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NASA NTRSDate not supplied

The Radiation Biology Ontology: A New Tool Supporting FAIR Principles Across Radiation Biology Facilitating Data Discovery and Integration

Development of the Radiation Biology Ontology (RBO) was motivated by the need for a comprehensive, well-structured ontology for encoding radiation biology metadata. The primary use-cases were archiving data in the STORE database (https://www.storedb.org/), the repository for the RadoNorm Project, and in GeneLab (https://genelab.nasa.gov), NASA’s ‘omics database. The scope of radiobiology research ranges from physics to radiation oncology to socio-legal studies; no existing ontology has the necessary breadth or depth. In addition, a formal ontology has the advantage of being usable for machine learning and, importantly, for tasks like data integration, knowledge extraction from the scientific literature and for query extension and data classification. Standardisation of metadata is one of the primary objectives of the FAIR principles for open data; RBO is an important landmark for FAIR radiation biology data.

ontology↗

NASA NTRS1976

Results of a comprehensive atmospheric aerosol-radiation experiment in the southwestern United States. I - Size distribution, extinction optical depth and vertical profiles of aerosols suspended in the atmosphere. II - Radiation flux measurements and

Results are reported for a field test that was aimed at acquiring a sufficient set of measurements of aerosol properties required as input for radiative-transfer calculations relevant to the earth's radiation balance. These measurements include aerosol extinction and size distributions, vertical profiles of aerosols, and radiation fluxes. Physically consistent, vertically inhomogeneous models of the aerosol characteristics of a turbid atmosphere over a desert and an agricultural region are constructed by using direct and indirect sampling techniques. These results are applied for a theoretical interpretation of airborne radiation-flux measurements. The absorption term of the complex refractive index of aerosols is estimated, a regional variation in the refractive index is noted, and the magnitude of solar-radiation absorption by aerosols and atmospheric molecules is determined.

Deluisi, J. J.↗

NASA NTRS2005

Interannual Variability in Surface LW Fluxes Over the Tropical Oceans As Seen in ISCCP-FD and GEWEX SRB Data Sets

One notable aspect of Earth s climate is that although the planet appears to be very close to radiative balance at top-of-atmosphere (TOA), the atmosphere itself and underlying surface are not. Profound exchanges of energy between the atmosphere and oceans, land and cryosphere occur over a range of time scales. Recent evidence from broadband satellite measurements suggests that even these TOA fluxes contain some detectable variations. Our ability to measure and reconstruct radiative fluxes at the surface and at the top of atmosphere is improving rapidly. In this work we will evaluate two recently released estimates of radiative fluxes, focusing primarily on surface estimates. The International Satellite Cloud Climatology Project FD radiative flux profiles are available from mid-1 983 to near present and have been constructed by driving the radiative transfer physics from the Goddard Institute for Space Studies (GISS) global model with ISCCP clouds and TOVS (TIROS Operational Vertical Sounder)thermodynamic profiles. Fu!l and clear sky SW and LW fluxes are produced. A similar product from the NASA/GEWEX Surface Radiation Budget Project using different radiative flux codes and thermodynamics from the NAS/Goddard Earth Observing System (GEOS-1) assimilation model makes a similar calculation of surface fluxes. However this data set currently extends only through 1995. Significant differences in both interannual variability as well as trends are found between among these data sets. For radiative fluxes these differences are traced to TOVS thermodynamic soundings used to drive the ISCCP-FD calculations. Errors in near surface temperature and precipitable water cascade into ISCCP upward and downward IR flux components, demonstrably affecting interannual variability. Revised estimates of clear-sky fluxes over ocean are made using statistical algorithms and water vapor from the (SSM/I) Special Sensor Microwave Imager. These calculations show strong near-surface water vapor feedback over the tropical oceans in association with SST changes. However, it is also shown that ISCCP longwave cloud forcing, common to both the ISCCP-FD and GEWEX SRB retrievals, is the main driver of a long-term decrease in net LW flux to the surface during the near-20 year period covered by these revised estimates.

