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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 109 records · Page 6
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Adaptive Online Multivariate Signal Extraction With Locally Weighted Robust Polynomial Regression

High-frequency, multivariate data collected in real-time and used to control or make decisions regarding a process’ operation often contain some noise and outliers. Thus, a method to extract the signal is needed in order to reduce the number and magnitude of control-based adjustments that are implemented. Such a method must be (i) online, depending only on past and current observations; (ii) fast, producing a smooth value more quickly than the measurement frequency; (iii) robust, ignoring brief bursts of erroneously measured values; (iv) multivariate, ignoring observations that are jointly unusual; (v) adaptive, adjusting to periods of rapid fluctuation in the signal versus periods of stability; and (vi) purely data-driven, not incorporating any information about the process from which the data are collected. Most existing methods are only able to address a subset of these six features. Furthermore, we also require the method to be nonlinear, providing a local nonlinear estimate of the signal. In this work, we propose a novel, real-time signal extraction method based on a local, robust polynomial fit. We demonstrate the performance of our method compared to a state-of-the-art competitor through simulation. For illustration, the methodology is applied to data collected from a reverse osmosis water treatment process.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2025

Contrasting Time-Frequency Representations for Unknown Waveform Detection

Identifying unseen electromagnetic waveforms is critical for many applications, like interference management, electronic warfare and spectrum management. Traditionally this is done using statistical methods for anomaly detection, which has evolved to deep learning models for identifying the unseen data, formally termed as open set recognition. Some prior methods use a generative model to emulate open set data, which face challenges in generating synthetic samples for open set while simultaneously selecting an optimal discriminator for accurate classification. To alleviate this issue, we propose a discriminative model that effectively combines time and frequency domain features of communication signals for accurate predictions. We further introduce a cosine similarity loss that makes the domain specific features unique to enhance the prediction rate. Additionally, our model avoids generic feature vectors by extracting class-specific features during training, resulting in improved class representation. The experiment results show that this combined feature approach with cosine loss outperforms single-domain models and improves accuracy by 10% over models without cosine loss.

99 - GENERAL AND MISCELLANEOUS↗
DOE OSTI2025

Enhancing Unknown Waveform Detection by Learning Intra and Inter-domain Dependencies with Advanced Attention Fusion Mechanisms

Detection of unknown waveforms in mission-critical communications is a crucial area of interest for the Department of Energy (DoE). Traditional methods and recent deep learning-based approaches often assume that the training set includes all possible classes, which is impractical for detecting new waveforms. This limitation gives rise to the problem of open-set recognition (OSR), which involves correctly identifying known classes while detecting and rejecting unknown or unseen classes. To address this limitation, we propose a novel dual-domain complex-valued neural architecture that jointly processes time-domain and frequency-domain signal representations using transformer mechanisms. A transformer model is a deep learning architecture that uses self-attention mechanisms to process and learn relationships in sequential data. Our model employs a cosine similarity loss to extract domain-specific features and incorporates a transformer architecture in the latent space to weigh the importance of different features from the time and frequency domains. The transformer layer includes stacked self-attention and cross-attention modules to learn intra-domain and inter-domain dependencies, creating a more holistic signal representation. An attention-based fusion module intelligently combines the time and frequency-domain features using multi-head attention, enabling the network to learn the optimal feature for each domain in each input signal. Quantitative results demonstrate the impact of these architectural choices on overall performance, showing significant improvement after incorporating self and cross-attention modules and using complex attention fusion over simple weighted fusion. Our ongoing work will focus on addressing the limitations of threshold-based OSR methods by developing a novel generative framework that integrates a conditional diffusion probabilistic model (DPM). DPM is a generative framework that learns to synthesize complex data by reversing a gradual noising process using a neural network trained to denoise step-by-step. Our goal is to leverage the inherent strengths of DPMs for identifying unknown signals more robustly. One primary advantage of using a DPM is its ability to provide a more reliable anomaly score based on the model's reconstruction error, rather than relying solely on classifier confidence. Additionally, the iterative denoising process of DPMs makes this approach naturally resilient to low Signal-to-Noise Ratio (SNR) conditions, where traditional methods often fail. By implementing this generative framework, we aim to enhance the model's capability to accurately detect unknown waveforms and maintain performance in challenging environments.

