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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Electromagnetic wave absorption of multifunctional cementitious composites incorporating polyvinyl alcohol (PVA) fibers and fly ash: Effects of microstructure and hydration

Highlights: • The cementitious composite shows excellent wide-band electromagnetic wave absorption in a frequency range of 2–18 GHz. • The PVA fibers and the fly ash change the dielectric properties of the cementitious composite by Debye polarization. • The iron oxide of the cementitious binders contributes to the magnetic properties of the composites. • The impacts of the microstructure and the hydration of the cementitious composite on its microwave absorption are analyzed. This paper devises a novel method for the adjustment of the pore structure and the hydration of cement to improve the electromagnetic wave absorption of the cementitious composites incorporating polyvinyl alcohol (PVA) fibers and fly ash in a frequency range of 2–18 GHz. The underlying mechanism of the absorption is investigated to explore the possibility of the structural and functional integration of these composites. The electromagnetic parameters of the prepared cementitious composites and those of the raw materials are analyzed in a frequency range of 0.5–18 GHz. Moreover, the pore structure and the chemical environment of the cementitious composites are examined by mercury intrusion porosimetry (MIP), back-scattered electron detector (BSE), and X-ray photoelectron spectroscopy (XPS). The results indicate that the PVA fibers and the high-volume fly ash have a positive effect on electromagnetic wave absorption of the cementitious composites through the adjustment of their pore structure and hydration.

36 MATERIALS SCIENCE↗
DOE OSTI2017

Developing a GUM Compliant Uncertainty Approach for NDA Gamma Analysis Using FRAM

The Fixed-Energy Response-Function Analysis with Multiple Efficiency (FRAM) code was developed at Los Alamos National Laboratory (LANL) to analyze gamma-ray spectra for the isotopic composition of plutonium or uranium. This software provides means to easily process gamma-ray spectra to obtain isotopic information and is used globally for international safeguards applications. In a recent review of the FRAM code for the use in nuclear forensics applications, it was determined that a more complete understanding and definition of the various sources of uncertainty that contribute to the overall uncertainty of the FRAM measurement process is required. As one of the ISO 17025 accredited Bulk Special Nuclear Materials Analysis Program (BSAP) laboratories, LANL is required to perform an accurate and transparent uncertainty calculation on every analysis it performs. This paper describes a new approach to calculate a Guide to the Expression of Uncertainty in Measurement (GUM) compliant FRAM uncertainty to support nuclear forensics applications.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗
DOE OSTI2018

Gradient-based optimization for regression in the functional tensor-train format

Predictive analysis of complex computational models, such as uncertainty quantification (UQ), must often rely on using an existing database of simulation runs. In this paper we consider the task of performing low-multilinear-rank regression on such a database. Specifically we develop and analyze an efficient gradient computation that enables gradient-based optimization procedures, including stochastic gradient descent and quasi-Newton methods, for learning the parameters of a functional tensor-train (FT). We compare our algorithms with 22 other nonparametric and parametric regression methods on 10 real-world data sets and show that for many physical systems, exploiting low-rank structure facilitates efficient construction of surrogate models. Here, we use a number of synthetic functions to build insight into behavior of our algorithms, including the rank adaptation and group-sparsity regularization procedures that we developed to reduce overfitting. Finally we conclude the paper by building a surrogate of a physical model of a propulsion plant on a naval vessel.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2022

Kinetic theory of particle-in-cell simulation plasma and the ensemble averaging technique

