Results for “Methods: data analysis” — Page 66

DOE OSTI2014

Computerized detection of noncalcified plaques in coronary CT angiography: Evaluation of topological soft gradient prescreening method and luminal analysis

Purpose: The buildup of noncalcified plaques (NCPs) that are vulnerable to rupture in coronary arteries is a risk for myocardial infarction. Interpretation of coronary CT angiography (cCTA) to search for NCP is a challenging task for radiologists due to the low CT number of NCP, the large number of coronary arteries, and multiple phase CT acquisition. The authors conducted a preliminary study to develop machine learning method for automated detection of NCPs in cCTA. Methods: With IRB approval, a data set of 83 ECG-gated contrast enhanced cCTA scans with 120 NCPs was collected retrospectively from patient files. A multiscale coronary artery response and rolling balloon region growing (MSCAR-RBG) method was applied to each cCTA volume to extract the coronary arterial trees. Each extracted vessel was reformatted to a straightened volume composed of cCTA slices perpendicular to the vessel centerline. A topological soft-gradient (TSG) detection method was developed to prescreen for NCP candidates by analyzing the 2D topological features of the radial gradient field surface along the vessel wall. The NCP candidates were then characterized by a luminal analysis that used 3D geometric features to quantify the shape information and gray-level features to evaluate the density of the NCP candidates. With machine learning techniques, useful features were identified and combined into an NCP score to differentiate true NCPs from false positives (FPs). To evaluate the effectiveness of the image analysis methods, the authors performed tenfold cross-validation with the available data set. Receiver operating characteristic (ROC) analysis was used to assess the classification performance of individual features and the NCP score. The overall detection performance was estimated by free response ROC (FROC) analysis. Results: With our TSG prescreening method, a prescreening sensitivity of 92.5% (111/120) was achieved with a total of 1181 FPs (14.2 FPs/scan). On average, six features were selected during the tenfold cross-validation training. The average area under the ROC curve (AUC) value for training was 0.87 ± 0.01 and the AUC value for validation was 0.85 ± 0.01. Using the NCP score, FROC analysis of the validation set showed that the FP rates were reduced to 3.16, 1.90, and 1.39 FPs/scan at sensitivities of 90%, 80%, and 70%, respectively. Conclusions: The topological soft-gradient prescreening method in combination with the luminal analysis for FP reduction was effective for detection of NCPs in cCTA, including NCPs causing positive or negative vessel remodeling. The accuracy of vessel segmentation, tracking, and centerline identification has a strong impact on NCP detection. Studies are underway to further improve these techniques and reduce the FPs of the CADe system.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

DOE OSTI2013

Normal Tissue Complication Probability Modeling of Radiation-Induced Hypothyroidism After Head-and-Neck Radiation Therapy

Purpose: To determine the dose-response relationship of the thyroid for radiation-induced hypothyroidism in head-and-neck radiation therapy, according to 6 normal tissue complication probability models, and to find the best-fit parameters of the models. Methods and Materials: Sixty-five patients treated with primary or postoperative radiation therapy for various cancers in the head-and-neck region were prospectively evaluated. Patient serum samples (tri-iodothyronine, thyroxine, thyroid-stimulating hormone [TSH], free tri-iodothyronine, and free thyroxine) were measured before and at regular time intervals until 1 year after the completion of radiation therapy. Dose-volume histograms (DVHs) of the patients' thyroid gland were derived from their computed tomography (CT)-based treatment planning data. Hypothyroidism was defined as increased TSH (subclinical hypothyroidism) or increased TSH in combination with decreased free thyroxine and thyroxine (clinical hypothyroidism). Thyroid DVHs were converted to 2 Gy/fraction equivalent doses using the linear-quadratic formula with {alpha}/{beta} = 3 Gy. The evaluated models included the following: Lyman with the DVH reduced to the equivalent uniform dose (EUD), known as LEUD; Logit-EUD; mean dose; relative seriality; individual critical volume; and population critical volume models. The parameters of the models were obtained by fitting the patients' data using a maximum likelihood analysis method. The goodness of fit of the models was determined by the 2-sample Kolmogorov-Smirnov test. Ranking of the models was made according to Akaike's information criterion. Results: Twenty-nine patients (44.6%) experienced hypothyroidism. None of the models was rejected according to the evaluation of the goodness of fit. The mean dose model was ranked as the best model on the basis of its Akaike's information criterion value. The D{sub 50} estimated from the models was approximately 44 Gy. Conclusions: The implemented normal tissue complication probability models showed a parallel architecture for the thyroid. The mean dose model can be used as the best model to describe the dose-response relationship for hypothyroidism complication.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

