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At least 1,117 records · Page 62

Scalable line and plane relaxation in a parallel structured multigrid solver

The efficient solution of sparse, linear systems that arise through the discretization of partial differential equations remains a key challenge for a range of high performance scientific simulations. One approach for reducing data movement and improving performance is by exposing and exploiting structure in a problem through the use of robust structured multilevel solvers. By choosing coarsening that preserves the structure of the problem, these methods maintain efficient structured computation and communication throughout the multigrid hierarchy. However, when coarsening is not permitted to be dependent on the operator, anisotropy must be addressed by the smoother — producing error compatible for coarse-grid correction with structured coarsening. Here, the components required in a scalable parallel structured solver are described with a focus on memory and communication efficiency of robust smoothers. While the implementation of communication and memory reduction techniques in smoothers integrated in a complete 3D solver present a significant engineering challenge, a novel approach is proposed that addresses these challenges systematically through a change to the solver’s execution model. Enabled by user-level threading paired with a set of data and communication abstractions, this approach permits seamless aggregation of communication in plane smoothers — directly reusing code for a 2D distributed multilevel cycle. Results show an effective reduction in communication costs for coarse-grid problems, and result in a speedup of 8.7x in smoothing routines shown in Fig. 12 using this approach. This produces a significant improvement to strong scalability while maintaining favorable weak scaling behavior. Finally, a parallel scaling study using a series of refined meshes is included that demonstrates the effectiveness of this approach in an application of interest.

97 MATHEMATICS AND COMPUTING↗

A Look Inside the Black Box: Using graph-theoretical descriptors to interpret a Continuous-Filter Convolutional Neural Network (CF-CNN) trained on the global and local minimum energy structures of neutral water clusters

A Continuous Filter Convolutional Neural Network (CF-CNN) was trained to predict the potential energy of water cluster networks \ce{(H2O)_{\textit{N}}}, \textit{N}=10--30, corresponding to local minima lying within 5 kcal/mol from the putative minima taken from a newly published database containing over 5 million unique networks. The chemical sampling space of the database was characterized using chemical descriptors derived from graph theory, which led to the identification of important trends in the topology, connectivity, polygon structures associated with the various networks as a function of cluster size. The resulting graphs are available alongside the original database at \url{https://sites.uw.edu/wdbase/}. The CF-CNN trained on a subset of 500,000 networks for (\textit{N}=10, 30) yielded a mean absolute error of 0.002$\pm$0.002 kcal/mol per water molecule, giving the trained CF-CNN the highest accuracy of any neural network-based surrogate model to date. In addition, clusters of sizes not included in the training set exhibited errors of the same magnitude, indicating that the CF-CNN ptotocol is general enough to accurately predict energies of networks for both smaller and larger sizes than those used during training. The graph-theoretical descriptors were developed in order to analyze the properties of the full database and interpret the predictive power of the CF-CNN. Using topology measures, such as the Wiener index and the average shortest path length along with two similarity measures, we showed that all networks from the test set were within the range of the ones from the training set, suggesting that the training set covered the chemical space of interest quite well. Our graph analysis suggests that the mean degree and number of polygons for networks with larger errors tend to lie further from the mean than those with lower errors. The generality of the used CF-CNN was thus demonstrated, while the use of the graph-theoretical descriptors assisted in interpreting the predicted results.

Bilbrey, Jenna A.↗

Real-time estimators for scattering observables: A full account of finite-volume errors for quantum simulation

The real-time correlators of quantum field theories can be directly probed through new approaches to simulation, such as quantum computing and tensor networks. This provides a new framework for computing scattering observables in lattice formulations of strongly interacting theories, such as lattice quantum chromodynamics. In this paper, we prove that the proposal of real-time estimators of scattering observables is universally applicable to all scattering observables of gapped quantum field theories. All finite-volume errors are exponentially suppressed, and the rate of this suppression is controlled by the regulator considered, namely, a displacement of the spectrum of the theory into the complex plane. A partial restoration of Lorentz symmetry by averaging over different boosts gives an additional suppression of finite volume errors. Our results also apply to the simulation of wave packet scattering, where a similar averaging is performed to construct the wave packets that regulate the finite volume effects. This result represents a necessary key step toward determining a broad class of scattering observables via quantum computing that are currently inaccessible via classical computing. Such observables are relevant for various applications, including hadron spectroscopy, hadron structure, and precision tests of the Standard Model. We also comment on potential applications of our results to traditional computational schemes.

