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Atmospheric Soundings from AIRS/AMSU/HSB

AIRS was launched on EOS Aqua on May 4, 2002, together with AMSU A and HSB, to form a next generation polar orbiting infrared and microwave atmospheric sounding system. The primary products of AIRS/AMSU/HSB are twice daily global fields of atmospheric temperature-humidity profiles, ozone profiles, sea/land surface skin temperature, and cloud related parameters including OLR. The sounding goals of AIRS are to produce 1 km tropospheric layer mean temperatures with an rms error of lK, and 1 km tropospheric layer precipitable water with an rms error of 20%, in cases with up to 80% effective cloud cover. Pre-launch simulation studies indicated that these results should be achievable. Minor modifications have been made to the pre-launch retrieval algorithm as alluded to in this paper. Sample fields of parameters retrieved from AIRS/AMSU/HSB data are presented and temperature profiles are validated as a function of retrieved effective fractional cloud cover. As in simulation, the degradation of retrieval accuracy with increasing cloud cover is small. Select fields are also compared to those contained in the ECMWF analysis, done without the benefit of AIRS data, to demonstrate information that AIRS can add to that already contained in the ECMWF analysis. Assimilation of AIRS temperature soundings in up to 80% cloud cover for the month of January 2003 into the GSFC FVSSI data assimilation system resulted in improved 5 day forecasts globally, both with regard to anomaly correlation coefficients and the prediction of location and intensity of cyclones.

Susskind, Joel↗

Mosaic organization of DNA nucleotides

Long-range power-law correlations have been reported recently for DNA sequences containing noncoding regions. We address the question of whether such correlations may be a trivial consequence of the known mosaic structure ("patchiness") of DNA. We analyze two classes of controls consisting of patchy nucleotide sequences generated by different algorithms--one without and one with long-range power-law correlations. Although both types of sequences are highly heterogenous, they are quantitatively distinguishable by an alternative fluctuation analysis method that differentiates local patchiness from long-range correlations. Application of this analysis to selected DNA sequences demonstrates that patchiness is not sufficient to account for long-range correlation properties.

NASA Discipline Number 14-10↗

Preliminary SnowSAR Results from SnowEx 2017

SnowEx 2017 was the first in a multi-year series of airborne remote sensing campaigns, designed to address gaps in snow retrieval techniques in preparation for a future snow satellite mission. A variety of sensor types were flown to collect multi-sensor airborne data. In combination with detailed ground truth, this multi-sensor dataset enables critical trade studies to determine optimum sensor-plus-model combinations for different snow conditions and confounding factors. Up to half of terrestrial snow-covered areas are forested, and forests are a major confounding factor for global snow retrievals. Therefore, the main focus of SnowEx 2017 was evaluating the performance of the various sensing techniques to retrieve snow water equivalent (SWE) under steadily increasing amounts of forest cover. The primary site of Grand Mesa, Colorado, USA was selected for its natural gradients of forest density and SWE with a minimum of other factors. Radar retrievals of SWE relying on volume scattering have been studied for three decades, using a variety of frequencies, with varying degrees of success. The most recent volume scattering algorithms have focused on using 2 to 3 frequencies and both co- and cross-polarizations in the 9—18 GHz range (X through Ku bands). As such, one of the primary SnowEx 2017 airborne sensors was a dual-band (X & Ku) radar, the SnowSAR. Earlier versions of SnowSAR were used in 2011 and 2012 campaigns in Finland as well as a 2013 campaign in Canada. For SnowEx 2017, SnowSAR was installed on a P-3 aircraft from the US Naval Research Laboratory. Challenges associated with the aircraft, the installation, schedule, and flying weather all contrived to limit the amount of data collected. However, months of painstaking processing has yielded data that should be of value to the original objectives of SnowEx 2017. This paper will describe in detail the SnowSAR data that were collected, and provide quality assessments of the backscatter coefficient in terms of date, time, location, frequency, polarization, snow conditions, overlap with ground truth sites, forest density, etc. The challenges as well as potential remedies/caveats will be described in order to help guide users and maximize exploitation of this valuable data.

airborne sensors↗

Inferring iron-oxide species content in atmospheric mineral dust from DSCOVR EPIC observations

