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At least 109 records · Page 6

A partitioning strategy for nonuniform problems on multiprocessors

The partitioning of a problem on a domain with unequal work estimates in different subddomains is considered in a way that balances the work load across multiple processors. Such a problem arises for example in solving partial differential equations using an adaptive method that places extra grid points in certain subregions of the domain. A binary decomposition of the domain is used to partition it into rectangles requiring equal computational effort. The communication costs of mapping this partitioning onto different microprocessors: a mesh-connected array, a tree machine and a hypercube is then studied. The communication cost expressions can be used to determine the optimal depth of the above partitioning.

Berger, M. J.↗

A partitioning strategy for nonuniform problems on multiprocessors

The partitioning of a problem on a domain with unequal work estimates in different subdomains is considered in a way that balances the work load across multiple processors. Such a problem arises for example in solving partial differential equations using an adaptive method that places extra grid points in certain subregions of the domain. A binary decomposition of the domain is used to partition it into rectangles requiring equal computational effort. The communication costs of mapping this partitioning onto different microprocessors: a mesh-connected array, a tree machine and a hypercube is then studied. The communication cost expressions can be used to determine the optimal depth of the above partitioning.

Berger, Marsha J.↗

Mechanistic and predictive understanding of needle litter decay in semi-arid mountain ecosystems experiencing unprecedented vegetation mortality. Final report

This research compared needle litter decay rates and underlying mechanisms between litter released from insect-killed trees to that of naturally senesced litter from healthy trees across climate variables with elevation and snowmelt rates as variables. Our research was designed to address questions of whether there is a significant impact to C and N cycling at the terrestrial-atmospheric interface in association with pine needle decomposition and the role of changes in soil moisture and temperature as a function of these processes. Field activities were primarily conducted within the Rocky Mountain Biological Laboratory’s (RMBL) East River watershed across a spectrum of ecoregions that spanned approximately 700 vertical meters. Forested catchments at these elevations in southwestern Colorado are threatened by heat-induced drought, altered snowmelt patterns, and invasive insect infestation that have all been associated with climate change. Needle litter from two members of the Pinaceae family experiencing large-scale insect infestations (spruce and lodgepole pine) were collected, redeployed and then sampled over the course of three years. We experimentally tested three tractable parameters that are known to impact litter decay and biogeochemical cycling and are relevant to bark beetle-induced tree mortality: (1) moisture content, (2) temperature by using elevation as a surrogate, and (3) changes to litter compositional chemistry that result from beetle infestation. We examined decay processes and monitored the migration of soluble and gaseous nitrogen and carbon species as well as microbiological signatures of decay such as biodegradable fractions, metal availability and the temporal succession of associated microorganisms at the terrestrial interface.

54 ENVIRONMENTAL SCIENCES↗

Resource stoichiometry and the biogeochemical consequences of nitrogen deposition in a mixed deciduous forest

Abstract Ecosystems often show differential sensitivity to chronic nitrogen (N) deposition; hence, a critical challenge is to improve our understanding of how and why site‐specific factors mediate biogeochemical responses to N enrichment. We examined the extent to which N impacts on soil carbon (C) and N dynamics depend on microbial resource stoichiometry. We added N to forest plots dominated by ectomycorrhizal ( ECM ) trees, which have litter and soil pools rich in organic N and relatively wide C:N ratios, and adjacent forest plots dominated by arbuscular mycorrhizal ( AM ) trees, which have litter and soil pools rich in inorganic N and relatively narrow C:N ratios. While microbes in both plot types exhibited fairly strict biomass homeostasis, microbes in AM ‐ and ECM ‐dominated plots differed in their physiological responses to N addition. Microbes in ECM plots responded to N enrichment by decreasing their investment in N‐acquisition enzymes (relative to C‐acquisition enzymes) and increasing N mineralization rates (relative to C mineralization rates), suggesting that N addition alleviated microbial N demand. In contrast, heterotrophic microbial activities in AM plots were unaffected by N addition, most likely as a result of N‐induced increases in net nitrification (60% increase relative to control plots) and nitrate mobilization (e.g., sixfold increases in mobilization relative to control plots). Combined, our findings suggest the stoichiometric differences between AM and ECM soils are the primary drivers of the observed responses. Plant and microbial communities characterized by wide C:N are more susceptible to N‐induced changes in decomposition and soil C dynamics, whereas communities characterized by narrow C:N are more susceptible to N‐induced nitrate leaching losses. Hence, the biogeochemical consequences of N deposition in temperate forests may be driven by the stoichiometry of the dominant trees and their associated microbes.

