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NASA NTRS2021

A NICER View of the Massive Pulsar PSR J0740+6620 Informed by Radio Timing and XMM-Newton Spectroscopy

We report on Bayesian estimation of the radius, mass, and hot surface regions of the massive millisecond pulsar PSR J0740+6620, conditional on pulse-profile modeling of Neutron Star Interior Composition Explorer X-ray Timing Instrument event data. We condition on informative pulsar mass, distance, and orbital inclination priors derived from the joint North American Nanohertz Observatory for Gravitational Waves and Canadian Hydrogen Intensity Mapping Experiment/Pulsar wideband radio timing measurements of Fonseca et al. We use XMM-Newton European Photon Imaging Camera spectroscopic event data to inform our X-ray likelihood function. The prior support of the pulsar radius is truncated at 16 km to ensure coverage of current dense matter models. We assume conservative priors on instrument calibration uncertainty. We constrain the equatorial radius and mass of PSR J0740+6620 to be-+12.390.981.30km and-+2.0720.0660.067Me respectively, each reported as the posterior credible interval bounded by the 16% and 84% quantiles, conditional on surface hot regions that are non-overlapping spherical caps of fully ionized hydrogen atmosphere with uniform effective temperature; a posteriori, the temperature is=-+TlogK5.99100.060.05([])for each hot region. All software for the X-ray modeling framework is open-source and all data, model, and sample information is publicly available, including analysis notebooks and model modules in the Python language. Our marginal likelihood function of mass and equatorial radius is proportional to the marginal joint posterior density of those parameters(within the prior support)and can thus be computed from the posterior samples.

Millisecond pulsars↗
NASA NTRS2021

HAPI: An API Standard for Accessing Heliophysics Time Series Data

Heliophysics data analysis often involves combining diverse science measurements, many of them captured as time series. Although there are now only a few commonly used data file formats, the diversity in mechanisms for automated access to and aggregation of such data holdings can make analysis that requires intercomparison of data from multiple data providers difficult. The Heliophysics Application Programmer's Interface (HAPI) is a recently developed standard for accessing distributed time series data to increase interoperability. The HAPI specification is based on the common elements of existing data services, and it standardizes the two main parts of a data service: the request interface and the response data structures. The interface is based on the REpresentational State Transfer (REST) or RESTful architecture style, and the HAPI specification defines five required REST endpoints. Data are returned via a streaming format that hides file boundaries; the metadata is detailed enough for the content to be scientifically useful, e.g., plotted with appropriate axes layout, units, and labels. Multiple mature HAPI-related open-source projects offer server-side implementation tools and client-side libraries for reading HAPI data in multiple languages (IDL, Java, MATLAB, and Python). Multiple data providers in the US and Europe have added HAPI access alongside their existing interfaces. Based on this experience, data can be served via HAPI with little or no information loss compared to similar existing web interfaces. Finally, HAPI has been recommended as a COSPAR standard for time series data delivery.

Robert S. Weigel↗
NASA NTRSDate not supplied

COTS Camera and Computer-based Open-source Star Tracker

The NASA Johnson Space Center (JSC) and other partners have developed and verified a software suite intended to allow users with little-to-no experience with star trackers/attitude estimation to assemble, deploy, calibrate, and operate a star tracker using COTS cameras and computers. This software is open source, written in Python 3, and has been demonstrated across a variety of computers, operating systems, and cameras. The first release of the software is now available to download at the link below. We’re excited to see what you do with it! Please contact us for more information.

