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Data Integrity Challenges in NASA Giovanni

The Geospatial Interactive Online Visualization ANd aNalysis Infrastructure (Giovanni) is an online tool developed by the NASA Goddard Earth Sciences (GES) Data and Information Services Center (DISC), one of 12 NASA Science Mission Directorate Data Centers (DAACs) to analyze and visualize NASA remote sensing and model data without downloading data and software. As of this writing, over 2000 Earth satellite and model variables are available in Giovanni, including several well-known NASA satellite missions (e.g., TRMM, GPM) and projects (e.g., MERRA-2, GPCP). There are twenty-two plots provided by Giovanni that can be used to analyze, compare, and explore Earth data across disciplines. Results can be shared with colleagues and downloaded for further analysis. Giovanni has helped publish over 3000 referral papers over the years. As open science policies roll in, data integrity has become a major challenge for Giovanni and other tools. For integrity, both data and workflows must be transparent. FAIR-compliant data, including input, intermediate, and result products, as well as their associated statistics, metadata, and information, are needed. The NASA Data Product Development Guide for Data Producers provides a key resource on how to develop FAIR-compliant data products. Data quality information is also needed from data producers and analysis services like Giovanni. The workflow part is quite challenging and requires workflow management improvements, such as recording workflows and making them available to users. In this presentation, we will discuss the data integrity challenges in Giovanni.

data analysis, visualization↗

Tropical Rainfall Measuring Mission (TRMM) Precipitation Data and Services for Research and Applications

Precipitation is a critical component of the Earth's hydrological cycle. Launched on 27 November 1997, TRMM is a joint U.S.-Japan satellite mission to provide the first detailed and comprehensive data set of the four-dimensional distribution of rainfall and latent heating over vastly under-sampled tropical and subtropical oceans and continents (40 S - 40 N). Over the past 14 years, TRMM has been a major data source for meteorological, hydrological and other research and application activities around the world. The purpose of this short article is to inform that the NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) provides TRMM archive and near-real-time precipitation data sets and services for research and applications. TRMM data consist of orbital data from TRMM instruments at the sensor s resolution, gridded data at a range of spatial and temporal resolutions, subsets, ground-based instrument data, and ancillary data. Data analysis, display, and delivery are facilitated by the following services: (1) Mirador (data search and access); (2) TOVAS (TRMM Online Visualization and Analysis System); (3) OPeNDAP (Open-source Project for a Network Data Access Protocol); (4) GrADS Data Server (GDS); and (5) Open Geospatial Consortium (OGC) Web Map Service (WMS) for the GIS community. Precipitation data application services are available to support a wide variety of applications around the world. Future plans include enhanced and new services to address data related issues from the user community. Meanwhile, the GES DISC is preparing for the Global Precipitation Measurement (GPM) mission which is scheduled for launch in 2014.

Liu, Zhong↗

Streamlining Access to Satellite Level 2 Data

Users wishing to work with Satellite Level 2 data often have to overcome many hurdles: various file format standards, large files containing hundreds of variables, inconsistent presentation of geospatial and temporal variables, inhomogeneous data structures, and nonlinear spatial geometry. The Level 2 Subsetting service at NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) has many options to streamline and simplify user access to this data. In this presentation, we will detail the capabilities of this service and demonstrate how users can incorporate it into their Level 2 data workflow.

Huwe, Paul↗

SatCORPS Global Cloud Composite (GCC): the Design and Delivery of A High Quality, High Resolution, Global Cloud Product Available in Near-Real Time