Midgley, Meghan G.↗

IMPACTS OF INTERACTING ELEVATED ATMOSPHERIC CO2 AND O3 ON THE STRUCTURE AND FUNCTIONING OF A NORTHERN FOREST ECOSYSTEM: OPERATING AND DECOMMISSIONING THE ASPEN FACE PROJECT

Two of the most important and pervasive greenhouse gases driving global change and impacting forests in the U.S. and around the world are atmospheric CO2 and tropospheric O3. As the only free air, large-scale manipulative experiment studying the interaction of elevated CO2 and O3 on forests, the Aspen FACE experiment was uniquely designed to address the long-term ecosystem level impacts of these two greenhouse gases on aspen-birch-maple forests, which dominate the richly forested Lake States region. The project was established in 1997 to address the overarching scientific question: “What are the effects of elevated [CO2] and [O3], alone and in combination, on the structure and functioning of northern hardwood forest ecosystems?” From 1998 through the middle of the 2009 growing season, we examined the interacting effects of elevated CO2 and O3 on ecosystem processes in an aggrading northern forest ecosystem to compare the responses of early-successional, rapid-growing shade intolerant trembling aspen and paper birch to those of a late successional, slower growing shade tolerant sugar maple. Fumigations with elevated CO2 (560 ppm during daylight hours) and O3 (approximately 1.5 x ambient) were conducted during the growing season from 1998 to 2008, and in 2009 through harvest date. Response variables quantified during the experiment included growth, competitive interactions and stand dynamics, physiological processes, plant nutrient status and uptake, tissue biochemistry, litter quality and decomposition rates, hydrology, soil respiration, microbial community composition and respiration, VOC production, treatment-pest interactions, and treatment-phenology interactions. In 2009, we conducted a detailed harvest of the site. The harvest included detailed sampling of a subset of trees by component (leaves and buds, fine branches, coarse branches and stem, coarse roots, fine roots) and excavation of soil to a depth of 1 m. Throughout the experiment, aspen and birch photosynthesis increased with elevated CO2 and tended to decrease with elevated O3, compared to the control. In contrast to aspen and birch, maple photosynthesis was not enhanced by elevated CO2. Elevated O3 did not cause significant reductions in maximum photosynthesis in birch or maple. In addition, photosynthesis in ozone sensitive clones was affected to a much greater degree than that in ozone tolerant aspen clones. Treatment effects on photosynthesis contributed to CO2 stimulation of aboveground and belowground growth that was species and genotype dependent, with birch and aspen being most responsive and maple being least responsive. The positive effects of elevated CO2 on net primary productivity NPP were sustained through the end of the experiment, but negative effects of elevated O3 on NPP had dissipated during the final three years of treatments. The declining response to O3 over time resulted from the compensatory growth of O3-tolerant genotypes and species as the growth of O3-sensitive individuals declined over time. Cumulative NPP over the entire experiment was 39% greater under elevated CO2 and 10% lower under elevated O3. Enhanced NPP under elevated CO2 was sustained by greater root exploration of soil for growth-limiting N, as well as more rapid rates of litter decomposition and microbial N release during decay. Results from Aspen FACE clearly indicate that plants growing under elevated carbon dioxide, regardless of community type or ozone level, obtained significantly greater amounts of soil N. These results indicate that greater plant growth under elevated carbon dioxide has not led to “progressive N limitation”. If similar forests growing throughout northeastern North America respond in the same manner, then enhanced forest NPP under elevated CO2 may be sustained for a longer duration than previously thought, and the negative effect of elevated O3 may be diminished by compensatory growth of O3-tolerant plants as they begin to dominate forest communities. By the end of the experiment, elevated CO2 increased ecosystem C content by 11%, whereas elevated O3 decreased ecosystem C content by 9%. Total ecosystem C content in the interaction treatment (elevated CO2 and O3) did not significantly differ from that of the control. Total ecosystem C content responded similarly to the treatments across the three forest communities. The treatment effects on ecosystem C content resulted from differences in tree biomass, particularly woody tissues (branches, stem, and coarse roots), and lower C content in the near-surface mineral soil. During its duration, the Aspen FACE project involved collaboration between scientists from 9 countries, and over the course of the experiment there were over 120 Aspen FACE scientific users. These scientists helped produce 75 publications during the most recent funding period (2008-2014) and 207 peer-reviewed publications (169 in refereed journals) since the beginning of the project.