The iron-oxide content of dust in the atmosphere and most notably its apportionment between hematite (α-Fe2O3) and goethite (α-FeOOH) are key determinants in quantifying dust’s light absorption, its top of atmosphere UV radiances used for dust monitoring, and ultimately shortwave dust direct radiative effects (DRE). Hematite and goethite column mass concentrations and iron-oxide mass fractions of total dust mass concentration were retrieved from the DeepSpace Climate Observatory (DSCOVR) Earth Polychromatic Imaging Camera (EPIC) measurements in the ultraviolet–visible (UV–Vis) channels. The retrievals were performed for dust-identified aerosol plumes over land using aerosol optical depth (AOD) and spectral imaginary refractive index provided by the Multi-Angle Implementation of Atmospheric Correction (MAIAC) algorithm over six continental regions (North America, North Africa, West Asia, Central Asia, EastAsia, and Australia). The dust particles are represented as an internal mixture of non-absorbing host and absorbing hematite and goethite. We use the Maxwell–Garnett effective medium approximation with carefully selected complex refractive indices of hematite and goethite that produce mass fractions of iron oxides species consistent with in situ values found in the literature to derive the hematite and goethite volumetric/mass concentrations from MAIAC EPIC products. We compared the retrieved hematite and goethite concentrations with in situ dust aerosol mineralogical content measurements, as well as with published data. Our data display variations within the published range of hematite, goethite, and iron-oxide mass fractions for pure mineral dust cases. A specific analysis is presented for 15 sites over the main dust source regions. Sites in the central Sahara, Sahel, and Middle East exhibit a greater temporal variability of iron oxides relative to other sites. Niger site(13.52°N, 2.63°E) is dominated by goethite over Harmattan season with median of ~2 weight percentage (wt.%) of iron-oxide. Saudi Arabia site (27.49°N, 41.98°E) over Middle East also exhibited surge of goethite content with the beginning of Shamal season. The Sahel dust is richer in iron-oxide than Saharan and northern China dust except in Summer. The Bodélé Depression area shows a distinctively lower iron-oxide concentration (~1 wt.%) throughout the year. Finally, we show that EPIC data allow to constrain the hematite refractive index. Specifically, we select 5 out of 13 different number of hematite refractive indices widely variable in published laboratory studies by constraining the iron-oxide mass ratio to the known measured values. Provided climatology of hematite and goethite mass fractions across main dust regions of the Earth will be useful for dust shortwave DRE studies and climate modeling.

Sujung Go↗

Performance Metrics for the Assessment of Satellite Data Products: An Ocean Color Case Study

Performance assessment of ocean color satellite data has generally relied on statistical metrics chosen for their common usage and the rationale for selecting certain metrics is infrequently explained. Commonly reported statistics based on mean squared errors, such as the coefficient of determination (r2), root mean square error, and regression slopes, are most appropriate for Gaussian distributions without outliers and, therefore, are often not ideal for ocean color algorithm performance assessment, which is often limited by sample availability. In contrast, metrics based on simple deviations, such as bias and mean absolute error, as well as pair-wise comparisons, often provide more robust and straightforward quantities for evaluating ocean color algorithms with non-Gaussian distributions and outliers. This study uses a SeaWiFS chlorophyll-a validation data set to demonstrate a framework for satellite data product assessment and recommends a multimetric and user-dependent approach that can be applied within science, modeling, and resource management communities.

remote sensing↗

Simultaneous Retrieval of Selected Optical Water Quality Indicators From Landsat-8, Sentinel-2, and Sentinel-3

Constructing multi-source satellite-derived water quality (WQ) products in inland and nearshore coastal waters from the past, present, and future missions is a long-standing challenge. Despite inherent differences in sensors’ spectral capability, spatial sampling, and radiometric performance, research efforts focused on formulating, implementing, and validating universal WQ algorithms continue to evolve. This research extends a recently developed machine-learning (ML) model, i.e., Mixture Density Networks (MDNs) (Pahlevan et al., 2020; Smith et al., 2021), to the inverse problem of simultaneously retrieving WQ indicators, including chlorophyll-a (Chla), Total Suspended Solids (TSS), and the absorption by Colored Dissolved Organic Matter at 440 nm (a cdom (440)), across a wide array of aquatic ecosystems. We use a database of in situ measurements to train and optimize MDN models developed for the relevant spectral measurements (400–800 nm) of the Operational Land Imager (OLI), MultiSpectral Instrument (MSI), and Ocean and Land Color Instrument (OLCI) aboard the Landsat-8, Sentinel-2, and Sentinel-3 missions, respectively. Our two performance assessment approaches, namely hold-out and leave-one-out, suggest significant, albeit varying degrees of improvements with respect to second-best algorithms, depending on the sensor and WQ indicator (e.g., 68%, 75%, 117% improvements based on the hold-out method for Chla, TSS, and a cdom (440), respectively from MSI-like spectra). Using these two assessment methods, we provide theoretical upper and lower bounds on model performance when evaluating similar and/or out-of-sample datasets. To evaluate multi-mission product consistency across broad spatial scales, map products are demonstrated for three near-concurrent OLI, MSI, and OLCI acquisitions. Overall, estimated TSS and a cdom (440) from these three missions are consistent within the uncertainty of the model, but Chla maps from MSI and OLCI achieve greater accuracy than those from OLI. By applying two different atmospheric correction processors to OLI and MSI images, we also conduct matchup analyses to quantify the sensitivity of the MDN model and best-practice algorithms to uncertainties in reflectance products. Our model is less or equally sensitive to these uncertainties compared to other algorithms. Recognizing their uncertainties, MDN models can be applied as a global algorithm to enable harmonized retrievals of Chla, TSS, and a cdom (440) in various aquatic ecosystems from multi-source satellite imagery. Local and/or regional ML models tuned with an apt data distribution (e.g., a subset of our dataset) should nevertheless be expected to outperform our global model.

