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Distributed Stochastic Optimization of a Neural Representation Network for Time-Space Tomography Reconstruction
4D time-space reconstruction of dynamic events or deforming objects using X-ray computed tomography (CT) is an important inverse problem in non-destructive evaluation. Conventional back-projection based reconstruction methods assume that the object remains static for the duration of several tens or hundreds of X-ray projection measurement images (reconstruction of consecutive limited-angle CT scans). However, this is an unrealistic assumption for many in-situ experiments that causes spurious artifacts and inaccurate morphological reconstructions of the object. To solve this problem, we propose to perform a 4D time-space reconstruction using a distributed implicit neural representation (DINR) network that is trained using a novel distributed stochastic training algorithm. Our DINR network learns to reconstruct the object at its output by iterative optimization of its network parameters such that the measured projection images best match the output of the CT forward measurement model. Here, we use a forward measurement model that is a function of the DINR outputs at a sparsely sampled set of continuous valued 4D object coordinates. Unlike previous neural representation architectures that forward and back propagate through dense voxel grids that sample the object's entire time-space coordinates, we only propagate through the DINR at a small subset of object coordinates in each iteration resulting in an order-of-magnitude reduction in memory and compute for training. DINR leverages distributed computation across several compute nodes and GPUs to produce high-fidelity 4D time-space reconstructions. We use both simulated parallel-beam and experimental cone-beam X-ray CT datasets to demonstrate the superior performance of our approach.
Data Movement Dominates: Advanced Memory Technology to Address the Real Exascale Power Problem
Energy is the fundamental barrier to Exascale supercomputing and is dominated by the cost of moving data from one point to another, not computation. Similarly, performance is dominated by data movement, not computation. The solution to this problem requires three critical technologies: 3D integration, optical chip-to-chip communication, and a new communication model. The central goal of the Sandia led "Data Movement Dominates" project aimed to develop memory systems and new architectures based on these technologies that have the potential to lower the cost of local memory accesses by orders of magnitude and provide substantially more bandwidth. Only through these transformational advances can future systems reach the goals of Exascale computing with a manageable power budgets. The Sandia led team included co-PIs from Columbia University, Lawrence Berkeley Lab, and the University of Maryland. The Columbia effort of Data Movement Dominates focused on developing a physically accurate simulation environment and experimental verification for optically-connected memory (OCM) systems that can enable continued performance scaling through high-bandwidth capacity, energy-efficient bit-rate transparency, and time-of-flight latency. With OCM, memory device parallelism and total capacity can scale to match future high-performance computing requirements without sacrificing data-movement efficiency. When we consider systems with integrated photonics, links to memory can be seamlessly integrated with the interconnection network-in a sense, memory becomes a primary aspect of the interconnection network. At the core of the Columbia effort, toward expanding our understanding of OCM enabled computing we have created an integrated modeling and simulation environment that uniquely integrates the physical behavior of the optical layer. The PhoenxSim suite of design and software tools developed under this effort has enabled the co-design of and performance evaluation photonics-enabled OCM architectures on Exascale computing systems.
Computational and experimental study of laminar flames
During the past three years, our research has centered on an investigation of the effects of complex chemistry and detailed transport on the structure and extinction of hydrocarbon flames in coflowing axisymmetric configurations. We have pursued both computational and experimental aspects of the research in parallel on both steady-state and time-dependent systems. The computational work has focused on the application of accurate and efficient numerical methods for the solution of the steady-state and time-dependent boundary value problems describing the various reacting systems. Detailed experimental measurements were performed on axisymmetric coflow flames using two-dimensional imaging techniques. Previously, spontaneous Raman scattering, chemiluminescence, and laser-induced fluorescence were used to measure the temperature, major and minor species profiles. Particle image velocimetry (PIV) has been used to investigate velocity distributions and for calibration of time-varying flames. Laser-induced incandescence (LII) with an extinction calibration was used to determine soot volume fractions, while soot surface temperatures were measured with three-color optical pyrometry using a color digital camera. A blackbody calibration of the camera allows for determination of soot volume fraction as well, which can be compared with the LII measurements. More recently, we have concentrated on a detailed characterization of soot using a variety of techniques including time-resolved LII (TiRe-LII) for soot primary particles sizes, multi-angle light scattering (MALS) for soot radius of gyration, and spectrally-resolved line of sight attenuation (spec-LOSA). Combining the information from all of these soot measurements can be used to determine the soot optical properties, which are observed to vary significantly depending on spatial location and fuel dilution. Our goal has been to obtain a more fundamental understanding of the important fluid dynamic and chemical interactions in these flames so that this information can be used effectively in combustion modeling.
