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At least 1,135 records · Page 63

Taming the terminological tempest in invasion science

ABSTRACT Standardised terminology in science is important for clarity of interpretation and communication. In invasion science – a dynamic and rapidly evolving discipline – the proliferation of technical terminology has lacked a standardised framework for its development. The result is a convoluted and inconsistent usage of terminology, with various discrepancies in descriptions of damage and interventions. A standardised framework is therefore needed for a clear, universally applicable, and consistent terminology to promote more effective communication across researchers, stakeholders, and policymakers. Inconsistencies in terminology stem from the exponential increase in scientific publications on the patterns and processes of biological invasions authored by experts from various disciplines and countries since the 1990s, as well as publications by legislators and policymakers focusing on practical applications, regulations, and management of resources. Aligning and standardising terminology across stakeholders remains a challenge in invasion science. Here, we review and evaluate the multiple terms used in invasion science (e.g. ‘non‐native’, ‘alien’, ‘invasive’ or ‘invader’, ‘exotic’, ‘non‐indigenous’, ‘naturalised’, ‘pest’) to propose a more simplified and standardised terminology. The streamlined framework we propose and translate into 28 other languages is based on the terms ( i ) ‘non‐native’, denoting species transported beyond their natural biogeographic range, ( ii ) ‘established non‐native’, i.e. those non‐native species that have established self‐sustaining populations in their new location(s) in the wild, and ( iii ) ‘invasive non‐native’ – populations of established non‐native species that have recently spread or are spreading rapidly in their invaded range actively or passively with or without human mediation. We also highlight the importance of conceptualising ‘spread’ for classifying invasiveness and ‘impact’ for management. Finally, we propose a protocol for classifying populations based on ( i ) dispersal mechanism, ( ii ) species origin, ( iii ) population status, and ( iv ) impact. Collectively and without introducing new terminology, the framework that we present aims to facilitate effective communication and collaboration in invasion science and management of non‐native species.

Soto, Ismael↗

Comparing nonrigid registration techniques for motion corrected MR prostate diffusion imaging

Purpose: T{sub 2}-weighted magnetic resonance imaging (MRI) is commonly used for anatomical visualization in the pelvis area, such as the prostate, with high soft-tissue contrast. MRI can also provide functional information such as diffusion-weighted imaging (DWI) which depicts the molecular diffusion processes in biological tissues. The combination of anatomical and functional imaging techniques is widely used in oncology, e.g., for prostate cancer diagnosis and staging. However, acquisition-specific distortions as well as physiological motion lead to misalignments between T{sub 2} and DWI and consequently to a reduced diagnostic value. Image registration algorithms are commonly employed to correct for such misalignment. Methods: The authors compare the performance of five state-of-the-art nonrigid image registration techniques for accurate image fusion of DWI with T{sub 2}. Results: Image data of 20 prostate patients with cancerous lesions or cysts were acquired. All registration algorithms were validated using intensity-based as well as landmark-based techniques. Conclusions: The authors’ results show that the “fast elastic image registration” provides most accurate results with a target registration error of 1.07 ± 0.41 mm at minimum execution times of 11 ± 1 s.

60 APPLIED LIFE SCIENCES↗

Genome Sequences of 42 Bacteria Isolated from Sorghum bicolor Roots

Forty-two bacterial strains were isolated from root samples of Sorghum bicolor. The strains spanned 17 genera, including Dechloromonas, Duganella, Dyella, Flavobacterium, Herbaspirillum, Lutibacter, Mucilaginibacter, Novosphingobium, Paraburkholderia, Pedobacter, Pleomorphomonas, Rhizobacter, Rhizobium, Rhizomicrobium, Rugamonas, Variovorax, and Xanthobacter. Their whole-genome sequences revealed diverse metabolic processes, including biological nitrogen fixation, in sorghum root microbiota.

59 BASIC BIOLOGICAL SCIENCES↗

Progress Report on the ISCR Pilot Test Conducted at the Former CCC/USDA Grain Storage Facility in Montgomery City, Missouri, as of April 2013