Burbano, Ivan M. [University of California, Berkel↗

Common Electric Power Transmission System Model JSON Schema Specification

The Common Electric Power Transmission System Model (CTM) is an intuitive, extensible, language-agnostic, and error-resistant specification of electric power network components parameter names and units, and relation between components, intended for use by the research community developing new computational methods for power systems operations and simulation. Power system datasets following the CTM specification can be read as dictionaries and manipulated in that form in most programming languages (e.g., Python, Julia, C++). This standard data structure in CTM makes it easy to work in multiple power systems domains (e.g., economic operation, reliability assessment, electricity markets, stability assessment, etc.) without requiring conversions between use-case-specific file formats with information loss in the process. This repository specifies CTM as a JSON Schema, provides documentation, derivate (code-generated) implementations of CTM, and example data and usage of the schema for important use cases.

Aravena Solis, Ignacio↗

A mathematical analysis of the theory of interplanetary scintillation in the weak scattering approximation

A simplified analytical technique is presented for modeling the interplanetary scintillation of radio sources of finite angular size with a power-law electron-density-fluctuation power spectrum. The simplification results from the representation of the scintillation spectrum in confluent hypergeometric functions. The approximations presented allow fast numerical evaluation of a spectrum for a weakly scattering but extended medium with less than 10% error over the entire spectrum. Parameters describing anisotropic electron irregularities as well as anisotropic source structure are included, and the dependence of the spectrum normalization on the scales of the medium is derived explicitly. The parametric description of the domains of convergence of the approximate expansions also provides a simple conceptualization of the relative contributions of the scattered radiation along the line of sight to the observed spectrum. This is particularly useful for sources of finite angular size. This technique is applied to previously published observations.

Mitchell, D. G.↗

Wideband Disturbance Accomodation in Precision Flexible Space Structures

Numerous spacecraft missions currently being formulated exhibit several basic and sharply conflicting features: selected components (e.g., an optical train) of inherently flexible structures are to maintain precision pointing performance in a wideband disturbance environment. Within the overall process of synthesizing an active controller to deal with this difficult problem, the aspects of reduced-order modelling and of actuator and sensor selection are crucial to the successful implementation of any controller feedback strategy. The principal focus in this paper is on the influence of actuator and sensor selection upon the effectiveness of a specified controller strategy for wideband disturbance accommodation. A genetic optical support structure is used for a number of design examples. Active transducer selections are made systematically based upon their direct contributuion to optical pointing error. Controller designs incorporating the various transducer selections exhibit stability in the presence of unmodeled modes over a frequency range substantially beyond the bandwidth of the disturbance.

Hegg, D. R.↗

A simulation study of the flight dynamics of elastic aircraft. Volume 2: Data

The simulation experiment described addresses the effects of structural flexibility on the dynamic characteristics of a generic family of aircraft. The simulation was performed using the NASA Langley VMS simulation facility. The vehicle models were obtained as part of this research project. The simulation results include complete response data and subjective pilot ratings and comments and so allow a variety of analyses. The subjective ratings and analysis of the time histories indicate that increased flexibility can lead to increased tracking errors, degraded handling qualities, and changes in the frequency content of the pilot inputs. These results, furthermore, are significantly affected by the visual cues available to the pilot.

Waszak, Martin R.↗

On-Orbit Model Refinement for Controller Redesign

High performance control design for a flexible space structure is challenging since high fidelity plant models are difficult to obtain a priori. Uncertainty in the control design models typically require a very robust, low performance control design which must be tuned on-orbit to achieve the required performance. A new procedure for refining a multivariable open loop plant model based on closed-loop response data is presented. Using a minimal representation of the state space dynamics, a least squares prediction error method is employed to estimate the plant parameters. This control-relevant system identification procedure stresses the joint nature of the system identification and control design problem by seeking to obtain a model that minimizes the difference between the predicted and actual closed-loop performance. This paper presents an algorithm for iterative closed-loop system identification and controller redesign along with illustrative examples.

