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At least 127 records · Page 7

Controlled environment life support system: Calcium-related leaf injuries on plants

A calcium related injury in lettuce termed tipburn was the focus of this study. It affects the young developing leaves as they become enclosed during head formation. It is a good model system to study because the injury can be induced with good predictability and lettuce is one of the crops chosen by the CELSS program for concentrated study. Investigations were undertaken to study a number of different procedures, that would have the potential for encouraging movement of calcium into the young developing leaves and to study the time course and pattern of calcium accumulation in developing leaves to provide a basis for developing effective control procedures for this injury.

Tibbitts, T. W.↗

A Multidisciplinary Modeling Approach of Plant Gas Exchange in Reduced Gravity Environments

In-situ food production is a necessary step for human exploration of the solar system and requires a deep understanding of plant growth in reduced gravity environments. In particular, the lack of buoyancy-driven convection changes the gas exchange at the leaf surface, which decreases photosynthesis and transpiration rates, and ultimately biomass production. To understand the intricate relations between physical, chemical, and biochemical processes, the following methodology combines the development of a mechanistic model of plant growth in reduced gravity environments, computational fluid dynamics (CFD) simulations, and experiments in different time frames.The model presented here is a coupled mass and energy balance using the single round leaf assumption, including gravity as an entry parameter, and the leaf surface temperature as an output variable. Measures of the leaf surface temperature using infra-red cameras allow for a computation of the transpiration rate. This approach was followed to design a parabolic flight experiment, which performed 7 flights, and enabled data collection for model validation in different gravity and ventilation settings on a short time frame. Current measures of carbon assimilation and transpiration rate at the leaf and canopy level using an infra-red gas analyzer (Li-6800) in 1g lab conditions on several species will enable a validation on longer time frames and further calibration of the model. CFD studies both on the parabolic flight and on the lab experimental set-up allow the precise assessment of ventilation above the canopy and plants' leaves.Ultimately, this work will provide recommendations for the design of future plant growth hardware, especially on the lowest adequate ventilation for optimal plant growth in reduced gravity environments, as well as assessing biomass and oxygen production rates on planetary surfaces and space stations. This work was funded by CNES, CNRS, Clermont Auvergne Metropole, and NASA Space Biology through NASA postdoctoral program / USRA.

Poulet, Lucie↗

Abiotic Versus Biotic Pathogens: Replicative Growth in Host Tissues Key to Discriminating Between Biotoxic Injury and Active Pathogenesis

Life can be defined as a self-sustaining chemical system capable of undergoing Darwinian evolution; a self-bounded, self-replicating, and self-perpetuating entity [1]. This definition should hold for terrestrial as well as extraterrestrial life-forms. Although, it is reasonable to expect that a Mars life-form would be more adaptable to Mars-like conditions than to Earth-like environments, it remains possible that negative ecological or host interactions might occur if Mars microbiota were to be inadvertently released into the terrestrial environment. A biogenic infectious agent can be defined as a self-sustaining chemical system capable of undergoing Darwinian evolution and derives its sustenance from a living cell or from the by-products of cell death. Disease can be de-fined as the detrimental alteration of one or more ordered metabolic processes in a living host caused by the continued irritation of a primary causal factor or factors; disease is a dynamic process [2]. In contrast, an injury is due to an instantaneous event; injury is not a dynamic process [2]. A causal agent of disease is defined as a pathogen, and can be either abiotic or biotic in nature. Diseases incited by biotic pathogens are the exceptions, not the norms, in terrestrial host-microbe interactions. Disease induction in a plant host can be conceptually characterized using the Disease Triangle (Fig. 1) in which disease occurs only when all host, pathogen, and environ-mental factors that contribute to the development of disease are within conducive ranges for a necessary minimum period of time. For example, plant infection and disease caused by the wheat leaf rust fungus, Puccinia recondita, occur only if virulent spores adhere to genetically susceptible host tissues for at least 4-6 hours under favorable conditions of temperature and moisture [3]. As long as one or more conditions required for disease initiation are not available, disease symptoms will not develop.

Schuerger, Andrew C.↗

Is There Ecological Information in Optical Polarization Data?