The Commodity Credit Corporation of the U.S. Department of Agriculture (CCC/USDA) is conducting an environmental investigation at the former CCC/USDA grain storage facility on the county fairgrounds in Montgomery City, Missouri, to evaluate contamination associated with the former use of grain fumigants containing carbon tetrachloride at the site. The CCC/USDA studies have identified carbon tetrachloride in the soils (primarily unconsolidated glacial tills) at concentrations that exceed the U.S. Environmental Protection Agency (EPA) regional screening level (RSL) values for this compound in residential soils (610 μg/kg) but are below the corresponding RSL for industrial soils (3,000 μg/kg). Concentrations of carbon tetrachloride greater than the EPA maximum contaminant level (MCL; 5.0 μg/L) for this contaminant in drinking water were also identified in the shallow groundwater (Argonne 2012). On the basis of these findings, remedial actions are considered necessary to mitigate the present and potential future impacts of the contamination. In cooperation with the Missouri Department of Natural Resources (MDNR), the CCC/USDA has initiated a field-scale pilot test to evaluate an in situ technology for treatment of the carbon tetrachloride contamination. In this approach, a chemical amendment consisting primarily of slow-release organic matter and zero-valent iron is employed to induce oxygen-depleted, chemically reducing conditions in the subsurface. These conditions foster the in situ chemical reduction (ISCR) of carbon tetrachloride and its degradation products (chloroform, methylene chloride, and chloromethane) via both inorganic and biologically mediated processes. The chemical amendment being used, EHC™, was developed by the Adventus Group, Freeport, Illinois, and is now manufactured and distributed by FMC Environmental Solutions, Philadelphia, Pennsylvania. With the approval of the MDNR (2012), the ISCR technology is being tested in two target areas interpreted to represent contaminant source areas. The pilot test is being implemented on behalf of the CCC/USDA by Argonne National Laboratory. Approximately 80,000 lb of the EHC material was injected by using direct-push techniques at 99 locations in the target areas, from November 9 to December 15, 2012 (Argonne 2012). To determine the geochemical effects of the pilot injections and their impact on the levels of contamination in the test areas, an extended monitoring program (Argonne 2012) is being implemented. The program includes an initial “baseline” sampling event to document pre-treatment conditions and periodic post-injection monitoring events, approximately 1, 2, 4, 6, 9, and 12 months after the completion of the injection program (Argonne 2012). This report provides a brief summary of the specific activities conducted, with a compilation of the monitoring data obtained, during the baseline sampling event (October 2012) and the first, second, and third post-injection monitoring events (in January, February, and April 2013).

54 ENVIRONMENTAL SCIENCES↗

Environmental Trade-Offs for a Process Utilizing Aerobic Respiration for Biological Conversion of Cellulosic Biomass-Derived Sugars to Hydrocarbons (Renewable Diesel Blendstock): Cooperative Research and Development Final Report, CRADA Number CRD-18-00765, Project 1

Phase II work is meant to develop an advanced understanding of how production of a renewable diesel blendstock from lignocellulosic biomass feedstocks via aerobic respiration at different production scales affects emissions of criteria pollutants and greenhouse gases (GHGs), local and regional air quality. The results could inform decisions by stakeholders (e.g., industry, community, air quality planners, investors) regarding relationships and tradeoffs between multiple environmental impacts and the challenges and opportunities for the design and deployment of a sustainable biofuel supply chain.

09 BIOMASS FUELS↗

Biosatellite II mission.

Operational flight phase of Biosatellite 2 mission to obtain data concerning biological life processes in space and earth

Reynolds, O. E.↗

Information services for comparative analysis of biorhythm research

References and full text documents are presented in support of continuing research and research planning for the NASA behavioral physiology program. Areas covered include: (1) desynchronosis and performance; (2) effects of alcohol, common colds, drugs, and toxic hazards on performance; (3) effects of stress on rhythm of plasma steroids; (4) data processing of biological rhythms; (5) pharmacology and biological rhythms; (6) mechanisms of biological rhythms; and (7) development of biological rhythms.

Source record↗

Automatic instrument for chemical processing to detect microorganism in biological samples by measuring light reactions

An automated apparatus is reported for sequentially assaying urine samples for the presence of bacterial adenosine triphosphate (ATP) that comprises a rotary table which carries a plurality of sample containing vials and automatically dispenses fluid reagents into the vials preparatory to injecting a light producing luciferase-luciferin mixture into the samples. The device automatically measures the light produced in each urine sample by a bioluminescence reaction of the free bacterial adenosine triphosphate with the luciferase-luciferin mixture. The light measured is proportional to the concentration of bacterial adenosine triphosphate which, in turn, is proportional to the number of bacteria present in the respective urine sample.

Kelbaugh, B. N.↗

Summary of scientific results

Conceptual, instrumental, and operational aspects of the experiments package are outlined. A preliminary assessment is given on scientific results in astronomy, earth atmosphere, earth observations, biological materials processing, and solid materials processing.

Giuli, R. T.↗

A survey of the economics of materials processing in space

A survey of the economics of space materials processing has been performed with the objectives of identifying those areas of space materials processing that give preliminary indication of significant economic potential, and to identify possible approaches to quantify the economic potential. It is concluded that limited economic studies have been performed to date, primarily in the area of the processing of inorganic materials, but that the economics of space processing of biological material has not received adequate attention. Specific studies are recommended to evaluate the economic impact of human lymphocyte subgroup separation on organ transplantation, and on the separation and concentration of urokinase producing cells.