Whorton, Mark S.↗

Full circle mechanical dynamic characterization including experimental modal analysis and finite element analysis

During operation, it was observed that a specific mechanical system experienced undesirable vibration and it became necessary to understand and mitigate this phenomenon. This document investigates the tools, methodology, and results of the dynamic characterization of the system. The characterization makes use of the experimental modal analysis (EMA) methods of single input multiple output (SIMO) and single input single output (SISO). The validity of the theory of reciprocity is confirmed to minimize measurement error, cost, and time of repeat testing. Finite element analysis (FEA) is used in choosing transducer and modal impact locations to adequately characterize the system. Single degree of freedom (SDOF) and multiple degree of freedom (MDOF) curve fitting is used to fully characterize the system’s mode shapes and natural frequencies. The EMA characterization results are used to modify and validate the FEA model so that FEA can be used to model potential structural modifications to the system to mitigate the undesirable vibration. Structural modifications are chosen, implemented, and their effectiveness is quantified using EMA. Finally, a qualitative evaluation of the methodology of FEA validation by EMA and tuning of the model to match the experimental results is discussed.

42 ENGINEERING↗

An integrated model-driven method for in-treatment upper airway motion tracking using cine MRI in head and neck radiation therapy

Purpose: For the first time, MRI-guided radiation therapy systems can acquire cine images to dynamically monitor in-treatment internal organ motion. However, the complex head and neck (H&N) structures and low-contrast/resolution of on-board cine MRI images make automatic motion tracking a very challenging task. In this study, the authors proposed an integrated model-driven method to automatically track the in-treatment motion of the H&N upper airway, a complex and highly deformable region wherein internal motion often occurs in an either voluntary or involuntary manner, from cine MRI images for the analysis of H&N motion patterns. Methods: Considering the complex H&N structures and ensuring automatic and robust upper airway motion tracking, the authors firstly built a set of linked statistical shapes (including face, face-jaw, and face-jaw-palate) using principal component analysis from clinically approved contours delineated on a set of training data. The linked statistical shapes integrate explicit landmarks and implicit shape representation. Then, a hierarchical model-fitting algorithm was developed to align the linked shapes on the first image frame of a to-be-tracked cine sequence and to localize the upper airway region. Finally, a multifeature level set contour propagation scheme was performed to identify the upper airway shape change, frame-by-frame, on the entire image sequence. The multifeature fitting energy, including the information of intensity variations, edge saliency, curve geometry, and temporal shape continuity, was minimized to capture the details of moving airway boundaries. Sagittal cine MR image sequences acquired from three H&N cancer patients were utilized to demonstrate the performance of the proposed motion tracking method. Results: The tracking accuracy was validated by comparing the results to the average of two manual delineations in 50 randomly selected cine image frames from each patient. The resulting average dice similarity coefficient (93.28% ± 1.46%) and margin error (0.49 ± 0.12 mm) showed good agreement between the automatic and manual results. The comparison with three other deformable model-based segmentation methods illustrated the superior shape tracking performance of the proposed method. Large interpatient variations of swallowing frequency, swallowing duration, and upper airway cross-sectional area were observed from the testing cine image sequences. Conclusions: The proposed motion tracking method can provide accurate upper airway motion tracking results, and enable automatic and quantitative identification and analysis of in-treatment H&N upper airway motion. By integrating explicit and implicit linked-shape representations within a hierarchical model-fitting process, the proposed tracking method can process complex H&N structures and low-contrast/resolution cine MRI images. Future research will focus on the improvement of method reliability, patient motion pattern analysis for providing more information on patient-specific prediction of structure displacements, and motion effects on dosimetry for better H&N motion management in radiation therapy.

