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Modeling Ultraviolet Emissions Near Io

In this report, we describe work awarded to Science Applications International Corporation, for the period 6/l/99 to 5/31/00. During this time period, we have investigated the interaction of Io, Jupiter's innermost Galilean satellite, with the Io plasma torus, and the role this interaction plays in producing ultraviolet (UV) emissions from neutral oxygen and sulfur. Io, the innermost of Jupiter's Galilean satellites, plays a unique role in the jovian magnetosphere. Neutral material that escapes from Io is ionized to form the lo torus, a dense, heavy-ion plasma that corotates with Jupiter and interacts with Io. Io supplies not only the torus, but is a major source of plasma for the entire magnetosphere. Ionization and charge-exchange of neutrals near lo strongly influences the plasma interaction, and Io's neutral atmosphere plays an important role in the generation of currents that couple Io to Jupiter. There have been no in situ measurements of the neutral density near Io, but remote observations of neutrals near lo have been performed for many years. Recent observations from the Hubble Space Telescope (HST) have shown detailed structure in UV emissions from neutral species near Io. Electron-impact of the neutrals by the Io torus plasma is the primary mechanism responsible for exciting these emissions. Previously, we have modeled the Io plasma environment using three-dimensional magnetohydrodynamic (MHD) simulations, and we have shown that the interaction between Io and the plasma torus plays an important role in producing the morphology of the observed emissions. In the past year, we have extended these studies to use both UV observations and Galileo particle and field measurements to investigate the Io interaction.

Linker, Jon A.↗

Integrating Upper Class E Traffic Management (ETM) Operations into the National Airspace System: Use Cases and Research Questions

As new categories of vehicles are introduced in the National Airspace System, so too are novel concepts for a cooperative approach to traffic management environments. One of these new environments, Upper Class E Traffic Management (ETM), is expected to include a variety of high altitude, long endurance vehicles with a range of performance capabilities and mission profiles that operate in cooperative areas above 60,000 feet. In addition to developing the rules, architecture, and systems for operations within the ETM environment itself, it is also important to consider how ETM vehicles will integrate with traditional Air Traffic Management and interact with Air Traffic Control (ATC) as they traverse ATC-controlled airspace and transition in and out of cooperative ETM operating areas. As a first step toward future ETM demonstrations at the National Aeronautics and Space Administration (NASA) Ames Research Center’s Airspace Operations Laboratory, use cases with step-by-step procedures were developed to identify both nominal and off-nominal scenarios in which ETM operations will interact with ATC. As NASA prepares to develop a simulation platform to demonstrate ETM cooperative practices and ETM-ATC interactions, the procedures, ATC roles and responsibilities, data exchange requirements, and research questions that were identified as part of use case development will inform scenario and system architecture design. The upcoming simulation work will include initial prototype ETM-ATC coordination tools to support ATC controllers’ interactions with ETM operations. This paper will briefly discuss NASA’s upcoming ETM development work and then provide background on ETM-ATC interactions, describe each ETM-ATC interaction use case, and discuss open questions on concept, procedures, and assumptions.

ATC↗

Integrating Upper Class E Traffic Management (ETM) Operations into the National Airspace System: Use Cases and Research Questions

As new categories of vehicles are introduced in the National Airspace System, so too are novel concepts for a cooperative approach to traffic management environments. One of these new environments, Upper Class E Traffic Management (ETM), is expected to include a variety of high altitude, long endurance vehicles with a range of performance capabilities and mission profiles that operate in cooperative areas above 60,000 feet. In addition to developing the rules, architecture, and systems for operations within the ETM environment itself, it is also important to consider how ETM vehicles will integrate with traditional Air Traffic Management and interact with Air Traffic Control (ATC) as they traverse ATC-controlled airspace and transition in and out of cooperative ETM operating areas. As a first step toward future ETM demonstrations at the National Aeronautics and Space Administration (NASA) Ames Research Center’s Airspace Operations Laboratory, use cases with step-by-step procedures were developed to identify both nominal and off-nominal scenarios in which ETM operations will interact with ATC. As NASA prepares to develop a simulation platform to demonstrate ETM cooperative practices and ETM-ATC interactions, the procedures, ATC roles and responsibilities, data exchange requirements, and research questions that were identified as part of use case development will inform scenario and system architecture design. The upcoming simulation work will include initial prototype ETM-ATC coordination tools to support ATC controllers’ interactions with ETM operations. This paper will briefly discuss NASA’s upcoming ETM development work and then provide background on ETM-ATC interactions, describe each ETM-ATC interaction use case, and discuss open questions on concept, procedures, and assumptions.