Miller, B. P.↗

Beneficial uses of space

The study elicited over 100 ideas for Space Processing. Of the elicited ideas, more than 20% involved processing of biologicals, or related medical and life sciences applications. Among these were High Purity Separation of Isoenzymes, and Development of Biorhythms applications data. Program planning for four products is outlined. Experimentation and testing resulted in definition of nearly 70 series of tests in ground-based laboratories, sounding rockets, etc., and space shuttle. Development schedules established timing and interrelationships of decisions involved in carrying these products to the point of production. The potential profitability of the four products is determined. Resources needed to achieve full scale production included use of shuttle for transportation, for which cost apportionment model was developed. R and D resources for the four products totalled $46,000,000 with Isoenzymes requiring the smallest expenditure, $4,000,000. A computerized profitability model (INVEST) was used to determine the measures of profitability of each product. Results build confidence that there will be a payoff.

Bloom, H. L.↗

Possible applications of space processing

Numerous applications take advantage of low gravity. These range from research, such as study of basic properties of materials or developing a better understanding of various processes and how they might be controlled, to actual production of unique materials, either in very limited quantities for research purposes to serve as paradigms for determining the limiting results of processes in which gravity effects are removed, or in large quantities, to fill certain high technology needs that cannot be met by other means. Examples of these are given in the following topics discussed: (1) crystal growth; (2) metals, alloys and composite materials (metallurgy); (3) glass and ceramics (containerless processing); (4) fluid and chemical processes; and (5) processing of biological materials.

Source record↗

Closed-ecology life support systems /CELSS/ for long-duration, manned missions

Studies were conducted to scope the principal areas of technology that can contribute to the development of closed-ecology life support systems (CELSS). Such systems may be required for future space activities, such as space stations, manufacturing facilities, or colonies. A major feature of CELSS is the regeneration of food from carbon in waste materials. Several processes, using biological and/or physico-chemical components, have been postulated for closing the recycle loop. At the present time, limits of available technical information preclude the specification of an optimum scheme. Nevertheless, the most significant technical requirements can be determined by way of an iterative procedure of formulating, evaluating and comparing various closed-system scenario. The functions features and applications of this systems engineering procedure are discussed.

Modell, M.↗

Summary results of the Industry Conference on the Commercial Use of Space

The future intentions of the Federal Republic of Germany in the area of the commercialization of space are presented. It is shown that significant advances in microgravity research, particulary in the areas of materials science, composite materials, physical chemistry, crystal growth, biology, and process engineering will have an effect on future plans for establishing sponsoring organizations to guide commercial interests in German space research. An organizational and functional outline of a proposed sponsoring organization to promote space commercialization under German supervision, including the objectives, the target group to be served, and the administrative structure, is presented. The role of the DFVLR (German Aerospace Research Establishment) and the BMFT (German Ministry for Research and Technology) as sponsoring organizations representing the interests of the German government is shown.

REUSE↗

Biomass recycle as a means to improve the energy efficiency of CELSS algal culture systems

Algal cultures can be very rapid and efficient means to generate biomass and regenerate the atmosphere for closed environmental life support systems. However, as in the case of most higher plants, a significant fraction of the biomass produced by most algae cannot be directly converted to a useful food product by standard food technology procedures. This waste biomass will serve as an energy drain on the overall system unless it can be efficiently recycled without a significant loss of its energy content. Experiments are reported in which cultures of the alga Scenedesmus obliquus were grown in the light and at the expense of an added carbon source, which either replaced or supplemented the actinic light. As part of these experiments, hydrolyzed waste biomass from these same algae were tested to determine whether the algae themselves could be made part of the biological recycling process. Results indicate that hydrolyzed algal (and plant) biomass can serve as carbon and energy sources for the growth of these algae, suggesting that the efficiency of the closed system could be significantly improved using this recycling process.

Radmer, R.↗

Constraints imposed by cosmic evolution towards the development of life

The probability of terrestrial-type life emerging in any other place of the universe will depend on the constraints imposed by cosmic evolution on that particular place. A systematic examination of cosmic constraints, which must have provided the necessary and sufficient conditions for the origin and evolution of life on earth, shows that they are concerned with the nature of the central star, the planetary system, and the specific life-bearing planet, as well as with the chemical and biological evolution processes involved. These constraints or universal requirements for life are briefly described.

Oro, J.↗

A survey of visual preprocessing and shape representation techniques

Many recent theories and methods proposed for visual preprocessing and shape representation are summarized. The survey brings together research from the fields of biology, psychology, computer science, electrical engineering, and most recently, neural networks. It was motivated by the need to preprocess images for a sparse distributed memory (SDM), but the techniques presented may also prove useful for applying other associative memories to visual pattern recognition. The material of this survey is divided into three sections: an overview of biological visual processing; methods of preprocessing (extracting parts of shape, texture, motion, and depth); and shape representation and recognition (form invariance, primitives and structural descriptions, and theories of attention).

Olshausen, Bruno A.↗