60 APPLIED LIFE SCIENCES↗

Effects of Injected Current Streams on MHD Equilibrium Reconstruction of Local Helicity Injection Plasmas in a Spherical Tokamak

Open field line currents are intrinsic to DC helicity injection plasma startup and pose a challenge for inferring the plasma equilibrium with standard reconstruction analysis. Local helicity injection (LHI) is a type of DC helicity injection which uses small, modular current sources to drive force-free current along helical field lines to produce tokamak plasmas. MHD modeling and magnetic measurements during LHI indicate the injected current streams remain coherent as helical structures on the outboard edge of a core toroidal plasma that is tokamak-like in a toroidally averaged sense. To extract core plasma equilibrium properties, external magnetic diagnostics corrected for contributions from the injected current streams are fitted by a standard Grad-Shafranov equilibrium code. An iterative approach for estimating and subtracting the stream contributions from the diagnostic signals is described and applied to a model equilibrium database to reduce systematic errors introduced by the streams. Convergence is usually attained with 2 to 4 iterations, with derived equilibrium parameters matching the prescribed axisymmetric core values to within estimated experimental uncertainties. Accurate recovery of core parameters occurs when the ratio of the net toroidal windup current from the streams to the core plasma current is less than 0.2, which is typically satisfied in most experiments.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Solvent Dynamics Are Critical to Understanding Carbon Dioxide Dissolution and Hydration in Water

Simulations of carbon dioxide (CO 2 ) in water may aid in understanding the impact of its accumulation in aquatic environments and help advance technologies for carbon capture and utilization (via, e.g., mineralization). Quantum mechanical (QM) simulations based on static molecular models with polarizable continuum solvation poorly reproduce the energetics of CO 2 hydration to form carbonic acid in water, independent of the level of QM theory employed. Only with density-functional-theory-based molecular dynamics and rare-event sampling, followed by energy corrections based on embedded correlated wavefunction theory (in conjunction with density functional embedding theory), can a close agreement between theory and experiment be achieved. Such multilevel simulations can serve as benchmarks for simpler, less costly models, giving insight into potential errors of the latter. The strong influence of sampling/averaging over dynamical solvent configurations on the energetics stems from the difference in polarity of both the transition state and product (both polar) versus the reactant (nonpolar). When a solute undergoes a change in polarity during reaction, affecting its interaction with the solvent, careful assessment of the energetic contribution of the solvent response to this change is critical. Here, we show that static models (without structural sampling) that incorporate three explicit water molecules can yield far superior results than models with more explicit water molecules because fewer water molecules yield less configurational artifacts. Static models intelligently incorporating both explicit (molecules directly participating in the reaction) and implicit solvation, along with a proper QM theory, e.g., CCSD(T) for closed-shell systems, can close the accuracy gap between static and dynamic models.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Dark Energy Survey Year 3 results: Constraints on extensions to Λ CDM with weak lensing and galaxy clustering

We constrain six possible extensions to the Λ cold dark matter (CDM) model using measurements from the Dark Energy Survey’s first three years of observations, alone and in combination with external cosmological probes. The DES data are the two-point correlation functions of weak gravitational lensing, galaxy clustering, and their cross-correlation. We use simulated data vectors and blind analyses of real data to validate the robustness of our results to astrophysical and modeling systematic errors. In many cases, constraining power is limited by the absence of theoretical predictions beyond the linear regime that are reliable at our required precision. The Λ CDM extensions are dark energy with a time-dependent equation of state, nonzero spatial curvature, additional relativistic degrees of freedom, sterile neutrinos with eV-scale mass, modifications of gravitational physics, and a binned σ 8 ( z ) model which serves as a phenomenological probe of structure growth. For the time-varying dark energy equation of state evaluated at the pivot redshift we find ( w p , w a ) = ( - 0.9 9 - 0.17 + 0.28 , - 0.9 ± 1.2 ) at 68% confidence with z p = 0.24 from the DES measurements alone, and ( w p , w a ) = ( - 1.0 3 - 0.03 + 0.04 , - 0. 4 - 0.3 + 0.4 ) with z p = 0.21 for the combination of all data considered. Curvature constraints of Ω k = 0.0009 ± 0.0017 and effective relativistic species N eff = 3.1 0 - 0.16 + 0.15 are dominated by external data, though adding DES information to external low-redshift probes tightens the Ω k constraints that can be made without cosmic microwave background observables by 20%. For massive sterile neutrinos, DES combined with external data improves the upper bound on the mass m eff by a factor of 3 compared to previous analyses, giving 95% limits of ( Δ N eff , m eff ) ≤ ( 0.28 , 0.20 eV ) when using priors matching a comparable Planck analysis. For modified gravity, we constrain changes to the lensing and Poisson equations controlled by functions Σ ( k , z ) = Σ 0 Ω Λ ( z ) / Ω Λ , 0 and μ ( k , z ) = μ 0 Ω Λ ( z ) / Ω Λ , 0 , respectively, to Σ 0 = 0. 6 - 0.5 + 0.4 from DES alone and ( Σ 0 , μ 0 ) = ( 0.04 ± 0.05 , 0.0 8 - 0.19 + 0.21 ) for the combination of all data, both at 68% confidence. Overall, we find no significant evidence for physics beyond Λ CDM .