Machine learning↗

Beyond maximum entropy: Fractal Pixon-based image reconstruction

We have developed a new Bayesian image reconstruction method that has been shown to be superior to the best implementations of other competing methods, including Goodness-of-Fit methods such as Least-Squares fitting and Lucy-Richardson reconstruction, as well as Maximum Entropy (ME) methods such as those embodied in the MEMSYS algorithms. Our new method is based on the concept of the pixon, the fundamental, indivisible unit of picture information. Use of the pixon concept provides an improved image model, resulting in an image prior which is superior to that of standard ME. Our past work has shown how uniform information content pixons can be used to develop a 'Super-ME' method in which entropy is maximized exactly. Recently, however, we have developed a superior pixon basis for the image, the Fractal Pixon Basis (FPB). Unlike the Uniform Pixon Basis (UPB) of our 'Super-ME' method, the FPB basis is selected by employing fractal dimensional concepts to assess the inherent structure in the image. The Fractal Pixon Basis results in the best image reconstructions to date, superior to both UPB and the best ME reconstructions. In this paper, we review the theory of the UPB and FPB pixon and apply our methodology to the reconstruction of far-infrared imaging of the galaxy M51. The results of our reconstruction are compared to published reconstructions of the same data using the Lucy-Richardson algorithm, the Maximum Correlation Method developed at IPAC, and the MEMSYS ME algorithms. The results show that our reconstructed image has a spatial resolution a factor of two better than best previous methods (and a factor of 20 finer than the width of the point response function), and detects sources two orders of magnitude fainter than other methods.

Puetter, Richard C.↗

Enhancing the ISIS-I Topside Digital Ionogram Database

Selected original analog telemetry tapes from three of the topside-sounder satellites of theInternational Satellites for Ionospheric Studies (ISIS) program, namely Alouette 2, ISIS I, and ISIS II, wereused in an earlier project to produce more than ½ million digital topside ionograms; the resulting digitaltopside ionograms from ISIS II were used to produce more than 86,000 globally distributed vertical topsideionospheric electron density profiles Ne(h) that cover a time span of more than a solar cycle. These Ne(h) wereproduced using the Topside Ionogram Scaler with True height algorithm auto-scaling software. Beforeattempting to automatically process Alouette-2 or ISIS-I ionograms, a data-enhancement project wasinitiated so as to increase the number of ionograms suitable for manual scaling and to increase theauto-processing success rate. These enhancements were mainly to correct problems that often occurredduring the analog-to-digital conversion of the original telemetry tapes. Here we illustrate the improvementsmade to the ISIS-I digital topside ionograms and compare Ne values at the satellite altitude and Ne(h)profiles, based on the manual scaling of selected ionograms, to both the auto-scaled values and thepredictions of the International Reference Ionosphere 2016 model. The results indicate the need to improvethe available auto-processing software for the new ISIS-I digital ionograms and that International ReferenceIonosphere 2016 predicts midlatitude winter topside Ne values that are too high in the late morning andat noon but too low in the early morning.

