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DOE OSTI2020

Organizing principles for vegetation dynamics

Understanding vegetation dynamics is very challenging because of the multitude of contributing processes at 64widely different spatial and temporal scales. In this Perspective we propose that understanding of vegetation dynamics can be improved, permitting better predictions, based on organizing principles that constrain plant and ecosystem be haviour: natural selection, self-organization, and entropy maximization. Although these ideas are increasingly used,a limited common understanding of their theoretical basis has prevented their full potential to be realized. We explain the power of natural selection-based optimality to predict photosynthesis and carbon allocation responses to multiple environmental drivers, and how individual plasticity leads to the predictable self-organization of forest canopies. We show how models of natural selection acting on a few key traits can generate realistic plant communities, and how entropy maximization can distinguish between stochastic and deterministic drivers of vegetation patterns. In combination with empirical exploration of patterns in plant functional variation, these principles can accelerate the development of dynamic vegetation models as well as trait-based ecology resting on strengthened theoretical and empirical foundations.

Geosciences↗

NASA NTRS1992

Forest Imaging

NASA's Technology Applications Center, with other government and academic agencies, provided technology for improved resources management to the Cibola National Forest. Landsat satellite images enabled vegetation over a large area to be classified for purposes of timber analysis, wildlife habitat, range measurement and development of general vegetation maps.

Source record↗

NASA NTRS1984

Vegetation and soils field research data base: Experiment summaries

Understanding of the relationships between the optical, spectral characteristics and important biological-physical parameters of earth-surface features can best be obtained by carefully controlled studies over fields and plots where complete data describing the condition of targets are attainable and where frequent, timely spectral measurement can be obtained. Development of a vegetation and soils field research data base was initiated in 1972 at Purdue University's Laboratory for Applications of Remote Sensing and expanded in the fall of 1974 by NASA as part of LACIE. Since then, over 250,000 truck-mounted and helicopter-borne spectrometer/multiband radiometer observations have been obtained of more than 50 soil series and 20 species of crops, grasses, and trees. These data are supplemented by an extensive set of biophysical and meteorological data acquired during each mission. The field research data form one of the most complete and best-documented data sets acquired for agricultural remote sensing research. Thus, they are well-suited to serve as a data base for research to: (1) quantiatively determine the relationships of spectral and biophysical characteristics of vegetation, (2) define future sensor systems, and (3) develop advanced data analysis techniques.

Biehl, L. L.↗

NASA NTRS1997

Reproductive Ontogeny of Wheat Grown on the MIR Space Station

The reproductive ontogeny of 'Super-Dwarf' wheat grown on the space station Mir is chronicled from the vegetative phase through flower development. Changes in the apical meristem associated with transition From the vegetative phase to floral initiation and development of the reproductive spike were all typical of 'Super Dwarf' wheat up to the point of anthesis. Filament elongation, which characteristically occurs just prior to anthesis and moves the anthers through the stigmatic branches thus facilitating pollination, did no1 xcur in the flowers of spikes grown on Mir. While development of spikes on tillers typically occurs later :han that of spikes on the main stem, all flowers appear to be arrested at the same developmental point.

Bubenheim, David L.↗

DOE OSTI2025

PII interactions with the acetyl-CoA carboxylase subunits BADC and BCCP co-regulate lipid and nitrogen metabolism in Arabidopsis

