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Predictive Phenomics Initiative Project Dataset Catalog Collection

The Predictive Phenomics Science & Technology Initiative (PPI) at Pacific Northwest National Laboratory are tackling the grand challenge of understanding and predicting phenotype by identifying the molecular basis of function and enable function-driven design and control of biological systems. Research projects within this initiative are divided into three Thrust Areas (TAs): TA1) Enhancing Multi-Scale Phenomics Measurements, TA2) Identifying Molecular Patterns of Biological Function, and TA3) Computational Methods - Phenotypic Signatures. In efforts to enable discovery, reproducibility, and reuse of PPI-funded digital research data generated or used through the course of the proposed research-funded lifecycles, all corresponding digital data assets conducted under the Laboratory Directed Research and Development Program at PNNL are linked to this PPI dataset catalog collection.

59 BASIC BIOLOGICAL SCIENCES

The NASA Tournament Laboratory (NTL): Improving Data Access at PDS while Spreading Joy and Engaging Students through 16 Micro-Contests

NASA PDS hosts terabytes of valuable data from hundreds of data sources and spans decades of research. Data is stored on flat-file systems regulated through careful meta dictionaries. PDS's data is available to the public through its website which supports data searches through drill-down navigation. While the system returns data quickly, result sets in response to identical input differ depending on the drill-down path a user follows. To correct this Issue, to allow custom searching, and to improve general accessibility, PDS sought to create a new data structure and API, and to use them to build applications that are a joy to use and showcase the value of the data to students, teachers and citizens. PDS engaged TopCoder and Harvard Business School through the NTL to pursue these objectives in a pilot effort. Scope was limited to Small Bodies Node data. NTL analyzed data, proposed a solution, and implemented it through a series of micro-contests. Contest focused on different segments of the problem; conceptualization, architectural design, implementation, testing, etc. To demonstrate the utility of the completed solution, NTL developed web-based and mobile applications that can compare targets, regardless of mission. To further explore the potential of the solution NTL hosted "Mash-up" challenges that integrated the API with other publically available assets, to produce consumer and teaching applications, including an Augmented Reality iPad tool. Two contests were also posted to middle and high school students via the NoNameSite.com platform, and as a result of these contests, PDS/SBN has initiated a Facebook program. These contests defined and implemented a data warehouse with the necessary migration tools to transform legacy data, produced a public web interface for the new search, developed a public API, and produced four mobile applications that we expect to appeal to users both within and, without the academic community.

LaMora, Andy

Application of Atmospheric Infrared Sounder (AIRS) Data to Climate Research

The application of hyper spectral radiometric data to climate research requires very high absolute radiometric accuracy and stability. We use cloud-free tropical ocean data from the Atmospheric InfraRed Sounder (AIR) Calibration Data Subset (ADCS) to show that the radiometric precision and stability required climate applications has been achieved. The sea surface skin temperatures derived from the AIRS 2616cm-1 super window channel are stable relative to the RTG.SST at the better than 8 mK/year level, and the spectral calibration is stable at the 1 ppm/year level. The excellent stability and accuracy are the result of the implementation of AIRS as a grating array spectrometer, which is cooled and stabilized within 10 mK at 155 K. Analysis of daily measurements of the temperature gradient between the surface and 7 km altitude show that the AIRS Calibration Data Subset has applications which extend its original intent for calibration support to climate research. The Atmospheric Infrared Sounder (AIRS) on the EOS Aqua satellite was launched into polar orbit in May 2002. AIRS covers the spectral region from 640 to 2700 cm-1 with 2378 independent channels and represents the first of a new generation of hyper spectral resolution sounders in support of global sounding data for weather forecasting and climate research.

infrared

Introduction to the Special Session on Thermal Remote Sensing Data for Earth Science Research: The Critical Need for Continued Data Collection and Development of Future Thermal Satellite Sensors

There is a rich and long history of thermal infrared (TIR) remote sensing data for multidisciplinary Earth science research. The continuity of TIR data collection, however, is now in jeopardy given there are no planned future Earth observing TIR remote sensing satellite systems with moderately high spatial resolutions to replace those currently in orbit on NASA's Terra suite of sensors. This session will convene researchers who have actively worked in the field of TIR remote sensing to present results that elucidate the importance of thermal remote sensing to the wider Earth science research community. Additionally, this session will also exist as a forum for presenting concepts and ideas for new thermal sensing systems with high spatial resolutions for future Earth science satellite missions, as opposed to planned systems such as the Visible/Infrared Imager/Radiometer (VIIRS) suite of sensors on the National Polar-orbiting Operational Environmental Satellite System (NPOESS) that will collect TIR data at very coarse ~~~iairesolutions.

Quattrochi, Dale a.