99 - GENERAL AND MISCELLANEOUS↗
DOE OSTI2021

Data processing pipeline for Tianlai experiment

The Tianlai project is a 21cm intensity mapping experiment for detecting dark energy by measuring the baryon acoustic oscillation (BAO) features in the large scale structure power spectrum. This experiment provides an opportunity to test the data processing methods for cosmological 21cm signal extraction, which is still a great challenge in current radio astronomy research. The 21cm signal is much weaker than the foregrounds and easily aected by the imperfections in the instrumental responses. Furthermore, processing the large volumes of interferometer data poses a practical challenge. We have developed a data processing pipeline called tlpipe to process the drift scan survey data from the Tianlai experiment. It performs oine data processing tasks such as radio frequency interference (RFI) agging, array calibration, binning, and map-making, etc. It also includes utility functions needed for the data analysis, such as data selection, transformation, visualization and others. A number of new algorithms are implemented, for example the eigenvector decomposition method for array calibration and the Tikhnov regularization for m-mode analysis. In this paper we describe the design and implementation of the pipeline and illustrate its functions with some analysis of real data. Finally, we outline directions for future development of this publicly code.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
NASA NTRS2012

Greenhouse Gas Concentration Data Recovery Algorithm for a Low Cost, Laser Heterodyne Radiometer

The goal of a coordinated effort between groups at GWU and NASA GSFC is the development of a low-cost, global, surface instrument network that continuously monitors three key carbon cycle gases in the atmospheric column: carbon dioxide (CO2), methane (CH4), carbon monoxide (CO), as well as oxygen (O2) for atmospheric pressure profiles. The network will implement a low-cost, miniaturized, laser heterodyne radiometer (mini-LHR) that has recently been developed at NASA Goddard Space Flight Center. This mini-LHR is designed to operate in tandem with the passive aerosol sensor currently used in AERONET (a well established network of more than 450 ground aerosol monitoring instruments worldwide), and could be rapidly deployed into this established global network. Laser heterodyne radiometry is a well-established technique for detecting weak signals that was adapted from radio receiver technology. Here, a weak light signal, that has undergone absorption by atmospheric components, is mixed with light from a distributed feedback (DFB) telecommunications laser on a single-mode optical fiber. The RF component of the signal is detected on a fast photoreceiver. Scanning the laser through an absorption feature in the infrared, results in a scanned heterodyne signal io the RF. Deconvolution of this signal through the retrieval algorithm allows for the extraction of altitude contributions to the column signal. The retrieval algorithm is based on a spectral simulation program, SpecSyn, developed at GWU for high-resolution infrared spectroscopies. Variations io pressure, temperature, composition, and refractive index through the atmosphere; that are all functions of latitude, longitude, time of day, altitude, etc.; are modeled using algorithms developed in the MODTRAN program developed in part by the US Air Force Research Laboratory. In these calculations the atmosphere is modeled as a series of spherically symmetric shells with boundaries specified at defined altitudes. Temperature, pressure, and species mixing ratios are defined at these boundaries. Between the boundaries, temperature is assumed to vary linearly with altitude while pressure (and thus gas density) vary exponentially. The observed spectrum at the LHR instrument will be the integration of the contributions along this light path. For any absorption measurement the signal at a particular spectral frequency is a linear combination of spectral line contributions from several species. For each species that might absorb in a spectral region, we have pre-calculated its contribution as a function of temperature and pressure. The integrated path absorption spectrum can then by calculated using the initial sun angle (from location, date, and time) and assumptions about pressure and temperature profiles from an atmospheric model. The modeled spectrum is iterated to match the experimental observation using standard multilinear regression techniques. In addition to the layer concentrations, the numerical technique also provides uncertainty estimates for these quantities as well as dependencies on assumptions inherent in the atmospheric models.