Samuel M. Pedrotty↗
NASA NTRSDate not supplied

What (and How) MERRA-2 Reanalysis Data are Used in Applied Sciences

The Modern Era Retrospective-analysis for Research and Applications, Version 2 (MERRA-2) is the global atmospheric data reanalysis for the satellite era produced by NASA’s Global Modeling and Assimilation Office (GMAO), using the Goddard Earth Observing System Model (GEOS)version 5.12.4. The data are officially distributed by the NASA Goddard Earth Sciences Data and Information Services Center (GES DISC). MERRA-2 data have been widely used by the Earth sciences and application community. Since MERRA-2 data were released in early 2016, the number of registered data users has grown steadily from 1,252 in 2016 to 6477 in 2020. By the end of October 2021, ~16 petabytes (over 360 million files) of data have been distributed to more than 18,900 users. Searching in Google Scholar (https://scholar.google.com/), we have found over 7,000 articles, published between January 2017 and May 2021, involving the use ofMERRA-2 data. The figure shows the numbers for various application areas in which theMERRA-2 data have been used, covering almost all of the application areas defined in NASA Applied Sciences (http://appliedsciences.nasa.gov). The largest number of articles are found in disaster research, with the subcategories ordered in flood, wildfires, hurricanes and cyclones, and other forms of severe weather. In this presentation, we will discuss the preliminary findings from a review of the selected literature that uses MERRA-2 data in applied sciences. The current analytic and interoperable data services at GES DISC are listed, such as the on-the-fly subset and analysis service, NASA Giovanni; THREDDS Data Server(TDS); and Python Jupyter notebooks. In addition, we will introduce two new services for supporting the open sciences: My Dashboard and Related Publications.

data management↗
NASA NTRSDate not supplied

Analyzing Optical Energy Behavior in Tropical Cyclones During Rapid Intensitication

Forecasting rapid intensification (RI) in tropical cyclones is an unpredictable task taken on by forecasters every year. Hurricane Laura made its way through the Gulf of Mexico in August 2020, undergoing RI on August 26, 2020 and strengthening from a category 1 hurricane to a category 4 hurricane in less than 18 hours. The goal of this project was to use data from the Geostationary Lightning Mapper (GLM) aboard the GOES-16 satellite to track lightning over the Western Hemisphere and investigate optical energy during this period of RI. Data was taken from the entire hurricane using a fixed area that captured Laura from 0000-2359 UTC on August 26 and using Python, the sum of the optical energy, average flash extent density (FED), and average flash area were investigated using time series plots to determine if there were any patterns before, during, and after RI. Variations at the beginning and end of RI point to a change in lightning behavior. Along with time series plots, investigating the distribution of values during RI may be a useful in determining if these parameters have any discernable pattern. Applying this methodology to a larger sample of tropical cyclones can provide a better understanding as to how these parameters vary during RI periods.

Kiahna Mollette↗
NASA NTRS2020

Automated Noise Calibration System (VT-1000)

This paper details an automated Noise Source calibration system in development at Jet Propulsion Laboratory, California Institute of Technology (JPL). The paper begins with a discussion on Noise Figure and Excess Noise Ratio (ENR) theory, fundamentals and governing equations. As part of the fundamentals is a discussion of the system’s use of the Y-factor method to obtain accurate measurements of the Unit Under Test (UUT), and how these measurements are compared against a known ENR standard to obtain the UUT’s ENR values. There is also an in-depth discussion on uncertainty quantification for Noise Source system calibrations. The architecture of the automated calibration system is provided, which includes both the system’s hardware and software configuration. The software is written in Python 3, and provides the user detailed instruction on how to proceed, including step-by-step connection requirements. This system automates much of the measurement process, including real-time uncertainty quantification and report generation, as well as real-time feedback to the user to allow intervention if necessary. The system takes advantage of a database of results from previous measurements to compare calibration history of the ENR measurements. The automated system presented here operates over a frequency range from 10 MHz to 50 GHz, and has shown substantial time savings over traditional manual methods of performing this calibration.

Timpe, Scott↗
NASA NTRS2020

ICESat-2 Tracking App for Public Engagement

Information regarding the predicted ground tracks of Earth observing satellites is typically difficult to find and understand for the general public. This paper will describe and demonstrate an iOS mobile application for tracking NASA’s ICESat-2 (Ice, Cloud, and land Elevation Satellite 2), making it easier for users to see exactly when the satellite will be passing over any location in the world. ICESat-2, launched in 2018, uses green lasers to track elevation changes in polar ice and indirectly measure trees, land, and water, providing a precise height map of our planet. Most satellite tracking mobile apps display information about where a specific satellite is at that given moment and when it will be passing over the user’s location in the near future. ICESat-2 the app differs by allowing users to search for data about the satellite’s future flybys relative to a specific search location and radius that they get to choose. The search results include points up to three months into the future. By supplying user-centric results, users are provided relevant data in an easy-to- access manner. Additionally, this data is very clear to visualize in-app through maps, pins, and ground track lines. This becomes an incredibly useful tool not only to plan an observation of the satellite as it passes, but also for knowing when elevation data for a specific area will be available. In addition, this flyby information helps students and citizen scientists take more valuable tree height measurements to better validate the elevation data collected by the satellite. To achieve this outreach product, three key components were developed. These include a Python script to simplify the raw ground track data, a Node.js server that actively takes requests, and the iOS app itself. From initial beta tests, it has been noted that providing users with a map for visual awareness of search radius and result coordinates gives them a more comprehensive understanding of the data. Overall, by cleaning the raw data and making it available in a much more accessible and easier to understand way, ICESat-2 the app has exceeded expectations in providing educational and exciting data for all.