ATC↗

Application of Recursive Estimation to Heat Tracing for Groundwater/Surface‐Water Exchange

Abstract We present and demonstrate a recursive‐estimation framework to infer groundwater/surface‐water exchange based on temperature time series collected at different vertical depths below the sediment/water interface. We formulate the heat‐transport problem as a state‐space model (SSM), in which the spatial derivatives in the convection/conduction equation are approximated using finite differences. The SSM is calibrated to estimate time‐varying specific discharge using the Extended Kalman Filter (EKF) and Extended Rauch‐Tung‐Striebel Smoother (ERTSS). Whereas the EKF is suited to real‐time (“online”) applications and uses only the past and current measurements for estimation (filtering), the ERTSS is intended for near‐real time or batch‐processing (“offline”) applications and uses a window of data for batch estimation (smoothing). The two algorithms are demonstrated with synthetic and field‐experimental data and are shown to be efficient and rapid for the estimation of time‐varying flux over seasonal periods; further, the recursive approaches are effective in the presence of rapidly changing flux and (or) nonperiodic thermal boundary conditions, both of which are problematic for existing approaches to heat tracing of time‐varying groundwater/surface‐water exchange.

54 ENVIRONMENTAL SCIENCES↗

Prospects of Detecting Nonthermal Protons in Solar Flares via Lyman Line Spectroscopy: Revisiting the Orrall-Zirker Effect

Solar flares are efficient particle accelerators, with a substantial fraction of the energy released manifesting as nonthermal particles. While the role that nonthermal electrons play in transporting flare energy is well studied, the properties and importance of nonthermal protons are rather less well understood. This is in large part due to the paucity of diagnostics, particularly at the lower-energy (deka-keV) range of nonthermal proton distributions in flares. One means to identify the presence of deka-keV protons is by an effect originally described by Orrall & Zirker. In the Orrall–Zirker effect, nonthermal protons interact with ambient neutral hydrogen, and via charge exchange produce a population of energetic neutral atoms (ENAs) in the chromosphere. These ENAs subsequently produce an extremely redshifted photon in the red wings of hydrogen spectral lines. We revisit predictions of the strength of this effect using modern interaction cross sections, and numerical models capable of self-consistently simulating the flaring nonequilibrium ionization stratification, and the nonthermal proton distribution (and, crucially, their feedback on each other). We synthesize both the thermal and nonthermal emission from Ly α and Ly β, the most promising lines that may exhibit a detectable signal. These new predictions are weaker and more transient than prior estimates, but the effects should be detectable in fortuitous circumstances. We degrade the Ly β emission to the resolution of the Spectral Imaging of the Coronal Environment (SPICE) instrument on board Solar Orbiter, demonstrating that though likely difficult, it should be possible to detect the presence of nonthermal protons in flares observed by SPICE.

Solar flares↗

Discovery of Aminopiperidine Indoles That Activate the Guanine Nucleotide Exchange Factor SOS1 and Modulate RAS Signaling

Deregulated RAS activity, often the result of mutation, is implicated in approximately 30% of all human cancers. Despite this statistic, no clinically successful treatment for RAS-driven tumors has yet been developed. One approach for modulating RAS activity is to target and affect the activity of proteins that interact with RAS, such as the guanine nucleotide exchange factor (GEF) son of sevenless homologue 1 (SOS1). In this paper, we report on structure–activity relationships (SAR) in an indole series of compounds. Using structure-based design, we systematically explored substitution patterns on the indole nucleus, the pendant amino acid moiety, and the linker unit that connects these two fragments. Best-in-class compounds activate the nucleotide exchange process at submicromolar concentrations in vitro, increase levels of active RAS–GTP in HeLa cells, and elicit signaling changes in the mitogen-activated protein kinase–extracellular regulated kinase (MAPK–ERK) pathway, resulting in a decrease in pERK1/2 T202/Y204 protein levels at higher compound concentrations.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Metabolic capability and in situ activity of microorganisms in an oil reservoir