In plants, the initiation of fatty acid synthesis is catalyzed by acetyl-CoA carboxylase (ACCase), which produces malonyl-CoA. The heteromeric form of ACCase (htACCase) is a holoenzyme consisting of biotin carboxylase and carboxyltransferase sub-complexes, both of which are subject to extensive regulation. Biotin carboxylase activity is controlled in part by the presence of the catalytic biotin carboxyl carrier proteins (BCCP1/2) and/or the non-catalytic, non-biotinylated, biotin/lipoyl attachment domain-containing proteins (BADC1/2/3) that associate with backbone biotin carboxylase (BC) protein. However, the mechanisms regulating BADC and BCCP interactions with BC and, consequently, ACCase activity in planta , remain unclear. Here, we demonstrate that the Arabidopsis ( Arabidopsis thaliana ) regulatory protein PII modulates htACCase activity through independent interactions with BADC and BCCP proteins in a selective manner. Analysis of badc1 badc2 and badc1 badc3 mutant lines and the respective pii triple mutants revealed that changes in seed oil and protein accumulation of badc double mutants are PII/nitrogen dependent. Absolute quantification of htACCase subunits and PII in developing seeds suggests that Arabidopsis exerts tight regulation over individual protein stoichiometry to balance oil and protein accumulation. The effects on vegetative and seed development indicate that PII and BADC proteins have distinct yet overlapping roles in regulating plant metabolism.

Garneau, Matthew G. [Washington State Univ., Pullm↗

NASA NTRS1985

Biochemical processes in sagebrush ecosystems: Interactions with terrain

The objectives of a biogeochemical study of sagebrush ecosystems in Wyoming and their interactions with terrain are as follows: to describe the vegetational pattern on the landscape and elucidate controlling variables, to measure the soil properties and chemical cycling properties associated with the vegetation units, to associate soil properties with vegetation properties as measured on the ground, to develop remote sensing capabilities for vegetation and surface characteristics of the sagebrush landscape, to develop a system of sensing snow cover and indexing seasonal soil to moisture; and to develop relationships between temporal Thematic Mapper (TM) data and vegetation phenological state.

Matson, P.↗

NASA NTRS1988

Radar scattering and soil moisture

Research is being conducted on microwave scattering from vegetation. The objective is to develop techniques for measuring parameters of the vegetation canopy (such as biomass) needed for understanding global biogeochemical cycles and to develop techniques for correcting microwave measurements of soil moisture for the effects of the vegetation canopy. Measurements of vegetation and soil moisture are important for understanding the environment on a global scale. For example, moisture in the soil is an important, highly variable, element in the global hydrologic cycle. The hydrologic cycle, in turn, is strongly coupled to weather and climate through moisture (and energy) fluxes at the surface. The amount and distribution of vegetation is an important element in biogeochemical cycles; and knowledge of both the vegetation canopy and soil moisture is of practical importance in agricultural management. These theories are examined.

Levine, D. M.↗

NASA NTRS1973

The use of color infrared photography for wetlands mapping with special reference to shoreline and waterfowl habitat assessment

Evaluation of low altitude oblique photography obtained by hand-held cameras was useful in determining specifications of operational mission requirements for conventional smaller-scaled vertical photography. Remote sensing techniques were used to assess the rapid destruction of marsh areas at Pointe Mouillee. In an estuarian environment where shoreline features change yearly, there is a need for revision in existing area maps. A land cover inventory, mapped from aerial photography, provided essential data necessary for determining adjacent lands suitable for marshland development. To quantitatively assess the wetlands environment, a detailed inventory of vegetative communities (19 categories) was made using color infrared photography and intensive ground truth. A carefully selected and well laid-out transect was found to be a key asset to photointerpretation and to the analysis of vegetative conditions. Transect data provided the interpreter with locally representative areas of various vegetative types. This facilitated development of a photointerpretation key. Additional information on vegetative conditions in the area was also obtained by evaluating the transect data.