Abstract We derive the kinetic theory of fluctuations in physically and numerically stable particle-in-cell (PIC) simulations of electrostatic plasmas. The starting point is the single-time correlation at the start of the simulation between the statistical fluctuations of the weighted densities of macroparticle centers in the plasma particle phase-space. The fluctuations are associated with different initial conditions, typically due to the random initial conditions (in velocity space) of the macroparticles/simulation plasma, assigned according to their initial distribution of probability. The single-time correlations at all time steps and in each spatial grid cell are then determined from the Laplace–Fourier transforms of the discretized Klimontovich-like equation for the macroparticles and Maxwell’s equations for the fields, as computed by modern PIC codes. We recover the expressions for the electrostatic field and the plasma particle density fluctuation autocorrelation spectra as well as the kinetic equations describing the average evolution of PIC-simulated plasma particles, first derived by Langdon (1970b Proc. 4th Conf. Numerical Simulation of Plasmas ) using a test macroparticle approach perturbing a discretized Vlasovian plasma and then averaging the obtained physical quantity over the initial macroparticle velocity distribution. We generalize and extend these results to the modern algorithms in PIC codes using arbitrary macroparticle weights. Analytical estimates of statistical fluctuation amplitudes are derived as a function of the plasma simulation parameters, using the central limit theorem in the limit of a large number of macroparticles per cell. The theory is then used to analyze the ensemble averaging technique of PIC simulations where statistical averages are performed over ensembles of PIC simulations, modeling the same plasma physics problem but using different statistical realizations of the initial distribution functions of the macroparticles. This method is illustrated by linear Landau damping uncovering (from noise, which is usually considered numerical) the physical fluctuations driven by a single small amplitude electrostatic wave perturbing a PIC simulation plasma in equilibrium.

fluctuations correlations↗
DOE OSTI2017

Tensor Minkowski Functionals: first application to the CMB

Tensor Minkowski Functionals (TMFs) are tensor generalizations of the usual Minkowski Functionals which are scalar quantities. We introduce them here for use in cosmological analysis, in particular to analyze the Cosmic Microwave Background (CMB) radiation. They encapsulate information about the shapes of structures and the orientation of distributions of structures. We focus on one of the TMFs, namely W {sub 2}{sup 1,1}, which is the (1,1) rank tensor generalization of the genus. The ratio of the eigenvalues of the average of W {sub 2}{sup 1,1} over all structures, α, encodes the net orientation of the structures; and the average of the ratios of the eigenvalues of W {sub 2}{sup 1,1} for each structure, β, encodes the net intrinsic anisotropy of the structures. We have developed a code that computes W {sub 2}{sup 1,1}, and from it α and β, for a set of structures on the 2-dimensional Euclidean plane. We use it to compute α and β as functions of chosen threshold levels for simulated Gaussian and isotropic CMB temperature and E mode fields. We obtain the value of α to be one for both temperature and E mode, which means that we recover the statistical isotropy of density fluctuations that we input in the simulations. We find that the standard ΛCDM model predicts a charateristic shape of β for temperature and E mode as a function of the threshold, and the average over thresholds is β∼ 0.62 for temperature and β∼ 0.63 for E mode. Accurate measurements of α and β can be used to test the standard model of cosmology and to search for deviations from it. For this purpose we compute α and β for temperature and E mode data of various data sets from PLANCK mission. We compare the values measured from observed data with those obtained from simulations to which instrument beam and noise characteristics of the 44GHz frequency channel have been added (which are provided as part of the PLANCK data release). We find very good agreement of β and α between all PLANCK temperature data sets with ΛCDM expectations. E mode data show good agreement for β but α for all data sets deviate from ΛCDM predictions higher than 3−σ. It is most likely that the deviations are probing the anisotropy of the noise field and beam characteristics of the detector rather than the true E mode signal since for 44GHz the signal-to-noise ratio is well below one. This will be further investigated after the full PLANCK data becomes publicly available.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2019

Modeling of the Flows of Admixtures in a Random Layered Strip with Probable Arrangement of Inclusions Near the Boundaries of the Body