Robertson, F. R.↗

NASA NTRS2001

Cloud Spatial Structure and 3D Radiative Transfer

Cloud radiative properties are sensitive to drop size and other parameters of cloud micro-structure, but also to cloud shape, spacing, and other parameters of cloud macro-structure, including internal fractal structure. New information on cloud structure is being derived from a variety of cloud radars and lidars. Ongoing field programs such as DoE/ARM are improving the measurement and modelling of physical and radiative properties of clouds. A parallel effort is underway to improve cloud remote sensing, especially from the new suite of EOS (Earth Observing System) instruments which are beginning to provide higher spectral, spatial resolution, and/or angular resolution. Key parameters for improving pixel-scale retrievals are cloud thickness and photon mean-free-path, which together determine the scale of "radiative smoothing" of cloud fluxes and radiances. This scale has been observed as a change in the spatial spectrum of Landsat cloud radiances, and was also recently found with the Goddard micropulse lidar, by searching for returns from directions nonparallel to the incident beam. "Offbeam" Lidar returns are now being used to estimate the cloud "radiative Green's function", (G). G depends on cloud thickness and may be used to retrieve that important quantity. G is also being applied to improving simple estimates of cloud radiative properties that are based on the "Independent Pixel Approximation" or IPA. This and other measurements of 3D transfer in clouds, coupled with Monte Carlo and other 3D transfer methods, are beginning to provide a better understanding of the dependence of radiation on cloud inhomogeneity, and to suggest new retrieval and parameterization algorithms which take account of cloud inhomogeneity. An international "Intercomparison of 3D Radiation Codes" or I3RC, program is underway to coordinate and evaluate the variety of 3D radiative transfer methods now available, and to make them more widely available. Information is on the Web at: http://climate.gsfc.nasa.gov/I3RC. Input consists of selected cloud fields derived from data sources such as radar, microwave and satellite, and from models involved in the GEWEX Cloud Systems Studies. Output is selected radiative quantities that characterize the large-scale properties of the fields of radiative fluxes and heating. Several example cloud fields will be used to illustrate the effects of cloud inhomogeneity and 3D radiation.

Cahalan, Robert F.↗

NASA NTRS1999

Cloud Spatial Structure and 3D Radiative Transfer

Cahalan, Robert F.↗

NASA NTRS1993

Foundations for statistical-physical precipitation retrieval from passive microwave satellite measurements. II - Emission-source and generalized weighting-function properties of a time-dependent cloud-radiation model

The foremost physical aspects of microphysical-radiative interactions that control the formation and modulation of frequency-dependent passive microwave TB over a continental cold-rain precipitation system are explained within the framework of the essential ingredients of a physically based precipitation-retrieval algorithm. The analysis is based on a modeling study in which a 3D cloud model has provided the objective basis for generating an extensive set of microphysical profiles that describe numerous precipitation features in the course of the evolution of a continental hail storm. A summary of the various components of the algorithm, as well as the surface rain rates, is given. The algorithm employs the cloud model to provide a consistent and objectively generated source of detailed microphysical information as the underpinnings to an inversion-based perturbative retrieval scheme.

Mugnai, Alberto↗

NASA NTRSDate not supplied

Data Sharing in Radiobiology; Towards FAIR

The value of scientific data depends on their findability, accessibility, integrability and reusability according to the FAIR principles. Together with the sustainability of data preservation and access, these principles underpin the long term benefits of scientific research. Within the domain of radiobiology we have a huge array of data types, themes and complexities which make standardisation of metadata, data structure and data integration very challenging. Moreover, it is clear that, for example, in the area of disaster preparedness, the ready discovery and availability of multiple types of data, for example on biological effects of exposure, climatology, ecology, human behavioural and attitudinal studies, is important for an integrated scientific approach. Because these data are spread over many databases, journal supplementary information resources and even the computers of the investigators, their discovery and reuse can be challenging. Despite exhortations from funding agencies and scientific institutions over the past two decades there is still a serious deficit in the willingness and in some cases the ability of investigators to share data, and although much may not be formally „Public domain“, information about the existence of the data, their metadata, and how to obtain them should always be available. We report the progress of work on three databases, the STORE and the NASA GeneLab and LSDA repositories to leverage the Radiation Biology Ontology (RBO), a structured terminology for metadata that can be used by all radiation biology-relevant databases to unite federated and automated data searches across multiple databases, for example using web services, and through semantic web technologies supporting data discovery. The initial primary use-cases for RBO were archiving data in the STORE database (https://www.storedb.org/), the repository used for the RadoNorm and Pianoforte Projects among others, and in the NASA Open Science Data Repository (https://osdr.nasa.gov/bio). The scope of radiobiology research ranges from basic physics to radiation oncology to sociolegal studies; no existing ontology had the necessary breadth or depth to fulfill this need. In addition, a formal ontology has the advantage of being usable for machine learning and, importantly, for tasks like data integration, knowledge extraction from the scientific literature and for query extension and data classification. Standardisation of metadata is one of the primary objectives of the FAIR principles for open data; RBO is an important landmark for FAIR-compliant radiation biology data sharing. The RBO is developed using the open-source tools of GitHub and the OBO Foundry-led Ontology Development Kit, and published through GitHub and the NIH/NCBI BioPortal website. This initial phase of concept modeling has yielded an ontology that has more than 300 declared concepts, with more than 3500 additional concepts imported from other OBO Foundry ontologies with relevance to radiation biology (for example, concepts from the ISO standard Basic Formal Ontology, the Environment Ontology and the Gene Ontology). We welcome input into the development of RBO and encourage its adoption.