DOE OSTI2018

Data Transferability and Collection Consistency in Marine Renewable Energy

Concerns about the potential effects of tidal turbines and wave energy devices on the marine environment continue to slow siting and permitting/consenting of single devices and arrays worldwide. While research studies and early results from post-installation monitoring over the past decade have informed interactions between marine renewable energy (MRE) devices, marine animals, and habitats, regulators still demonstrate considerable reluctance to accelerate the permitting/consenting process for devices and arrays. Furthermore, the MRE industry is struggling with the high costs of baseline assessments and post-installation monitoring, as well as long timelines for obtaining permits, which leads to uncertainty and risk related to project financing. Regulators require assessment and monitoring information to allow them to carry out the necessary analyses to describe, permit/consent, and manage the environmental risks associated with new MRE technologies and new uses of ocean space. One way to reduce risks to the industry and the environment and to allow for acceleration of the permitting/consenting process could be to transfer learning, analyses, and data sets from one country to another, among projects, and across jurisdictional boundaries. In addition, data are collected around early-stage MRE devices using many different methods, instruments, and measurement scales. If similar parameters and accessible methods of data collection were used for baseline assessments and post-installation monitoring around all early-stage devices and MRE developments, the results would be more readily comparable. This comparability would lead to a decrease in scientific uncertainty and support a common understanding of the risk of MRE devices to the marine environment. This in turn would facilitate more efficient and shorter permitting/consenting processes, which would decrease the financial risk for MRE project development. As a means of addressing the concept of transferring data (information, learning, analyses, and data sets) among projects and collecting data consistently, Annex IV has developed a data transferability process that has been socialized with the MRE community, which includes regulators, industry, developers, consultants, and researchers. The data transferability process consists of five components: 1. A Data Transferability Framework brings together data sets in an organized fashion, compares the applicability of each data set for use on other projects, and guides the process of data transfer 2. A Data Collection Consistency Table provides preferred measurement methods or processes, reporting units, and the most common methods of analysis or interpretation and use of data 3. A Monitoring Data Sets Discoverability Matrix allows a practitioner to discover data sets based on the approach presented in the Framework 4. Best Management Practices (BMPs) include five BMPs related to data transferability and collection consistency 5. An Implementation Plan presents an approach for implementing and applying the data transferability process. This report documents the background and development of the data transferability process and associated components and summarizes the next steps needed to successfully implement and apply the data transferability process.

16 TIDAL AND WAVE POWER↗

NASA NTRS2008

Vibroacoustic Response Data of Stiffened Panels and Cylinders

NASA has collected vibroacoustic response data on a variety of complex, aerospace structures to support research into numerical modeling of such structures. This data is being made available to the modeling community to promote the development and validation of analysis methods for these types of structures. Existing data from two structures is described, as well as plans for a data set from a third structure. The first structure is a 1.22 m by 1.22 m stiffened aluminum panel, typical of a commercial aircraft sidewall section. The second is an enclosed, stiffened aluminum cylinder, approximately 3.66 m long and 1.22 m in diameter, constructed to resemble a small aircraft fuselage with no windows and a periodic structure. The third structure is a filament-wound composite cylinder with composite stiffeners. Numerous combinations of excitation and response variables were measured on the structures, including: shaker excitation; diffuse acoustic field; velocity response from a laser vibrometer; intensity scans; and point acceleration.