High Pressure Fire Loop Analysis
The scope will be limited to analyzing the effect of the EFC within the system and how one improperly installed coupling affects the rest of the HPFL system. The discussion will include normal operations, impaired flow, and service interruptions. Normal operations are defined as two-way flow to buildings. Impaired operations are defined as a building that only has one-way flow being provided to the building. Service interruptions will be when a building does not have water available to it. The project will look at the following aspects of the reliability of the HPFL system: mean time to failure (MTTF) of EFCs, mean time between failures (MTBF), series system models, and parallel system models. These calculations will then be used to discuss the reliability of the system when one of the couplings fails. Compare the reliability of two-way feeds versus one-way feeds.
Updated SALSA3D Tomographic Velocity Model for Improved Travel-Time Prediction and Uncertainty
This poster will be shown at the 2023 Seismological Society of America conference in San Juan, Puerto Rico. The audience will consist of international members of academia and U.S. lab and government members. Due to time limits, full review is being undertaken in parallel with HQ review. The full review will not be accepted until HQ approval comes through.
Floating device aligns blind connections
Panel-mounted connectors overcome the misalignment of blind connectors in electronic rack mounted equipment. The connector is free to move in the vertical direction by the action of a parallelogram mount. This freedom of motion maintains the guide pin hole centerline parallel to the guide pin centerline at all times.
A solution of a time-dependent equation of radiative transfer
Time dependent radiative transfer equation for plane-parallel isotropic scattering medium in first Gaussian approximation
An estimate of mean flow properties in a turbulent diffusion flame
Turbulent diffusion flames were computed while neglecting fluctuations of density, concentration and temperature, with reference to a central hydrogen jet issuing into a parallel coaxial airstream. An estimate for the time-average rate of fuel consumption was made, based mainly on dimensional analysis.
Methodology of modeling and measuring computer architectures for plasma simulations
A brief introduction to plasma simulation using computers and the difficulties on currently available computers is given. Through the use of an analyzing and measuring methodology - SARA, the control flow and data flow of a particle simulation model REM2-1/2D are exemplified. After recursive refinements the total execution time may be greatly shortened and a fully parallel data flow can be obtained. From this data flow, a matched computer architecture or organization could be configured to achieve the computation bound of an application problem. A sequential type simulation model, an array/pipeline type simulation model, and a fully parallel simulation model of a code REM2-1/2D are proposed and analyzed. This methodology can be applied to other application problems which have implicitly parallel nature.
Feasibility study of transit photon correlation anemometer for Ames Research Center unitary wind tunnel plan
A laser transit anemometer measured a two-dimensional vector velocity, using the transit time of scattering particles between two focused and parallel laser beams. The objectives were: (1) the determination of the concentration levels and light scattering efficiencies of naturally occurring, submicron particles in the NASA/Ames unitary wind tunnel and (2) the evaluation based on these measured data of a laser transit anemometer with digital correlation processing for nonintrusive velocity measurement in this facility. The evaluation criteria were the speeds at which point velocity measurements could be realized with this technique (as determined from computer simulations) for given accuracy requirements.
Detailed study on acceleration and propagation of energetic protons and electrons in the magnetotail during substorm activity
High time resolution measurements of energetic particles and magnetic field measurements by the IMP 8 satellite in the distant magnetotail are presented for November 26, 1973, when exceptionally intense particle bursts were detected by both the IMP 7 and 8 spacecraft. During the onset of the most intense burst as well as at other times, oppositely directed anisotropies of protons and electrons parallel to the tail field and lasting up to about 60 sec were observed, implying the presence of field-aligned electric fields. The particle and field observations are discussed in the context of proposed mechanisms for the acceleration of particles during various dynamical magnetospheric processes. Satellite instrument readings are presented through the extensive use of graphs.
Microbial ecology of extreme environments: Antarctic dry valley yeasts and growth in substrate-limited habitats
The success of the Antarctic Dry Valley yeasts presumeably results from adaptations to multiple stresses, to low temperatures and substrate-limitation as well as prolonged resting periods enforced by low water availability. Previous investigations have suggested that the crucial stress is substrate limitation. Specific adaptations may be pinpointed by comparing the physiology of the Cryptococcus vishniacii complex, the yeasts of the Tyrol Valley, with their congeners from other habitats. Progress was made in methods of isolation and definition of ecological niches, in the design of experiments in competition for limited substrate, and in establishing the relationships of the Cryptococcus vishniacii complex with other yeasts. In the course of investigating relationships, a new method for 25SrRNA homology was developed. For the first time it appears that 25SrRNA homology may reflect parallel or convergent evolution.
