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The history of invention and development of Zeeman laser gyroscopes, specific features of their optical scheme and operation principle are described. The construction and element base of modern laser angular velocity sensors with Zeeman-based frequency biasing are considered. The problems and prospects of their development are discussed. (laser gyroscopes)
The objective of this work is to develop error-bounded lossy compression methods to preserve topological features in 2D and 3D vector fields. Specifically, we explore the preservation of critical points in piecewise linear vector fields. We define the preservation of critical points as, without any false positive, false negative, or false type change in the decompressed data, (1) keeping each critical point in its original cell and (2) retaining the type of each critical point (e.g., saddle and attracting node). The key to our method is to adapt a vertex-wise error bound for each grid point and to compress input data together with the error bound field using a modified lossy compressor. Our compression algorithm can be also embarrassingly parallelized for large data handling and in situ processing. We benchmark our method by comparing it with existing lossy compressors in terms of false positive/negative/type rates, compression ratio, and various vector field visualizations with several scientific applications.
The problem of obtaining an optimal or near optimal schedule for scientific experiments to be performed on Spacelab missions is addressed. The current capabilities in this regard are examined and a method of ranking experiments in order of difficulty is developed to support the existing software. Experimental data is obtained from applying this method to the sets of experiments corresponding to Spacelab mission 1, 2, and 3. Finally, suggestions are made concerning desirable modifications and features of second generation software being developed for this problem.
Background. The availability of large complex data sets generated by high throughput technologies has enabled the recent proliferation of disease biomarker studies. However, a recurring problem in deriving biological information from large data sets is how to best incorporate expert knowledge into the biomarker selection process. Objective. To develop a generalizable framework that can incorporate expert knowledge into data-driven processes in a semiautomated way while providing a metric for optimization in a biomarker selection scheme. Methods. The framework was implemented as a pipeline consisting of five components for the identification of signatures from integrated clustering (ISIC). Expert knowledge was integrated into the biomarker identification process using the combination of two distinct approaches; a distance-based clustering approach and an expert knowledge-driven functional selection. Results. The utility of the developed framework ISIC was demonstrated on proteomics data from a study of chronic obstructive pulmonary disease (COPD). Biomarker candidates were identified in a mouse model using ISIC and validated in a study of a human cohort. Conclusions. Expert knowledge can be introduced into a biomarker discovery process in different ways to enhance the robustness of selected marker candidates. Developing strategies for extracting orthogonal and robust features from large data sets increases the chances of success in biomarker identification.
Tyrannosaurus rex and other tyrannosaurid dinosaurs were apex predators during the latest Cretaceous, which combined giant size and advanced neurosensory systems. Computed tomography (CT) data have shown that tyrannosaurids had a trademark system of a large brain, large olfactory bulbs, elongate cochlear ducts, and expansive endocranial sinuses surrounding the brain and sense organs. Older, smaller tyrannosauroid relatives of tyrannosaurids developed some, but not all, of these features, raising the hypothesis that tyrannosaurid-style brains evolved before the enlarged tyrannosaurid-style sinuses, which might have developed only with large body size. This has been difficult to test, however, because little is known about the brains and sinuses of the first large-bodied tyrannosauroids, which evolved prior to Tyrannosauridae. Here we present the first CT data for one of these species, Bistahieversor sealeyi from New Mexico. Bistahieversor had a nearly identical brain and sinus system as tyrannosaurids like Tyrannosaurus, including a large brain, large olfactory bulbs, reduced cerebral hemispheres, and optic lobes, a small tab-like flocculus, long and straight cochlear ducts, and voluminous sinuses that include a supraocciptal recess, subcondyar sinus, and an anterior tympanic recess that exits the braincase via a prootic fossa. When characters are plotted onto tyrannosauroid phylogeny, there is a two-stage sequence in which features of the tyrannosaurid-style brain evolved first (in smaller, nontyrannosaurid species like Timurlengia), followed by features of the tyrannosaurid-style sinuses (in the first large-bodied nontyrannosaurid tyrannosauroids like Bistahieversor). This suggests that the signature tyrannosaurid sinus system evolved in concert with large size, whereas the brain did not.