Source record↗

NASA NTRS1998

Estimating Soil Moisture from Satellite Microwave Observations

Cooperative research in microwave remote sensing between the Hydrological Sciences Branch of the NASA Goddard Space Flight Center and the Earth Sciences Faculty of the Vrije Universiteit Amsterdam began with the Botswana Water and Energy Balance Experiment and has continued through a series of highly successful International Research Programs. The collaboration between these two research institutions has resulted in significant scientific achievements, most notably in the area of satellite-based microwave remote sensing of soil moisture. The Botswana Program was the first joint research initiative between these two institutions, and provided a unique data base which included historical data sets of Scanning Multifrequency Microwave Radiometer (SN4NM) data, climate information, and extensive soil moisture measurements over several large experimental sites in southeast Botswana. These data were the basis for the development of new approaches in physically-based inverse modelling of soil moisture from satellite microwave observations. Among the results from this study were quantitative estimates of vegetation transmission properties at microwave frequencies. A single polarization modelling approach which used horizontally polarized microwave observations combined with monthly composites of Normalized Difference Vegetation Index was developed, and yielded good results. After more precise field experimentation with a ground-based radiometer system, a dual-polarization approach was subsequently developed. This new approach realized significant improvements in soil moisture estimation by satellite. Results from the Botswana study were subsequently applied to a desertification monitoring study for the country of Spain within the framework of the European Community science research programs EFEDA and RESMEDES. A dual frequency approach with only microwave data was used for this application. The Microwave Polarization Difference Index (MPDI) was calculated from 37 GHz data and used to derive the one-way canopy transmissivity. Using a simple radiative transfer model, this information was combined with horizontally polarized 6.6 GHz SMMR observations to derive a 9-year time series of soil moisture for all of Spain at a one quarter degree spatial scale. Both day and night SMMR observations were used independently, in order to check the consistency of the results. A first order Fourier Transform was performed on the mean monthly soil moisture values to identify major characteristics of time series such as trend, amplitude, and phase shift.

Owe, M.↗

NASA NTRS1997

Plant reproduction in spaceflight environments

Because plant reproduction is a complex developmental process there are many possible sites of perturbation by the unusual environments of orbital spacecraft. Previous long-duration experiments on Soviet platforms shared features of slowed development through the vegetative stage of plant growth and aborted reproductive function. Our goal has been to understand how special features of the spaceflight environment impact physiological function and reproductive development. In a series of short-duration experiments in the Shuttle mid-deck we studied early reproductive development in Arabidopsis thaliana. Pollen and ovule development aborted at an early stage in the first experiment on STS-54 which utilized closed plant growth chambers. Post-flight analysis suggested that the plants may have been carbon dioxide limited. Subsequent experiments utilized carbon dioxide enrichment (on STS-51) and cabin air flow-through with an air exchange system (on STS-68). Both modifications allowed pollen and ovule development to occur normally on orbit, and full reproductive development up to the stage of an immature seed occurred on STS-68. However, analysis of plant roots from these experiments demonstrated a limitation in rootzone aeration in the spaceflight material that was not mitigated by these procedures. In the future, additional resources (crew time, upgraded flight hardware, and special platforms) will invite more elaborate, long-duration experimentation. On the ISS, a variable speed centrifuge and upgraded plant habitats will permit detailed experiments on the role of gravity in shaping the plant micro-environment, and what influence this plays during reproduction.

Review, Tutorial↗

NASA NTRS1986

Multipolarization radar images for geologic mapping and vegetation discrimination

NASA has developed an airborne SAR that simultaneously yields image data in four linear polarizations in L-band with 10-m resolution over a swath of about 10 km. Signal data are recorded both optically and digitally and annotated in each of the channels to facilitate completely automated digital correlation. Comparison of the relative intensities of the different polarizations furnishes discriminatory mapping information. Local intensity variations in like-polarization images result from topographic effects, while strong cross polarization responses denote the effects of vegetation cover and, in some cases, possible scattering from the subsurface. In each of the areas studied, multiple polarization data led to the discrimination and mapping of unique surface unit features.

Evans, D. L.↗

NASA NTRS1996

Estimating Canopy Water Content of Chaparral Shrubs Using Optical Methods

California chaparral ecosystems are exceptionally fire adapted and typically are subject to wildfire at decadal to century frequencies. The hot dry Mediterranean climate summers and the chaparral communities of the Santa Monica Mountains make wildfire one of the most serious economic and life-threatening natural disasters faced by the region. Additionally, the steep fire-burned hillsides are subject to erosion, slumpage, and mud slides during the winter rains. The Santa Monica Mountain Zone (SMMZ) is a 104,000 ha eastwest trending range with 607 m of vertical relief and located in the center of the greater Los Angeles region. A series of fires in the fall of 1993 burned from Simi Valley to Santa Monica within a few hours. Developing techniques to monitor fire hazard and predict the spread of fire is of major concern to the region. One key factor in the susceptibility to fire is the water content of the vegetation canopy. The development of imaging spectrometry and remote sensing techniques may constitute a tool to provide this information.