Cabell, Randolph↗

NASA NTRS1993

An efficient liner cooling scheme for advanced small gas turbine combustors

A joint Army/NASA program was conducted to design, fabricate, and test an advanced, small gas turbine, reverse-flow combustor utilizing a compliant metal/ceramic (CMC) wall cooling concept. The objectives of this effort were to develop a design method (basic design data base and analysis) for the CMC cooling technique and then demonstrate its application to an advanced cycle, small, reverse-flow combustor with 3000 F burner outlet temperature. The CMC concept offers significant improvements in wall cooling effectiveness resulting in a large reduction in cooling air requirements. Therefore, more air is available for control of burner outlet temperature pattern in addition to the benefits of improved efficiency, reduced emissions, and lower smoke levels. The program was divided into four tasks. Task 1 defined component materials and localized design of the composite wall structure in conjunction with development of basic design models for the analysis of flow and heat transfer through the wall. Task 2 included implementation of the selected materials and validated design models during combustor preliminary design. Detail design of the selected combustor concept and its refinement with 3D aerothermal analysis were completed in Task 3. Task 4 covered detail drawings, process development and fabrication, and a series of burner rig tests. The purpose of this paper is to provide details of the investigation into the fundamental flow and heat transfer characteristics of the CMC wall structure as well as implementation of the fundamental analysis method for full-scale combustor design.

Paskin, Marc D.↗

DOE OSTI2015

Morpho-Hawk

Morpho-Hawk applies projectional mathematical morphology in a fundamentally new way. Morpho-Hawk extracts object information from digital images by filtering with simple geometrical figures such as rectangles or simple curves. Two core algorithms are used to accomplish this: 1) Object Detection and Feature Extraction from Images: Using projectional morphology, Morpho-Hawk finds features of interest within an image, such as contours, shapes, colors, infrared spectra, and more. Because Morpho-Hawk identifies features based on shape or form, the method can uniquely handle different image or object conditions and directions. MorphoHawk can evaluate all possible images of the analyzed scene using the same transformations that are applied just to one image of that scene. Hence, recognizing a defect within an image or part of an image provides information to assist in recognizing other objects in the image. In addition, known background image information can be morphologically subtracted out in order to focus on the appearance or disappearance of the features of interest. 2) Object Analysis: Upon detection of an object of interest, Morpho-Hawk can analyze the object based learned information from prior images or end-user defined criteria for certain object of special interest by selecting feature (e.g., color, size, shape, apparent volume) and/or symbol (e.g., letter, number). The novel algorithm can analyze targeted objects, even as conditions of such as illumination, shadows, and spectral regions change strongly in following images as compared to the original image. This enables robust recognition, interpolation and prediction. As the analysis shows the presence of these features in the optical signal, the algorithm can make a determination based on user defined probability. The object information can be stored for later analysis using simple morphological data compression methods and/or retention of the original optical images.

Glazoff, MichaelV.↗

DOE OSTI2016

ARE THERE TWO DISTINCT SOLAR ENERGETIC PARTICLE RELEASES IN THE 2012 MAY 17 GROUND LEVEL ENHANCEMENT EVENT?

We examine ion release times in the solar vicinity for the 2012 May 17 Ground Level Enhancement event using the velocity dispersion analysis method. In situ energetic proton data from Solar and Heliospheric Observatory (SOHO)/Energetic and Relativistic Nuclei and Electron and Geostationary Operational Environmental Satellite are used. We find two distinct releases of Solar Energetic Particles (SEPs) near the Sun, separated by ∼40 minutes. From soft X-ray observations, we find that the first release coincides with the solar flare eruption: the release starts from the flare onset and ends near the peak of the soft X-ray; type-III radio bursts also occur when the release starts. A type II radio burst may also start at the begining of the release. However, the associated Coronal Mass Ejection (CME) only has a height of 0.08R{sub s} from extrapolation of SOHO/LASCO data. At the start of the second release, the CME propagates to more than 8.4R{sub s} in height, and there are signatures of an enhanced type II radio burst. The time-integrated spectra for the two releases differ. The spectrum for the second release shows the common double-power-law feature of gradual SEP events. The spectrum for the first release does not resemble power laws because there is considerable modulation at lower energies. Based on our analysis, we suggest that SEPs of the first release were dominated by particles accelerated at the flare, and those of the second release were dominated by particles accelerated at the associated CME-driven shock. Our study may be important to understand certain extreme SEP events.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2019

