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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,117 records · Page 62

An enhanced AUSM + -up scheme for high-speed compressible two-phase flows on hybrid grids

Here in this work, an enhanced AUSM + -up scheme is presented for high-speed compressible two-phase flows using a six-equation two-fluid single-pressure model. Based on the observation that the AUSM + -up flux function does not take into account relative velocity between the two phases and thus is not stable and robust for computation of two-phase flows involving interaction of strong shock waves and material interfaces, the enhancement is in the form of a volume fraction coupling term and a modification of the velocity diffusion term, both proportional to the relative velocity between the two phases. These modifications in the flux function obviate the need to employ the exact Riemann solver, leading to a significantly less expensive yet robust flux scheme. Furthermore, the Tangent of Hyperbola for INterface Capturing (THINC) scheme is used in order to provide a sharp resolution for material interfaces. A number of benchmark test cases are presented to assess the performance and robustness of the enhanced AUSM + -up scheme for compressible two-phase flows on hybrid unstructured grids. Lastly, the numerical experiments demonstrate that the enhanced AUSM + -up scheme along with THINC scheme can efficiently compute high-speed two-fluid flows such as shock–bubble interactions, while accurately capturing material interfaces.

42 ENGINEERING↗

Spectral Signatures for the Classification of Microbial Species using Raman Spectra

In general, classification-based methods based on Confocal Raman microscopy are focused on targeted studies under which the spectral libraries are collected under controlled instrument parameters, which facilitate analyses via standard multivariate data analysis methods and cross-validation. We develop and compare approaches to combine spectra collected at different times and varying levels of spectral resolution into a single spectral library. We demonstrate these approaches on a relevant test case; the identification of microbial species from a natural environment.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Incremental projection approach of regularization for inverse problems

This paper presents an alternative approach to the regularized least squares solution of ill-posed inverse problems. Instead of solving a minimization problem with an objective function composed of a data term and a regularization term, the regularization information is used to define a projection onto a convex subspace of regularized candidate solutions. The objective function is modified to include the projection of each iterate in the place of the regularization. Numerical experiments based on the problem of motion estimation for geophysical fluid images, show the improvement of the proposed method compared with regularization methods. For the presented test case, the incremental projection method uses 7 times less computation time than the regularization method, to reach the same error target. Moreover, at convergence, the incremental projection is two order of magnitude more accurate than the regularization method.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Mean Field Type Control with Congestion (II): An Augmented Lagrangian Method

This work deals with a numerical method for solving a mean-field type control problem with congestion. It is the continuation of an article by the same authors, in which suitably defined weak solutions of the system of partial differential equations arising from the model were discussed and existence and uniqueness were proved. Here, the focus is put on numerical methods: a monotone finite difference scheme is proposed and shown to have a variational interpretation. Then an Alternating Direction Method of Multipliers for solving the variational problem is addressed. It is based on an augmented Lagrangian. Two kinds of boundary conditions are considered: periodic conditions and more realistic boundary conditions associated to state constrained problems. Various test cases and numerical results are presented.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

New generation NMR bioreactor coupled with high-resolution NMR spectroscopy leads to novel discoveries in Moorella thermoaceticum metabolic profiles

An in-situ nuclear magnetic resonance (NMR) bioreactor was developed and employed to monitor microbial metabolism under batch-growth conditions in real time. We selected Moorella thermoacetica ATCC 49707 as a test case. M. thermoacetica (formerly Clostridium thermoaceticum) is a strictly anaerobic, thermophilic, acetogenic, gram-positive bacterium with potential for industrial production of chemicals. The metabolic profiles of M. thermoacetica were characterized during growth in batch mode on xylose (a component of lignocellulosic biomass) using the new generation NMR bioreactor in combination with high-resolution, high sensitivity NMR (HR-NMR) spectroscopy. In-situ NMR measurements were performed using water-suppressed H-1 NMR spectroscopy at an NMR frequency of 500 MHz, and aliquots of the bioreactor contents were taken for 600 MHz HR-NMR spectroscopy at specific intervals to confirm metabolite identifications and expand metabolite coverage. M. thermoacetica demonstrated the metabolic potential to produce formate, ethanol and methanol from xylose, in addition to its known capability of producing acetic acid. Real-time monitoring of bioreactor conditions showed a temporary pH decrease, with a concomitant increase in formic acid during exponential growth. Fermentation experiments performed outside of the magnet showed that the strong magnetic field employed for NMR detection did not significantly affect cell metabolism. Use of the in-situ NMR bioreactor facilitated monitoring of the fermentation process in real time, enabling identification of intermediate and end-point metabolites and their correlation with pH and biomass produced during culture growth. Real-time monitoring of culture metabolism using the NMR bioreactor in combination with the HR-NMR spectroscopy will allow optimization of the metabolism of microorganisms producing valuable bioproducts.