The NASA Satellite ClOud and Radiation Property retrieval System (SatCORPS) supports the development of an analysis ready and cloud-optimized data transformation pipeline and geospatial service enablement of a global cloud composite (GCC) product derived from global geostationary satellite imagery. This geospatial service will be available at high temporal and spatial resolution via the SatCORPS web mapping application for visualization and analysis as well as direct ingestion to common geospatial software and custom programming. The resulting global cloud composite products from the processing pipeline can then be geospatially-service enabled as ArcGIS Image Services and Open Geospatial Consortium (OGC) Web Mapping/Coverage Services for visualization and analysis via a web mapping application and common geospatial software. Near real time global observations are created through the composition of five geostationary satellites that provides modelling and forecasting communities with the capability to provide high quality and timely information to start the projection process. The Global Cloud Composite product combines information from geostationary satellites, GOES-16, GOES-17, Himawari-8, Meteosat-11 and Meteosat-9 to create a single global composite netcdf file and images using the different products within the netcdf file. The SatCORPS team, though our Global Cloud Composite (GCC) product and web-based visualization tools including Geographical Information System (GIS) services provide near real time global cloud product information to both automated processes and traditional web users that is timely and high quality derived from geostationary satellites. The Global Cloud Composite product takes advantage of the scalable processing resources provided by the AWS batch service to provide new composites every thirty minutes. Because information from each of the low earth orbiting satellites is available on schedules tuned to the specific satellite, the processing algorithm temporally composites the final dataset as each satellite’s information becomes available. The SatCORPS team has leveraged our experience using Amazon Web Services (AWS) to build a low latency high availability tool that allows end users both human and automated to acquire high quality and high-resolution Geostationary Earth Orbiting (GEO) information at zero cost to the end user. This presentation will describe how we architected and implemented the service as well as lessons learned based on our experiences both developing and operating the system. The lessons learned include how we integrated multiple services including Amazon Batch, Amazon S3 and Amazon Lambda service to create a low cost but high-performance processing system that is capable of identifying and processing the most appropriate satellite overpass information into global cloud composites. We will also describe our web-based tools including our Geographic Information System that can be used for visualization and analysis. The products from the processing can be geospatially-service enabled as ArcGIS Image Services and Open Geospatial Consortium (OGC) Web Mapping/Coverage Services for visualization and analysis via a web mapping application and common geospatial software. The SatCORPS Global Composite Cloud product provides sophisticated global composited cloud research products with very low latency that we see that as filling a rapidly growing need in the research and modelling community with no up-front nor ongoing costs associated with downloading or using the information.

AWS AMCE SMCE GCC SATCORPS GLOBAL CLOUD COMPOSITE ↗

Weather from 250 Miles Up: Visualizing Precipitation Satellite Data (and Other Weather Applications) Using CesiumJS

Geospatial weather visualization remains predominately a two-dimensional endeavor. Even popular advanced tools like the Nullschool Earth display 2-dimensional fields on a 3-dimensional globe. Yet much of the observational data and model output contains detailed three-dimensional fields. In 2014, NASA and JAXA (Japanese Space Agency) launched the Global Precipitation Measurement (GPM) satellite. Its two instruments, the Dual-frequency Precipitation Radar (DPR) and GPM Microwave Imager (GMI) observe much of the Earth's atmosphere between 65 degrees North Latitude and 65 degrees South Latitude. As part of the analysis and visualization tools developed by the Precipitation Processing System (PPS) Group at NASA Goddard, a series of CesiumJS [Using Cesium Markup Language (CZML), JavaScript (JS) and JavaScript Object Notation (JSON)] -based globe viewers have been developed to improve data acquisition decision making and to enhance scientific investigation of the satellite data. Other demos have also been built to illustrate the capabilities of CesiumJS in presenting atmospheric data, including model forecasts of hurricanes, observed surface radar data, and gridded analyses of global precipitation. This talk will present these websites and the various workflows used to convert binary satellite and model data into a form easily integrated with CesiumJS.