We study the random flow of admixtures in a two-phase stochastically inhomogeneous strip with the most probable arrangement of inclusions in the vicinity of the surfaces of the body. A mathematical model is formulated for the function of diffusion flow with nonzero constant initial concentration. A random diffusion flow is represented in the form of a Neumann series. The procedure of averaging of the random mass flow over the ensemble of phase configurations with arcsine distribution function is performed. The influence of the characteristics of the medium on the distribution of mass flow is analyzed. It is shown that if the diffusion coefficient of admixtures in the inclusion is higher than for the matrix, then the increase in the characteristic thickness of the layers causes a decrease in the value of the diffusion flow, whereas the mass flow in the entire body increases with the volume fraction of the inclusions.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2017

Charge transfer properties of diphenyl substituted cyclopentadithiophene organic semiconductors: The role of fluorine and malononitrile substitutions and crystal ordering

The geometry and electronic structures of four cyclopentadithiophene (CPD) derivatives in their crystals are systematically studied through density functional theory (DFT) calculations. The factors influencing the CPDs' semiconductor nature and charge carrier mobility are analyzed in detail, revealing the different roles of fluorine and dicyanomethylene in the CPDs examined in this study. Malononitrile substitutions show a large effect in lowering the molecular LUMO energy level but induce a smaller charge transfer integral due to the resulting reduced crystal order caused by the resulting steric hindrance. In comparison, although F substitution lowers the LUMO level more weakly than C(CN) 2 substitution, it allows the molecule to retain a more planar configuration with more orbital delocalization, and the crystals of the F substituted compounds are more ordered than those of the C(CN) 2 substituted compounds. Overall, this comparison can explain why F substitution is a more effective method to cause a transition of a p-type semiconductor to n-type. Crystal ordering plays a significant role in determining the charge transfer mobility in devices. In spite of the advantage offered by dicyanomethylene substitution in terms of charge injection barrier compared to fluorine substitution, the reduced crystal order caused by C(CN) 2 limits the charge transfer in CPDs with C(CN) 2 substitution. The validity of these findings can be generalized, which is expected to contribute to the rational design of n-type semiconductors based on CPDs.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2019

Regarding Nonstationary Quadratic Quantum Systems

With the help of the evolution operator method, we have established unitary connection between quadratic systems, namely between a free particle with variable mass M(t) , a particle with variable mass M(t) in a variable homogeneous field, and a harmonic oscillator with variable mass M(t) and frequency ω(t) , on which a variable force F(t) acts. Knowledge of the unitary connection allowed us to express easily in general form the propagators, invariants, wave functions, and other functions of a linear potential and a harmonic oscillator in terms of the corresponding quantities for a free particle. We have analyzed the linear and quadratic invariants in detail. Results known in the literature follow as particular cases from the general results obtained here.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2016

Technical Note: Statistical dependences between channels in radiochromic film readings. Implications in multichannel dosimetry

Purpose: This note studies the statistical relationships between color channels in radiochromic film readings with flatbed scanners. The same relationships are studied for noise. Finally, their implications for multichannel film dosimetry are discussed. Methods: Radiochromic films exposed to wedged fields of 6 MV energy were read in a flatbed scanner. The joint histograms of pairs of color channels were used to obtain the joint and conditional probability density functions between channels. Then, the conditional expectations and variances of one channel given another channel were obtained. Noise was extracted from film readings by means of a multiresolution analysis. Two different dose ranges were analyzed, the first one ranging from 112 to 473 cGy and the second one from 52 to 1290 cGy. Results: For the smallest dose range, the conditional expectations of one channel given another channel can be approximated by linear functions, while the conditional variances are fairly constant. The slopes of the linear relationships between channels can be used to simplify the expression that estimates the dose by means of the multichannel method. The slopes of the linear relationships between each channel and the red one can also be interpreted as weights in the final contribution to dose estimation. However, for the largest dose range, the conditional expectations of one channel given another channel are no longer linear functions. Finally, noises in different channels were found to correlate weakly. Conclusions: Signals present in different channels of radiochromic film readings show a strong statistical dependence. By contrast, noise correlates weakly between channels. For the smallest dose range analyzed, the linear behavior between the conditional expectation of one channel given another channel can be used to simplify calculations in multichannel film dosimetry.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Structural features of xylan dictate reactivity and functionalization potential for bio-based materials