Meeting Expanding Needs to Collect Food Intake Specificity: The Nutrition Data System for Research (NDS-R)

Food and nutrient databases are populated with data obtained from a variety of sources including USDA Reference Tables, scientific journals, food manufacturers and foreign food tables. The food and nutrient database maintained by the Nutrition Coordinating Center (NCC) at the University of Minnesota is continually updated with current nutrient data and continues to be expanded with additional nutrient fields to meet diverse research endeavors. Data are strictly evaluated for reliability and relevance before incorporation into the database; however, the values are obtained from various sources and food samples rather than from direct chemical analysis of specific foods. Precise nutrient values for specific foods are essential to the nutrition program at the National Aeronautics and Space Administration (NASA). Specific foods to be included in the menus of astronauts are chemically analyzed at the Johnson Space Center for selected nutrients. A request from NASA for a method to enter the chemically analyzed nutrient values for these space flight food items into the Nutrition Data System for Research (NDS-R) software resulted in modification of the database and interview system for use by NASA, with further modification to extend the method for related uses by more typical research studies.

VanHeel, Nancy

Microgravity Research Results and Experiences from the NASA Mir Space Station Program

The Microgravity Research Program Office (MRPO) participated aggressively in Phase I of the International Space Station Program using the Russian Mir Space Station. The Mir Station offered an otherwise unavailable opportunity to explore the advantages and challenges to long duration microgravity space research. Payloads with both NASA and commercial backing were included as well as cooperative research with the Canadian Space Agency (CSA). From this experience, much was learned about dealing with long duration on orbit science utilization and developing new working relationships with our Russian partner to promote efficient planning, operations, and integration to solve complexities associated with a multiple partner program. Microgravity participation in the NASA Mir Program began with the first joint NASA Mir flight to the Mir Space Station. The earliest participation setup acceleration measurement capabilities that were used throughout the Program. Research, conducted by all Microgravity science disciplines, continued on each subsequent increment for the entire three-year duration of the Program. The Phase I Program included the Microgravity participation of over 30 Fluids, Combustion, Materials, and Biotechnology Sciences and numerous commercially sponsored research payloads. In addition to the research gained from Microgravity investigations, long duration operation of facility hardware was tested. Microgravity facilities operated on Mir included the Space Acceleration Measurement System (SAMS), the Microgravity Glovebox (MGBX), the Biotechnology System (BTS) and the Canadian Space Agency sponsored Microgravity Isolation Mount (MIM). The Russian OPTIZONE Furnace was also incorporated into our material science research. All of these efforts yielded significant and useful scientific research data. This paper focuses on the microgravity research conducted onboard the Mir space station. It includes the Program preparation and planning necessary to support this type of cross increment research experience; the payloads which were flown; and summaries of significant microgravity science findings. Most importantly this paper highlights the various disciplines of microgravity research conducted during the International Space Station, Phase 1 Program onboard the Mir Station. A capsulation of significant research and the applicability of our findings are provided. In addition, a brief discussion of how future microgravity science gathering capabilities, hardware development and payload operations techniques have enhanced our ability to conduct long duration microgravity research.

Schagheck, R. A.

Making Connections: Where STEM Learning and Earth Science Data Services Meet

STEM (Science, Technology, Engineering, Mathematics) learning is most effective when students are encouraged to see the connections between science, technology and real world problems. Helping to make these connections has become an increasingly important aspect of Earth Science data research. The Global Hydrology Resource Center (GHRC), one of NASA's 12 EOSDIS (Earth Observing System Data Information System) data centers, has developed a new type of documentation called the micro article to facilitate making connections between data and Earth science research problems.

Micro articles

The impact of WARC '79 on space applications and research

Prior to the 1979 World Administrative Radio Conference (WARC), no frequency bands were allocated for remote sensing measurements. Actions taken by the WARC insure that frequencies will be available for such use, and that operations can be conducted without harmful interference on a worldwide basis for the benefit of all nations. New global allocations for Space Research will permit worldwide acquisition of research data via relay satellites. Wideband allocations for deep-space research will allow more accurate position determination of deep-space probes and transmission of higher resolution data. The WARC had an impact on a number of other applications and research areas such as: meteorological satellites, land-mobile satellites, search and rescue systems, solar power satellites, standard-frequency satellites, radio astronomy and the search for extraterrestrial intelligence. The actions taken at the WARC affecting these services and applications will be described in the paper.

Kiebler, J. W.

Systems implications of L-band fade data statistics for LEO mobile systems

This paper examines and analyzes research data on the role of foliage attenuation in signal fading between a satellite transmitter and a terrestrial vehicle-mounted receiver. The frequency band of measurement, called L-Band, includes the region 1610.0 to 1626.5 MHz. Data from tests involving various combinations of foliage and vehicle movement conditions clearly show evidence of fast fading (in excess of 0.5 dB per millisecond) and fade depths as great or greater than 16 dB. As a result, the design of a communications link power control that provides the level of accuracy necessary for power sensitive systems could be significantly impacted. Specific examples of this include the communications links that employ Code Division Multiple Access (CDMA) as a modulation technique.

Devieux, Carrie L.