Some routine supervisory functions performed automatically. Program Management Facility (PMF) computer program integrated software-development and control system. Applicable to large software systems involving as many as several hundred programmers and one million lines of codes, it ensures timely and orderly planning, development, implementation, and documentation of software. Designed as support tool. Has many features providing efficient processing and utilization of space for development programmer. Incorporates security system to prevent improper maintenance. Provides full set of cross-referenced reports and supervisory functions for detailed management information. Written in assembler. IBM program TSO required.
This year we are celebrating the 50th anniversary of the launch of the backscatter UV (BUV) instrument on NASA’s Nimbus-4 satellite. Since then 10 more advanced instruments, but based on the same basic measurement principle, have been launched on polar orbiting NASA and NOAA satellites. The datasets produced by these instruments are unique for they have captured the period before the onset of the decline of the ozone layer due to manmade chemicals, the declining period, and the present slow recovery period. This period includes the rapid development of the iconic anthropocene era feature called the “Ozone Hole” . However, stitching together data from 11 separate satellite instruments to create a homogeneous record has presented many challenges. The first two NASA instruments suffered considerable degradation after launch that required the development of novel techniques to characterize their calibration. The next 7 instruments were launched on NOAA’s polar orbiting weather satellites that were not designed for long-term monitoring of climate variables. In particular, they didn’t have the station keeping capabilities needed to maintain a stable equator crossing time. Drifting orbits not only stress the retrieval algorithm and the calibration system of UV instruments but also make the interpretation of data difficult because the upper stratospheric ozone has systematic and complex diurnal variabilities that are comparable to the anthropogenic signal one wants to extract. We will highlight our recent efforts in untangling this knot. Finally, we will discuss the results from the OMPS limb scattering instrument, a recent addition to this constellation, that has been operating on the Suomi NPP satellite since October 2011. It is helping us capture how the ozone layer in the lower stratosphere and troposphere is evolving in response to the climate change and rising chemical pollutants in some parts of the world, while the upper stratosphere slowly recovers due to phaseout of the chemicals that initiated the decline of the ozone layer in the late 70s.
This report presents results from the DOE-sponsored workshop titled, ``Advancing X-Cutting Ideas for Computational Climate Science Workshop,'' known as AXICCS, held on September 12--13, 2016 in Rockville, MD. The workshop brought together experts in climate science, computational climate science, computer science, and mathematics to discuss interesting but unsolved science questions regarding climate modeling and simulation, promoted collaboration among the diverse scientists in attendance, and brainstormed about possible tools and capabilities that could be developed to help address them. Emerged from discussions at the workshop were several research opportunities that the group felt could advance climate science significantly. These include (1) process-resolving models to provide insight into important processes and features of interest and inform the development of advanced physical parameterizations, (2) a community effort to develop and provide integrated model credibility, (3) including, organizing, and managing increasingly connected model components that increase model fidelity yet complexity, and (4) treating Earth system models as one interconnected organism without numerical or data based boundaries that limit interactions. The group also identified several cross-cutting advances in mathematics, computer science, and computational science that would be needed to enable one or more of these big ideas. It is critical to address the need for organized, verified, and optimized software, which enables the models to grow and continue to provide solutions in which the community can have confidence. Effectively utilizing the newest computer hardware enables simulation efficiency and the ability to handle output from increasingly complex and detailed models. This will be accomplished through hierarchical multiscale algorithms in tandem with new strategies for data handling, analysis, and storage. These big ideas and cross-cutting technologies for enabling breakthrough climate simulation advancements also need the "glue" of outreach and learning across the scientific domains to be successful. The workshop identified several strategies to allow productive, continuous engagement across those who have a broad knowledge of the various angles of the problem. Specific ideas to foster education and tools to make material progress were discussed. Examples include follow-on cross-cutting meetings that enable unstructured discussions of the types this workshop fostered. A concerted effort to recruit undergraduate and graduate students from all relevant domains and provide them experience, training, and networking across their immediate expertise is needed. This will broaden and expand their exposure to the future needs and solutions, and provide a pipeline of scientists with a diversity of knowledge and know-how. Providing real-world experience with subject matter experts from multiple angles may also motivate the students to attack these problems and even come up with the missing solutions.
