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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 127 records · Page 7
All sourcesNASA NTRSDOE OSTI
DOE OSTI2020

Machine Learning Algorithm Identifies an Antibiotic Vocabulary for Permeating Gram-Negative Bacteria

Drug discovery faces a crisis. The industry has used up the “obvious” space in which to find novel drugs for biomedical applications, and productivity is declining. One strategy to combat this is rational approaches to expand the search space without relying on chemical intuition, to avoid rediscovery of similar spaces. Here, we present proof of concept of an approach to rationally identify a “chemical vocabulary” related to a specific drug activity of interest without employing known rules. We focus on the pressing concern of multidrug resistance in Pseudomonas aeruginosa by searching for submolecules that promote compound entry into this bacterium. By synergizing theory, computation, and experiment, we validate our approach, explain the molecular mechanism behind identified fragments promoting compound entry, and select candidate compounds from an external library that display good permeation ability.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

An image classification deep-learning algorithm for shrapnel detection from ultrasound images

Ultrasound imaging is essential for non-invasively diagnosing injuries where advanced diagnostics may not be possible. However, image interpretation remains a challenge as proper expertise may not be available. In response, artificial intelligence algorithms are being investigated to automate image analysis and diagnosis. Here, we highlight an image classification convolutional neural network for detecting shrapnel in ultrasound images. As an initial application, different shrapnel types and sizes were embedded first in a tissue mimicking phantom and then in swine thigh tissue. The algorithm architecture was optimized stepwise by minimizing validation loss and maximizing F1 score. The final algorithm design trained on tissue phantom image sets had an F1 score of 0.95 and an area under the ROC curve of 0.95. It maintained higher than a 90% accuracy for each of 8 shrapnel types. When trained only on swine image sets, the optimized algorithm format had even higher metrics: F1 and area under the ROC curve of 0.99. Overall, the algorithm developed resulted in strong classification accuracy for both the tissue phantom and animal tissue. This framework can be applied to other trauma relevant imaging applications such as internal bleeding to further simplify trauma medicine when resources and image interpretation are scarce.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Inference of response functions with the help of machine-learning algorithms

Response functions are a key quantity to describe the near-equilibrium dynamics of strongly interacting many-body systems. Recent techniques that attempt to overcome the challenges of calculating these ab initio have employed expansions in terms of orthogonal polynomials. We employ a neural network prediction algorithm to reconstruct a response function 𝑆⁡(𝜔) defined over a range in frequencies 𝜔. Here, we represent the calculated response function as a truncated Chebyshev series whose coefficients can be optimized to reduce the representation error. We compare the quality of response functions obtained using coefficients calculated using a neural network (NN) algorithm with those computed using the Gaussian integral transform (GIT) method. In the regime where only a small number of terms in the Chebyshev series are retained, we find that the NN scheme outperforms the GIT method.

Kurkcuoglu, Doga Murat [Fermi National Accelerator↗
DOE OSTI2018

Unobtrusive Sensor-Based Occupancy Facing Direction Detection and Tracking Using Advanced Machine Learning Algorithms

Facing direction detection plays a critical role in human-computer interaction and has a wide application in surveillance systems, driving awareness recognition, smart home appliances, computer games, and so on. Current detection methods are mainly focused on extracting specific patterns from user's optical images, which raises concerns on privacy invasion and these detection techniques do not usually work in a dark environment. To address these concerns, here this paper proposes an activity recognition system guided by an unobtrusive sensor (ARGUS). By using a low pixel infrared thermopile array sensor, ARGUS is capable of identifying five facing directions (left 45°/90°, right 45°/90°, and front) through the support vector machine classifier. Also two feature extraction methods are compared. One is manually-defined and the other is based on a pre-trained convolutional neural network (CNN) model. The facing direction detection accuracy resulting from manually-defined features reaches 85.3%, 90.6%, and 85.2% at detection distance of 0.6, 1.2, and 1.8 m, respectively. The level of accuracy resulted from using pre-trained CNN features demonstrates a much more reliable performance (89.1%, 95.3%, and 95.1% at distance of 0.6, 1.2, and 1.8 m, respectively). In addition, ARGUS has been successfully applied for occupancy tracking with a root mean square error of 0.19 m.

42 ENGINEERING↗
DOE OSTI2021

Optimization of microwave emission from laser filamentation with a machine learning algorithm

We demonstrate that is it possible to optimize the yield of microwave radiation from plasmas generated by laser filamentation in atmosphere through manipulation of the laser wavefront. A genetic algorithm controls a deformable mirror that reconfigures the wavefront using the microwave waveform amplitude as feedback. Optimization runs performed as a function of air pressure show that the genetic algorithm can double the microwave field strength relative to when the mirror surface is flat. Here, an increase in the volume and brightness of the plasma fluorescence accompanies the increase in microwave radiation, implying an improvement in the laser beam intensity profile through the filamentation region due to the optimized wavefront.

Englesbe, Alexander↗
DOE OSTI2019

Wireless 3D Nanorod Composite Arrays based High Temperature Surface-Acoustic-Wave Sensors for Selective Gas Detection through Machine Learning Algorithms (Final Report)

This is the final scientific and technical report which summarizes the research conducted through this funded project. In this report, we first present the accomplishments of the project, major research activities and specific activities conducted, and then discuss the significant results. We also describe the opportunities for training and professional development provided to the involved students as well as the products produced. Finally, we report the impact of the research on the development of human resources and present the budgetary information.

42 ENGINEERING↗
DOE OSTI2019

A Decision Tree Based Machine Learning Algorithm for Rate Estimation

A subgraph isomorphic decision tree algorithm was developed for estimating chemical reaction rates. The algorithm essentially associates differences in rate estimation with differences in sub-structures on the reactant or reactants, and the tree splits reactions into groups with similar rates by identifying the substructural differences that affect rate estimation the most. The algorithm was trained on rates from the Reaction Mechanism Generator (RMG) database and compared with a much more traditional rate rule estimator based on the same data. Compared to the previous RMG rate rules, the prediction accuracy of the new algorithm, measured by median absolute error (MAE) factor, root mean squared error (RMSE) factor, and 2-sigma error factor, is consistently improved by a factor of two. Uncertainty estimation was also developed for the decision trees based on fitting a lognormal distribution to the leave-one-out errors at each node. Improvements in accuracy introduced by the algorithm should significantly reduce the amount of effort required to refine models and the need for additional quantum calculations and thus reduce the amount of time and cost required to create and refine biofuel models.

Johnson, Matthew S.↗
DOE OSTI2021

Towards memristor supremacy with novel machine learning algorithms

The von Neumann architecture for current computers is slowly showing signs of limitations, due to the finite bus rate between the RAM (memory) and the CPU (computing unit). In-Memory computing is an alternative to this architecture, which however is still in the early stages of development. Memristors are an analog and classical alternative, as these components can act both as a memory, or as a simple computing unit. When wired together, these can in fact be used for a variety of applications. During the course of our research, we have developed an in-depth experimental understanding of both the limitations and the real possibilities of these devices, and developed automated algorithms for their characterization; at the theoretical level, we have incorporated the experimental features to implement novel analog computing units for specific tasks. We have shown that memristors can tackle QUBO and cubic optimization problems, and exhibit tunneling phenomena.

97 MATHEMATICS AND COMPUTING↗