electronics converter systems interfacing the storage resources are equipped with local controllers designed to respond under transient disturbances. To this end, a safety-constrained distributed control strategy is explored. The paper compares the performance of converter-interfaced grid-forming and grid-following storage networks for fast frequency control and disturbance containment/localization. Sensitivity studies are performed to study the impact of storage size, steady-state dispatch, and controller design on dynamic performance. The findings are presented through case studies with results from the IEEE test systems.

Chatterjee, Kaustav (ORCID:0000000153273860)↗

DOE OSTI2021

Disturbance-accelerated succession increases the production of a temperate forest

Many secondary deciduous forests of eastern North America are approaching a transition in which maturing early successional tree species are declining, resulting in an uncertain future for these forests’ century-long carbon (C) sink. We initiated the Forest Accelerated Succession Experiment (FASET) at the University of Michigan Biological Station to examine the patterns and mechanisms underlying forest C cycling following the stem-girdling induced mortality of >6,700 early successional Populus spp. (aspen) and Betula papyrifera (paper birch). Since 2008, meteorological flux tower-based C cycling observations from the 33-ha treatment forest have been paired with those from a nearby unmanipulated forest. Following over a decade of observations, herein we revisit our core hypothesis: that net ecosystem production (NEP) would increase following the transition to mid-late successional species dominance due to increased canopy structural complexity. Supporting our hypothesis, NEP was stable, briefly declined, and then increased relative to the control in the decade following disturbance; however, increasing NEP was not associated with rising structural complexity but rather the rapid 1-year recovery of total LAI as mid-late successional Acer, Quercus, and Pinus assumed canopy dominance. The transition to mid-late successional species dominance improved carbon-use efficiency (CUE = NEP/gross primary production) as ecosystem respiration declined. Similar soil respiration rates in control and treatment forests, along with species differences in leaf physiology and the rising relative growth rates of mid-late successional species in the treatment forest, suggest changes in aboveground plant respiration and growth, respectively, were primarily responsible for increases in NEP. We conclude that deciduous forests transitioning from early to middle succession are capable of sustained or increased NEP, even when experiencing extensive tree mortality. This adds to mounting evidence that aging deciduous forests in the region will function as C sinks for decades to come.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Mitigating the Impacts of Uncertain Geomagnetic Disturbances on Electric Grids: A Distributionally Robust Optimization Approach

Severe geomagnetic disturbances (GMDs) increase the magnitude of the electric field on the Earth’s surface (E-field) and drive geomagnetically-induced currents (GICs) along the transmission lines in electric grids. These additional currents can pose severe risks, such as current distortions, transformer saturation and increased reactive power losses, each of which can lead to system unreliability. Today several mitigation actions (e.g., changing grid topology) exist that can reduce the harmful GIC effects on the grids. Making such decisions can be challenging, however, because the magnitude and direction of the E-field are uncertain and non-stationary. In this paper, we model uncertain E-fields using the distributionally robust optimization (DRO) approach that determines optimal transmission grid operations such that the worst-case expectation of the system cost is minimized. We also capture the effect of GICs on the nonlinear AC power flow equations. For solution approaches, we develop an accelerated column-and-constraint generation (CCG) algorithm by exploiting a special structure of the support set of uncertain parameters representing the E-field. Extensive numerical experiments based on “epri-21” and “uiuc-150” systems, designed for GMD studies, demonstrate (i) the computational performance of the accelerated CCG algorithm, (ii) the superior performance of distributionally robust grid operations that satisfy nonlinear, nonconvex AC power flow equations and GIC constraints, in comparison with standard stochastic programming-based methods during the out-of-sample testing.

42 ENGINEERING↗

DOE OSTI2020

Frequency Disturbance Event Detection Based on Synchrophasors and Deep Learning

Power system frequency disturbances are caused by various generation and transmission events including generator trips, load disconnections, line trips, etc. Accurate detections of the events are crucial to bulk power system situation awareness and event investigation. This paper utilizes the recent advances of deep learning to build a convolutional neural network model to detect events in an accurate yet straightforward manner. Herein, the rate of change of frequency and the relative angle shift are converted to images as the inputs of the proposed model. Finally, this paper uses two convolutional neural networks and classifier fusion to achieve the detection result. Compared with the conventional event detection algorithm and the frequency only deep learning model, the proposed model improves the detection accuracy by over 48%. As a promising tool for bulk power system situation awareness, the proposed model requires a short decision time, which is suitable for practical scenarios.