web applications↗

A Collaborative Decision Environment for UAV Operations

NASA is developing Intelligent Mission Management (IMM) technology for science missions employing long endurance unmanned aerial vehicles (UAV's). The IMM groundbased component is the Collaborative Decision Environment (CDE), a ground system that provides the Mission/Science team with situational awareness, collaboration, and decisionmaking tools. The CDE is used for pre-flight planning, mission monitoring, and visualization of acquired data. It integrates external data products used for planning and executing a mission, such as weather, satellite data products, and topographic maps by leveraging established and emerging Open Geospatial Consortium (OGC) standards to acquire external data products via the Internet, and an industry standard geographic information system (GIs) toolkit for visualization As a Science/Mission team may be geographically dispersed, the CDE is capable of providing access to remote users across wide area networks using Web Services technology. A prototype CDE is being developed for an instrument checkout flight on a manned aircraft in the fall of 2005, in preparation for a full deployment in support of the US Forest Service and NASA Ames Western States Fire Mission in 2006.

D'Ortenzio, Matthew V.↗

Bringing Analysis Closer to Data: Developing a Visualization Tool for L2 Earth Science Satellite Data

Earth Science satellite missions provide a unique opportunity for scientists to visualize complex and multifaceted observations projected geospatially across maps of the Earth. While visualization tools can help scientists comprehend, analyze, and share data, visualizing Level-2 Earth Sciences data poses its own specific set of challenges. Since the geospatial information in Level-2 data files is stored as independent variables, the plotting process involves matching dimensional information from latitude and longitude with a desired variable. Variables are stored in different ways across various Earth Science data file formats, which complicates the process of extracting data and plotting variables from a given file without requiring extensive user input and prerequisite familiarity with the file type variable structure. In coordination with NASA’s Goddard Earth Sciences Data Information Services Center (GES DISC), the team developed a Level-2 Earth Science data visualization tool that aims to address some of the complexities associated with plotting Level-2 data. This tool offers command-line and user interface support for file and variable selection to accommodate varying use cases and degrees of user familiarity with the structure of a given file. The visualization tool is written in Python 3 and utilizes a modular approach to facilitate continued expansion and reuse. In addressing some common complications involved in plotting Level-2 Earth Sciences data, the tool aims to help to link the process of analysis more directly with data acquisition and visualization, bringing analysis closer to data across levels of processing.

Li, Angela W.↗

KML Super Overlay to WMS Translator

This translator is a server-based application that automatically generates KML super overlay configuration files required by Google Earth for map data access via the Open Geospatial Consortium WMS (Web Map Service) standard. The translator uses a set of URL parameters that mirror the WMS parameters as much as possible, and it also can generate a super overlay subdivision of any given area that is only loaded when needed, enabling very large areas of coverage at very high resolutions. It can make almost any dataset available as a WMS service visible and usable in any KML application, without the need to reformat the data.

Plesea, Lucian↗

Locating Biodiversity Data Through The Global Change Master Directory

The Global Change Master Directory (GCMD) presently holds descriptions for almost 7000 data sets held worldwide. The directory's primary purpose is for data discovery. The information provided through the GCMD's Directory Interchange Format (DIF) is the set of information that a researcher would need to determine if a particular data set could be of value. By offering data set descriptions worldwide in many scientific disciplines - including meteorology, oceanography, ecology, geology, hydrology, geophysics, remote sensing, paleoclimate, solar-terrestrial physics, and human dimensions of climate change - the GCMD simplifies the discovery of data sources. Direct linkages to many of the data sets are also provided. In addition, several data set registration tools are offered for populating the directory. To search the directory, one may choose the Guided Search or Free-Text Search. Two experimental interfaces were also made available with the latest software release - one based on a keyword search and another based on a graphical interface. The graphical interface was designed in collaboration with the Human Computer Interaction Laboratory at the University of Maryland. The latest version of the software, Version 6, was released in April, 1998. It features the implementation of a scheme to handle hierarchical data set collections (parent-child relationships); a hierarchical geospatial location search scheme; a Java-based geographic map for conducting geospatial searches; a Related-URL field for project-related data set collections, metadata extensions (such as more detailed inventory information), etc.; a new implementation of the Isite software; a new dataset language field; hyperlinked email addresses, and more. The key to the continued evolution of the GCMD is in the flexibility of the GCMD database, allowing modifications and additions to made relatively easily to maintain currency, thus providing the ability to capitalize on current technology while importing all existing records. Changes are discussed and approved through an online "interoperability" forum. The next major release of the GCMD is scheduled for early 1999 and will include the incorporation of a new matrix-based interface, a rapid valids-based query system; improvement in the operations facility - important for future distributed options; new streamlined code for greater performance and maintainability; improvements in the handling of seven current fields proposed through the interoperability forum (at no expense to the data providers); and the release of DOCmorph, a more robust version of DIFmorph to translate many 'standards' multi-directionally. Issues and actions will also be addressed.