Harbeck, Kaitlin↗
NASA NTRS2022

The Earth Model Column Collaboratory (EMC2) v1.1: An Open-Source Ground-Based Lidar and Radar Instrument Simulator and Subcolumn Generator for Large-Scale Models

Climate models are essential for our comprehensive understanding of Earth's atmosphere and can provide critical insights on future changes decades ahead. Because of these critical roles, today's climate models are continuously being developed and evaluated using constraining observations and measurements obtained by satellites, airborne, and ground-based instruments. Instrument simulators can provide a bridge between the measured or retrieved quantities and their sampling in models and field observations while considering instrument sensitivity limitations. Here we present the Earth Model Column Collaboratory (EMC2), an open-source ground-based lidar and radar instrument simulator and subcolumn generator, specifically designed for large-scale models, in particular climate models, but also applicable to high-resolution model output. EMC2 provides a flexible framework enabling direct comparison of model output with ground-based observations, including generation of subcolumns that may statistically represent finer model spatial resolutions. In addition, EMC2 emulates ground-based (and air- or space-borne) measurements while remaining faithful to large-scale models' physical assumptions implemented in their cloud or radiation schemes. The simulator uses either single particle or bulk particle size distribution lookup tables, depending on the selected scheme approach, to perform the forward calculations. To facilitate model evaluation, EMC2 also includes three hydrometeor classification methods, namely, radar- and sounding-based cloud and precipitation detection and classification, lidar-based phase classification, and a Cloud Feedback Model Intercomparison Project Observational Simulator Package (COSP) lidar simulator emulator. The software is written in Python, is easy to use, and can be straightforwardly customized for different models, radars, and lidars. Following the description of the logic, functionality, features, and software structure of EMC2, we present a case study of highly supercooled mixed-phase cloud based on measurements from the U.S. Department of Energy Atmospheric Radiation Measurement (ARM) West Antarctic Radiation Experiment (AWARE). We compare observations with the application of EMC2 to outputs from four configurations of the NASA Goddard Institute for Space Studies (GISS) climate model (ModelE3) in single-column model (SCM) mode and from a large-eddy simulation (LES) model. We show that two of the four ModelE3 configurations can form and maintain highly supercooled precipitating cloud for several hours, consistent with observations and LES. While our focus is on one of these ModelE3 configurations, which performed slightly better in this case study, both of these configurations and the LES results post-processed with EMC2 generally provide reasonable agreement with observed lidar and radar variables. As briefly demonstrated here, EMC2 can provide a lightweight and flexible framework for comparing the results of both large-scale and high-resolution models directly with observations, with relatively little overhead and multiple options for achieving consistency with model microphysical or radiation scheme physics.

Earth Model Column Collaboratory↗
NASA NTRS2022

MLtool: Universal Supervised Machine Learning Tool to Model Tabulated Data

Machine Learning (ML) is a subfield of Artificial Intelligence that gives computers the ability to learn from past data without being explicitly programmed. The predictive capabilities of ML models have already been used to facilitate several scientific breakthroughs. However, the practical application of ML is often limited due to the gaps in technical knowledge of its users. The common issue faced by many scientific researchers is the inability to choose the appropriate ML pipelines that are needed to treat real-world data, which is often sparse and noisy. To solve this problem, we have developed an automated Machine Learning tool (MLtool) that includes a set of ML algorithms and approaches to aid scientific researchers. The current version of MLtool is implemented as an object-oriented Python code that is easily extensible. It includes 44 different regression algorithms used to model data. MLtool helps users select the best model for their data, based on the scoring metrics used. Besides regression algorithms, MLtool also includes a suite of pre- and post-processing techniques such as missing value imputation, categorical variable encoding, input feature normalization, uncertainty quantification, exploratory data analysis (EDA), etc. MLtool was tested on several publicly available multi-dimensional data sets and was found capable of making accurate predictions.