42 ENGINEERING↗

DOE OSTI2026

Lidar Measurements and High-Resolution Mesoscale Modeling of Coastally Trapped Disturbances off the Coast of California

Coastally Trapped disturbances (CTDs) are shifts in wind direction from the pre-dominant direction to equatorward to poleward for a period of time. These CTDs occur during the warm season off the California coast and impact coastal weather conditions and planned offshore wind plants. This study assesses the characteristics of CTD events as observed by lidar and other offshore buoys, then evaluates the ability of modeling systems to capture the correct characteristics, leveraging model output from the High-Resolution Rapid Refresh (HRRR) operational modeling system and the NOW-23 (National Offshore Wind) model dataset. CTDs were analyzed for October 2020 and May through to October of 2021, identifying 18 unique CTD events, confirmed by a nearby National Data Buoy Center (NDBC) buoy. The HRRR model captured most of these events, but the NOW-23 model output contained only 12 events. Composites of the wind, temperature, and pressure perturbations pre-, during, and post-event demonstrated the diminishment in wind speed, particularly for the alongshore component. Although the NOW-23 model captured the alongshore wind component and pressure perturbations well, the cross-shore wind component and temperature perturbations varied substantially. When the turbulent kinetic energy deviation and wind shear was positive across all levels pre-event, the NOW-23 modeling system was less likely to capture the CTD event. In contrast, the events that were captured by the model tended to have negative wind shear aloft pre-event.

coastal meteorology↗

DOE OSTI2026

Spatiotemporal 4D Whole-cell Modeling of a Minimal Autotroph Reveals Central Carbon Metabolism Regulated Locally by Protein Megacomplexes via Post-translational Modifications under Light Disturbance

Photosynthetic microorganisms rely on multiple pathways in central carbon metabolism to adapt to fluctuating light and energy availability across diel cycles. Mechanistic insight into the regulatory dynamics of this adaptation requires integrating processes spanning disparate timescales, from rapid redox-dependent post-translational modifications (PTMs) to slower changes in protein expression and metabolic pathway usage. To address this complexity beyond genome-based inference and traditional modeling, we develop a whole-cell four-dimensional (3D + time) model of the marine cyanobacterium Prochlorococcus marinus MED4 that explicitly represents the spatial organization of enzymatic and molecular processes in central carbon metabolism under light perturbation. We employ a perturbation-based research design to experimentally generate time-series, multi-omics measurements that provide molecular descriptors and cryo-ET derived 3D segmented volumes as constraints for this dynamic 4D framework. The integration of experiments and modeling across defined light regimes enables quantitative validation of system-level responses and forecasting under distinct light disturbances. We test the hypothesis that light-dependent redox PTMs regulating the structural assembly of a protein megacomplex, the “dark complex,” modulate metabolic flux at a conserved regulatory node of the Calvin–Benson cycle (CBC) in cyanobacteria. Our model shows that subcellular spatial organization buffers rapid light-induced changes in thylakoid reaction rates, which are followed by redox-PTM-mediated sequestration or release of CBC enzymes in the dark complex, ultimately impacting carbon fixation dynamics within carboxysomes. Comparison with an equivalently parameterized well-mixed stochastic model demonstrates that post-translational regulation not only buffers transcriptional noise and diffusion-driven fluctuations but also stabilizes phenotypic outcomes, underscoring the importance of spatial heterogeneity in phenotypic robustness. This ability to probe adaptive, spatiotemporally resolved mechanisms in photosynthetic machinery and central carbon metabolism addresses a critical gap in genotype-to-phenotype inference and expands modeling and design capabilities for understudied or genetically intractable autotrophs such as P. marinus MED4.

Johnson, Connah G.↗

DOE OSTI2023

Profiling overstory survival trends following varying thinning and burning disturbance regimes in a mixed pine-hardwood forest in the US South

Prescribed burning as a silvicultural tool may be effective for achieving various management objectives, yet some practitioners have concerns about inadvertently increasing overstory tree mortality. Using extensive data from a long-term, ongoing study in northcentral Alabama, USA, that systematically applies a variety of thinning and prescribed burning disturbances on mixed pine-hardwood stands, we assess survival trends for different groups of trees. The primary research question is whether more frequent prescribed burns adversely affects overstory survival versus infrequent or no burns; secondary questions explore whether overstory survival trends differ based on thinning level, species group, or size class. Interest is in broad groups of trees, not individual tree survival or mortality; consequently, survival analysis methods are used, including nonparametric Kaplan-Meier (KM) techniques for examining single grouping factors, and parametric accelerated failure time models for analyzing simultaneous effects of multiple covariates. Leveraging relatively recent methodological advances, the statistical techniques are adjusted for interval censored data. KM survival curves showed that more frequent prescribed fires did not result in differing survival trends. Also, trees in unthinned stands had the lowest 14-year survival compared to thinned stands, oaks had the highest survival compared to pines and the others species group, and the smallest size class of overstory trees had the lowest survival. In conclusion, these results support managing transitional mixed pine-hardwoods using thinning and multiple prescribed fires to restore specific species composition and structure.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Exploring Localized Geomagnetic Disturbances in Global MHD: Physics and Numerics