Background: Microorganisms have long been associated with oxic and anoxic degradation of hydrocarbons in oil reservoirs and oil production facilities. While we can readily determine the abundance of microorganisms in the reservoir and study their activity in the laboratory, it has been challenging to resolve what microbes are actively participating in crude oil degradation in situ and to gain insight into what metabolic pathways they deploy. Results: Here, we describe the metabolic potential and in situ activity of microbial communities obtained from the Jiangsu Oil Reservoir (China) by an integrated metagenomics and metatranscriptomics approach. Almost complete genome sequences obtained by differential binning highlight the distinct capability of different community members to degrade hydrocarbons under oxic or anoxic condition. Transcriptomic data delineate active members of the community and give insights that Acinetobacter species completely oxidize alkanes into carbon dioxide with the involvement of oxygen, and Archaeoglobus species mainly ferment alkanes to generate acetate which could be consumed by Methanosaeta species. Furthermore, nutritional requirements based on amino acid and vitamin auxotrophies suggest a complex network of interactions and dependencies among active community members that go beyond classical syntrophic exchanges; this network defines community composition and microbial ecology in oil reservoirs undergoing secondary recovery. Conclusion: Our data expand current knowledge of the metabolic potential and role in hydrocarbon metabolism of individual members of thermophilic microbial communities from an oil reservoir. The study also reveals potential metabolic exchanges based on vitamin and amino acid auxotrophies indicating the presence of complex network of interactions between microbial taxa within the community.

59 BASIC BIOLOGICAL SCIENCES↗

Radiative flux measurements in the stratosphere

The objective is to determine how the stratospheric tropospheric exchange of water vapor is affected by the interaction of solar (visible) and planetary (infrared) radiation with tropical cumulonimbus anvils. This research involves field measurements from the ER-2 aircraft as well as radiative transfer modelling to determine heating and cooling rates and profiles that directly affect the exchange between the troposphere and the stratosphere.

Valero, Francisco P. J.↗

Spin-crossover complexes: Self-interaction correction vs density correction

Complexes containing a transition metal atom with a 3d 4 –3d 7 electron configuration typically have two low-lying, high-spin (HS) and low-spin (LS) states. The adiabatic energy difference between these states, known as the spin-crossover energy, is small enough to pose a challenge even for electronic structure methods that are well known for their accuracy and reliability. In this work, we analyze the quality of electronic structure approximations for spin-crossover energies of iron complexes with four different ligands by comparing energies from self-consistent and post-self-consistent calculations for methods based on the random phase approximation and the Fermi–Löwdin self-interaction correction. Considering that Hartree–Fock densities were found by Song et al., J. Chem. Theory Comput. 14, 2304 (2018), to eliminate the density error to a large extent, and that the Hartree–Fock method and the Perdew–Zunger-type self-interaction correction share some physics, we compare the densities obtained with these methods to learn their resemblance. Here, we find that evaluating non-empirical exchange-correlation energy functionals on the corresponding self-interaction-corrected densities can mitigate the strong density errors and improves the accuracy of the adiabatic energy differences between HS and LS states.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Hidden Interface Driven Exchange Coupling in Oxide Heterostructures

A variety of emergent phenomena have been enabled by interface engineering in complex oxides. The existence of an intrinsic interfacial layer has often been found at oxide heterointerfaces. However, the role of such an interlayerin controlling functionalities is not fully explored. Here, we report the control of the exchange bias (EB) in single-phase manganite thin films with nominallyuniform chemical composition across the interfaces. The sign of EB depends on the magnitude of the cooling field. A pinned layer, confirmed by polarized neutron reflectometry, provides the source of unidirectional anisotropy. The origin of the exchange bias coupling is discussed in terms of magnetic interactions between the interfacial ferromagnetically reduced layer and the bulk ferromagnetic region. The sign of EB is related to the frustration of antiferromagnetic coupling between the ferromagnetic region and the pinned layer. Our results shed new light on using oxide interfaces to design functional spintronic devices.

epitaxial thin films↗

Application of Core Dynamics Modeling to Core-Mantle Interactions

Observations have demonstrated that length of day (LOD) variation on decadal time scales results from exchange of axial angular momentum between the solid mantle and the core. There are in general four core-mantle interaction mechanisms that couple the core and the mantle. Of which, three have been suggested likely the dominant coupling mechanism for the decadal core-mantle angular momentum exchange, namely, gravitational core-mantle coupling arising from density anomalies in the mantle and in the core (including the inner core), the electromagnetic coupling arising from Lorentz force in the electrically conducting lower mantle (e.g. D-layer), and the topographic coupling arising from non-hydrostatic pressure acting on the core-mantle boundary (CMB) topography. In the past decades, most effort has been on estimating the coupling torques from surface geomagnetic observations (kinematic approach), which has provided insights on the core dynamical processes. In the meantime, it also creates questions and concerns on approximations in the studies that may invalidate the corresponding conclusions. The most serious problem is perhaps the approximations that are inconsistent with dynamical processes in the core, such as inconsistencies between the core surface flow beneath the CMB and the CMB topography, and that between the D-layer electric conductivity and the approximations on toroidal field at the CMB. These inconsistencies can only be addressed with numerical core dynamics modeling. In the past few years, we applied our MoSST (Modular, Scalable, Self-consistent and Three-dimensional) core dynamics model to study core-mantle interactions together with geodynamo simulation, aiming at assessing the effect of the dynamical inconsistencies in the kinematic studies on core-mantle coupling torques. We focus on topographic and electromagnetic core-mantle couplings and find that, for the topographic coupling, the consistency between the core flow and the CMB topography is critical for correct evaluation of the coupling torque.