Optical linear polarization? In remote sensing it's due to specular reflection. The first surface that incident light encounters - a smooth water surface or the waxy first surface of a leaf's cuticle, if it's even somewhat smooth (i.e. shiny) - will specularly reflect and linearly polarize the incident light. We provide three examples of the types of ecological information contained in remotely sensed optical linear polarization measurements. Remove the surface reflection to better see the interior. The linearly polarized light reflected by leaf surfaces contains no information about cellular pigments, metabolites, or water contained in the leaf interiors of a plant canopy, because it never enters the leaf interior to interact with them. Thus, for purposes of remotely sensing the leaf interiors of a plant canopy, the linearly polarized light should be subtracted from the total reflected light, because including it would add noise to the measurement. In particular 'minus specular' vegetation indices should allow improved monitoring of a plant canopy's physiological processes. Estimate plant development stage and yield. Wheat and sorghum grain heads, following emergence, rapidly extend upward and very quickly tower over nearby leaves, partially blocking our view of the sunlight reflected by those leaf surfaces. The resulting decrease in the amount of surface reflected and polarized sunlight, if monitored over time, potentially allows per-field estimates of the dates of the heading and flowering development stages to be interleaved with weather data in models, which is key to better estimating per-field grain yield. Similar polarization changes may occur in other grasses, such as oats, barley, corn and rice, each a crop so widely grown that it potentially affects climate at the regional scale. Wetlands Mapping. The sunlight specularly reflected by surface waters is blindingly bright, spectrally flat and polarized - all of which telegraphs that the ground area is inundated. Inundated soils exchange methane with the atmosphere; non-inundated soils, carbon dioxide. Aquatic plants growing through the water surface pipe the soil-produced methane via the stomata to the atmosphere, enhancing exchanges rates by factors of 10-20 compared to ebullition (bubbling) or diffusion through the water column to the atmosphere. Thus, mapping wetland areas into three community types - inundated areas with emergent vegetation, open water and uplands - provides potentially key information to water, carbon and energy budgets at landscape to global scales.

Water↗

ADP-glucose pyrophosphorylase is localized to both the cytoplasm and plastids in developing pericarp of tomato fruit

The intracellular location of ADP-glucose pyrophosphorylase (AGP) in developing pericarp of tomato (Lycopersicon esculentum Mill) has been investigated by immunolocalization. With the use of a highly specific anti-tomato fruit AGP antibody, the enzyme was localized in cytoplasm as well as plastids at both the light and electron microscope levels. The immunogold particles in plastids were localized in the stroma and at the surface of the starch granule, whereas those in the cytoplasm occurred in cluster-like patterns. Contrary to the fruit, the labeling in tomato leaf cells occurred exclusively in the chloroplasts. These data demonstrate that AGP is localized to both the cytoplasm and plastids in developing pericarp cells of tomato.

Non-NASA Center↗

Sensitivity of June Near-Surface Temperatures and Precipitation in the Eastern United States to Historical Land Cover Changes Since European Settlement

Land cover changes alter the near surface weather and climate. Changes in land surface properties such as albedo, roughness length, stomatal resistance, and leaf area index alter the surface energy balance, leading to differences in near surface temperatures. This study utilized a newly developed land cover data set for the eastern United States to examine the influence of historical land cover change on June temperatures and precipitation. The new data set contains representations of the land cover and associated biophysical parameters for 1650, 1850, 1920, and 1992, capturing the clearing of the forest and the expansion of agriculture over the eastern United States from 1650 to the early twentieth century and the subsequent forest regrowth. The data set also includes the inferred distribution of potentially water-saturated soils at each time slice for use in the sensitivity tests. The Regional Atmospheric Modeling System, equipped with the Land Ecosystem-Atmosphere Feedback (LEAF-2) land surface parameterization, was used to simulate the weather of June 1996 using the 1992, 1920, 1850, and 1650 land cover representations. The results suggest that changes in surface roughness and stomatal resistance have caused present-day maximum and minimum temperatures in the eastern United States to warm by about 0.3 C and 0.4 C, respectively, when compared to values in 1650. In contrast, the maximum temperatures have remained about the same, while the minimums have cooled by about 0.1 C when compared to 1920. Little change in precipitation was found.