Machine learning↗
NASA NTRS2021

A Practical Guide to Writing a Radiative Transfer Code

Using our decades-long experience in radiative transfer (RT) code development for Earth science, we endeavor to reduce the knowledge gap of bringing RT from theory to code quickly. Despite numerous classic and recent literature, it is still hard to develop anRT code from scratch within a few weeks. It is equally hard to understand, not to mention modify, an existing “monster” RT code, for which the developer is either located remotely or has retired. Following the format of “Numerical Recipes” by Press et al., we collocate in this paper small pieces of necessary theory with corresponding small pieces of RT code. These are arranged in an order that is natural for code development, which is often opposite of the natural order for laying out the theoretical basis. We focus on the transfer of unpolarized monochromatic solar radiation in a plane-parallel atmosphere over a reflecting surface. Both the surface and the atmosphere are homogeneous (uniform) at all directions. The multiple scattering is numerically solved using the deterministic method of Gauss-Seidel iterations. Except for the presented Python-Numba open-source RT code gsit, the paper does not report any new scientific results, but rather serves as an academic demonstration. If development time is an issue or the reader is familiar with basic concepts of RT theory, we recommend proceeding directly to Sec.3 “RT code development.

multiple light scattering↗
NASA NTRSDate not supplied

Introducing Tropical Geometric Approaches to Delay Tolerant Networking Optimization

Delay Tolerant Networking (DTN) is the standard approach to the networking of space systems with the goal of supporting the Solar System Internet (SSI). Current space networks have a small scale and often depend on rigorously scheduled (pre-determined) contact opportunities; this manual approach inhibits scalability. The goal of this paper is to recast these scheduling problems in order to apply the optimization machinery of tropical geometry. Contact opportunities in space are dependent on such factors as orbital mechanics and asset availability, which induce time-varying connectivity; indeed, end-to-end connectivity might never occur. Routing optimization within this structure is classically difficult and typically utilizes Dijkstra's algorithm as applied to contact graphs. Alternatively, we follow the successes of tropical geometry in train schedule optimization, job assignments, and even traditional networking, by extending this approach to this more general (i.e. disconnected) problem space. These successes imply tropical geometry provides a useful framework in the context of DTNs, starting with applications to queuing theory and long-haul links. Recently, tropical geometry has been applied to parametric path optimization on graphs with variable edge weights. In this work, we extend these advances to account for the problem of routing in a space network, and find that tropical geometry is well-suited to the challenges offered by this new setting, including contact schedules featuring probabilities. Our approach leverages the combinatorial nature of the problem to give feasible shortest path trees in the presence of variable channel conditions and latency, evolving topologies, and uncertainty inherent in space routing. We discuss our tropical approach to DTN for two Python implementations, a Verilog Tropical ALU implementation, tropical frameworks for other parametric graph problems, and solution stability. Lastly, a program for future work is included to illuminate the path ahead.

Delay Tolerant Networking↗
NASA NTRS2022

VESIcal: An Open-source Thermodynamic Model Engine for Mixed Volatile (H2O-CO2) Solubility in Silicate Melts

Modeling the solubility of volatiles in silicate melts is fundamental to the interpretation of volcanic systems and has implications for magma dynamics, eruption style, and material transport between the mantle, crust, and atmosphere. Recent advancements in computational capabilities and access to computing tools has outpaced the functionality and extensibility of previously available modeling platforms. Here we present VESIcal (Volatile Equilibria and Saturation Index calculator), the first comprehensive modeling tool for H2O, CO2, and mixed (H2O-CO2) solubility in silicate melts that: a) allows users access to seven popular models, with easy inter-comparison between models; b) provides universal functionality for all models (e.g., functions for calculating saturation pressures, degassing paths, etc.); c) can process large datasets (1,000’s of samples) automatically; d) can output computed data into an Excel spreadsheet or CSV file for post-modeling analysis; e) integrates plotting capabilities directly within the tool; and f) provides all of this within the framework of a python library, making the tool extensible by the user and allowing any of the model functions to be incorporated into any other code capable of calling python.Here we will provide a demonstration of VESIcal and its capabilities with applications to various volcanic processes affected by volatiles. VESIcal represents the first tool capable of directly comparing multiple solubility models and equations of state. We find that commonly used models predict surprisingly different volatile solubilities, particularly for pure CO2 or mixed CO2-H2O fluids. Even for melt compositions that are well represented in the calibration datasets of multiple models (e.g., MORBs), calculated solubilities for pure CO2 and pure H2O can deviate from one another by factors of >2 leading to 2x deviations in calculated saturation pressures (e.g., 5 to 10 kbar). The solubility of CO2 predicted by different rhyolitic models also differs substantially, overwhelming other sources of uncertainty such as analytical errors on measurements of volatile contents or uncertainties in crustal density profiles. This highlights the importance of model choice when drawing geological conclusions based on volatiles in magmas.