54 ENVIRONMENTAL SCIENCES↗

Chemical changes in organic matter after fungal colonization in a nitrogen fertilized and unfertilized Norway spruce forest

Decomposition and transformation of organic matter (OM) in forest soils are conducted by the concomitant action of saprotrophic and mycorrhizal fungi. Here, we examine chemical changes in OM after fungal colonization in nitrogen fertilized and unfertilized soils from a Norway spruce forest. Sand-filled bags amended with composted maize leaves were placed in the forest soil and harvested after 17 months. Infrared and near edge X-ray absorption fine structure spectroscopies were used to study the chemical changes in the OM. Fungal community composition of the bags was also evaluated. The proportion of ectomycorrhizal fungi declined in the fertilized plots, but the overall fungal community composition was similar between N treatments. Decomposition of the OM was, independently of the N level or soil horizon, accompanied by an increase of C/N ratio of the mesh-bag content. Furthermore, the proportions of carboxylic compounds in the incubated OM increased in the mineral horizon, while heterocyclic-N compounds decreased, especially in unfertilized plots with higher N demand from the trees.

54 ENVIRONMENTAL SCIENCES↗

Gauged soft recursion: on-shell construction of Goldstone-gauge amplitudes

We present a new on-shell recursion relation for scattering amplitudes involving Nambu-Goldstone bosons with a gauged unbroken symmetry. A central challenge is that gauge interactions break Adler’s zero condition for charged scalars, invalidating the standard soft recursion. To overcome this, we introduce a “gauged soft recursion” that leverages the soft theorems of the gauge bosons themselves, combined with a novel decomposition of amplitudes into gauge-invariant components where Adler’s zero is partially restored. The formalism, which also incorporates internal gauge bosons via angular momentum constraints, enables the systematic construction of tree-level amplitudes with arbitrary numbers of Goldstone bosons and gauge bosons in both Abelian and non-Abelian theories, as we demonstrate with explicit examples.

Chiral Lagrangian↗

SPRUCE Fungal Necromass Litter Bag Decomposition Study in SPRUCE Experimental Plots, 2016-2018

This dataset provided the results of a 2-year fungal necromass litter bag decomposition study at the Spruce and Peatland Responses Under Changing Environments (SPRUCE) experimental site within the Marcell Experimental Forest in northern Minnesota, USA. Necromass from four mycorrhizal fungal species that naturally occur and associate with either the ectomycorrhizal (EM) tree hosts or ericoid mycorrhizal (ERM) shrubs in the S1 Bog site and vary in melanin content (Cenococcum geophilum Fr., Suillus grisellus, Meliniomyces bicolor, and Oideodendron griseum) were incubated in situ in SPRUCE experimental treatment chambers for 3, 12, and 24 months duration beginning in June of 2016 and ending in June of 2018. Analyses of the necromass included pre-incubation chemistry and post-incubation mass loss and Fourier transform infrared (FTIR) spectroscopy of remaining fungal necromass. These data were used in analyses in Fernandez et al (2019). This dataset contains three data files in comma-separate values (*.csv) format. Additional metadata are provided: three data dictionaries and a file-level metadata file in comma-separate values (.csv) format and a user guide in PDF (*.pdf) format.

54 ENVIRONMENTAL SCIENCES↗

Five-dimensional spinor helicity for all masses and spins

We develop a spinor helicity formalism for five-dimensional scattering amplitudes of any mass and spin configuration. While five-dimensional spinor helicity variables have been previously studied in the context of $\mathcal{N}$ = 2, 4 supersymmetric Yang-Mills scattering amplitudes with spin less than two [1], we propose an alternative viewpoint that stems from d-dimensional spinor helicity variables avoiding the decomposition of a massive momentum into the sum of two massless momenta. By enumerating all possible independent little group tensors, we systematically build the full space of five-dimensional three-point tree-level scattering amplitudes for any configuration of spins and masses. Furthermore, we provide a prescription for computing the high energy limit of scattering amplitudes written in our spinor helicity variables. We also expect that our formalism will be applicable to effective field theories with higher spin, in particular, the scattering of highly spinning black holes in five dimensions.