Strack, John E.↗

Variability of Phenology and Fluxes of Water and Carbon with Observed and Simulated Soil Moisture in the Ent Terrestrial Biosphere Model (Ent TBM Version 1.0.1.0.0)

The Ent Terrestrial Biosphere Model (Ent TBM) is a mixed-canopy dynamic global vegetation model developed specifically for coupling with land surface hydrology and general circulation models (GCMs). This study describes the leaf phenology submodel implemented in the Ent TBM version 1.0.1.0.0 coupled to the carbon allocation scheme of the Ecosystem Demography (ED) model. The phenology submodel adopts a combination of responses to temperature (growing degree days and frost hardening), soil moisture (linearity of stress with relative saturation) and radiation (light length). Growth of leaves, sapwood, fine roots, stem wood and coarse roots is updated on a daily basis. We evaluate the performance in reproducing observed leaf seasonal growth as well as water and carbon fluxes for four plant functional types at five Fluxnet sites, with both observed and prognostic hydrology, and observed and prognostic seasonal leaf area index. The phenology submodel is able to capture the timing and magnitude of leaf-out and senescence for temperate broadleaf deciduous forest (Harvard Forest and Morgan- Monroe State Forest, US), C3 annual grassland (Vaira Ranch, US) and California oak savanna (Tonzi Ranch, US). For evergreen needleleaf forest (Hyytiäla, Finland), the phenology submodel captures the effect of frost hardening of photosynthetic capacity on seasonal fluxes and leaf area. We address the importance of customizing parameter sets of vegetation soil moisture stress response to the particular land surface hydrology scheme. We identify model deficiencies that reveal important dynamics and parameter needs.

Soil moisture↗

Effect of Elevated Atmospheric CO2 and Temperature on Leaf Optical Properties and Chlorophyll Content in Acer saccharum (Marsh.)

Elevated atmospheric CO2 pressure and numerous causes of plant stress often result in decreased leaf chlorophyll contents and thus would be expected to alter leaf optical properties. Hypotheses that elevated carbon dioxide pressure and air temperature would alter leaf optical properties were tested for sugar maple (Acer saccharum Marsh.) in the middle of its fourth growing season under treatment. The saplings had been growing since 1994 in open-top chambers at Oak Ridge, Tennessee under the following treatments: 1) Ambient CO2 pressure and air temperature (control); 2) CO2 pressure approximately 30 Pa above ambient; 3) Air temperatures 3 C above ambient; 4) Elevated CO2 and air temperature. Spectral reflectance, transmittance, and absorptance in the visible spectrum (400-720 nm) did not change significantly (rho = 0.05) in response to any treatment compared with control values. Although reflectance, transmittance, and absorptance at 700 nm correlated strongly with leaf chlorophyll content, chlorophyll content was not altered significantly by the treatments. The lack of treatment effects on pigmentation explained the non-significant change in optical properties in the visible spectrum. Optical properties in the near-infrared (721-850 nm) were similarly unresponsive to treatment with the exception of an increased absorptance in leaves that developed under elevated air temperature alone. This response could not be explained by the data, but might have resulted from effects of air temperature on leaf internal structure. Results indicated no significant potential for detecting leaf optical responses to elevated CO2 or temperature by the remote sensing of reflected radiation in the 400-850 nm spectrum.

Carter, Gregory A.↗

Phenology satellite experiment

The detection of a phenological event (the brown wave-vegetation senescence) for specific forest and crop types using ERTS-1 imagery is described. Data handling techniques included computer analysis and photo interpretation procedures. Computer analysis of ERTS-1 multispectral scanner digital tapes in all bands was used to give the relative changes of spectral reflectance with time of forests and specified crops. These data were obtained for a number of the study's twenty-four sites located within four north-south corridors across the United States. Analysis of ground observation photography and ERTS-1 imagery for sites in the Appalachian Corridor and Mississippi Valley Corridor indicates that the recession of vegetation development can be detected very well. Tentative conclusions are that specific phenological events such as crop maturity or leaf fall can be mapped for specific sites and possibly for entire regions.