Olsen, Lola M.↗

Introduction to this Special Issue on Geostatistics and Scaling of Remote Sensing

The germination of this special PE&RS issue began at the Royal Geographical Society (with the Institute of British Geographers)(RCS-IBC) annual meeting in January, 1997 held at the University of Exeter in Exeter, England. The cold and snow of an England winter were greatly tempered by the friendly and cordial discussions that ensued at the meeting on possible ways to foster both dialog and research across "the Big Pond" between geographers in the US and the UK on the use of geostatistics and geospatial techniques for remote sensing of land surface processes. It was decided that one way to stimulate and enhance cooperation on the application of geostatistics and geospatial methods in remote sensing was to hold parallel sessions on these topics at appropriate meeting venues in 1998 in both the US and the UK Selected papers given at these sessions would be published as a special issue of PE&RS on the US side, and as a special issue of Computers and Geosciences (C&G) on the UK side, to highlight the commonality in research on geostatistics and geospatial methods in remote sensing and spatial data analysis on both sides of the Atlantic Ocean. As a consequence, a session on "Ceostatistics and Geospatial Techniques for Remote Sensing of Land Surface Processes" was held at the Association of American Geographers (AAG) annual meeting in Boston, Massachusetts in March, 1998, sponsored by the AAG's Remote Sensing Specialty Group (RSSG). A similar session was held at the RGS-IBG annual meeting in Guildford, Surrey, England in January 1998, organized by the Modeling and Advanced Techniques Special Interest Group (MAT SIG) of the Remote Sensing Society (RSS). The six papers that in part, comprise this issue of PE&RS, are the US complement to such a dual journal publication effort. Both of us are co-editors of each of the journal special issues, with the lead editor of each journal being from their respective side of the Atlantic where the journals are published. The special issue of C&G that constitutes the other half of this co-edited journal series will be published in early 1999, with 3 papers by US authors being published along with 6 papers authored by individuals from the UK and other places in Europe.

Quattrochi, Dale A.↗

Aspects of Synthetic Vision Display Systems and the Best Practices of the NASA's SVS Project

NASA s Synthetic Vision Systems (SVS) Project conducted research aimed at eliminating visibility-induced errors and low visibility conditions as causal factors in civil aircraft accidents while enabling the operational benefits of clear day flight operations regardless of actual outside visibility. SVS takes advantage of many enabling technologies to achieve this capability including, for example, the Global Positioning System (GPS), data links, radar, imaging sensors, geospatial databases, advanced display media and three dimensional video graphics processors. Integration of these technologies to achieve the SVS concept provides pilots with high-integrity information that improves situational awareness with respect to terrain, obstacles, traffic, and flight path. This paper attempts to emphasize the system aspects of SVS - true systems, rather than just terrain on a flight display - and to document from an historical viewpoint many of the best practices that evolved during the SVS Project from the perspective of some of the NASA researchers most heavily involved in its execution. The Integrated SVS Concepts are envisagements of what production-grade Synthetic Vision systems might, or perhaps should, be in order to provide the desired functional capabilities that eliminate low visibility as a causal factor to accidents and enable clear-day operational benefits regardless of visibility conditions.