Bioproducts↗

Calculating the Symmetry Number of Flexible Sphere Clusters

We present a theoretical and computational framework to compute the symmetry number of a flexible sphere cluster in R 3 , using a definition of symmetry that arises naturally when calculating the equilibrium probability of a cluster of spheres in the sticky-sphere limit. We define the sticky symmetry group of the cluster as the set of permutations and inversions of the spheres which preserve adjacency and can be realized by continuous deformations of the cluster that do not change the set of contacts or cause particles to overlap. The symmetry number is the size of the sticky symmetry group. We introduce a numerical algorithm to compute the sticky symmetry group and symmetry number, and show it works well on several test cases. Furthermore, we show that once the sticky symmetry group has been calculated for indistinguishable spheres, the symmetry group for partially distinguishable spheres (those with nonidentical interactions) can be efficiently obtained without repeating the laborious parts of the computations. Finally, we use our algorithm to calculate the partition functions of every possible connected cluster of six identical sticky spheres, generating data that may be used to design interactions between spheres so they self-assemble into a desired structure.

97 MATHEMATICS AND COMPUTING↗

Optimization of stepwise clustering algorithm in backward trajectory analysis

In recent years, the backward trajectory model has been widely used in the research of meteorological and atmospheric environmental quality. This paper presents a comprehensive study on a stepwise clustering analysis algorithm in the clustering process of backward trajectory model and an application of the clustering analysis of single-particle backward trajectory in 2016 in Changchun City. This study starts with an analysis of the original stepwise clustering algorithm and its application to a clustering process of 8784 backward trajectories during 48 h in Changchun City as a benchmark test case. Then, two improvements are made in the algorithm: First, in the process of finding the optimal classification, the algorithm complexity is improved from original O(n 3 ) to O(log(n)*n 2 ) through algorithm improvement. The algorithm performance is enhanced by log(n) times. Next, in the process of re-establishing the classification, the algorithm complexity is improved from the original O(m*n 2 ) to O(m*log(n)*n), that is another algorithm performance improvement by a factor of log(n). Therefore, the accumulative execution efficiency improvement through the algorithm optimization is 2*log(n) times, which has been further verified in the practical application in Changchun City.

97 MATHEMATICS AND COMPUTING↗

Calculation of Expectation Values of Operators in the Complex Scaling Method

In the complex scaling method (CSM) provides with a way to obtain resonance parameters of particle unstable states by rotating the coordinates and momenta of the original Hamiltonian. It is convenient to use an L 2 integrable basis to resolve the complex rotated or complex scaled Hamiltonian H θ , with θ being the angle of rotation in the complex energy plane. Within the CSM, resonance and scattering solutions have fall-off asymptotics. Furthermore, one of the consequences is that, expectation values of operators in a resonance or scattering complex scaled solution are calculated by complex rotating the operators. In this work we are exploring applications of the CSM on calculations of expectation values of quantum mechanical operators by using the regularized backrotation technique and calculating hence the expectation value using the unrotated operator. Moreover, the test cases involve a schematic two-body Gaussian model and also applications using realistic interactions.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Multi-regime mixing modeling for local extinction and re-ignition in turbulent non-premixed flame by using LES/FDF method

Local extinction and re-ignition occur in turbulent non-premixed combustion when the Damköhler number is not large enough and the combustion is not fully mixing controlled. The occurrence of local extinction introduces locally extinguished flame holes followed by a premixed flame propagation toward the hole center to potentially reignite the flame. The co-existence of the non-premixed and premixed combustion regimes complicates the modeling since traditional combustion models are mostly for a single regime. In this work, we examine the effect of multi-regime mixing modeling in the transported filtered density function (FDF) method on the predictions of local extinction and reignition. Predictions of local extinction and reignition remain a challenge for the FDF method despite the progress made in the past. To account for the multi-regime combustion, two different mixing timescale models for non-premixed and premixed combustion are combined. A flame index based on the gradients of fuel and oxidizer is used to define a weighting factor to blend the two mixing timescale models. A turbulent jet non-premixed flame with substantial local extinction, the Sydney piloted jet flame L, is adopted as a test case to examine the performance of the multi-regime model in large-eddy simulation/FDF modeling. It is found that the traditional non-premixed mixing timescale model when combined with the modified Curl mixing leads to global extinction for the Sydney flame L without the presence of the premixed combustion regime. After accounting for the multi-regime combustion with proper detection of the different combustion regimes, the predictions for the flame statistics and the amount of local extinction are significantly improved. Furthermore, it suggests the need of including multi-regime combustion for the predictions of local extinction and re-ignition in turbulent non-premixed combustion configurations.