Benson, Robert F.↗

Theoretical and software considerations for general dynamic analysis using multilevel substructured models

The dynamic analysis of complex structural systems using the finite element method and multilevel substructured models is presented. The fixed-interface method is selected for substructure reduction because of its efficiency, accuracy, and adaptability to restart and reanalysis. This method is extended to reduction of substructures which are themselves composed of reduced substructures. The implementation and performance of the method in a general purpose software system is emphasized. Solution algorithms consistent with the chosen data structures are presented. It is demonstrated that successful finite element software requires the use of software executives to supplement the algorithmic language. The complexity of the implementation of restart and reanalysis porcedures illustrates the need for executive systems to support the noncomputational aspects of the software. It is shown that significant computational efficiencies can be achieved through proper use of substructuring and reduction technbiques without sacrificing solution accuracy. The restart and reanalysis capabilities and the flexible procedures for multilevel substructured modeling gives economical yet accurate analyses of complex structural systems.

Schmidt, R. J.↗

Space radiation shielding for a Martian habitat

Radiation shielding analyses are performed for a candidate Mars base habitat. The Langley cosmic ray transport code and the Langley nucleon transport code are used to quantify the transport and attenuation of galactic cosmic rays and solar flare protons through both the Martian atmosphere and regolith shielding. Doses at the surface and at various altitudes were calculated in a previous study using both a high-density and a low-density Mars atmosphere model. This study extends the previous low-density results to include the further transport of the ionizing radiation that reaches the surface through additional shielding provided by Martian regolith. A four-compound regolith model, which includes SiO2, Fe2O3, MgO, and CaO, was selected based on the chemistry of the Viking 1 Lander site. The spectral fluxes of heavy charged particles and the corresponding dosimetric quantities are computed for a series of thicknesses in the shield media after traversing the atmosphere. These data are then used as input to algorithms for a specific shield geometry. The results are presented as the maximum dose received in the center of the habitat versus various shield thicknesses for a base at an altitude of 0 km and 8 km.

Simonsen, Lisa C.↗

Resource Selection Using Execution and Queue Wait Time Predictions

Computational grids provide users with many possible places to execute their applications. We wish to help users select where to run their applications by providing predictions of the execution times of applications on space shared parallel computers and predictions of when scheduling systems for such parallel computers will start applications. Our predictions are based on instance based learning techniques and simulations of scheduling algorithms. We find that our execution time prediction techniques have an average error of 37 percent of the execution times for trace data recorded from SGI Origins at NASA Ames Research Center and that this error is 67 percent lower than the error of user estimates. We also find that the error when predicting how long applications will wait in scheduling queues is 95 percent of mean queue wait times when using our execution time predictions and this is 57 percent lower than if we use user execution time estimates.

Warren, Smith↗

Resource Selection Using Execution and Queue Wait Time Predictions

Computational grids provide users with many possible places to execute their applications. We wish to help users select where to run their applications by providing predictions of the execution times of applications on space shared parallel computers and predictions of when scheduling systems for such parallel computers will start applications. Our predictions are based on instance based learning techniques and simulations of scheduling algorithms. We find that our execution time prediction techniques have an average error of 37 percent of the execution times for trace data recorded from SGI Origins at NASA Ames Research Center and that this error is 67 percent lower than the error of user estimates. We also find that the error when predicting how long applications will wait in scheduling queues is 95 percent of mean queue wait times when using our execution time predictions and this is 57 percent lower than if we use user execution time estimates.

Smith, Warren↗

Diagnosability-Based Sensor Placement through Structural Model Decomposition

Systems health management, and in particular fault diagnosis, is important for ensuring safe, correct, and efficient operation of complex engineering systems. The performance of an online health monitoring system depends critically on the available sensors of the system. However, the set of selected sensors is subject to many constraints, such as cost and weight, and hence, these sensors must be selected judiciously. This paper presents an offline design-time sensor placement approach for complex systems. Our diagnosis method is built upon the analysis of model-based residuals, which are computed using structural model decomposition. Sensor placement in this framework manifests as a residual selection problem, and we aim to find the set of residuals that achieves single-fault diagnosability of the system, uses the minimum number of sensors, and corresponds to the best model decomposition for the best distribution of the diagnosis system. We present a set of algorithms for solving this problem and compare their performance in terms of computational complexity and optimality of solutions. We demonstrate the approach using a benchmark multi-tank system.