Miller, J. Houston↗
NASA NTRS1994

Search for CO absorption bands in IUE far-ultraviolet spectra of cool stars

Observations of the red supergiant (M2 Iab) alpha Ori with the Goddard High Resolution Spectrograph (GHRS) on board the Hubble Space Telescope (HST) have provided an unambiguous detection of a far-ultraviolet (far-UV) chromospheric continuum on which are superposed strong molecular absorption bands. The absorption bands have been identified by Carpenter et al. (1994) with the fourth-positive A-X system of CO and are likely formed in the circumstellar shell. Comparison of these GHRS data with archival International Ultraviolet Explorer (IUE) spectra of alpha Ori indicates that both the continuum and the CO absorption features can be seen with IUE, especially if multiple IUE spectra, reduced with the post-1981 IUESIPS extraction procedure (i.e., with an oversampling slit), are carefully coadded to increase the signal to noise over that obtainable with a single spectrum. We therefore initiated a program, utilizing both new and archival IUE Short Wavelength Prime (SWP) spectra, to survey 15 cool, low-gravity stars, including alpha Ori, for the presence of these two new chromospheric and circumstellar shell diagnostics. We establish positive detections of far-UV stellar continua, well above estimated IUE in-order scattered light levels, in spectra of all of the program stars. However, well-defined CO absorption features are seen only in the alpha Ori spectra, even though spectra of most of the program stars have sufficient signal to noise to allow the dectection of features of comparable magnitude to the absorptions seen in alpha Ori. Clearly if CO is present in the circumstellar environments of any of these stars, it is at much lower column densities.

Gessner, Susan E.↗
NASA NTRS2008

Using the HHT to Search for Gravitational Waves

Gravitational waves are a consequence of Einstein's theory of general relativity applied to the motion of very dense and massive objects such as black holes and neutron stars. Their detection will reveal a wealth of information about these mysterious objects that cannot be obtained with electromagnetic probes. Two projects are underway to attempt the detection of gravitational waves: NASA's Laser Interferometer Space Antenna (LISA), a space based mission being designed to search for waves from supermassive black holes at the centers of galaxies, and the NSF's Laser Interferometer Gravitational Wave Observatory (LIGO), a ground based facility that is now searching for waves from supernovae. pulsars, and the coalescence of black hole and neutron star systems. Because general relativity is an inherently non-linear theory, many of the predicted source waveforms show strong frequency modulation. In addition, the LIGO and LISA detectors are highly sensitive devices that produce a variety of non-linear transient noise features. Thus the unique capabilities of the HHT. the extraction of intrawave modulation and the characterization of non-linear and non-stationary signals, have a natural application to both signal detection and experimental characterization of the detectors. In this talk I will give an overview of the status of the field. including some of the expected sources of gravitational waves, and I will also describe the LISA and LIGO detectors. Then I will describe some applications of the HHT to waveform detection and detector noise characterization.

Camp, Jordan↗
DOE OSTI2021

Detecting Atmospheric Molecules of Nontransiting Temperate Terrestrial Exoplanets Using High-resolution Spectroscopy in the Mid-infrared Domain

Motivated by the development of high-dispersion spectrographs in the mid-infrared (MIR) range, we study their application to the atmospheric characterization of nearby nontransiting temperate terrestrial planets around M-type stars. We examine the detectability of CO{sub 2}, H{sub 2}O, N{sub 2}O, and O{sub 3 }features in high-resolution planetary thermal emission spectra at 12–18 μm assuming an Earth-like profile and a simplified thermal structure. The molecular line width of such planets can be comparable to or broader than the Doppler shift due to the planetary orbital motion. Given the likely difficulty in knowing the high-resolution MIR spectrum of the host star with sufficient accuracy, we propose observing the target system at two quadrature phases and extracting the differential spectra as the planetary signal. In this case, the signals can be substantially suppressed compared with the case where the host star spectrum is perfectly known, as some parts of the spectral features do not remain in the differential spectra. Despite this self-subtraction, the CO{sub 2} and H{sub 2}O features of nearby (≲5 pc) systems with mid-/late-M host stars would be feasible with a 6.5 m class cryogenic space telescope, and orbital inclination could also be constrained for some of them. For CO{sub 2} and N{sub 2}O in a 1 bar Earth-like atmosphere, this method would be sensitive when the mixing ratio is 1–10{sup 3} ppm. The detectability of molecules except O{sub 3} is not significantly improved when the spectral resolution is higher than R≳10,000, although the constraint on the orbital inclination is improved. This study provides some benchmark cases useful for assessing the value of MIR high-resolution spectroscopy in terms of characterization of potentially habitable planets.