ontologies↗

NASA NTRS2023

Data Sharing in Radiation Biology: Towards FAIR

The value of scientific data depends on their findability, accessibility, integrability and reusability according to the FAIR principles. Together with the sustainability of data preservation and access, these principles underpin the long term benefits of scientific research. Within the domain of radiobiology we have a huge array of data types, themes and complexities which make standardisation of metadata, data structure and data integration very challenging. Moreover, it is clear that, for example, in the area of disaster preparedness, the ready discovery and availability of multiple types of data, for example on biological effects of exposure, climatology, ecology, human behavioural and attitudinal studies, is important for an integrated scientific approach. Because these data are spread over many databases, journal supplementary information resources and even the computers of the investigators, their discovery and reuse can be challenging. Despite exhortations from funding agencies and scientific institutions over the past two decades there is still a serious deficit in the willingness and in some cases the ability of investigators to share data, and although much may not be formally "Public domain“, information about the existence of the data, their metadata, and how to obtain them should always be available. We report the progress of work on three databases, the STORE and the NASA GeneLab and LSDA repositories to leverage the Radiation Biology Ontology (RBO), a structured terminology for metadata that can be used by all radiation biology-relevant databases to unite federated and automated data searches across multiple databases, for example using web services, and through semantic web technologies supporting data discovery. The initial primary use-cases for RBO were archiving data in the STORE database (https://www.storedb.org/), the repository used for the RadoNorm and Pianoforte Projects among others, and in the NASA Open Science Data Repository (https://osdr.nasa.gov/bio). The scope of radiobiology research ranges from basic physics to radiation oncology to sociolegal studies; no existing ontology had the necessary breadth or depth to fulfill this need. In addition, a formal ontology has the advantage of being usable for machine learning and, importantly, for tasks like data integration, knowledge extraction from the scientific literature and for query extension and data classification. Standardisation of metadata is one of the primary objectives of the FAIR principles for open data; RBO is an important landmark for FAIR-compliant radiation biology data sharing. The RBO is developed using the open-source tools of GitHub and the OBO Foundry-led Ontology Development Kit, and published through GitHub and the NIH/NCBI BioPortal website. This initial phase of concept modeling has yielded an ontology that has more than 300 declared concepts, with more than 3500 additional concepts imported from other OBO Foundry ontologies with relevance to radiation biology (for example, concepts from the ISO standard Basic Formal Ontology, the Environment Ontology and the Gene Ontology). We welcome input into the development of RBO and encourage its adoption.

ontologies↗

NASA NTRS2021

Thermal Radiator for CO2 Deposition in Deep Space Transit (FY21 XHab Final Report - University of North Texas)