79 ASTRONOMY AND ASTROPHYSICS↗

Cosmic distance inference from purely geometric BAO methods: Linear point standard ruler and correlation function model fitting

Leveraging the baryon acoustic oscillations (BAO) feature present in clustering 2-point statistics, we aim to measure cosmological distances independently of the underlying background cosmological model. However this inference is complicated by late-time nonlinearities that introduce model and tracer dependencies in the clustering correlation function and power spectrum, which must be properly accounted for. With this in mind, we introduce the “purely geometric-BAO,” which provides a rigorous tool to measure cosmological distances without assuming a specific background cosmology. We focus on the 2-point clustering correlation function monopole, and show how to implement such an inference scheme employing two different methodologies: the linear point standard ruler (LP) and correlation-function model-fitting (CF-MF). For the first time we demonstrate how, by means of the CF-MF, we can measure very precisely the sound-horizon/isotropic-volume-distance ratio, r d /DV(z¯), while correctly propagating all the uncertainties. Using synthetic data, we compare the outcomes of the two methodologies, and find that the LP provides up to 50% more precise measurements than the CF-MF. Finally, we test a procedure widely employed in BAO analyses: fitting the 2-point function while fixing the cosmological and the non-linear-damping parameters at fiducial values. We find that this underestimates the distance errors by nearly a factor of 2. Furthermore, we recommend that this practice be reconsidered, whether for parameter determination or model selection.

79 ASTRONOMY AND ASTROPHYSICS↗

The Atacama Cosmology Telescope: A Measurement of the DR6 CMB Lensing Power Spectrum and Its Implications for Structure Growth

We present new measurements of cosmic microwave background (CMB) lensing over 9400 deg of the sky. These lensing measurements are derived from the Atacama Cosmology Telescope (ACT) Data Release 6 (DR6) CMB data set, which consists of five seasons of ACT CMB temperature and polarization observations. We determine the amplitude of the CMB lensing power spectrum at 2.3% precision (43σ significance) using a novel pipeline that minimizes sensitivity to foregrounds and to noise properties. To ensure that our results are robust, we analyze an extensive set of null tests, consistency tests, and systematic error estimates and employ a blinded analysis framework. Our CMB lensing power spectrum measurement provides constraints on the amplitude of cosmic structure that do not depend on Planck or galaxy survey data, thus giving independent information about large-scale structure growth and potential tensions in structure measurements. The baseline spectrum is well fit by a lensing amplitude of A lens = 1.013 ± 0.023 relative to the Planck 2018 CMB power spectra best-fit ΛCDM model and A lens = 1.005 ± 0.023 relative to the ACT DR4 + WMAP best-fit model. From our lensing power spectrum measurement, we derive constraints on the parameter combination $S^{CMBL}_{8}$ ≡ σ 8 (Ω m /0.3) 0.25 of $S^{CMBL}_{8}$ = 0.818 ± 0.022 from ACT DR6 CMB lensing alone and $S^{CMBL}_{8}$ = 0.813 ± 0.018 when combining ACT DR6 and Planck NPIPE CMB lensing power spectra. These results are in excellent agreement with ΛCDM model constraints from Planck or ACT DR4 + WMAP CMB power spectrum measurements. Our lensing measurements from redshifts z ~ 0.5–5 are thus fully consistent with ΛCDM structure growth predictions based on CMB anisotropies probing primarily z ~ 1100. We find no evidence for a suppression of the amplitude of cosmic structure at low redshifts.