Transient brightenings of interconnecting loops. III Interpretation
Two alternative interpretations of the sudden X-ray brightenings observed in loops that interconnect active regions are presented. A fast tearing mode may be excited in those newly formed interconnecting loops within which sufficient magnetic free energy is stored to drive the mode. Alternatively, anomalous Joule heating driven by an inductive electric field parallel to the magnetic field, varying on a time scale of order of a minute, may cause the brightenings. It is suggested that it is plausible that the fast tearing mode may be the cause of brightenings in the young newly formed interconnecting loops, whereas the anomalous Joule heating might occur in old loop connections when an exteral disturbance propagates through them.
Electromagnetic induction by finite wavenumber source fields in 2-D lateral heterogeneities - The transverse electric mode
Electromagnetic induction in a laterally homogeneous earth is analyzed in terms of a source field with finite dimensions. Attention is focused on a time-varying two-dimensional current source directed parallel to the strike of a two-dimensional anomalous structure within the earth, i.e., the E-parallel mode. The spatially harmonic source field is expressed as discontinuities in the magnetic (or electric) field of the current in the source. The model is applied to describing the magnetic gradients across megatectonic features, and may be used to predict the magnetic fields encountered by a satellite orbiting above the ionosphere.
Anomalous transport by Kelvin-Helmholtz instabilities
A simulation of magnetohydrodynamic Kelvin-Helmholtz instabilities has been performed for parallel and transverse configurations, modeling high latitude (or downstream flanks) and dayside low latitude magnetospheric boundaries. In the parallel configuration, a super-Alfvenic and transsonic shear flow develops into small eddies, which strongly compresses, twists, and hence amplifies the magnetic field by the dynamo action with an amplification factor of M(A)/2. In the nonlinear stage, however large the initial Alfven mach number M(A) may be, the magnetic field amplified and twisted by the hydromagnetic flow vortices reacts back upon the flow evolution, and the flow vortices cascade into smaller structures. In the transverse configuration, the instability leads to the formation of a fast shock discontinuity from an initially subfast shear flow. Anomalous tangential stress by the instability in the transverse configuration reaches 1 percent of the magnetosheath momentum flux, but for the parallel configuration, the anomalous transport is 2-3 times larger than the anomalous transport in the transverse configuration. The anomalous transport for both configurations satisfies the requirement of the viscous-like interaction at the magnetospheric boundary.
Extended testing of a general contextual classifier using the massively parallel processor - Preliminary results and test plans
Earlier encouraging test results of a contextual classifier that combines spatial and spectral information employing a general statistical approach are expanded. The earlier results were of limited meaning because they were produced from small (50-by-50 pixel) data sets. An implementation of the contextual classifier on NASA Goddard's Massively Parallel Processor (MPP) is presented; for the first time the MPP makes feasible the testing of the classifier on large data sets (a 12-hour test on a VAX-11/780 minicomputer now takes 5 minutes on the MPP). The MPP is a Single-Instruction, Multiple Data Stream computer, consisting of 16,384 bit serial microprocessors connected in a 128-by-128 mesh array with each element having data transfer connections with its four nearest neighbors so that the MPP is capable of billions of operations per second. Preliminary results are given (with more expected for the conference) and plans are mentioned for extended testing of the contextual classifier on Thematic Mapper data sets.
Hydrodynamical constraints on cosmic-ray acceleration in relativistic shocks
A two-fluid hydrodynamical model governing the transport of cosmic rays in a relativistically moving background plasma is developed. The equations are used to discuss the time asymptotic structure of a relativistic, plane-parallel shock wave significantly modified by first-order Fermi acceleration of cosmic rays. The model allows for an anisotropic cosmic-ray pressure tensor with pressure components parallel and perpendicular to the shock normal. It is surmised that the well-known energy threshold problem for diffusive shock acceleration that downstream particles have a large enough velocity to overtake the shock and subsequently scatter in the upstream medium before returning to the downstream medium may be expressed hydrodynamically by the condition V less than V(cr), where V is the fluid velocity relative to the shock and V(cr) is the relativistic cosmic-ray sound speed. Astrophysical implications of the results are briefly discussed.