47 OTHER INSTRUMENTATION↗
DOE OSTI2024

Seismic Features Predict Ground Motions During Repeating Caldera Collapse Sequence

Abstract Applying machine learning to continuous acoustic emissions, signals previously deemed noise, from laboratory faults and slowly slipping subduction‐zone faults, demonstrates hidden signatures are emitted that describe physical details, including fault displacement and friction. However, no evidence currently exists to demonstrate that similar hidden signals occur during seismogenic stick‐slip on earthquake faults—the damaging earthquakes of most societal interest. We show that continuous seismic emissions emitted during the 2018 multi‐month caldera collapse sequence at the Kı̄lauea volcano in Hawai'i contain hidden signatures characterizing the earthquake cycle. Multi‐spectral data features extracted from 30 s intervals of the continuous seismic emission are used to train a gradient boosted tree regression model to predict the GNSS‐derived contemporaneous surface displacement and time‐to‐failure of the upcoming collapse event. This striking result suggests that at least some faults emit such signals and provide a potential path to characterizing the instantaneous and future behavior of earthquake faults.

58 GEOSCIENCES↗
NASA NTRS1990

Tropical Pacific moisture variability

The objectives are to describe synoptic scale variability of moisture over the tropical Pacific Ocean and the systems leading to this variability; implement satellite analysis procedures in support of this effort, and to incorporate additional satellite information into operational analysis forecast systems at the National Meteorological Center (NMC). Composite satellite radiance patterns describe features detectable well before the development of synoptic scale tropical plumes. These typical features were extracted from historical files of Tiros Operational Vertical Sounder (TOVS) radiance observations for a pair of tropical plumes which developed during January 1989. Signals were inserted into the NMC operational medium range forecast model and a suite of model integrations were conducted. Many of the 48 h model errors of the historical forecasts were eliminated by the inclusion of more complete satellite observations. Three studies in satellite radiance analysis progressed. An analysis which blended TOVS moisture channels, OLR observations and European Center for Medium Weather Forecasts (ECMWF) model analysis to generate fields of total precipitable water comparable to those estimated from Scanning Multichannel Microwave Radiometer (SMMR) mu-wave observations. This study demonstrated that a 10 y climatology of precipitable water over the oceans is feasible, using available infrared observations (OLR and TOVS) and model analysis (ECMWF, NMC or similar quality). The estimates are sensitive to model quality and the estimating model must be updated with operational model changes. Coe developed a set of tropical plume and ITCZ composites from TOVS observations, and from NMC and ECMWF analyses which had been passed through a radiative transfer model to simulate TOVS radiances. The composites have been completed as well as many statistical diagnostics of individual TOVS channels. Analysis of the computations is commencing. Chung has initiated a study of the differences between TOVS observed vapor structure during El Nino Southern Oscillation (ENSO) (1983) and non-ENSO (1984) years. Preliminary diagnosis demonstrates gross moisture changes between warm and cold sea surface temperature episodes.

Mcguirk, James P.↗
NASA NTRS2008

Algorithms for Spectral Decomposition with Applications to Optical Plume Anomaly Detection

The analysis of spectral signals for features that represent physical phenomenon is ubiquitous in the science and engineering communities. There are two main approaches that can be taken to extract relevant features from these high-dimensional data streams. The first set of approaches relies on extracting features using a physics-based paradigm where the underlying physical mechanism that generates the spectra is used to infer the most important features in the data stream. We focus on a complementary methodology that uses a data-driven technique that is informed by the underlying physics but also has the ability to adapt to unmodeled system attributes and dynamics. We discuss the following four algorithms: Spectral Decomposition Algorithm (SDA), Non-Negative Matrix Factorization (NMF), Independent Component Analysis (ICA) and Principal Components Analysis (PCA) and compare their performance on a spectral emulator which we use to generate artificial data with known statistical properties. This spectral emulator mimics the real-world phenomena arising from the plume of the space shuttle main engine and can be used to validate the results that arise from various spectral decomposition algorithms and is very useful for situations where real-world systems have very low probabilities of fault or failure. Our results indicate that methods like SDA and NMF provide a straightforward way of incorporating prior physical knowledge while NMF with a tuning mechanism can give superior performance on some tests. We demonstrate these algorithms to detect potential system-health issues on data from a spectral emulator with tunable health parameters.