Field Theories in Higher Dimensions↗

A multistage distributionally robust optimization approach to water allocation under climate uncertainty

This paper investigates a Multistage Distributionally Robust Optimization (MDRO) approach to water allocation under climate uncertainty. The MDRO is formed by creating sets of conditional distributions (called conditional ambiguity sets) on a finite scenario tree. The distributions in the conditional ambiguity sets remain close to a nominal conditional distribution according a ø-divergence (e.g., Kullback-Leibler divergence, Hellinger distance, Burg entropy, etc.). Here, the paper discusses a decomposition algorithm to solve the resulting MDRO with ø-divergences, which uses the dual formulation and solves only linear subproblems instead of convex ones. Some properties of the algorithm such as generating feasible policies and valid upper/lower bounds are established. The paper then applies the modeling and solution techniques to allocate water in a rapidly-developing area of Tucson, Arizona. Tucson, like many arid and semi-arid regions around the world, faces considerable uncertainty in its ability to provide water for its citizens in the future. The primary sources of uncertainty in the Tucson region include (1) unpredictable population growth, (2) the availability of water from the Colorado River, and (3) the effects of climate variability on water consumption. This paper integrates forecasts for all these sources of uncertainty into a single optimization model for robust and sustainable water allocation. Then, it uses this model to analyze the value of constructing additional treatment facilities to reduce future water shortages. The results indicate that the MDRO approach can be very valuable for water managers by providing insights to minimize their risks and help them plan for the future.

54 ENVIRONMENTAL SCIENCES↗

Notes on implementation of Coulomb friction in coupled dynamical simulations

A coupled dynamical system is defined as an assembly of rigid/flexible bodies that may be coupled by kinematic connections. The interfaces between bodies are modeled using hinges having 0 to 6 degrees of freedom. The equations of motion are presented for a mechanical system of n flexible bodies in a topological tree configuration. The Lagrange form of the D'Alembert principle was employed to derive the equations. The equations of motion are augmented by the kinematic constraint equations. This augmentation is accomplished via the method of singular value decomposition.

Vandervoort, R. J.↗

Parallel Nonnegative CP Decomposition of Dense Tensors

The CP tensor decomposition is a low-rank approximation of a tensor. We present a distributed-memory parallel algorithm and implementation of an alternating optimization method for computing a CP decomposition of dense tensors that can enforce nonnegativity of the computed low-rank factors. The principal task is to parallelize the Matricized-Tensor Times Khatri-Rao Product (MTTKRP) bottleneck subcomputation. The algorithm is computation efficient, using dimension trees to avoid redundant computation across MTTKRPs within the alternating method. Our approach is also communication efficient, using a data distribution and parallel algorithm across a multidimensional processor grid that can be tuned to minimize communication. We benchmark our software on synthetic as well as hyperspectral image and neuroscience dynamic functional connectivity data, demonstrating that our algorithm scales well to 100s of nodes (up to 4096 cores) and is faster and more general than the currently available parallel software.

Ballard, Grey↗

Mangrove Mapping with the Freeman-Durden Polarimetric Decomposition and Insar Coherence from ALOS-2

We map mangrove extents in Pongara National Park, Gabon using the Freeman-Durden Decomposition and InSAR Coherence derived from ALOS-2 imagery. Specifically, we obtain a land cover map derived from both this polarimetric decom-position and a 14-day repeat-pass coherence. Our classification model and results are highly interpretable based on a depth 2 decision tree. We further illustrate the correlation between InSAR coherence and height obtaining rough man-grove height estimates from TanDEM-X data. From our results, we observe that repeat-pass interferometric coherence provides invaluable information about mangrove extents and coastal forests. The clear identification of mangrove extents presents a significant opportunity for NISAR, which will pro-vide 12-day repeat pass images over coastal areas globally.