COMBIgor: Data-Analysis Package for Combinatorial Materials Science

Combinatorial experiments involve synthesis of sample libraries with lateral composition gradients requiring spatially-resolved characterization of structure and properties. Here, due to maturation of combinatorial methods and their successful application in many fields, the modern combinatorial laboratory produces diverse and complex data sets requiring advanced analysis and visualization techniques. In order to utilize these large data sets to uncover new knowledge, the combinatorial scientist must engage in data science. For data science tasks, most laboratories adopt common-purpose data management and visualization software. However, processing and cross-correlating data from various measurement tools is no small task for such generic programs. Here we describe COMBIgor, a purpose-built open-source software package written in the commercial Igor Pro environment, designed to offer a systematic approach to loading, storing, processing, and visualizing combinatorial data sets. It includes (1) methods for loading and storing data sets from combinatorial libraries, (2) routines for streamlined data processing, and (3) data analysis and visualization features to construct figures. Most importantly, COMBIgor is designed to be easily customized by a laboratory, group, or individual in order to integrate additional instruments and data-processing algorithms. Utilizing the capabilities of COMBIgor can significantly reduce the burden of data management on the combinatorial scientist.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS1980

Landsat imagery for hydrologic modeling

The cost and effectiveness of developing land cover information derived from Landsat imagery for hydrologic studies are compared with the cost and effectiveness of conventional sources. The analysis shows that the conventional and Landsat methods are nearly equally effective in providing adequate land cover data for hydrologic studies. The total cost effectiveness analysis demonstrates that the conventional method is cost effective for a study area of less than 26 sq km and that the Landsat method is to be preferred for areas of more than 26 sq km.

Taylor, R. S.↗

DOE OSTI2014

Langmuir probe analysis in electronegative plasmas

This paper compares two methods to analyze Langmuir probe data obtained in electronegative plasmas. The techniques are developed to allow investigations in plasmas, where the electronegativity α{sub 0} = n{sub –}/n{sub e} (the ratio between the negative ion and electron densities) varies strongly. The first technique uses an analytical model to express the Langmuir probe current-voltage (I-V) characteristic and its second derivative as a function of the electron and ion densities (n{sub e}, n{sub +}, n{sub –}), temperatures (T{sub e}, T{sub +}, T{sub –}), and masses (m{sub e}, m{sub +}, m{sub –}). The analytical curves are fitted to the experimental data by adjusting these variables and parameters. To reduce the number of fitted parameters, the ion masses are assumed constant within the source volume, and quasi-neutrality is assumed everywhere. In this theory, Maxwellian distributions are assumed for all charged species. We show that this data analysis can predict the various plasma parameters within 5–10%, including the ion temperatures when α{sub 0} > 100. However, the method is tedious, time consuming, and requires a precise measurement of the energy distribution function. A second technique is therefore developed for easier access to the electron and ion densities, but does not give access to the ion temperatures. Here, only the measured I-V characteristic is needed. The electron density, temperature, and ion saturation current for positive ions are determined by classical probe techniques. The electronegativity α{sub 0} and the ion densities are deduced via an iterative method since these variables are coupled via the modified Bohm velocity. For both techniques, a Child-Law sheath model for cylindrical probes has been developed and is presented to emphasize the importance of this model for small cylindrical Langmuir probes.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

NASA NTRS1989

Effects of nonlinear aerodynamics and static aeroelasticity on mission performance calculations for a fighter aircraft

During conceptual design studies of advanced aircraft, the usual practice is to use linear theory to calculate the aerodynamic characteristics of candidate rigid (nonflexible) geometric external shapes. Recent developments and improvements in computational methods, especially computational fluid dynamics (CFD), provide significantly improved capability to generate detailed analysis data for the use of all disciplines involved in the evaluation of a proposed aircraft design. A multidisciplinary application of such analysis methods to calculate the effects of nonlinear aerodynamics and static aeroelasticity on the mission performance of a fighter aircraft concept is described. The aircraft configuration selected for study was defined in a previous study using linear aerodynamics and rigid geometry. The results from the previous study are used as a basis of comparison for the data generated herein. Aerodynamic characteristics are calculated using two different nonlinear theories, potential flow and rotational (Euler) flow. The aerodynamic calculations are performed in an iterative procedure with an equivalent plate structural analysis method to obtain lift and drag data for a flexible (nonrigid) aircraft. These static aeroelastic data are then used in calculating the combat and mission performance characteristics of the aircraft.