42 ENGINEERING↗

MDTri: robust and efficient global mixed integer search of spaces of multiple ternary alloys: A DIRECT-inspired optimization algorithm for experimentally accessible computational material design

Computational materials design has suffered from a lack of algorithms formulated in terms of experimentally accessible variables. Here we formulate the problem of (ternary) alloy optimization at the level of choice of atoms and their composition that is normal for synthesists. Mathematically, this is a mixed integer problem where a candidate solution consists of a choice of three elements, and how much of each of them to use. This space has the natural structure of a set of equilateral triangles. We solve this problem by introducing a novel version of the DIRECT algorithm that (1) operates on equilateral triangles instead of rectangles and (2) works across multiple triangles. We demonstrate on a test case that the algorithm is both robust and efficient. Lastly, we offer an explanation of the efficacy of DIRECT -- specifically, its balance of global and local search -- by showing that 'potentially optimal rectangles' of the original algorithm are akin to the Pareto front of the 'multi-component optimization' of global and local search.

97 MATHEMATICS AND COMPUTING↗

Algorithmically scalable block preconditioner for fully implicit shallow-water equations in CAM-SE

Performing accurate and efficient numerical simulation of global atmospheric climate models is challenging due to the disparate length and time scales over which physical processes interact. Implicit solvers enable the physical system to be integrated with a time step commensurate with processes being studied. The dominant cost of an implicit time step is the ancillary linear system solves, so we have developed a preconditioner aimed at improving the efficiency of these linear system solves. Our preconditioner is based on an approximate block factorization of the linearized shallow-water equations and has been implemented within the spectral element dynamical core within the Community Atmospheric Model (CAM-SE). Furthermore, in this paper we discuss the development and scalability of the preconditioner for a suite of test cases with the implicit shallow-water solver within CAM-SE.

97 MATHEMATICS AND COMPUTING↗

Analysis and Entropy Stability of the Line-Based Discontinuous Galerkin Method

We develop a discretely entropy-stable line-based discontinuous Galerkin method for hyperbolic conservation laws based on a flux differencing technique. By using standard entropy-stable and entropy-conservative numerical flux functions, this method guarantees that the discrete integral of the entropy is non-increasing. This nonlinear entropy stability property is important for the robustness of the method, in particular when applied to problems with discontinuous solutions or when the mesh is under-resolved. This line-based method is significantly less computationally expensive than a standard DG method. Numerical results are shown demonstrating the effectiveness of the method on a variety of test cases, including Burgers’ equation and the Euler equations, in one, two, and three spatial dimensions.

97 MATHEMATICS AND COMPUTING↗

Strong Stability Preserving Integrating Factor Two-Step Runge-Kutta Methods

In this report, problems with components that feature significantly different time scales, where the stiff time-step restriction comes from a linear component, implicit-explicit (IMEX) methods alleviate this restriction if the concern is linear stability. However, when nonlinear non-inner-product stability properties are of interest, such as in the evolution of hyperbolic partial differential equations with shocks or sharp gradients, linear inner-product stability is no longer sufficient for convergence, and so strong stability preserving (SSP) methods are often needed. Where the SSP property is needed, IMEX SSP Runge-Kutta (SSP-IMEX) methods have very restrictive time-steps. An alternative to SSP-IMEX schemes is to adopt an integrating factor approach to handle the linear component exactly and step the transformed problem forward using some time-evolution method. The strong stability properties of integrating factor Runge-Kutta methods were established in Isherwood et al. (SIAM J Numer Anal 56(6):3276–3307, 2018), where it was shown that it is possible to define explicit integrating factor Runge-Kutta methods that preserve strong stability properties satisfied by each of the two components when coupled with forward Euler time-stepping. It was proved that the solution will be SSP if the transformed problem is stepped forward with an explicit SSP Runge-Kutta method that has non-decreasing abscissas. However, explicit SSP Runge-Kutta methods have an order barrier of p=4, and sometimes higher order is desired. In this work we consider explicit SSP two-step Runge-Kutta integrating factor methods to raise the order. We show that strong stability is ensured if the two-step Runge-Kutta method used to evolve the transformed problem is SSP and has non-decreasing abscissas. We find such methods up to eighth order and present their SSP coefficients. Adding a step allows us to break the fourth order barrier on explicit SSP Runge-Kutta methods; furthermore, our explicit SSP two-step Runge-Kutta methods with non-decreasing abscissas typically have larger SSP coefficients than the corresponding one-step methods. A selection of our methods are tested for convergence and demonstrate the design order. We also show, for selected methods, that the SSP time-step predicted by the theory is a lower bound of the allowable time-step for linear and nonlinear problems that satisfy the total variation diminishing (TVD) condition. We compare some of the non-decreasing abscissa SSP two-step Runge-Kutta methods to previously found methods that do not satisfy this criterion on linear and nonlinear TVD test cases to show that this non-decreasing abscissa condition is indeed necessary in practice as well as theory. We also compare these results to our SSP integrating factor Runge-Kutta methods designed in Isherwood et al. (2018).