Plant-based materials have the potential to replace some petroleum-based products, offering compostability and biodegradability as critical advantages. Xylan-rich biomass sources are gaining recognition due to their abundance and underutilization in current industrial applications. Research of potential xylan applications has been complicated by the complex and heterogeneous structure that varies for different xylan feedstocks. Acylation is a broadly used reaction in functionalization of polysaccharides at an industrial scale. However, the efficiency of this reaction varies with the xylan source. To optimize xylan valorization, a systematic understanding of structure–reactivity relationships is essential. This study explores, characterizes, and compares various xylan feedstocks in the acylation process. Xylan feedstocks were analyzed for their chemical composition, degree of polymerization, branching, solubility, and presence of impurities. These features were correlated with xylan glycotypes’ reactivity toward functionalization with succinic anhydride in an optimized DMSO/KOH condition, achieving carboxyl contents of up to 1.46. We used principal component analysis and hierarchical clustering to identify key structural features of xylan that promote its reactivity. Our findings reveal that xylans with higher xylose content and lower degrees of branching exhibit enhanced reactivity, achieving higher carboxyl content and yields. Structural analyses confirmed successful modification, and light scattering analyses showed dramatic changes in the solution properties. Succinylation improves the solubility and film-forming properties of native xylans. This study shows key structure–reactivity relationships in xylan succinylation, establishing that low branching, high xylose content, and reduced lignin impurity enhance chemical functionalization. The results offer a framework for selecting optimal biomass feedstocks and support future efforts in genetic and synthetic biology to design plants with tunable xylan architectures. These findings advance the hemicellulose valorization for applications in coatings and packaging.

Acylation↗
DOE OSTI2022

Quantitative assessment of particle dispersion in polymeric composites and its effect on mechanical properties

In this work, an automated image analysis tool is developed to establish quantitative correlations between the particle/cluster size distribution and the mechanical properties of particle reinforced polymer composites (PRPC).This automated image analysis tool is developed within python programming software to process and analyze the microstructural images of the polymerbased composite materials. The spent coffee bean powder (SCBP) reinforced poly-propylene carbonate (PPC) polymer composite with differing wt.% of the filler is selected for the analysis. Detailed statistical analysis of the microstructural images reveals that ‘clustering of clusters’ is also presented in addition to the most commonly reported ‘clustering of particles’, and the distribution of particle/clusters is bimodal. Based on these findings, an effective volume fraction for the filler material is proposed to mainly capture the agglomeration effect. With this effective volume fraction, the standard rule-of-mixture model correctly captures the experimentally measured tensile strength and modulus as a function of filler wt.%. Further, the applicability of this effective volume fraction for other theoretical models is also analyzed. The detailed statistical analysis of the microstructure and the proposed effective volume fraction helps to develop a deeper quantitative understanding of the PRPC than the conventional qualitative correlation of microstructural features with the properties and failure processes.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Coal Fired Power Plant Configuration and Operation Impact on Plant Effluent Contaminants and Conditions