Ustin, Susan L.↗

DOE OSTI2023

Assessing Impacts of Environmental Perturbations on Urban Biogenic Carbon Exchange in the Chicago Region

Carbon dioxide (CO 2 ) quantification is critical for assessing city-level carbon emissions and sustainable urban development. While urban vegetation has the potential to provide environmental benefits, such as heat and carbon mitigation, the CO 2 exchange from biogenic sectors and its impact from the environmental perturbations are often overlooked. It is also challenging to simulate the plant functions in the complex urban terrain. This study presents a processed-based modeling approach to assess the biogenic carbon fluxes from the vegetated areas over the Chicago Metropolitan Area (CMA) using the Weather Research and Forecast—Urban Biogenic Carbon exchange model. We investigate the change of CO 2 sink power in CMA under heatwaves and irrigation. The results indicate that the vegetation plays a significant role in the city's carbon portfolio and the landscaping management has the potential to reduce carbon emissions significantly. Furthermore, based on the competing mechanisms in the biogenic carbon balance identified in this study, we develop a novel Environmental Benefit Score metrics framework to identify the vulnerability and mitigation measures associated with nature-based solutions (NbS) within CMA. By using the generalized portable framework and our science-policy confluence analysis presented in this study, global cities can maximize the effectiveness of NbS and accelerate carbon neutrality.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1978

A comprehensive data processing plan for crop calendar MSS signature development from satellite imagery: Crop identification using vegetation phenology

The author has identified the following significant results. The phenological method of crop identification involves the creation of crop signatures which characterize multispectral observations as phenological growth states. The phenological signature models spectral reflectance explicitly as a function of crop maturity rather than as a function of date. A correspondence of time to growth state is established which minimizes the smallest difference between the given multispectral multitemporal vector and a category mean vector. The application of the method to the identification of winter wheat and corn shows (1) the method is capable of discriminating crop type with about the same degree of accuracy as more traditional classifiers; (2) the use of LANDSAT observations on two or more dates yields better results than the use of a single observation; and (3) some potential is demonstrated for labeling the degree of maturity of the crop, as well as the crop type.

Hlavka, C. A.↗

NASA NTRS2022

Flash Drought Onset and Development Mechanisms Captured With Soil Moisture and Vegetation Data Assimilation

Flash droughts evolve and intensify rapidly under the influence of anomalous atmospheric conditions. In this study, we investigate the role of assimilating remotely sensed soil moisture (SM) and vegetation properties in capturing the evolution and impacts of two flash droughts in the Northern Great Plains. We find that during 2016 drought triggered by anomalously high temperatures and excessive evaporative demands, multivariate data assimilation (DA) of MODIS-derived leaf area index (LAI) and Soil Moisture Active Passive SM within Noah-Multiparameterization model helps capture elevated transpiration at onset. Assimilation of LAI particularly helped model the resulting rapid decline in SM during onset with as high as 10.0% steeper rate of decline compared to the simulation without any assimilation. Modeled-SM anomalies exhibit a 7.5% and 11.7% increase in similarity with Evaporative Stress Index (ESI) data and U.S. Drought Monitor (USDM) maps, respectively. In contrast, during 2017 flash drought driven by record-low precipitation during summers, SM assimilation resulted in largest rates of decline in rootzone SM, as large as 48.4% compared to results from no assimilation. Multivariate DA of SM and LAI results in 6.7% and 14.3% higher spatial similarity with ESI and USDM, respectively, and is necessary to model rapid intensification caused by anomalous precipitation deficits. This study elucidates the need to incorporate multiple observational constraints from remote sensing to effectively capture rapid onset rates, intensification, and severity of flash drought following different propagation mechanisms. This is fundamental for drought early detection to provide a wider window of response and implement efficient mitigation strategies.