Dethier, B. E.↗

Monitoring the environment by remote sensing

Structural features of ecosystems, such as leaf area index, phytomass and canopy chemical contents, are beginning to be estimated from remotely sensed data. This development, in combination with ecological modeling, is permitting the estimation of functional features of ecosystems including primary productivity and nutrient cycling. Such techniques are also being applied to the problem of monitoring the effects of air or water pollutants on biota. Sensors that obtain data at a coarse spatial scale (1 km2 or more) are also permitting the observation of biospheric patterns at a large regional or global scale for the first time. When coupled with atmospheric measurements, field data and simulation models, such data may serve to address ecological processes, including pollution effects, at large regional or global scales.

Westman, Walter E.↗

The Use of High Spectral Resolution Bands for Estimating Absorbed Photosynthetically Active Radiation (A Par)

Most remote sensing estimations of vegetation variables such as Leaf Area Index (LAI), Absorbed Photosynthetically Active Radiation (APAR), and phytomass are made using broad band sensors with a bandwidth of approximately 100 nm. However, high resolution spectrometers are available and have not been fully exploited for the purpose of improving estimates of vegetation variables. A study directed to investigate the use of high spectral resolution spectroscopy for remote sensing estimates of APAR in vegetation canopies in the presence of nonphotosynthetic background materials such as soil and leaf litter is presented. A high spectral resolution method defined as the Chlorophyll Absorption Ratio Index (CARI) was developed for minimizing the effects of nonphotosynthetic materials in the remote estimates of APAR. CARI utilizes three bands at 550, 670, and 700 nm with bandwidth of 10 nm. Simulated canopy reflectance of a range of LAI were generated with the SAIL model using measurements of 42 different soil types as canopy background. CARI obtained from the simulated canopy reflectance was compared with the broad band vegetation indices (Normalized Difference Vegetation Index (NDVI), Soil Adjusted Vegetation Index (SAVI), and Simple Ratio (SR)). CARI reduced the effect of nonphotosynthetic background materials in the assessment of vegetation canopy APAR more effectively than broad band vegetation indices.

Kim, Moon S.↗

W Photoprotection in Tropical Marine Organisms

Increasing levels of ultraviolet (UV) radiation reaching the earth's surface which results from stratospheric ozone depletions could have serious implications for terrestrial plants and for aquatic organisms within the euphotic zone. A documented 9% decline in ozone at mid-latitudes is considered to produce a 12% increase in harmful UV radiation. The biologically damaging effects of higher UV levels, particularly W-B (280-320 rim), could manifest earlier in the tropics because of the relative thinness of the earth's equatorial ozone layer. Tropical marine organisms are also living close to their upper tolerance levels of water temperature, However, despite the large potential effects on plants and animals, little is known about UV effects on tropical ecosystems. Long-term ecological studies are needed to quantify the effects of increased UV radiation on terrestrial and marine ecosystems and to produce reliable data for prediction. Plants have developed several mechanisms to protect themselves from harmful UV radiation, one of which is the production of secondary leaf pigments that absorb W-B radiation (screening pigments). A higher concentration of screening pigments (e.g. flavonoids) in leaves may be interpreted as a natural response to increased W radiation. If higher concentrations of flavonoids filter out the excessive W radiation, no damage will occur, as suggested by Caldwell et al. (1989) and Tevini (1993). Failure to screen all W-B may result in deleterious effects on photosynthesis, plant genetic material, and plant and leaf morphology and growth. Eventually this will have an impact on ecosystem processes, structure, species composition, and productivity. This paper describes an ongoing project that is assessing the responses of mangroves, seagrasses and corals to W radiation by studying pigment concentrations, biophysical parameters, and variations in spectral reflectance in the field and in W-reduction experiments. Preliminary results on the distribution of W-absorbing flavonoid compounds in red mangroves (Rhizophora mangle) and the seagrass Thalassia testudinum, are presented. This research also provides, for the first time, a permanent record of daily W irradiance measurements at a tropical -location.