Tien-Hao Liao↗

Long-term carbon and nitrogen dynamics at SPRUCE revealed through stable isotopes in peat profiles

Abstract. Peatlands encode information about past vegetation dynamics, climate, and microbial processes. Here, we used δ15N and δ13C patterns from 16 peat profiles to deduce how the biogeochemistry of the Marcell S1 forested bog in northern Minnesota responded to environmental and vegetation change over the past ∼ 10 000 years. In multiple regression analyses, δ15N and δ13C correlated strongly with depth, plot location, C ∕ N, %N, and each other. Correlations with %N, %C, C ∕ N, and the other isotope accounted for 80 % of variance for δ15N and 38 % of variance for δ13C, reflecting N and C losses. In contrast, correlations with depth and topography (hummock or hollow) reflected peatland successional history and climate. Higher δ15N in plots closer to uplands may reflect upland-derived DON inputs and accompanying shifts in N dynamics in the lagg drainage area surrounding the bog. The Suess effect (declining δ13CO2 since the Industrial Revolution) lowered δ13C in recent surficial samples. High δ15N from −35 to −55 cm probably indicated the depth of ectomycorrhizal activity after tree colonization of the peatland over the last 400 years, as confirmed by the occasional presence of wood down to −35 cm depth. High δ13C at ∼ 4000 years BP (−65 to −105 cm) could reflect a transition at that time to slower rates of peat accumulation, when 13C discrimination during peat decomposition may increase in importance. Low δ13C and high δ15N at −213 and −225 cm ( ∼ 8500 years BP) corresponded to a warm period during a sedge-dominated rich fen stage. The above processes appear to be the primary drivers of the observed isotopic patterns, whereas there was no clear evidence for methane dynamics influencing δ13C patterns.

54 ENVIRONMENTAL SCIENCES↗

Monitoring of Volcanogenic CO2-Induced Tree Kills with AVIRIS Image Data at Mammoth Mountain, California

Elevated cold CO2 emissions from the flank of Mammoth Mountain volcano on the southwest rim of the Long Valley Caldera, eastern California, have been the cause of over 100 acres of dead trees in that area since 1990. The source of the CO2 gas is thought to be from one or more magmatic intrusion(s) beneath Mammoth Mountain and is probably related to a period of seismic unrest that began in 1989. The gas rises to the surface probably from depths of a few kilometers, along faults and fracture zones. The gas is at ambient temperature and diffuses from the soil rather than discharging from distinct vents. Typically, soil gas concentrations in tree-kill areas range from 10% to over 90% CO2 by volume, as compared to normal background of < 1% in healthy forest. The gas composition is predominantly CO2 mixed with air (sulfur gases are not elevated), and C and He isotopic ratios are consistent with a magmatic origin for the gas. The total CO2 emission has been estimated at 1200 tons/day, comparable to the emissions at Kilauea. Some of the dead trees are as old as 250 years, suggesting that similar anomalous gas discharge has not occurred over the previous few hundred years. The delta C-13/12 ratio in the Mammoth Mountain CO2 emission averages about -4.5 (PDB standard). This is consistent with a mantle source for the carbon. However, the large volume of the emission suggests that not all of the CO2 is necessarily being generated from the 1989 intrusion. The voluminous gas could be leaking from a vapor-rich zone, capped by an impermeable layer, that was supplied CO2 from degassing of many small magma bodies that intruded beneath the mountain over a period of decades or centuries. Earthquakes in 1989 could have fractured the capping layer and provided pathways for the escape Of CO2 to the surface. Alternatively, some of the CO2 could be derived from contact metamorphism of carbonate rocks intruded by magma. Carbonate-bearing Paleozoic roof pendents crop out in close proximity to Mammoth Mountain. It is possible that similar rocks could occur at depth beneath Mammoth Mountain, and could have contributed CO2 from thermal decomposition caused from recent intrusions. We hope to determine the C-13/12 ratio of a suite of samples to demonstrate if the carbonate rocks could be the source of at least part of the 1990-97 CO2 emission. To better understand the behavior of the CO2 gas, we have used hyperspectral imagery data of Mammoth Mountain acquired from the Airborne Visual/Infrared Imaging Spectrometer (AVIRIS) to map out areas of dead trees. The areas of tree kill have increased in size from about 50 acres in 1994 to about 100 acres in 1997. Tree kill is the major surface manifestation of the carbon dioxide flux at Mammoth Mountain, is widely dispersed, and has been cursorily mapped by regular field mapping techniques in the area. Initial investigations using airborne digital imagery from the Thematic Mapper Simulator (NS001) and AVIRIS instruments have shown extremely encouraging results for complete delineation of the vegetation anomalies. The most successful maps (when compared with ground truth) were developed using AVIRIS data with spectral angle mapper and matched filter algorithms with a data set that was reduced to maximum variance via the minimum noise fraction transformation. The result of this work is a series of maps that show the tree kill areas occurring in an halo-pattern surrounding the base of Mammoth Mountain. We are applying these same techniques to earlier AVIRIS images of Mammoth Mountain to examine the progression of the tree kill areas over time. Temporal maps of the tree kill areas may assist in constructing a picture of the structure beneath Mammoth Mountain.