Shahryar K. Ahmad↗

NASA NTRS1993

Temporal changes in endmember abundances, liquid water and water vapor over vegetation at Jasper Ridge

Imaging spectrometry offers a new way of deriving ecological information about vegetation communities from remote sensing. Applications include derivation of canopy chemistry, measurement of column atmospheric water vapor and liquid water, improved detectability of materials, more accurate estimation of green vegetation cover and discrimination of spectrally distinct green leaf, non-photosynthetic vegetation (NPV: litter, wood, bark, etc.) and shade spectra associated with different vegetation communities. Much of our emphasis has been on interpreting Airborne Visible/Infrared Imaging Spectrometry (AVIRIS) data spectral mixtures. Two approaches have been used, simple models, where the data are treated as a mixture of 3 to 4 laboratory/field measured spectra, known as reference endmembers (EM's), applied uniformly to the whole image, to more complex models where both the number of EM's and the types of EM's vary on a per-pixel basis. Where simple models are applied, materials, such as NPV, which are spectrally similar to soils, can be discriminated on the basis of residual spectra. One key aspect is that the data are calibrated to reflectance and modeled as mixtures of reference EM's, permitting temporal comparison of EM fractions, independent of scene location or data type. In previous studies the calibration was performed using a modified-empirical line calibration, assuming a uniform atmosphere across the scene. In this study, a Modtran-based calibration approach was used to map liquid water and atmospheric water vapor and retrieve surface reflectance from three AVIRIS scenes acquired in 1992 over the Jasper Ridge Biological Preserve. The data were acquired on June 2nd, September 4th and October 6th. Reflectance images were analyzed as spectral mixtures of reference EM's using a simple 4 EM model. Atmospheric water vapor derived from Modtran was compared to elevation, and community type. Liquid water was compare to the abundance of NPV, Shade and Green Vegetation (VG) for select sites to determine whether a relationship existed, and under what conditions the relationship broke down. Temporal trends in endmember fractions, liquid water and atmospheric water vapor were investigated also. The combination of spectral mixture analysis and the Modtran based atmospheric/liquid water models was used to develop a unique vegetation community description.

Roberts, Dar A.↗

NASA NTRS1993

Temporal Changes in Endmember Abundances, Liquid Water and Water Vapor Over Vegetation at Jasper Ridge

In this study, a Modtran-based calibration approach was used to map liquid water and atmospheric water vapor and retrieve surface reflectance from three AVIRIS scenes acquired in 1992 over the Jasper Ridge Biological Preserve. Temporal trends in endmember fractions, liquid water and atmospheric water vapor were investigated also. The combination of spectral mixture analysis and the Modtran based atmospheric/liquid water models was used to develop a unique vegetation community description.

liquid↗

DOE OSTI2020

Voxel carving–based 3D reconstruction of sorghum identifies genetic determinants of light interception efficiency

Changes in canopy architecture traits have been shown to contribute to yield increases. Optimizing both light interception and light interception efficiency of agricultural crop canopies will be essential to meeting the growing food needs. Canopy architecture is inherently three-dimensional (3D), but many approaches to measuring canopy architecture component traits treat the canopy as a two-dimensional (2D) structure to make large scale measurement, selective breeding, and gene identification logistically feasible. We develop a high throughput voxel carving strategy to reconstruct 3D representations of sorghum from a small number of RGB photos. Our approach builds on the voxel carving algorithm to allow for fully automatic reconstruction of hundreds of plants. It was employed to generate 3D reconstructions of individual plants within a sorghum association population at the late vegetative stage of development. Light interception parameters estimated from these reconstructions enabled the identification of known and previously unreported loci controlling light interception efficiency in sorghum. The approach is generalizable and scalable, and it enables 3D reconstructions from existing plant high throughput phenotyping datasets. We also propose a set of best practices to increase 3D reconstructions’ accuracy.

3D plant reconstruction↗