Bailey, Randall E.↗

Rapid, High-Resolution Detection of Environmental Change over Continental Scales from Satellite Data - the Earth Observation Data Cube

The effort and cost required to convert satellite Earth Observation (EO) data into meaningful geophysical variables has prevented the systematic analysis of all available observations. To overcome these problems, we utilise an integrated High Performance Computing and Data environment to rapidly process, restructure and analyse the Australian Landsat data archive. In this approach, the EO data are assigned to a common grid framework that spans the full geospatial and temporal extent of the observations - the EO Data Cube. This approach is pixel-based and incorporates geometric and spectral calibration and quality assurance of each Earth surface reflectance measurement. We demonstrate the utility of the approach with rapid time-series mapping of surface water across the entire Australian continent using 27 years of continuous, 25 m resolution observations. Our preliminary analysis of the Landsat archive shows how the EO Data Cube can effectively liberate high-resolution EO data from their complex sensor-specific data structures and revolutionise our ability to measure environmental change.

Lewis, Adam↗

Cloud Giovanni: Reining in Costs and Improving Performance with Analytical Data Stores Using Scalable Serverless Architecture

Giovanni is the Geospatial Interactive Online Visualization ANd aNalysis Infrastructure developed at NASA GES DISC which provides a simple and intuitive way to visualize, analyze, and access vast amounts of Earth science data. It receives large number of user requests each day for a variety of analysis and visualization services, which leads to the big data challenge of serving gradually increasing large data volumes with diverse statistical algorithms. We hereby propose a multi-dimensional accumulation method which provides fast and cost-efficient cloud analysis for diverse services including both area averaging and time averaging. This method involves the weighted volume integration over multiple variable dimensions (time and space), and is implemented in AWS using Athena providing serverless and highly scalable data analysis. Compared to the standard method, this approach dramatically reduced the computational time by order of magnitude with a minimal AWS cost incurred. For example, for a benchmark of 10-year area averaging over the 1x1 degree daily variable, the computational time was reduced from minutes to seconds, and the Athena cost is only $5 for 100,000 requests.

Zhang, Hailiang↗

Urban Image Classification: Per-Pixel Classifiers, Sub-Pixel Analysis, Object-Based Image Analysis, and Geospatial Methods: Chapter - 10

Remote sensing methods used to generate base maps to analyze the urban environment rely predominantly on digital sensor data from space-borne platforms. This is due in part from new sources of high spatial resolution data covering the globe, a variety of multispectral and multitemporal sources, sophisticated statistical and geospatial methods, and compatibility with GIS data sources and methods. The goal of this chapter is to review the four groups of classification methods for digital sensor data from space-borne platforms; per-pixel, sub-pixel, object-based (spatial-based), and geospatial methods. Per-pixel methods are widely used methods that classify pixels into distinct categories based solely on the spectral and ancillary information within that pixel. They are used for simple calculations of environmental indices (e.g., NDVI) to sophisticated expert systems to assign urban land covers. Researchers recognize however, that even with the smallest pixel size the spectral information within a pixel is really a combination of multiple urban surfaces. Sub-pixel classification methods therefore aim to statistically quantify the mixture of surfaces to improve overall classification accuracy. While within pixel variations exist, there is also significant evidence that groups of nearby pixels have similar spectral information and therefore belong to the same classification category. Object-oriented methods have emerged that group pixels prior to classification based on spectral similarity and spatial proximity. Classification accuracy using object-based methods show significant success and promise for numerous urban 3 applications. Like the object-oriented methods that recognize the importance of spatial proximity, geospatial methods for urban mapping also utilize neighboring pixels in the classification process. The primary difference though is that geostatistical methods (e.g., spatial autocorrelation methods) are utilized during both the pre- and post-classification steps. Within this chapter, each of the four approaches is described in terms of scale and accuracy classifying urban land use and urban land cover; and for its range of urban applications. We demonstrate the overview of four main classification groups in Figure 1 while Table 1 details the approaches with respect to classification requirements and procedures (e.g., reflectance conversion, steps before training sample selection, training samples, spatial approaches commonly used, classifiers, primary inputs for classification, output structures, number of output layers, and accuracy assessment). The chapter concludes with a brief summary of the methods reviewed and the challenges that remain in developing new classification methods for improving the efficiency and accuracy of mapping urban areas.