Hausback, Brian P.↗

Automatic Attribute Profiles

Morphological attribute profiles are multilevel decompositions of images obtained with a sequence of transformations performed by connected operators. They have been extensively employed in performing multi-scale and region-based analysis in a large number of applications. One main, still unresolved, issue is the selection of filter parameters able to provide representative and non-redundant threshold decomposition of the image. This paper presents a framework for the automatic selection of filter thresholds based on Granulometric Characteristic Functions (GCFs). GCFs describe the way that non-linear morphological filters simplify a scene according to a given measure. Since attribute filters rely on a hierarchical representation of an image (e.g., the Tree of Shapes) for their implementation, GCFs can be efficiently computed by taking advantage of the tree representation. Eventually, the study of the GCFs allows the identification of a meaningful set of thresholds. Therefore, a trial and error approach is not necessary for the threshold selection, automating the process and in turn decreasing the computational time. It is shown that the redundant information is reduced within the resulting profiles (a problem of high occurrence, as regards manual selection). The proposed approach is tested on two real remote sensing data sets, and the classification results are compared with strategies present in the literature.

97 MATHEMATICS AND COMPUTING↗

Modelling Temporal Variability in the Carbon Balance of a Spruce/Moss Boreal Forest

A model of the daily carbon balance of a black spruce/feathermoss boreal forest ecosystem was developed and results compared to preliminary data from the 1994 BOREAS field campaign in northern Manitoba, Canada. The model, driven by daily weather conditions, simulated daily soil climate status (temperature and moisture profiles), spruce photosynthesis and respiration, moss photosynthesis and respiration, and litter decomposition. Model agreement with preliminary field data was good for net ecosystem exchange (NEE), capturing both the asymmetrical seasonality and short-term variability. During the growing season simulated daily NEE ranged from -4 g C m(exp -2) d(exp -1) (carbon uptake by ecosystem) to + 2 g C m(exp -2) d(exp -1) (carbon flux to atmosphere), with fluctuations from day to day. In the early winter simulated NEE values were + 0.5 g C m(exp -2) d(exp -1), dropping to + 0.2 g C m(exp -2) d(exp -1) in mid-winter. Simulated soil respiration during the growing season (+ 1 to + 5 g C m(exp -2) d(exp -1)) was dominated by metabolic respiration of the live moss, with litter decomposition usually contributing less than 30% and live spruce root respiration less than 10% of the total. Both spruce and moss net primary productivity (NPP) rates were higher in early summer than late summer. Simulated annual NEE for 1994 was -51 g C m(exp -2) y(exp -1), with 83% going into tree growth and 17% into the soil carbon accumulation. Moss NPP (58 g C m(exp -2) d(exp -1)) was considered to be litter (i.e. soil carbon input; no net increase in live moss biomass). Ecosystem respiration during the snow-covered season (84 g Cm(exp -2)) was 58% of the growing season net carbon uptake. A simulation of the same site for 1968-1989 showed about 10-20% year-to-year variability in heterotrophic respiration (mean of + 113 g C m-2 y@1). Moss NPP ranged from 19 to 114 g C m(exp -2) y(exp -1); spruce NPP from 81 to 150 g C nt-2 y,@l; spruce growth (NPP minus litterfall) from 34 to 103 g C m(exp -2) y(exp -1); NEE ranged from +37 to -142 g C m(exp -2) y(exp -1). Values for these carbon balance terms in 1994 were slightly smaller than the 1969 - 89 means. Higher ecosystem productivity years (more negative NEE) generally had early springs and relatively wet summers; lower productivity years had late springs and relatively dry summers.

Frolking, S.↗