Armstrong, Roy A.↗

Cellular localization of the Ca2+ binding TCH3 protein of Arabidopsis

TCH3 is an Arabidopsis touch (TCH) gene isolated as a result of its strong and rapid upregulation in response to mechanical stimuli, such as touch and wind. TCH3 encodes an unusual calcium ion-binding protein that is closely related to calmodulin but has the potential to bind six calcium ions. Here it is shown that TCH3 shows a restricted pattern of accumulation during Arabidopsis vegetative development. These data provide insight into the endogenous signals that may regulate TCH3 expression and the sites of TCH3 action. TCH3 is abundant in the shoot apical meristem, vascular tissue, the root columella and pericycle cells that give rise to lateral roots. In addition, TCH3 accumulation in cells of developing shoots and roots closely correlates with the process of cellular expansion. Following wind stimulation, TCH3 becomes more abundant in specific regions including the branchpoints of leaf primordia and stipules, pith parenchyma, and the vascular tissue. The consequences of TCH3 upregulation by wind are therefore spatially restricted and TCH3 may function at these sites to modify cell or tissue characteristics following mechanical stimulation. Because TCH3 accumulates specifically in cells and tissues that are thought to be under the influence of auxin, auxin levels may regulate TCH3 expression during development. TCH3 is upregulated in response to low levels of exogenous indole-3-acetic acid (IAA), but not by inactive auxin-related compounds. These results suggest that TCH3 protein may play roles in mediating physiological responses to auxin and mechanical environmental stimuli.

NASA Discipline Plant Biology↗

A 30+ Year AVHRR Land Surface Reflectance Climate Data Record and Its Application to Wheat Yield Monitoring

The Advanced Very High Resolution Radiometer (AVHRR) sensor provides a unique global remote sensing dataset that ranges from the 1980's to the present. Over the years, several efforts have been made on the calibration of the different instruments to establish a consistent land surface reflectance time-series and to augment the AVHRR data record with data from other sensors such as the Moderate Resolution Imaging Spectroradiometer (MODIS). In this paper, we present a summary of all the corrections applied to the AVHRR Surface Reflectance and NDVI Version 4 Product, developed in the framework of the National Oceanic and Atmospheric Administration (NOAA) Climate Data Record (CDR) program. These corrections result from assessment of the geo-location, improvement of the cloud masking and calibration monitoring. Additionally, we evaluate the performance of the surface reflectance over the AERONET sites by a cross-comparison with MODIS, which is an already validated product, and evaluation of a downstream Leaf Area Index (LAI) product. We demonstrate the utility of this long time-series by estimating the winter wheat yield over the USA. The methods developed by [1] and [2] are applied to both the MODIS and AVHRR data. Comparison of the results from both sensors during the MODIS-era shows the consistency of the dataset with similar errors of 10%. When applying the methods to AVHRR historical data from the 1980's, the results have errors equivalent to those derived from MODIS.

AVHRR↗

Modeling Phenological Controls on Carbon Dynamics in Dryland Sagebrush Ecosystems

Dryland ecosystems play an important role in determining how precipitation anomalies affect terrestrial carbonfluxes at regional to global scales. Thus, to understand how climate change may affect the global carbon cycle,we must also be able to understand and model its effects on dryland vegetation. Dynamic Global VegetationModels (DGVMs) are an important tool for modeling ecosystem dynamics, but they often struggle to reproduceseasonal patterns of plant productivity. Because the phenological niche of many plant species is linked to bothtotal productivity and competitive interactions with other plants, errors in how process-based models representphenology hinder our ability to predict climate change impacts. This may be particularly problematic in drylandecosystems where many species have developed a complex phenology in response to seasonal variability in bothmoisture and temperature. Here, we examine how uncertainty in key parameters as well as the structure ofexisting phenology routines affect the ability of a DGVM to match seasonal patterns of leaf area index (LAI) andgross primary productivity (GPP) across a temperature and precipitation gradient. First, we optimized modelparameters using a combination of site-level eddy covariance data and remotely-sensed LAI data. Second, wemodified the model to include a semi-deciduous phenology type and added flexibility to the representation ofgrass phenology. While optimizing parameters reduced model bias, the largest gains in model performance wereassociated with the development of our new representation of phenology. This modified model was able to bettercapture seasonal patterns of both leaf area index (R2=0.75) and gross primary productivity (R2=0.84), thoughits ability to estimate total annual GPP depended on using eddy covariance data for optimization. The new modelalso resulted in a more realistic outcome of modeled competition between grass and shrubs. These findingsdemonstrate the importance of improving how DGVMs represent phenology in order to accurately forecastclimate change impacts in dryland ecosystems.