Daigle, Matthew↗

Dynamic Spectrum Allocation in Urban Air Transportation System via Deep Reinforcement Learning

The emerging concepts of Urban Air Mobility (UAM) and Advanced Air Mobility (AAM) open a new paradigm for urban air transportation. A big challenge is that these new aerial vehicles will quickly saturate the already crowded aviation spectrum, which is an essential resource to ensure reliable communications for safe operations. In this paper, we consider an air transportation system where multiple aerial vehicles are operated to transport passengers or cargo from different sources to destinations along their pre-defined paths. During the flight, the minimum communication Quality of Service (QoS) requirement must be achieved to ensure flight safety. Our objective is to minimize the average mission completion time by jointly optimizing the velocity selection and spectrum allocation for all aerial vehicles. We formulate the optimization problem as a multi-stage Markov Decision Process (MDP) where the optimization variables are coupled together. A multi-agent Deep Reinforcement Learning (DRL) based solution is proposed where Value Decomposition Networks (VDN) algorithm is utilized to take discrete actions. Additionally, we propose a heuristic greedy algorithm as a baseline solution. Simulation results show that our learning based solution outperforms the heuristic greedy algorithm and another Orthogonal Multiple Access (OMA) solution in minimizing the mission completion time.

Ruixuan Han↗

Dynamic Spectrum Allocation in Urban Air Transportation System via Deep Reinforcement Learning

The emerging concepts of Urban Air Mobility (UAM) and Advanced Air Mobility (AAM) open a new paradigm for urban air transportation. A big challenge is that these new aerial vehicles will quickly saturate the already crowded aviation spectrum, which is an essential resource to ensure reliable communications for safe operations. In this paper, we consider an air transportation system where multiple aerial vehicles are operated to transport passengers or cargo from different sources to destinations along their pre-defined paths. During the flight, the minimum communication Quality of Service (QoS) requirement must be achieved to ensure flight safety. Our objective is to minimize the average mission completion time by jointly optimizing the velocity selection and spectrum allocation for all aerial vehicles. We formulate the optimization problem as a multi-stage Markov Decision Process (MDP) where the optimization variables are coupled together. A multi-agent Deep Reinforcement Learning (DRL) based solution is proposed where Value Decomposition Networks (VDN) algorithm is utilized to take discrete actions. Additionally, we propose a heuristic greedy algorithm as a baseline solution. Simulation results show that our learning based solution outperforms the heuristic greedy algorithm and another Orthogonal Multiple Access (OMA) solution in minimizing the mission completion time.

Ruixuan Han↗

The augmentation algorithm and molecular phylogenetic trees

Moore's (1977) augmentation procedure is discussed, and it is concluded that the procedure is valid for obtaining estimates of the total number of fixed nucleotide substitutions both theoretically and in practice, for both simulated and real data, and in agreement, for experimentally dense data sets, with stochastic estimates of the divergence, provided the restrictions on codon mutability resulting from natural selection are explicitly allowed for. Tateno and Nei's (1978) critique that the augmentation procedure has a systematic bias toward overestimation of the total number of nucleotide replacements is disputed, and a data analysis suggests that ancestral sequences inferred by the method of parsimony contain a large number of incorrectly assigned nucleotides.

Holmquist, R.↗

A procedure used for a ground truth study of a land use map of North Alabama generated from LANDSAT data

A land use map of a five county area in North Alabama was generated from LANDSAT data using a supervised classification algorithm. There was good overall agreement between the land use designated and known conditions, but there were also obvious discrepancies. In ground checking the map, two types of errors were encountered - shift and misclassification - and a method was developed to eliminate or greatly reduce the errors. Randomly selected study areas containing 2,525 pixels were analyzed. Overall, 76.3 percent of the pixels were correctly classified. A contingency coefficient of correlation was calculated to be 0.7 which is significant at the alpha = 0.01 level. The land use maps generated by computers from LANDSAT data are useful for overall land use by regional agencies. However, care must be used when making detailed analysis of small areas. The procedure used for conducting the ground truth study together with data from representative study areas is presented.

Downs, S. W., Jr.↗

Time scheduling of a mix of 4D equipped and unequipped aircraft

In planning for a future automated air traffic system, it is necessary to confront the transition situation in which some percentage of the traffic must be handled by conventional means. A safe, efficient transition system is needed since initially not all aircraft will be able to respond to a more automated system. The specific problem addressed was that of time scheduling a mix of 4D-equipped aircraft (aircraft that can accurately meet a controller specified time schedule at selected way points in the terminal area) when operating in conjunction with unequipped aircraft (aircraft that require air traffic handling by means of standard vectoring techniques). First, a relationship between time separation and system capacity was developed. The time separations were incorporated into a set of scheduling algorithms which contain the required elements of flexibility needed for terminal-area operation, such as delaying aircraft and changing time separations. The problem of reducing the size of time separations allotted for vectored aircraft by means of computer assists to the controller was also addressed.

Tobias, L.↗