Giles, Gary L.↗

DOE OSTI2017

Trace: a high-throughput tomographic reconstruction engine for large-scale datasets

Abstract Background Modern synchrotron light sources and detectors produce data at such scale and complexity that large-scale computation is required to unleash their full power. One of the widely used imaging techniques that generates data at tens of gigabytes per second is computed tomography (CT). Although CT experiments result in rapid data generation, the analysis and reconstruction of the collected data may require hours or even days of computation time with a medium-sized workstation, which hinders the scientific progress that relies on the results of analysis. Methods We present Trace, a data-intensive computing engine that we have developed to enable high-performance implementation of iterative tomographic reconstruction algorithms for parallel computers. Trace provides fine-grained reconstruction of tomography datasets using both (thread-level) shared memory and (process-level) distributed memory parallelization. Trace utilizes a special data structure called replicated reconstruction object to maximize application performance. We also present the optimizations that we apply to the replicated reconstruction objects and evaluate them using tomography datasets collected at the Advanced Photon Source. Results Our experimental evaluations show that our optimizations and parallelization techniques can provide 158× speedup using 32 compute nodes (384 cores) over a single-core configuration and decrease the end-to-end processing time of a large sinogram (with 4501 × 1 × 22,400 dimensions) from 12.5 h to <5 min per iteration. Conclusion The proposed tomographic reconstruction engine can efficiently process large-scale tomographic data using many compute nodes and minimize reconstruction times.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

NASA NTRS1999

Two-Dimensional Fourier Transform Analysis of Helicopter Flyover Noise

A method to separate main rotor and tail rotor noise from a helicopter in flight is explored. Being the sum of two periodic signals of disproportionate, or incommensurate frequencies, helicopter noise is neither periodic nor stationary. The single Fourier transform divides signal energy into frequency bins of equal size. Incommensurate frequencies are therefore not adequately represented by any one chosen data block size. A two-dimensional Fourier analysis method is used to separate main rotor and tail rotor noise. The two-dimensional spectral analysis method is first applied to simulated signals. This initial analysis gives an idea of the characteristics of the two-dimensional autocorrelations and spectra. Data from a helicopter flight test is analyzed in two dimensions. The test aircraft are a Boeing MD902 Explorer (no tail rotor) and a Sikorsky S-76 (4-bladed tail rotor). The results show that the main rotor and tail rotor signals can indeed be separated in the two-dimensional Fourier transform spectrum. The separation occurs along the diagonals associated with the frequencies of interest. These diagonals are individual spectra containing only information related to one particular frequency.

SantaMaria, Odilyn L.↗

NASA NTRS1999

Two-Dimensional Fourier Transform Analysis of Helicopter Flyover Noise

A method to separate main rotor and tail rotor noise from a helicopter in flight is explored. Being the sum of two periodic signals of disproportionate, or incommensurate frequencies, helicopter noise is neither periodic nor stationary. The single Fourier transform divides signal energy into frequency bins of equal size. Incommensurate frequencies are therefore not adequately represented by any one chosen data block size. A two-dimensional Fourier analysis method is used to separate main rotor and tail rotor noise. The two-dimensional spectral analysis method is first applied to simulated signals. This initial analysis gives an idea of the characteristics of the two-dimensional autocorrelations and spectra. Data from a helicopter flight test is analyzed in two dimensions. The test aircraft are a Boeing MD902 Explorer (no tail rotor) and a Sikorsky S-76 (4-bladed tail rotor). The results show that the main rotor and tail rotor signals can indeed be separated in the two-dimensional Fourier transform spectrum. The separation occurs along the diagonals associated with the frequencies of interest. These diagonals are individual spectra containing only information related to one particular frequency.