Kayla Iacovino↗
NASA NTRS2021

A High Dynamic-Range Photon-Counting Receiver for Deep Space Optical Communication

The Deep Space Optical Communication (DSOC) project will demonstrate free-space optical communication at almost 3 AU, or 3 orders of magnitude further than any previous attempt. DSOC will utilize the 5m Palomar Hale Telescope to receive the downlink signal, which will couple the downlink light onto an optical table and into a superconducting nanowire single photon detector (SNSPD). The output of the SNSPD is digitized by the Ground Laser Receiver Signal Processing Assembly (GSPA) using a high throughput streaming time to digital converter (TDC). The GSPA is a scalable FPGA-based receiver which demodulates and decodes the DSOC downlink signal through novel signal processing algorithms implemented on Xilinx UltraScale+ FPGAs, as well as Python-based software monitor and control routines. Exploiting the unique TDC-based architecture, the GSPA supports over four orders of magnitude of downlink data rates across multiple orders of magnitude of signal and background powers. In this paper we present an overview of the hardware, firmware and software architectures to implement this system, as well as performance analysis for links ranging from near-Earth to 2.8 AU.

Srinivasan, Meera↗
NASA NTRSDate not supplied

Bingo: A Customizable Framework for Symbolic Regression with Genetic Programming

In this paper, we introduce Bingo, a flexible and customizable yet performant Python framework for symbolic regression with genetic programming. Bingo maintains a modular code structure for simple abstraction and easily swappable components. Fitness functions, selection methods, and constant optimization methods allow for easy problem-specific customization. Bingo also maintains several features for increased efficiency such as parallelism, equation simplification, and a C++ backend. We compare Bingo’s performance to other genetic programming for symbolic regression (GPSR) methods to show that it is both competitive and flexible.

machine learning↗
NASA NTRSDate not supplied

Constructing a Knowledge Graph & Applying Graph Algorithms to Draw Insights about GES-DISC Jira Tickets

In order to assess the complexities of Jira tickets created by NASA Goddard Earth Sciences Data and Information Services Center (GES-DISC), it was beneficial to create a knowledge graph. The knowledge graph receives ticket data through the Jira API. The creation of a knowledge graph will help to answer high-level questions about internal structure, knowledge gaps, and team organization within GES-DISC. To work towards this goal, the knowledge graph was constructed in adockerizedNeo4j graph database. Once the graph had been created, graph algorithms were applied to answer high-level questions, such as exploring the role of staff in relation to projects, which qualities of a ticket contribute to the formation of communities within the graph, etc. To answer these questions, centrality and community detection algorithms were applied using Cypher querying language. The analysis of the results of the algorithms indicated that, as expected, certain individuals were more connected to some projects, while others were serving as hub nodes between two or more projects. Similarly, specific keywords are more likely to increase a Jira ticket’s centrality in the graph. In terms of community detection, when tickets in a community have certain qualities, it is more probable for them to be grouped together. To best visualize which nodes had higher centrality scores or were grouped into certain communities, interactive graphs were created in Python using Plotly and Matplotlib. Ultimately, the project was successful in creating and deploying a knowledge graph to better understand the relationships between data in GES-DISC Jira tickets

Rebecca Lipton↗
NASA NTRSDate not supplied

Enabling in-time Prognostics with Surrogate Modeling through Physics-enhanced Dynamic Mode Decomposition Method