Srivastava, Askok N.↗
NASA NTRS1988

An assessment of AVIRIS data for hydrothermal alteration mapping in the Goldfield Mining District, Nevada

Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) data were acquired over the Goldfield Mining District, Nevada, in September 1987. Goldfield is one of the group of large epithermal precious metal deposits in Tertiary volcanic rocks, associated with silicic volcanism and caldera formation. Hydrothermal alteration consists of silicification along fractures, advanced agrillic and argillic zones further away from veins and more widespread propylitic zones. An evaluation of AVIRIS data quality was performed. Faults in the data, related to engineering problems and a different behavior of the instrument while on-board the U2, were encountered. Consequently, a decision was made to use raw data and correct them only for dark current variations and detector read-out-delays. New software was written to that effect. Atmospheric correction was performed using the flat field correction technique. Analysis of the data was then performed to extract spectral information, mainly concentrating on the 2 to 2.45 micron window, as the alteration minerals of interest have their distinctive spectral reflectance features in this region. Principally kaolinite and alunite spectra were clearly obtained. Mapping of the different minerals and alteration zones was attempted using ratios and clustering techniques. Poor signal-to-noise performance of the instrument and the lack of appropriate software prevented the production of an alteration map of the area. Spectra extracted locally from the AVIRIS data were checked in the field by collecting representative samples of the outcrops.

Carrere, Veronique↗
DOE OSTI2020

Super resolution convolutional neural network for feature extraction in spectroscopic data

Two dimensional (2D) peak finding is a common practice in data analysis for physics experiments, which is typically achieved by computing the local derivatives. However, this method is inherently unstable when the local landscape is complicated or the signal-to-noise ratio of the data is low. In this work, we propose a new method in which the peak tracking task is formalized as an inverse problem, which thus can be solved with a convolutional neural network (CNN). In addition, we show that the underlying physics principle of the experiments can be used to generate the training data. By generalizing the trained neural network on real experimental data, we show that the CNN method can achieve comparable or better results than traditional derivative based methods. This approach can be further generalized in different physics experiments when the physical process is known.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2024

Evidence for B + → K + ν ν ¯ decays

We search for the rare decay B + → K + ν ν ¯ in a 362 fb − 1 sample of electron-positron collisions at the ϒ ( 4 S ) resonance collected with the Belle II detector at the SuperKEKB collider. We use the inclusive properties of the accompanying B meson in ϒ ( 4 S ) → B B ¯ events to suppress background from other decays of the signal B candidate and light-quark pair production. We validate the measurement with an auxiliary analysis based on a conventional hadronic reconstruction of the accompanying B meson. For background suppression, we exploit distinct signal features using machine learning methods tuned with simulated data. The signal-reconstruction efficiency and background suppression are validated through various control channels. The branching fraction is extracted in a maximum likelihood fit. Our inclusive and hadronic analyses yield consistent results for the B + → K + ν ν ¯ branching fraction of [ 2.7 ± 0.5 ( stat ) ± 0.5 ( syst ) ] × 10 − 5 and [ 1.1 − 0.8 + 0.9 ( stat ) − 0.5 + 0.8 ( syst ) ] × 10 − 5 , respectively. Combining the results, we determine the branching fraction of the decay B + → K + ν ν ¯ to be [ 2.3 ± 0.5 ( stat ) − 0.4 + 0.5 ( syst ) ] × 10 − 5 , providing the first evidence for this decay at 3.5 standard deviations. The combined result is 2.7 standard deviations above the standard model expectation. Published by the American Physical Society 2024

Astronomy & Astrophysics↗
DOE OSTI2024

Compressed baryon acoustic oscillation analysis is robust to modified-gravity models

Abstract We study the robustness of the baryon acoustic oscillation (BAO) analysis to the underlying cosmological model. We focus on testing the standard BAO analysis that relies on the use of a template. These templates are constructed assuming a fixed fiducial cosmological model and used to extract the location of the acoustic peaks. Such “compressed analysis” had been shown to be unbiased when applied to the ΛCDM model and some of its extensions. However, it has not been known whether this type of analysis introduces biases in a wider range of cosmological models where the template may not fully capture relevant features in the BAO signal. In this study, we apply the compressed analysis to noiseless mock power spectra that are based on Horndeski models, a broad class of modified-gravity theories specified with eight additional free parameters. We study the precision and accuracy of the BAO peak-location extraction assuming DESI, DESI II, and MegaMapper survey specifications. We find that the bias in the extracted peak locations is negligible; for example, it is less than 10% of the statistical error for even the proposed future MegaMapper survey. Our findings indicate that the compressed BAO analysis is remarkably robust to the underlying cosmological model.