SantaMaria, Odilyn L.↗

NASA NTRS1999

Two-Dimensional Fourier Transform Analysis of Helicopter Flyover Noise

A method to separate main rotor and tail rotor noise from a helicopter in flight is explored. Being the sum of two periodic signals of disproportionate, or incommensurate frequencies, helicopter noise is neither periodic nor stationary. The single Fourier transform divides signal energy into frequency bins of equal size. Incommensurate frequencies are therefore not adequately represented by any one chosen data block size. A two-dimensional Fourier analysis method is used to separate main rotor and tail rotor noise. The two-dimensional spectral analysis method is first applied to simulated signals. This initial analysis gives an idea of the characteristics of the two-dimensional autocorrelations and spectra. Data from a helicopter flight test is analyzed in two dimensions. The test aircraft are a Boeing MD902 Explorer (no tail rotor) and a Sikorsky S-76 (4-bladed tail rotor). The results show that the main rotor and tail rotor signals can indeed be separated in the two-dimensional Fourier transform spectrum. The separation occurs along the diagonals associated with the frequencies of interest. These diagonals are individual spectra containing only information related to one particular frequency.

SantaMaria, Odilyn L.↗

NASA NTRS2005

A Method to Analyze Tail Buffet Loads of Aircraft

Aircraft designers commit significant resources to the design of aircraft in meeting performance goals. Despite fulfilling traditional design requirements, many fighter aircraft have encountered buffet loads when demonstrating their high angle-of-attack maneuver capabilities. As a result, during test or initial production phases of fighter development programs, many new designs are impacted, usually in a detrimental way, by resulting in reassessing designs or limiting full mission capability. These troublesome experiences usually stem from overlooking or completely ignoring the effects of buffet during the design phase of aircraft. Perhaps additional requirements are necessary that addresses effects of buffet in achieving best aircraft performance in fulfilling mission goals. This paper describes a reliable, fairly simple, but quite general buffet loads analysis method to use in the initial design phases of fighter-aircraft development. The method is very similar to the random gust load analysis that is now commonly available in a commercial code, which this analysis capability is based, with some key modifications. The paper describes the theory and the implementation of the methodology. The method is demonstrated on a JSF prototype example problem. The demonstration also serves as a validation of the method, since, in the paper, the analysis is shown to nearly match the flight data. In addition, the paper demonstrates how the analysis method can be used to assess candidate design concepts in determining a satisfactory final aircraft configuration.

Pototzky, Anthony S.↗

NASA NTRS2005

A Tail Buffet Loads Prediction Method for Aircraft at High Angles of Attack

Aircraft designers commit significant resources to the design of aircraft in meeting performance goals. Despite fulfilling traditional design requirements, many fighter aircraft have encountered buffet loads when demonstrating their high angle-of-attack maneuver capabilities. As a result, during test or initial production phases of fighter development programs, many new designs are impacted, usually in a detrimental way, by resulting in reassessing designs or limiting full mission capability. These troublesome experiences usually stem from overlooking or completely ignoring the effects of buffet during the design phase of aircraft. Perhaps additional requirements are necessary that addresses effects of buffet in achieving best aircraft performance in fulfilling mission goals. This paper describes a reliable, fairly simple, but quite general buffet loads analysis method to use in the initial design phases of fighter-aircraft development. The method is very similar to the random gust load analysis that is now commonly available in a commercial code, which this analysis capability is based, with some key modifications. The paper describes the theory and the implementation of the methodology. The method is demonstrated on a JSF prototype example problem. The demonstration also serves as a validation of the method, since, in the paper, the analysis is shown to nearly match the flight data. In addition, the paper demonstrates how the analysis method can be used to assess candidate design concepts in determining a satisfactory final aircraft configuration.

Pototzky, Anthony S.↗

NASA NTRS1987

Use of a minimum rate of change formalism to quantify variability of extragalactic X-ray sources

A method to obtain rigorous, quantitative constraints on the rate of variability is suggested. The method is motivated by the case when the existence of time variability is unequivocal, but the statistical uncertainties are too large to apply more direct methods such as power spectrum analysis. Conceptually the data are fitted to a function of time and a set of free parameters. The method of Lagrange multipliers is used to solve for that parameter set which minimizes the value of the derivative at time t(m). The result can be related physically to the minimum efficiency with which rest mass must be converted to radiation energy. Slightly different formulations of the general principal are used to estimate maximum source size scales associated with the variability.

Schwartz, Daniel A.↗