Computational models provide essential quantitative tools for assessing and predicting the health and performance of physical systems. However, high-fidelity models are rarely used in real-time operations or large optimization loops, due to their time-intensive nature. A common approach to improving computational efficiency of prognosis is to employ surrogate models. Such models can significantly decrease computation time for some accuracy loss. In this context, use of Dynamic Mode Decomposition (DMD) is proposed to generate surrogate models for lithium-ion (Li-ion) battery discharge. DMD has been suggested and used successfully in the area of fluid dynamics for over a decade, but it has not been applied to the PHM domain, where far-ahead prediction of nonlinear behavior is crucial to propagate faults or predict Remaining Useful Life (RUL). For Li-ion battery health management, the standard application of DMD using only the observable quantities of interest was unable to capture the nonlinear discharge of batteries exhibited in lab testing. The Koopman theory, however, provides a mechanism to tradeoff low dimensional nonlinear models with high-dimensional linear ones in a DMD framework, by augmenting nonlinear state variables into the system representation. In this way, DMD allows for configurable simulation accuracy dependent on the dimensionality of the Koopman operator. For battery health management, we augmented the observable variables with the hidden states of a higher-fidelity physics model to build the DMD surrogate. In comparison to a high-fidelity model, the surrogate improved computational efficiency with only a minimal loss of accuracy, and enabled long-term prognostics horizons. A generalized method for this was implemented in the prog models python package.

prognostics and health management↗
NASA NTRSDate not supplied

Progress on Inverse Estimation Technique of Non-Linear Pitch Damping Coefficient Curves Using Free-Flight CFD Generated Trajectories

Characterization of entry vehicle pitch damping coefficient curves is crucial to ensure appropriate re-entry and overall mission success. The pitch damping coefficient (C_(m_q )+C_(m_α ̇ )) is used to encapsulate the oscillatory growth or decay of a body during a trajectory. The inverse estimation technique utilizes an existing Free-Flight CFD (FF-CFD) dataset and wraps a reconstruction algorithm in an optimizer. The reconstruction integrates the planar equations of motion derived by Schoenenberger, Queen [1] using Python’s scipy.integrate.solve_ivp. The optimizer’s objective function is the normalized 𝐿2 residual of the angle of attack peaks between the reconstructed trajectory and the original data produced with FF-CFD. Inclusion of the peak times in this residual calculation allows for simultaneous optimization of the pitch moment coefficient, C_(m_α ). This residual equation is shown below in Eq. 1. The optimizer scipy.optimize.minimize was used with the gradient-based Powell method for the analysis presented, however the differential evolution method was investigated as means of comparison, and was found to produce marginally lower residual values with prohibitively longer run times. Further, the pitch damping curve is found by fitting a cubic interpolation function to a set of (α, (C_(m_q )+C_(m_α ̇ ))) control points, where the α points are held constant and the (C_(m_q )+C_(m_α ̇ )) values are the optimized parameters. The pitch moment curve uses a linear interpolation between the minimum and maximum α in the dataset. FF-CFD generated trajectories using the Dragonfly capsule geometry with the Genesis ballistic range model parameters were simulated and used for this analysis. These FF-CFD trajectories simulate planar motion, as restricted by the reconstructing the equations of motion, of three different cases: 1-DoF (free-to-pitch), 2-DoF (free-to-pitch and heave), and 3-DoF (free-to-pitch, heave, and decelerate). Pitch damping coefficient curves generated using this inverse estimation curve technique with FF-CFD 1-DoF Dragonfly data are found in Fig. 1. Preliminary results reconstructing ballistic range shots using these FF-CFD derived predictions of the pitch damping curve (Fig. 1) are shown in Fig. 2. It should be noted that the ballistic range shot used a Genesis model whereas the FF-CFD data used a Dragonfly geometry, however these geometries are similar.

entry↗
NASA NTRSDate not supplied

Bingo: A Customizable Framework for Symbolic Regression with Genetic Programming

In this paper, we introduce Bingo, a flexible and customizable yet performant Python framework for symbolic regression with genetic programming. Bingo maintains a modular code structure for simple abstraction and easily swappable components. Fitness functions, selection methods, and constant optimization methods allow for easy problem-specific customization. Bingo also maintains several features for increased efficiency such as parallelism, equation simplification, and a C++ backend. We compare Bingo’s performance to other genetic programming for symbolic regression (GPSR) methods to show that it is both competitive and flexible.

David Randall↗