This report presents results from the DOE-sponsored workshop titled, Advancing X-Cutting Ideas for Computational Climate Science Workshop,'' known as AXICCS, held on September 12--13, 2016 in Rockville, MD. The workshop brought together experts in climate science, computational climate science, computer science, and mathematics to discuss interesting but unsolved science questions regarding climate modeling and simulation, promoted collaboration among the diverse scientists in attendance, and brainstormed about possible tools and capabilities that could be developed to help address them. Emerged from discussions at the workshop were several research opportunities that the group felt could advance climate science significantly. These include (1) process-resolving models to provide insight into important processes and features of interest and inform the development of advanced physical parameterizations, (2) a community effort to develop and provide integrated model credibility, (3) including, organizing, and managing increasingly connected model components that increase model fidelity yet complexity, and (4) treating Earth system models as one interconnected organism without numerical or data based boundaries that limit interactions. The group also identified several cross-cutting advances in mathematics, computer science, and computational science that would be needed to enable one or more of these big ideas. It is critical to address the need for organized, verified, and optimized software, which enables the models to grow and continue to provide solutions in which the community can have confidence. Effectively utilizing the newest computer hardware enables simulation efficiency and the ability to handle output from increasingly complex and detailed models. This will be accomplished through hierarchical multiscale algorithms in tandem with new strategies for data handling, analysis, and storage. These big ideas and cross-cutting technologies for enabling breakthrough climate simulation advancements also need the "glue" of outreach and learning across the scientific domains to be successful. The workshop identified several strategies to allow productive, continuous engagement across those who have a broad knowledge of the various angles of the problem. Specific ideas to foster education and tools to make material progress were discussed. Examples include follow-on cross-cutting meetings that enable unstructured discussions of the types this workshop fostered. A concerted effort to recruit undergraduate and graduate students from all relevant domains and provide them experience, training, and networking across their immediate expertise is needed. This will broaden and expand their exposure to the future needs and solutions, and provide a pipeline of scientists with a diversity of knowledge and know-how. Providing real-world experience with subject matter experts from multiple angles may also motivate the students to attack these problems and even come up with the missing solutions.
With the rise of electronic and high-dimensional data, new and innovative feature detection and statistical methods are required to perform accurate and meaningful statistical analysis of these datasets that provide unique statistical challenges. In the area of feature detection, much of the recent feature detection research in the computer vision community has focused on deep learning methods, which require large amounts of labeled training data. However, in many application areas, training data is very limited and often difficult to obtain. We develop methods for fast, unsupervised, precise feature detection for video data based on optical flows, edge detection, and clustering methods. We also use pretrained neural networks and interpretable linear models to extract features using very limited training data. In the area of statistics, while high-dimensional data analysis has been a main focus of recent statistical methodological research, much focus has been on populations of high-dimensional vectors, rather than populations of high-dimensional tensors, which are three-dimensional arrays that can be used to model dependent images, such as images taken of the same person or ripped video frames. Our feature detection method is a non-model-based method that fusses information from dense optical flow, raw image pixels, and frame differences to generate detections. Our hypothesis testing methods are based on the assumption that dependent images are concatenated into a tensor that follows a tensor normal distribution, and from this assumption, we derive likelihood-ratio, score, and regression-based tests for one- and multiple-sample testing problems. Our methods will be illustrated on simulated and real datasets. We conclude this report with comments on the relationship between feature detection and hypothesis testing methods.