The primary objective of this project is to characterize coal contaminants in coal-fired power plant wastewater as a function of coal type, unit configurations, and unit operation profile with uncertainty analysis. This project was in response to the U.S. Department of Energy (DOE) Solicitation DE-FOA-0001842. The project duration was between September 01, 2018, and December 31, 2021 (no-cost extension filed, due to the Covid-19 pandemic restrictions, and approved). Field and lab test program was conducted with the main goal to characterize coal contaminants in coal-fired power plant wastewater as a function of coal type, unit configurations, and unit operation profile with uncertainty analysis. In this project, the team of Lehigh University (prime recipient) and Western Kentucky University identified two suitable Thermoelectric Power Plants (TTPs) firing bituminous and sub-bituminous coals respectively, designed test plans, and performed sample collection. Sampling included coal from each TTPs power generation units, Wet Flue Gas Desulfurization (WFGD) slurry material and waste-water samples taken from the outlet of the water treatment tank prior to discharge and other pertinent locations. Coal samples are dried, crushed, and pulverized according to the American Society for Testing and Materials (ASTM) methods. The prepared coal samples are analyzed for normal proximate and ultimate analysis tests in addition to the toxic metals and anions according to ASTM methods. The FGD slurry materials are analyzed for toxic metals and anions according to Electric Power Research Institute (EPRI) or Environmental Protection Agency (EPA) methods, as appropriate. The wastewater samples from the water treatment tank outlet are analyzed for toxic metals and anions according to EPA methods. The effluent species analyzed include mercury, arsenic, selenium, nitrate/nitrite, bromide, and chlorine. This project provided results of effluent conditions as a function of coal type, unit configuration, and unit operation profile, and identified the levels of uncertainty in the effluent results.

01 COAL, LIGNITE, AND PEAT↗
DOE OSTI2022

Metatranscriptomics reveals a shift in microbial community composition and function during summer months in a coastal marine environment

Abstract Temperate coastal marine waters are often thermally stratified from spring through fall but can be dynamic and disrupted by tidal currents and wind‐driven upwelling. These mixing events introduce deeper, cooler water with a higher partial pressure of CO 2 (pCO2) and its associated microbial communities to the surface. Anecdotally, these events impact shellfish hatcheries and farms, warranting improved understanding of changes in composition and activity of marine microbial communities in relation to environmental processes. To characterize both compositional and functional changes associated with abiotic factors, here, we generate a reference metatranscriptome from the Strait of Georgia over representative seasons and analyze metatranscriptomic profiles of the microorganisms present within intake water containing different pCO 2 levels at a shellfish hatchery in British Columbia from June through October. Abiotic factors studied include pH, temperature, alkalinity, aragonite, calcite, and pCO 2 . Community composition changes were observed to occur at broad taxonomic levels and most notably to vary with temperature and pCO 2 . Functional gene expression profiles indicated a strong difference between early (June–July) and late summer (August–October) associated with viral activity. The taxonomic data suggest this could be due to the termination of cyanobacteria and phytoplankton blooms by viral lysis in the late season. Functional analysis indicated fewer differentially expressed transcripts associated with abiotic variables (e.g., pCO 2 ) than with the temporal effect. Microbial composition and activity in these waters vary with both short‐term effects observed alongside abiotic variation and long‐term effects observed across seasons. The analysis of both taxonomy and functional gene expression simultaneously in the same samples by environmental RNA (eRNA metatranscriptomics) provided a more comprehensive view for monitoring water bodies than either would in isolation.

Sutherland, Ben J. G.↗
DOE OSTI2017

Functional characterization of archaeal homologs of human nuclear RNase P proteins Rpp21 and Rpp29 provides insights into the molecular basis of their cooperativity in catalysis