Ecosystem model Phenology Parameter optimization E↗

A mathematical model for crop spectral-temporal trajectories based on a plant growth model

The Kubelka-Munk radiative transfer model is combined with an approximation of Kauth-Thomas greeness and brightness transforms to derive approximate closed form expressions for crop greeness and brightness surrogates in terms of canopy biomass. The greeness relation derived resembles an existing empirical relation between leaf area index and greeness. A simple growth model based on interception and utilization of photosynthetically active radiation is developed and used to describe the time evolution of greeness and brightness. The model developed does not yet yield definitive profile calculations but suggests a conceptual framework which may be found useful for further profile analysis.

Woolford, T. L.↗

The Design of a Remote Sensing Data Acquisition Campaign for Precision Agriculture and Some Early Results

In the 1970s NASA and the Department of Agriculture attempted to use the new Landsat MSS system for agricultural purposes. The program had relatively little success. With the advent of differential GPS, yield monitors on harvest equipment and higher spatial resolution remote sensing systems it seemed likely the situation should be reexamined. Therefore, a campaign of data acquisition involving remote sensing and other modalities with dependent research was assembled and funded by the Space Grant Consortia in Alabama and Georgia. The design of the remote sensing data acquisition was driven by the biology and physics of the crop system and limited by the available sensor platforms. Major parameters included crop stage, spatial resolution, seasonal and daily weather conditions, and which portion of the EM spectrum would actually capture the most discriminating information. Joint visible and Near IR with Thermal IR would permit use of existing indices, such as greenness, as well as phenomena driven by the plant' s evapotranspiration. Spatial resolution in the 2-5 meter range was chosen, avoiding many complexities caused by aliasing crop row spacing at, higher resolutions yet finer than the harvester's tightest recording rate. This dictates use of an airborne system. Use of an airborne system also makes scheduling around weather much simpler than use of satellite data. Active video calibration was recognized as essential if quantitative measures were ever to be obtained or reproduced. The system would also have to have onboard geoOF1 Based on these elements 3 data acquisitions have been flown. Seven flight lines were flown twice in 1998 and 16 lines flown in 1999. Total raw data is several GBytes. All of the data has now been geometrically corrected and some preliminary analysis accomplished. The thermal bands have an extremely high correlation with yield. For one@test case with corn, correlation in excess of 0.86 was obtained from a data acquisition two months prior to harvest! Soil images show significant within field variation in clay, soil brightness and emissivity. Light wind has been found to effect the reflectance and temperature of broad leaf crops, including soybeans, cotton and peanuts. Clearly, this work has already demonstrated some very important results. With continued development of the remote sensing technology there is good reason to believe this research will soon be able to help the individual farmer.

Rickmanl, D.↗

The Spacelab-Mir-1 "Greenhouse-2" experiment

The Spacelab-Mir-1 (SLM-1) mission is the first docking of the Space Shuttle Atlantis (STS-71) with the Orbital Station Mir in June 1995. The SLM-1 "Greenhouse-2" experiment will utilize the Russian-Bulgarian-developed plant growth unit (Svet). "Greenhouse-2" will include two plantings (1) designed to test the capability of Svet to grow a crop of Superdwarf wheat from seed to seed, and (2) to provide green plant material for post-flight analysis. Protocols, procedures, and equipment for the experiment have been developed by the US-Russian science team. "Greenhouse-2" will also provide the first orbital test of a new Svet Instrumentation System (SIS) developed by Utah State University to provide near real time data on plant environmental parameters and gas-exchange rates. SIS supplements the Svet control and monitoring system with additional sensors for substrate moisture, air temperature, IR leaf temperature, light, oxygen, pressure, humidity, and carbon-dioxide. SIS provides the capability to monitor canopy transpiration and net assimilation of the plants growing in each vegetation unit (root zone) by enclosing the canopy in separate, retractable, ventilated leaf chambers. Six times during the seed-to-seed experiment, plant samples will be collected, leaf area measured, and plant parts fixed and/or dried for ground analysis. A second planting initiated 30 days before the arrival of a U.S. Shuttle [originally planned to be STS-71] is designed to provide green material at the vegetative development stage for ground analysis. [As this paper is being edited, the experiment has been delayed until after the arrival of STS-71.].

Non-NASA Center↗