97 MATHEMATICS AND COMPUTING↗

Conservative Numerical Schemes with Optimal Dispersive Wave Relations: Part II. Numerical Evaluations

A new energy and enstrophy conserving scheme (EEC) for the shallow water equations is proposed and evaluated using a suite of test cases over the global spherical or bounded domain. The evaluation is organized around a set of pre-defined properties: accuracy of individual operators, accuracy of the whole scheme, conservation of key quantities, control of the divergence variable, representation of the energy and enstrophy spectra, and simulation of nonlinear dynamics. The results confirm that the scheme is between the first and second order accurate, and conserves the total energy and potential enstrophy up to the time truncation errors. Here, the scheme is capable of producing more physically realistic energy and enstrophy spectra, indicating that it can help prevent the unphysical energy cascade towards the finest resolvable scales. With an optimal representation of the dispersive wave relations, the scheme is able to keep the flow close to being non-divergent, and maintain the geostrophically balanced structures with large-scale geophysical flows over long-term simulations.

54 ENVIRONMENTAL SCIENCES↗

A $C^1$-Conforming Arbitrary-Order Two-Dimensional Virtual Element Method for the Fourth-Order Phase-Field Equation

We present a two-dimensional conforming virtual element method for the fourth-order phase-field equation. Our proposed numerical approach to the solution of this high-order phase-field (HOPF) equation relies on the design of an arbitrary-order accurate, virtual element space with $C^1$ global regularity. Such regularity is guaranteed by taking the values of the virtual element functions and their full gradient at the mesh vertices as degrees of freedom. Attaining high-order accuracy requires also edge polynomial moments of the trace of the virtual element functions and their normal derivatives. In this work, we detail the scheme construction, and prove its convergence by deriving error estimates in different norms. A set of representative test cases allows us to assess the behavior of the method.

97 MATHEMATICS AND COMPUTING↗

Neural Active Manifolds: Nonlinear Dimensionality Reduction for Uncertainty Quantification

We present a new approach for nonlinear dimensionality reduction, specifically designed for computationally expensive mathematical models. We leverage autoencoders to discover a one-dimensional neural active manifold (NeurAM) capturing the model output variability, through the aid of a simultaneously learnt surrogate model with inputs on this manifold. Our method only relies on model evaluations and does not require the knowledge of gradients. The proposed dimensionality reduction framework can then be applied to assist outer loop many-query tasks in scientific computing, like sensitivity analysis and multifidelity uncertainty propagation. In particular, we prove, both theoretically under idealized conditions, and numerically in challenging test cases, how NeurAM can be used to obtain multifidelity sampling estimators with reduced variance by sampling the models on the discovered low-dimensional and shared manifold among models. Several numerical examples illustrate the main features of the proposed dimensionality reduction strategy and highlight its advantages with respect to existing approaches in the literature.

Autoencoders↗

Numerical Modeling of Gas-Liquid Compressible Pipe Flow Based on the Theory of Thermodynamically Compatible Systems

Based on the theory of thermodynamically compatible systems, we formulate the governing equations of a gas-liquid compressible pipe flow and develop the Runge–Kutta–TVD and Runge–Kutta–WENO high accuracy methods. The computational model is used to solve a series of test cases demonstrating its efficiency and capability to be applied to slug flows modeling.

42 ENGINEERING↗

Preliminary investigation of an uncertainty budget for uranium isotope ratio analysis using a liquid sampling—atmospheric pressure glow discharge—orbitrap mass spectrometer system

The liquid sampling-atmospheric pressure glow discharge (LS-APGD) ionization source has proven to be an effective analysis tool for making uranium isotope ratio measurements when coupled to high-resolution mass spectrometers, such as the Orbitrap. While previous studies have shown the capabilities of the LS-APGD for isotope ratio determination, a systematic evaluation of the measurement uncertainty of the technique has not been conducted. To this end, the International Standards Organizations (ISO) guidelines to the expression of uncertainty in measurement (GUM analysis) have been applied to generate an uncertainty budget. For this work, a preliminary assessment derived from the GUM analysis was performed. The uncertainty in the instrument blank determination has been identified as a primary factor contributing to measurement uncertainty for the LS-APGD-Orbitrap method. These findings for the specific test case of uranium isotopic analysis will be invaluable in applications across the breadth of isotope ratio mass spectrometry performed on this unique instrumental platform.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