The software lifecycle is a well researched topic that has produced many models to meet the needs of different types of software projects. However, one class of projects, software development for scientific computing, has received relatively little attention from lifecycle researchers. In particular, software for end-to-end computations for obtaining scientific results has received few lifecycle proposals and no formalization of a development model. An examination of development approaches employed by the teams implementing large multicomponent codes reveals a great deal of similarity in their strategies. This idea paper formalizes these related approaches into a lifecycle model for end-to-end scientific application software, featuring loose coupling between submodels for development of infrastructure and scientific capability. We also invite input from stakeholders to converge on a model that captures the complexity of this development processes and provides needed lifecycle guidance to the scientific software community.
Features of the semiplanotron surface plasma sources (SPS) with cesiation used for high efficient negative ion beam production from first development to modern condition are considered. Design features of semiplanotrons SPS with cylindrical and spherical geometric focusing and the features of the negative ion production in the semiplanotrons are reviewed. Several versions of semiplanotrons with efficiency up to 0.1 A of H{sup -} per kW of discharge power are discussed. Modifications of the semiplanotrons for dc operation and for heavy negative ion production are reviewed.
NASA's Short-term Prediction, Research, and Transition (SPoRT) Center uses a wide array of satellites to monitor and assess the impacts of natural disasters, with support from NASA's Applied Sciences Program. One of the newest sensors SPoRT is utilizing in these activities is the International Space Station (ISS) SERVIR Environmental Research and Visualization System (ISERV) instrument. ISERV provides a unique view of the areas impacted and will play a big role in monitoring the recovery these areas. High‐resolution commercial satellite data is also used to monitor urban areas that have been impacted by natural disasters. SPoRT is developing techniques to measure the extent of these disasters and to monitor recovery. Several of these techniques include semi‐automatic feature detection and change as well as developing an experimental damage assessment based upon the visible damage observed by the satellites. Furthermore, throughout these activities SPoRT hopes to provide additional data to the NOAA National Weather Service Damage Assessment Toolkit, which will help to supplement those activities being performed in the field.
Shallow moist convection is ubiquitous throughout the tropics and represents a key player in boundary layer processes. Common tropical cloud features, such as convective rolls and cold pool fronts, form and persist for different periods within environments that support such development. Determining differences in lifecycle amongst these features in varying environments requires viewing their evolution from initiation to decay. Geostationary satellites provide a means to follow the clouds with enhanced spatiotemporal sampling from space. We apply a cloud-tracking tool to study lifecycle properties of shallow cumulus sampled during the NASA Cloud, Aerosol, and Monsoon Processes Philippines Experiment (CAMP2Ex) field campaign of 2019. The mission conducted airborne and shipborne operations over the West Pacific Ocean, in tandem with Rapid Scan imagery from the Advanced Himawari Imager (AHI) on the Japan Meteorological Agency’s (JMA) Himawari-8 satellite. Shallow cumulus was segmented on AHI 0.5-km visible reflectance and tracked during the daylit hours of several research flights that exhibited ideal atmospheric conditions for tracking. The resulting cloud tracks were collected according to regions containing airborne sampling of individual clouds at various stages of their lifecycles, yielding ensembles of tracks in separate environments. We present an analysis on lifecycle properties extracted from the cloud-track ensembles and their potential connections to cloud organizations observed throughout CAMP2Ex. Each ensemble is evaluated by calculating cloud-layer growth rates and comparing to spatial parameters, including track-achieved area and cloud-top height. The apparent clustering of growth rates for specific ensembles is then compared against overall cloud organizations, such as isolated congestus and cold pool fronts, that are observed with the airborne data. Finally, we consider how such differences in cloud growth appear in the airborne radar observations of intercepted cloud tracks.