One of the prominent effects of space weather is the formation of rapid geomagnetic field variations on Earth's surface driven by the magnetosphere-ionosphere system. These geomagnetic disturbances (GMDs) cause geomagnetically induced currents to run through ground conducting systems. In particular, localized GMDs (LGMDs) can be high amplitude and can have an effect on scale sizes less than 100 km, making them hazardous to power grids and difficult to predict. In this study, we examine the ability of the Space Weather Modeling Framework (SWMF) to reproduce LGMDs in the 7 September 2017 event using both existing and new metrics to quantify the success of the model against observation. We show that the high-resolution SWMF can reproduce LGMDs driven by ionospheric sources, but struggles to reproduce LGMDs driven by substorm effects. We calculate the global maxima of the magnetic fluctuations to show instances when the SWMF captures LGMDs at the correct times but not the correct locations. To remedy these shortcomings we suggest model developments that will directly impact the ability of the SWMF to reproduce LGMDs, most importantly updating the ionospheric conductance calculation from empirical to physics-based.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2024

Higher‐Order Gravity Waves and Traveling Ionospheric Disturbances From the Polar Vortex Jet on 11–15 January 2016: Modeling With HIAMCM‐SAMI3 and Comparison With Observations in the Thermosphere and Ionosphere

Abstract In Vadas et al. (2024, https://doi.org/10.1029/2024ja032521 ), we modeled the atmospheric gravity waves (GWs) during 11–14 January 2016 using the HIAMCM, and found that the polar vortex jet generates medium to large‐scale, higher‐order GWs in the thermosphere. In this paper, we model the traveling ionospheric disturbances (TIDs) generated by these GWs using the HIAMCM‐SAMI3 and compare with ionospheric observations from ground‐based Global Navigation Satellite System (GNSS) receivers, Incoherent Scatter Radars (ISR) and the Super Dual Auroral Radar Network (SuperDARN). We find that medium to large‐scale TIDs are generated worldwide by the higher‐order GWs from this event. Many of the TIDs over Europe and Asia have concentric ring/arc‐like structure, and most of those over North/South America have planar wave structure and occur during the daytime. Those over North/South America propagate southward and are generated by higher‐order GWs from Europe/Asia which propagate over the Arctic. These latter TIDs can be misidentified as arising from geomagnetic forcing. We find that the higher‐order GWs that propagate to Africa and Brazil from Europe may aid in the formation of equatorial plasma bubbles (EPBs) there. We find that the simulated GWs, TIDs and EPBs agree with EISCAT, PFISR, GNSS, and SuperDARN measurements. We find that the higher‐order GWs are concentrated at N at 200 km, in agreement with GOCE and CHAMP data. Thus the polar vortex jet is important for generating TIDs in the northern winter ionosphere via multi‐step vertical coupling through GWs.

Vadas, Sharon L. [Northwest Research Associates Bo↗

DOE OSTI2023

Amazon windthrow disturbances are likely to increase with storm frequency under global warming

Abstract Forest mortality caused by convective storms (windthrow) is a major disturbance in the Amazon. However, the linkage between windthrows at the surface and convective storms in the atmosphere remains unclear. In addition, the current Earth system models (ESMs) lack mechanistic links between convective wind events and tree mortality. Here we find an empirical relationship that maps convective available potential energy, which is well simulated by ESMs, to the spatial pattern of large windthrow events. This relationship builds connections between strong convective storms and forest dynamics in the Amazon. Based on the relationship, our model projects a 51 ± 20% increase in the area favorable to extreme storms, and a 43 ± 17% increase in windthrow density within the Amazon by the end of this century under the high-emission scenario (SSP 585). These results indicate significant changes in tropical forest composition and carbon cycle dynamics under climate change.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Long-term, large-scale experiment reveals the effects of seed limitation, climate, and anthropogenic disturbance on restoration of plant communities in a biodiversity hotspot

Ecological restoration is essential for maintaining biodiversity in the face of dynamic, global changes in climate, human land use, and disturbance regimes. Effective restoration requires understanding bottlenecks in plant community recovery that exist today, while recognizing that these bottlenecks may relate to complex histories of environmental change. Such understanding has been a challenge because few long-term, well-replicated experiments exist to decipher the demographic processes influencing recovery for numerous species against the backdrop of multiyear variation in climate and management. Here we address this challenge through a long-term and geographically expansive experiment in longleaf pine savannas, an imperiled ecosystem and biodiversity hotspot in the southeastern United States. Using 48 sites at three locations spanning 480 km, the 8-y experiment manipulated initial seed arrival for 24 herbaceous plant species and presence of competitors to evaluate the impacts of climate variability and management actions (e.g., prescribed burning) on plant establishment and persistence. Adding seeds increased plant establishment of many species. Cool and wet climatic conditions, low tree density, and reduced litter depth also promoted establishment. Once established, most species persisted for the duration of the 8-y experiment. Plant traits were most predictive when tightly coupled to the process of establishment. Our results illustrate how seed additions can restore plant diversity and how interannual climatic variation affects the dynamics of plant communities across a large region. The significant effects of temperature and precipitation inform how future climate may affect restoration and conservation via large-scale changes in the fundamental processes of establishment and persistence.

60 APPLIED LIFE SCIENCES↗