Kuang, Weijia↗

Exometabolomic Analysis of Cross-Feeding Metabolites

Microbial consortia have the potential to perform complex, industrially important tasks. The design of microbial consortia requires knowledge of the substrate preferences and metabolic outputs of each member, to allow understanding of potential interactions such as competition and beneficial metabolic exchange. Here, we used exometabolite profiling to follow the resource processing by a microbial co-culture of two biotechnologically relevant microbes, the bacterial cellulose degrader Cellulomonas fimi , and the oleaginous yeast Yarrowia lipolytica . We characterized the substrate preferences of the two strains on compounds typically found in lignocellulose hydrolysates. This allowed prediction that specific sugars resulting from hemicellulose polysaccharide degradation by C. fimi may serve as a cross-feeding metabolites to Y. lipolytica in co-culture. We also showed that products of ionic liquid-treated switchgrass lignocellulose degradation by C. fimi were channeled to Y. lipolytica in a co-culture. Additionally, we observed metabolites, such as shikimic acid accumulating in the co-culture supernatants, suggesting the potential for producing interesting co-products. Insights gained from characterizing the exometabolite profiles of individual and co-cultures of the two strains can help to refine this interaction, and guide strategies for making this an industrially viable co-culture to produce valuable products from lignocellulose material.

59 BASIC BIOLOGICAL SCIENCES↗

Fermionic dark matter in a simple t-channel model

We consider a fermionic dark matter (DM) particle in renormalizable Standard Model (SM) gauge interactions in a simple t-channel model. The DM particle interactions with SM fermions is through the exchange of scalar and vector mediators which carry colour or lepton number. In the case of coloured mediators considered in this study, we find that if the DM is thermally produced and accounts for the observed relic density almost the entire parameter space is ruled out by the direct detection observations. The bounds from the monojet plus missing energy searches at the Large Hadron Collider are less stringent in this case. In contrast for the case of Majorana DM, we obtain strong bounds from the monojet searches which rule out DM particles of mass less than about a few hundred GeV for both the scalar and vector mediators.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Universal Utility Data Exchange (UUDEX) – Protocol Design - Rev 1

This design document describes protocol related aspects of Universal Utility Data Exchange (UUDEX). The focus of the design is to describe the interactions between UUDEX Clients and UUDEX Servers in the UUDEX Infrastructure. This design is purposely transport and programming language agnostic.

97 MATHEMATICS AND COMPUTING↗

Soil Organic Matter Stabilization by Polyvalent Cations in a Buried Alkaline Soil

Buried paleosols can store large quantities of organic carbon (C), much of which persists for millennia due to isolation from surface processes that promote decomposition. Subsoil organic matter (SOM) persistence is often enhanced by mineral associations and ionic conditions—particularly high clay content and polyvalent cations—that limit microbial degradation and leaching. However, the vulnerability of these deep C stocks under erosion or environmental change remains poorly understood. This study investigates controls on SOM stabilization in the Brady paleosol and overlying modern soils across contrasting geomorphic settings in the Great Plains of Nebraska where Late Quaternary loess deposition and erosion created a sequence of buried and exposed paleosols. We sampled soils along burial and erosional toposequences and analyzed their physicochemical properties and radiocarbon‐based persistence of occluded particulate organic matter (oPOM) and mineral fractions (MF). Brady paleosol showed greater persistence (lower Fm) of oPOM and MF than modern soils, particularly under burial. This was linked to higher silt and clay content, elevated electrical conductivity, and increased exchangeable calcium and magnesium content, supporting roles for organo‐mineral interactions, flocculation, and carbonate cementation. In modern soils, SOM persistence and C content were more strongly tied to pH and cation exchange capacity. Erosional exposure reduced SOM stability and promoted geochemical convergence toward modern surface soils. These findings show that burial enhances SOM persistence via multiple stabilization mechanisms, while erosion increases subsoil C vulnerability. Our results underscore the importance of geomorphic and geochemical context in predicting soil C stability under environmental change.