Astronomy & Astrophysics↗
NASA NTRS1973

ERIM progress report on use of ERTS-1 data: Summary report of work on ten tasks

The author has identified the following significant results. Several of the tasks have produced significant results which are summarized: (1) Absolute water depth can be calculated from a ratio of signals from bands MSS 4 and MSS 5. (2) A 13 category terrain feature classification map of Yellowstone National Park has been produced using supervised pattern recognition techniques. (3) ERTS-1 data has been shown to provide a detection and monitoring capability for a number of water quality problems associated with off-shore ocean dumping sites and inland lakes. (4) A corrected ratio of bands MSS-5 and MSS-7 signals has been formed. (5) A concise format has been devised for storing the ratio signatures of geologic rock and mineral materials determined from laboratory reflectance spectra. (6) Results of work in information extraction demonstrate: signal variability exists among ERTS-1 detectors in any one spectral band that will impact users doing quantitative analysis on successive ERTS-1 images; a newly developed computer-aided procedure for correlating ERTS-1 pixels to ground features; the strong influence of atmospheric effects in ERTS-1 data; and area estimation accuracies are better using the ERIM proportion estimation algorithm than for conventional recognition techniques.

Thomson, F. J.↗
DOE OSTI2022

SAFE-OCC: A novelty detection framework for Convolutional Neural Network sensors and its application in process control

Herein we present a novelty detection framework for Convolutional Neural Network (CNN) sensors that we call Sensor-Activated Feature Extraction One-Class Classification (SAFE-OCC). We show that this framework enables the safe use of computer vision sensors in process control architectures. Emergent control applications use CNN models to map visual data to a state signal that can be interpreted by the controller. Incorporating such sensors introduces a significant system operation vulnerability because CNN sensors can exhibit high prediction errors when exposed to novel (abnormal) visual data. Unfortunately, identifying such novelties in real-time is nontrivial. To address this issue, the SAFE-OCC framework leverages the convolutional blocks of the CNN to create an effective feature space to conduct novelty detection using a desired one-class classification technique. This approach engenders a feature space that directly corresponds to that used by the CNN sensor and avoids the need to derive an independent latent space. We demonstrate the effectiveness of SAFE-OCC via simulated control environments.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

A deep dilated convolutional residual network for predicting interchain contacts of protein homodimers

Abstract Motivation Deep learning has revolutionized protein tertiary structure prediction recently. The cutting-edge deep learning methods such as AlphaFold can predict high-accuracy tertiary structures for most individual protein chains. However, the accuracy of predicting quaternary structures of protein complexes consisting of multiple chains is still relatively low due to lack of advanced deep learning methods in the field. Because interchain residue–residue contacts can be used as distance restraints to guide quaternary structure modeling, here we develop a deep dilated convolutional residual network method (DRCon) to predict interchain residue–residue contacts in homodimers from residue–residue co-evolutionary signals derived from multiple sequence alignments of monomers, intrachain residue–residue contacts of monomers extracted from true/predicted tertiary structures or predicted by deep learning, and other sequence and structural features. Results Tested on three homodimer test datasets (Homo_std dataset, DeepHomo dataset and CASP-CAPRI dataset), the precision of DRCon for top L/5 interchain contact predictions (L: length of monomer in a homodimer) is 43.46%, 47.10% and 33.50% respectively at 6 Å contact threshold, which is substantially better than DeepHomo and DNCON2_inter and similar to Glinter. Moreover, our experiments demonstrate that using predicted tertiary structure or intrachain contacts of monomers in the unbound state as input, DRCon still performs well, even though its accuracy is lower than using true tertiary structures in the bound state are used as input. Finally, our case study shows that good interchain contact predictions can be used to build high-accuracy quaternary structure models of homodimers. Availability and implementation The source code of DRCon is available at https://github.com/jianlin-cheng/DRCon. The datasets are available at https://zenodo.org/record/5998532#.YgF70vXMKsB. Supplementary information Supplementary data are available at Bioinformatics online.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