Myint, Soe W.↗

Provenance in Data Interoperability for Multi-Sensor Intercomparison

As our inventory of Earth science data sets grows, the ability to compare, merge and fuse multiple datasets grows in importance. This requires a deeper data interoperability than we have now. Efforts such as Open Geospatial Consortium and OPeNDAP (Open-source Project for a Network Data Access Protocol) have broken down format barriers to interoperability; the next challenge is the semantic aspects of the data. Consider the issues when satellite data are merged, cross-calibrated, validated, inter-compared and fused. We must match up data sets that are related, yet different in significant ways: the phenomenon being measured, measurement technique, location in space-time or quality of the measurements. If subtle distinctions between similar measurements are not clear to the user, results can be meaningless or lead to an incorrect interpretation of the data. Most of these distinctions trace to how the data came to be: sensors, processing and quality assessment. For example, monthly averages of satellite-based aerosol measurements often show significant discrepancies, which might be due to differences in spatio- temporal aggregation, sampling issues, sensor biases, algorithm differences or calibration issues. Provenance information must be captured in a semantic framework that allows data inter-use tools to incorporate it and aid in the intervention of comparison or merged products. Semantic web technology allows us to encode our knowledge of measurement characteristics, phenomena measured, space-time representation, and data quality attributes in a well-structured, machine-readable ontology and rulesets. An analysis tool can use this knowledge to show users the provenance-related distrintions between two variables, advising on options for further data processing and analysis. An additional problem for workflows distributed across heterogeneous systems is retrieval and transport of provenance. Provenance may be either embedded within the data payload, or transmitted from server to client in an out-of-band mechanism. The out of band mechanism is more flexible in the richness of provenance information that can be accomodated, but it relies on a persistent framework and can be difficult for legacy clients to use. We are prototyping the embedded model, incorporating provenance within metadata objects in the data payload. Thus, it always remains with the data. The downside is a limit to the size of provenance metadata that we can include, an issue that will eventually need resolution to encompass the richness of provenance information required for daata intercomparison and merging.

Lynnes, Chris↗

Super-Resolution from Space: Using MERRA-2 and MAIAC Satellite Imagery to Produce Daily Continuous 1 km PM2.5 Estimates

PM2.5 measurements from ground stations are the gold standard when available, but the expense and coverage of such stations limits widespread monitoring. Having accurate PM2.5 estimates outside the range of these stations is important for monitoring this crucial aspect of air quality. The goal of this project is to produce daily 1 km continuous PM2.5 estimates for the contiguous US relying primarily on satellite-derived data sources. This is important because models based on such data can be more easily expanded outside the study area and produce global estimates as well. The temporal availability of such data products is often weekly/daily, unlike land-use products with are often available at a yearly or worse temporal resolution. To achieve our goal, we use a couple of different deep neural network architectures to produce PM2.5 measurements at 10 km and 1 km resolution. We use two model architectures, a UNET-like model and a GAN-based model. We train both models using MERRA-2 data and MAIAC AOD data scaled to 10 km and 1 km for the two different prediction resolutions. MERRA-2 imagery is data rich with a wide range of geospatial variables at 50 km and has long historical availability (beginning in 1980). We’re also using higher spatial resolution MAIAC data at 1 km to provide finer resolution spatial context. This essentially leverages the spatial resolution of MAIAC data and the “wider” information of MERRA-2 data to predict PM2.5. For the target data we’re using a modeled 1 km PM2.5 dataset produced by Harvard to pre-train our models and then fine-tune our models using ground station measurements. Not only are our results comparable with the performance of the Harvard dataset, but can be generalized to any area or time where MERRA-2 and MAIAC data is available.

satellite imagery↗