Environmental sciences↗

Quantifying uncertainties due to irreducible three-body forces in deuteron-nucleus reactions

Deuteron-induced nuclear reactions are an essential tool for probing the structure of nuclei as well as astrophysical information such as (n, γ) cross sections. The deuteron-nucleus system is typically described within a Faddeev three-body model consisting of a neutron (n), a proton (p), and the target nucleus (A) interacting through pairwise phenomenological potentials. While Faddeev techniques enable the exact description of the three-body dynamics, their predictive power is limited in part by the omission of irreducible neutron-proton-nucleus three-body force (n–p–A 3BF). Here, our goal is to quantify systematic uncertainties stemming from the reduction of deuteron-nucleus (d + A) dynamics to a picture of three pointlike nuclear clusters interacting via pairwise nucleon-nucleus forces, using as testing grounds d + α scattering and the 6 Li ground state. We particularly focus on quantifying uncertainties arising from the full antisymmetrization of the (A + 2)-body system with the target nucleus fixed in its ground state. We adopt the ab initio no-core shell model coupled with the resonating group method (NCSM/RGM) to compute microscopic n–α and p–α interactions, and use them in a three-body description of the d + α system by means of momentum-space Faddeev-type equations. Simultaneously, we also carry out ab initio calculations of d + α scattering and 6 Li ground state by means of six-body NCSM/RGM calculations to serve as a benchmark for the three-body model predictions given by the Faddeev calculations. By comparing the Faddeev and NCSM/RGM results, we show that the irreducible n–p–α 3BF has a non-negligible effect on bound state and scattering observables alike. Specifically, the Faddeev approach yields a 6 Li ground state that is approximately 600 keV shallower than the one obtained with the NCSM/RGM. Additionally, the Faddeev calculations for d + α scattering yield a 3 + resonance that is located approximately 400 keV higher in energy compared to the NCSM/RGM result. The shape of the d + α angular distributions computed using the two approaches also differ, owing to the discrepancy in the predictions of the 3 + resonance energy. The Faddeev three-body model predictions for d + α scattering and 6 Li using microscopic n–α and p–α potentials differ from those computed microscopically with the NCSM/RGM. These discrepancies are due to the n–p–α 3BF, which arises from two-nucleon exchange terms in the microscopic d–α interaction and are not accounted for in the three-body model Faddeev calculations. This study lays the foundation for future parametrizations of the 3BF due to Pauli exclusion principle effects in improved three-body calculations of deuteron-induced reactions.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Deuterium Exchange in the Systems of H2O+/H2O and H3O+/H2O

Using tandem mass spectrometry various water ion interactions were observed. These reactions consisted of a series of charge transfer, proton transfer, and isotopic exchange steps. The experimental data sets consist of variations of ion abundances over a neutral pressure range. An expected sequence of isotopic exchange reactions is given along with differential equation solutions & reaction rate data.

Spectroscopy Deuterium Proton Ion Atmospheric Scie↗

Pressure-Dependent Magnetic Properties of Quasi-2D Cr 2 Si 2 Te 6 and Mn 3 Si 2 Te 6

Recently, pressure has been used to induce structural and magnetic phase transitions in many layered quantum materials whose layers are linked by van der Waals forces. Materials with such weakly held layers allow for relatively easy manipulation of the superexchange mechanism, which can give rise to novel magnetic behavior. Here, using hydrostatic pressure as a disorderless means to manipulate the interlayer coupling, we applied pressure on two quasi-2D sister compounds, namely, Cr 2 Si 2 Te 6 (CST) and Mn 3 Si 2 Te 6 (MST), up to ~1 GPa. Magnetic property measurements with the application of pressure revealed that the ferromagnetic transition temperature decreases in CST, while the opposite occurs for the ferrimagnetic MST. In MST, magnetization decreases with the increase in pressure, and such a trend is not clearly observed within the pressure range studied for CST. The overall pressure effect on magnetic characteristics such as exchange couplings and magnetic anisotropy energies is also examined theoretically using density functional theory. Exchange coupling in MST is strongly frustrated, and the first nearest neighbor interaction is the most dominant of the components with the strongest pressure dependence. In CST, the exchange coupling parameters exhibit very little dependence on pressure. This combined experimental and theoretical work has the potential to expand to other relevant quantum materials.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