Ribonuclease P (RNase P) is a ribonucleoprotein that catalyzes the processing of 5′ leader sequences of precursor tRNAs (pre-tRNA). RNase P proteins PhoRpp21 and PhoRpp29 in the hyperthermophilic archaeon Pyrococcus horikoshii, homologs of human nuclear RNase P proteins Rpp21 and Rpp29 respectively, fold into a heterodimeric structure and synergistically function in the activation of the specificity domain (S-domain) in RNase P RNA (PhopRNA). To elucidate the molecular basis for their cooperativity, we first analyzed binding ability to PhopRNA using a pull-down assay. The result showed that PhoRpp21 is able to bind to PhopRNA in the absence of PhoRpp29, whereas PhoRpp29 alone has reduced affinity to PhopRNA, suggesting that PhoRpp21 primarily functions as a binding element for PhopRNA in the PhoRpp21-PhoRpp29 complex. Mutational analyses suggested that although individual positively charged clusters contribute little to the PhopRNA binding, Lys53, Lys54, and Lys56 at the N-terminal helix (α2) in PhoRpp21 and 10 C-terminal residues in PhoRpp29 are essential for PhopRNA activation. Moreover, deletion of a single stranded loop linking P11 and P12 helices in the PhopRNA S-domain impaired the PhoRpp21-PhoRpp29 complex binding to PhopRNA. Collectively, the present results suggest that PhoRpp21 binds the loop between P11 and P12 helices through overall positively charged clusters on the surface of the complex and serves as a scaffold for PhoRpp29 to optimize structural conformation of its N-terminal helix (α2) in PhoRpp21, as well as C-terminal residues in PhoRpp29, for RNase P activity. - Graphical abstract: A mechanistic model for the synergistic activation of PhopRNA by PhoRpp21 and PhoRpp29. PhoRpp21 binds to the loop between P11 and P12 helices in PhopRNA and serves as a scaffold for PhoRpp29 to optimize a structural conformation of a positively charged edge composed of lysine residues (●) at α2 in PhoRpp21and C-terminal residues (â–‹) in PhoRpp29 on the protein complex which probably stabilize stacking interactions between PhopRNA and pre-tRNA. ▲ indicates the processing site in pre-tRNA. Display Omitted - Highlights: • RNase P proteins PhoRpp21 and PhoRpp29 synergistically function in RNase P catalysis. • PhoRpp21 functions as an RNA-binding element in the PhoRpp21-PhoRpp29 complex. • PhoRpp21 serves as a scaffold for PhoRpp29 in RNase P. • PhoRpp21 binds the loop between P11 and P12 helices in the PhopRNA S-domain. • The molecular basis for the cooperativity of PhoRpp21 and PhoRpp29 is presented.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

SU-C-207A-07: Cumulative 18F-FDG Uptake Histogram Relative to Radiation Dose Volume Histogram of Lung After IMRT Or PSPT and Their Association with Radiation Pneumonitis

Purpose: To determine whether the difference in cumulative 18F-FDG uptake histogram of lung treated with either IMRT or PSPT is associated with radiation pneumonitis (RP) in patients with inoperable stage II and III NSCLC. Methods: We analyzed 24 patients from a prospective randomized trial to compare IMRT (n=12) with vs. PSPT (n=12) for inoperable NSCLC. All patients underwent PET-CT imaging between 35 and 88 days post-therapy. Post-treatment PET-CT was aligned with planning 4D CT to establish a voxel-to-voxel correspondence between post-treatment PET and planning dose images. 18F-FDG uptake as a function of radiation dose to normal lung was obtained for each patient. Distribution of the standard uptake value (SUV) was analyzed using a volume histogram method. The image quantitative characteristics and DVH measures were correlated with clinical symptoms of pneumonitis. Results: Patients with RP were present in both groups: 5 in the IMRT and 6 in the PSPT. The analysis of cumulative SUV histograms showed significantly higher relative volumes of the normal lung having higher SUV uptake in the PSPT patients for both symptomatic and asymptomatic cases (VSUV=2: 10% for IMRT vs 16% for proton RT and VSUV=1: 10% for IMRT vs 23% for proton RT). In addition, the SUV histograms for symptomatic cases in PSPT patients exhibited a significantly longer tail at the highest SUV. The absolute volume of the lung receiving the dose >70 Gy was larger in the PSPT patients. Conclusion: 18F-FDG uptake – radiation dose response correlates with RP in both groups of patients by means of the linear regression slope. SUV is higher for the PSPT patients for both symptomatic and asymptomatic cases. Higher uptake after PSPT patients is explained by larger volumes of the lung receiving high radiation dose.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Inverting infrasound data for the seismoacoustic source time functions and surface spall at the Source Physics Experiments Phase II: Dry Alluvium Geology