Celestial Mapping System (CMS) is a software platform to generate virtual 3D globe for celestial bodies within our solar system. Various layers are built on top of the virtual globe to provide visualization of high resolution imagery, enable precise measurements, build analytical capabilities and broad range of functionalities to assist planetary scientists and mission planners. CMS is built using OpenJDK 11 and will run on a wide variety of platforms such as Linux, Windows, OSX, etc. It has a thick client with less overhead to access hardware resources. This allows features such as terrain profiling and distance calculations to be performed on the client and on the fly. The present focus of CMS is on developing lunar mapping tool kits to provide features such as - 3D first person view with zoom and navigational capabilities, realistic terrain visualization based on LRO data, measurement tools, Apollo landing site annotations, stereoscopic view, elevation profiles, line of sight analysis and many more. The application is developed to provide situational and domain awareness on Lunar surface, planning capabilities for equipment placements and traverse path optimization. As data becomes available, CMS has the capabilities to integrate data sets that change dynamically in real-time, which will be useful for monitoring satellites and remotely-sensed data on Lunar surface. CMS utilizes NASA WorldWind Java library and OpenGL to achieve high-performance rendering of data and measurements, and also adheres to OGC standards. CMS supports importing synthetic features in a variety of 3D, 2D, vector and raster formats. Nomenclature is pulled from USGS Moon IAU2000 database, and lunar parameters are based of the standardized IAU2000 Moon ellipsoid. GDAL (Geospatial Data Abstraction Library) was used to modify and test the accuracy of datasets before integrating into the application. Our high-resolution global elevation model was compared with the LRO LOLA DEM elevation values and tested to ensure accuracy. Celestial Mapping System has several potential use cases for NASA including subsurface lava tubes visualization and analysis, soil analysis, resource visualization and representation on 3D globe.
Applications of the severe accident analysis code MELCOR, developed for the U.S. Nuclear Regulatory Commission (NRC) by Sandia National Laboratories (SNL), have been supported by the graphical user-interface and post-processing suite Symbolic Nuclear Analysis Package (SNAP), developed for the NRC by Applied Programming Technology (APT). With the release of MELCOR 2.2, new user functionality and models have been introduced and an update to the SNAP MELCOR plugin user interface is necessary to access these new features. This document relates all new features introduced into MELCOR to the development team at APT as well as the NRC.
The development of immunological therapies that incorporate peptide antigens presented to T cells by MHC proteins is a long sought-after goal, particularly for cancer, where mutated neoantigens are being explored as personalized cancer vaccines. Although neoantigens can be identified through sequencing, bioinformatics and mass spectrometry, identifying those which are immunogenic and able to promote tumor rejection remains a significant challenge. Here we examined the potential of high-resolution structural modeling followed by energetic scoring of structural features for predicting neoantigen immunogenicity. After developing a strategy to rapidly and accurately model nonameric peptides bound to the common class I MHC protein HLA-A2, we trained a neural network on structural features that influence T cell receptor (TCR) and peptide binding energies. The resulting structurally-parameterized neural network outperformed methods that do not incorporate explicit structural or energetic properties in predicting CD8 + T cell responses of HLA-A2 presented nonameric peptides, while also providing insight into the underlying structural and biophysical mechanisms governing immunogenicity. Our proof-of-concept study demonstrates the potential for structure-based immunogenicity predictions in the development of personalized peptide-based vaccines.
Electrical vehicles (EVs) are an attractive option for moving towards a CO 2 neutral transportation sector, but in order for widespread commercial use of EVs, the cost of electrical energy storage (i.e., batteries) must be reduced and the energy storage capacity must be increased. New, higher performing but Earth abundant electrodes are needed to accomplish this goal. To aid the development of these materials, in situ characterization to understand battery operation and failure is essential. Since electrodes are inherently heterogeneous, with a range of relevant length scales, imaging is a necessary component of the suite of characterization methods. In this Feature Article, the rapidly growing and developing field of X‐ray based microscopy (XM) techniques is described and reviewed focusing on in situ and operando adaptations. Further, in situ transmission electron microscopy (TEM) is briefly discussed in this context and its complement to XM is emphasized. Finally, a perspective is given on some emerging X‐ray based imaging approaches for energy storage materials.