79 ASTRONOMY AND ASTROPHYSICS↗

The impact of hurricane disturbances on a tropical forest: implementing a palm plant functional type and hurricane disturbance module in ED2-HuDi V1.0

Hurricanes commonly disturb and damage tropical forests. Hurricane frequency and intensity are predicted to change under the changing climate. The short-term impacts of hurricane disturbances to tropical forests have been widely studied, but the long-term impacts are rarely investigated. Modeling is critical to investigate the potential response of forests to future disturbances, particularly if the nature of the disturbances is changing with climate. Unfortunately, existing models of forest dynamics are not presently able to account for hurricane disturbances. Therefore, we implement the Hurricane Disturbance in the Ecosystem Demography model (ED2) (ED2-HuDi). The hurricane disturbance includes hurricane-induced immediate mortality and subsequent recovery modules. The parameterizations are based on observations at the Bisley Experimental Watersheds (BEW) in the Luquillo Experimental Forest in Puerto Rico. We add one new plant functional type (PFT) to the model – Palm, as palms cannot be categorized into one of the current existing PFTs and are known to be an abundant component of tropical forests worldwide. The model is calibrated with observations at BEW using the generalized likelihood uncertainty estimation (GLUE) approach. The optimal simulation obtained from GLUE has a mean relative error of –21 %, –12 %, and –15 % for stem density, basal area, and aboveground biomass, respectively. The optimal simulation also agrees well with the observation in terms of PFT composition (+1 %, –8 %, –2 %, and +9 % differences in the percentages of “Early”, “Mid”, “Late”, and “Palm” PFTs, respectively) and size structure of the forest (+0.8 % differences in the percentage of large stems). Lastly, using the optimal parameter set, we study the impact of forest initial condition on the recovery of the forest from a single hurricane disturbance. The results indicate that, compared to a no-hurricane scenario, a single hurricane disturbance has little impact on forest structure (+1 % change in the percentage of large stems) and composition (<1 % change in the percentage of each of the four PFTs) but leads to 5 % higher aboveground biomass after 80 years of succession. The assumption of a less severe hurricane disturbance leads to a 4 % increase in aboveground biomass.

54 ENVIRONMENTAL SCIENCES↗

A two-layer diagnostic model of the long-term physical evolution of warm-core ring 82B

The present shipboard data in the 1982 time series on a single Gulf Stream warm core ring are composited on a cylindrical coordinate system following ring motion; 10 C-isotherm depth measurements are used in a two-layer model of the ring's structure to compute gradient current, kinetic energy, available potential energy (APE), and potential vorticity. The ring's evolution can be divided into two periods: April-late June, while the ring is isolated from strong Gulf Stream interaction, during which the ring loses APE at a low rate, and from July onward, following ring interactions with the Gulf Stream and topography with much higher energy loss. Within measurement errors, the potential vorticity at the center of the ring is conserved from April through August, implying nearly inviscid dynamics.

Olson, D. B.↗

The effect of the dynamic wet troposphere on radio interferometric measurements

A statistical model of water vapor fluctuations is used to describe the effect of the dynamic wet troposphere on radio interferometric measurements. It is assumed that the spatial structure of refractivity is approximated by Kolmogorov turbulence theory, and that the temporal fluctuations are caused by spatial patterns moved over a site by the wind, and these assumptions are examined for the VLBI delay and delay rate observables. The results suggest that the delay rate measurement error is usually dominated by water vapor fluctuations, and water vapor induced VLBI parameter errors and correlations are determined as a function of the delay observable errors. A method is proposed for including the water vapor fluctuations in the parameter estimation method to obtain improved parameter estimates and parameter covariances.

Treuhaft, R. N.↗