This UNT Senior design team was tasked by NASA to develop a variable conductance thermal radiator prototype for CO2 deposition for deep space transit. NASA selects university teams every year to partake in the X-HAB Academic Innovation Challenge, with this year’s number of teams being six. Air Revitalization is a crucial system for any space travel, be it for Low Earth Orbit, such as the International Space Station, or for deep space transit. Current systems, such as the Carbon Dioxide Removal Apparatus aboard the ISS, require upkeep and maintenance, which cannot be done on long distance space missions. For the past several years, NASA has done research on Cryogenic systems for Carbon Dioxide removal. These systems operate on the fact that Carbon Dioxide freezes at a higher temperature than Oxygen and Nitrogen, so Carbon Dioxide can be frozen out of the cabin atmosphere without the use of filters, which degrade over time. To cool the cabin air down to a temperature where Carbon Dioxide freezes, Stirling cryocoolers have been used, which have shown promise in the hope of Carbon Dioxide deposition for Cabin Air Revitalization. Cryogenic systems are much more reliable but require significant energy input to operate. Physical systems, such as radiators, have generally not been used for this task, as there is a need to be able to “turn off” the rejection of heat to allow the frozen carbon dioxide to be collected. However, with working fluids pumped through a physical radiator, that aspect of operation can be achieved. The goal of this challenge is to determine the effectiveness of a variable conductance thermal radiator that can reject heat to deep space, without the use of a dedicated cryocooler to remove energy from the cabin air. The proposed design uses piping, hot and cold working fluids, and non-condensable gas to absorbl heat from the cabin air on one side of the radiator and reject the heat to deep space by means of thermal radiation. As well, the system will allow for the recovery of deposited Carbon Dioxide. The UNT X-HAB 2021 team will create a model radiator and test its performance with simulated heat sources and sinks and extrapolate those data points to analyze for real world conditions.

Travis Seaver↗

NASA NTRS2012

The Mars Dust Cycle: Investigating the Effects of Radiatively Active Water Ice Clouds on Surface Stresses and Dust Lifting Potential with the NASA Ames Mars General Circulation Model

The dust cycle is a critically important component of Mars' current climate system. Dust is present in the atmosphere of Mars year-round but the dust loading varies with season in a generally repeatable manner. Dust has a significant influence on the thermal structure of the atmosphere and thus greatly affects atmospheric circulation. The dust cycle is the most difficult of the three climate cycles (CO2, water, and dust) to model realistically with general circulation models. Until recently, numerical modeling investigations of the dust cycle have typically not included the effects of couplings to the water cycle through cloud formation. In the Martian atmosphere, dust particles likely provide the seed nuclei for heterogeneous nucleation of water ice clouds. As ice coats atmospheric dust grains, the newly formed cloud particles exhibit different physical and radiative characteristics. Thus, the coupling between the dust and water cycles likely affects the distributions of dust, water vapor and water ice, and thus atmospheric heating and cooling and the resulting circulations. We use the NASA Ames Mars GCM to investigate the effects of radiatively active water ice clouds on surface stress and the potential for dust lifting. The model includes a state-of-the-art water ice cloud microphysics package and a radiative transfer scheme that accounts for the radiative effects of CO2 gas, dust, and water ice clouds. We focus on simulations that are radiatively forced by a prescribed dust map, and we compare simulations that do and do not include radiatively active clouds. Preliminary results suggest that the magnitude and spatial patterns of surface stress (and thus dust lifting potential) are substantial influenced by the radiative effects of water ice clouds.

Kahre, Melinda A.↗

NASA NTRS1987

The physics of interstellar shock waves

This review discusses the observations and theoretical models of interstellar shock waves, in both diffuse cloud and molecular cloud environments. It summarizes the relevant gas dynamics, atomic, molecular and grain processes, radiative transfer, and physics of radiative and magnetic precursors in shock models. It then describes the importance of shocks for observations, diagnostics, and global interstellar dynamics. It concludes with current research problems and data needs for atomic, molecular and grain physics.

Shull, J. Michael↗

NASA NTRS1973

Introduction to stellar atmospheres and interiors

Stellar atmospheres are examined, giving attention to the transfer of radiation, the physical properties of gases, model atmospheres, and questions of line absorption in stellar atmospheres. Observational data are considered together with the equations for the stellar interior and aspects of stellar evolution. The calculation of model atmospheres and interiors is also discussed, taking into account numerical integration, a model solar atmosphere, and model stellar interiors.