This report presents the infrasound data recorded as part of the Source Physics Experiment - Phase 2, Dry Alluvium Geology. This experiment, also known colloquially as DAG, consisted of four underground chemical explosions at the Nevada National Security Site. We focus our analysis on only the fourth explosion (DAG-4) as we determined that this was the only event that produced clear source-generated infrasound energy as recorded by the DAG sensors. We analyze the data using two inversion methods. The first method is designed to estimate the point-source seismoacoustic source time functions, and the second inversion method is designed to estimate the first-order characteristics (e.g. horizontal dimensions and maximum amplitude) of the actual spall surface. For both analysis methods, we are able to fit the data reasonably well, with various assumptions of the source model. The estimated seismoacoustic source appears to be a combination of a buried, isotropic explosion with a maximum amplitude of ~2 x 10 9 Nm and a vertically oriented force, applied to the Earth's surface with a maximum amplitude of 4 x 10 7 N. We use the vertically oriented force to simulate surface spall. The estimated spall surface has an approximate radius of ~40 m with a maximum acceleration magnitude in the range of 0.8 to 1.5 m/s/s. These estimates are approximately similar to the measured surface acceleration at the site.

58 GEOSCIENCES↗
DOE OSTI2018

Detecting DNA Methylation Using Surface-Enhanced Raman Spectroscopy

Among all of the epigenetic events that are responsible for various diseases such as cancer, lupus, and several birth defects, DNA methylation is one of the crucial ones. It occurs because of the alkylation of various bases. These modifications of genes carried through altered creations of proteins ultimately lead to various diseases. For example, a vital cause behind canine lymphoma is found to be DNA methylation in the guanine base. In this work, we analyzed the methylated and nonmethylated guanine structure with the assistance of surface-enhanced Raman spectroscopy and density functional theory (DFT). Because of their vulnerability for causing DNA methylation, the N7 and O6 positions of the guanine structure were the positions of interest with the addition of various adducts such as methyl, hydroxyethyl, and deuterated methyl groups. To distinguish the methylated samples from the nonmethylated ones, principal component analysis was performed, and the same analysis was used to distinguish their methylated positions and added adducts. The experimental results were then explained by structure optimization and frequency calculation of the molecules based on DFT calculations. To understand the charge distribution and detect the possible locations of alkylation of DNA bases, electrostatic potential, highest occupied molecular orbital, and lowest unoccupied molecular orbital for each of the molecules were analyzed, and the reactivity was discussed in the light of electronic structure calculations. The results presented in this study demonstrate a potential label-free technique to examine epigenetic modification of DNA.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2016

Effect of Ni content on the morphological evolution of Ni-YSZ solid oxide fuel cell electrodes

The coarsening of Ni in Ni–yttria-stabilized zirconia (YSZ) anodes is a potential cause of long term solid oxide fuel cells (SOFC) performance degradation. The specifics of the Ni-YSZ structure—including Ni/YSZ ratio, porosity, and particle size distributions—are normally selected to minimize anode polarization resistance, but they also impact long-term stability. A better understanding of how these factors influence long-term stability is important for designing more durable anodes. The effect of structural details, e.g., Ni-YSZ ratio, on Ni coarsening has not been quantified. Furthermore, prior measurements have been done by comparing evolved structures with control samples, such that sample-to-sample variations introduce errors. Here in this paper, we report a four dimensional (three spatial dimensions and time) study of Ni coarsening in Ni-YSZ anode functional layers with different Ni/YSZ ratios, using synchrotron x-ray nano-tomography. The continuous structural evolution was observed and analyzed at sub-100 nm resolution. It is shown quantitatively that increasing the Ni/YSZ ratio increases the Ni coarsening rate. This is due to both increased pore volume and a decrease in the YSZ volume fraction, such that there is more free volume and a less obtrusive YSZ network, both of which allow greater Ni coarsening. The results are shown to be in good agreement with a power-law coarsening model. In conclusion, the finding is critical for informing the design of SOFC electrode microstructures that limit coarsening and performance degradation.

36 MATERIALS SCIENCE↗