Novotny, E.↗

NASA NTRS1976

Absorption of radiation belt particles by the inner satellites of Jupiter

The study of trapped particle absorption by the inner Jovian satellites is reviewed from the viewpoint of radiation belt physics. Both pre- and post-Pioneer work is discussed but the emphasis is on methods used to deduce radial diffusion coefficients of particle transport from particle data. The phenomenon of particle absorption as observed by experiments on Pioneers 10 and 11 is considered; absorption effects are found to depend on the satellite, and on particle energy and species. Approximate diffusion coefficients derived from the data are found to follow a steeper spatial dependence than previously expected. The assumptions and limitations of absorption analysis and diffusion coefficient estimation are pointed out.

Mogro-Campero, A.↗

NASA NTRS1977

Interpretation of Beta Lyrae. III - A study of the disk around the secondary component

Light curves of Beta Lyrae available in the far-ultraviolet, visual, and infrared regions of the spectrum at numerous phases in eclipse are analyzed in order to investigate the physical and radiative nature of the disk surrounding the secondary component. The results of this analysis together with those of other investigators lead to the proposal that the outer regions of the disk are dominated by free electrons. This electron-scattering envelope is most likely the source of infrared radiation as well as the cause of the observed polarization. However, the radiation in the region from the optical to the far-ultraviolet comes mainly from submerged layers where local thermodynamic equilibrium prevails. These layers represent the photosphere of either the disk or the secondary component itself.

Brown, D. A.↗

NASA NTRS1985

On the Role Played by Lines in Radiatively Driven Stellar Winds Depending on the Position of the Stars in the HR Diagram

The radiative force due to transfer in ultraviolet lines is always an important mechanism in hot star wind dynamics. However, it is not clear when it is the dominant mechanism and which are the noise parameters. To investigate the efficiency of purely radiative momentum/energy transfer in hot star winds and in various regions of the HR diagram, the Leroy and Lafon model was improved and put to its limits; correlations between the mass loss rate, the luminosity and other parameters and the theoretical and the observational results, looking for observed stars violating the model were compared. It is concluded that in widespread region of the HR diagram, line driven models are consistent with observations, the radiative equilibrium physics is relevant throughout the expanding atmospheres and the mass loss rate is quasilinearly correlated with the luminosity.

Migozzi, M. C.↗

NASA NTRS1986

Satellite microwave and in situ observations of the Weddell Sea ice cover and its marginal ice zone

The radiative and physical characteristics of the Weddell Sea ice cover and its marginal ice zone are analyzed using multichannel satellite passive microwave data and ship and helicopter observations obtained during the 1983 Antarctic Marine Ecosystem Research. Winter and spring brightness temperatures are examined; spatial variability in the brightness temperatures of consolidated ice in winter and spring cyclic increases and decrease in brightness temperatures of consolidated ice with an amplitude of 50 K at 37 GHz and 20 K at 18 GHz are observed. The roles of variations in air temperature and surface characteristics in the variability of spring brightness temperatures are investigated. Ice concentrations are derived using the frequency and polarization techniques, and the data are compared with the helicopter and ship observations. Temporal changes in the ice margin structure and the mass balance of fresh water and of biological features of the marginal ice zone are studied.

Comiso, J. C.↗

NASA NTRS1988

Diode-Laser Array Suppresses Extraneous Modes

Diode parameters varied to shape output beam. Array of phase-locked GaAs/GaAIAs diode lasers produces light beam with one main radiation lobe. Physical parameters of laser diodes differ from each other in way that favors oscillation in fundamental supermode, suppressing oscillation in higher-order modes.

Kapon, Elyahou↗

NASA NTRS1988

Aerosol formation and distribution in the Arctic during AGASP-II, March-April 1986

The Arctic Gas and Aerosol Sampling Program has undertaken the determination of the distribution, transport, chemistry, aerosol physics, and radiative effects of the 'Arctic haze' air-pollution phenomenon. Attention has been given the April 2-3, 1986 haze zone, with large condensation nuclei, SO2, and soot-carbon concentrations, which appeared near the Barrow Baseline Station. The composite trajectory of the haze zone has been determined, as has its probable source region. After travelling 10,000 km, the haze still had SO2, aerosol black carbon, and condensation nuclei concentrations in excess of those measured off the East Coast of the U.S. in January of the same year.

Schnell, Russell C.↗