Polar Geophysics Products Derived from AVHRR: The "AVHRR Polar Pathfinder

This NOAA/NASA Pathfinder effort was established to locate, acquire, and process Advanced Very High Resolution Radiometer (AVHRR) imagery into geo-located and calibrated radiances, cloud masks, surface clear-sky broadband albedo, clear-sky skin temperatures, satellite viewing times, and viewing and solar geometry for the, high-latitude portions of the northern and southern hemispheres (all area north of 48N and south of 53S). AVHRR GAC data for August 1981 - July 1998 were acquired, with some gaps remaining, and processed into twice-daily 5-km grids, with some products also provided at 25-km resolution. AVHRR LAC data for 3.5 years of coverage in the northern hemisphere and 2.75 years of coverage in the southern hemisphere were processed into 1.25-km grids for the same suite of products. The resulting data sets are presently being transferred to the National Snow and Ice Data Center (NSIDC) for archiving and distribution. Using these data, researchers now have at their disposal an extensive AVHRR data set for investigations of high-latitude processes. In addition, the data lend themselves to development and testing of algorithms. The products are particularly relevant for climate research and algorithm development as applied to relatively long time periods and large areas.

Maslanik, James

Making Earth Science Data Records for Use in Research Environments (MEaSUREs) Projects Data and Services at the GES DISC

NASA's Earth Science Program is dedicated to advancing Earth remote sensing and pioneering the scientific use of satellite measurements to improve human understanding of our home planet. Through the MEaSUREs Program, NASA is continuing its commitment to expand understanding of the Earth system using consistent data records. Emphasis is on linking together multiple data sources to form coherent time-series, and facilitating the use of extensive data in the development of comprehensive Earth system models. A primary focus of the MEaSUREs Program is the creation of Earth System Data Records (ESDRs). An ESDR is defined as a unified and coherent set of observations of a given parameter of the Earth system, which is optimized to meet specific requirements for addressing science questions. These records are critical for understanding Earth System processes; for the assessment of variability, long-term trends, and change in the Earth System; and for providing input and validation means to modeling efforts. Seven MEaSUREs projects will be archived and distributed through services at the Goddard Earth Sciences Data and Information Services Center (GES DISC).

Vollmer, Bruce E.

Microgravity Science and Applications. Program Tasks and Bibliography for FY 1993

An annual report published by the Microgravity Science and Applications Division (MSAD) of NASA is presented. It represents a compilation of the Division's currently-funded ground, flight and Advanced Technology Development tasks. An overview and progress report for these tasks, including progress reports by principal investigators selected from the academic, industry and government communities, are provided. The document includes a listing of new bibliographic data provided by the principal investigators to reflect the dissemination of research data during FY 1993 via publications and presentations. The document also includes division research metrics and an index of the funded investigators. The document contains three sections and three appendices: Section 1 includes an introduction and metrics data, Section 2 is a compilation of the task reports in an order representative of its ground, flight or ATD status and the science discipline it represents, and Section 3 is the bibliography. The three appendices, in the order of presentation, are: Appendix A - a microgravity science acronym list, Appendix B - a list of guest investigators associated with a biotechnology task, and Appendix C - an index of the currently funded principal investigators.

Source record

The Intelligent Data Understanding Element of NASA's Intelligent Systems Program

Within the NASA Intelligent Systems Program, the Intelligent Data Understanding (IDU) element develops techniques for transforming data into scientific understanding. Automating such tools is critical for space science, space-based earth science, and planetary exploration with onboard scientific data analysis. Intelligent data understanding (IDU) is about extracting meaning from large, diverse science and engineering databases, via autonomous techniques that transform very large datasets into understanding. The earth science community in particular needs new tools for analyzing multi-formatted and geographically distributed datasets and for identifying cause-effect relationships in the complex data. Research within the IDU program element seeks to automate data analysis tasks so that humans can focus on creative hypothesis generation and knowledge synthesis. It may also enable NASA space missions in which autonomous agents must generate knowledge and take actions, and missions where limited bandwidth permits transmission of only the most interesting scientific observations, summaries, and conclusions. Twenty-seven research projects are-currently funded.

Coughlan, Joseph C.

Public Data Set: Initial Characterization of Electron Temperature and Density Profiles in PEGASUS Spherical Tokamak Discharges Driven Solely by Local Helicity Injection

This public data set contains openly-documented, machine readable digital research data corresponding to figures published in G.M. Bodner et al., ‘Initial Characterization of Electron Temperature and Density Profiles in PEGASUS Spherical Tokamak Discharges Driven Solely by Local Helicity Injection,’ Physics of Plasmas 28, 102504 (2021) and its erratum in Physics of Plasmas 31, 129904 (2024).

70 PLASMA PHYSICS AND FUSION TECHNOLOGY

Public Data Set: Effects of Injected Current Streams on MHD Equilibrium Reconstruction of Local Helicity Injection Plasmas in a Spherical Tokamak

This public data set contains openly-documented, machine readable digital research data corresponding to figures published in J.D. Weberski et al., 'Effects of Injected Current Streams on MHD Equilibrium Reconstruction of Local Helicity Injection Plasmas in a Spherical Tokamak,' Journal of Fusion Energy 43, 72 (2024).

70 PLASMA PHYSICS AND FUSION TECHNOLOGY

Public Data Set: A Magnetic Diagnostic Suite for the Pegasus-III Experiment

This public data set contains openly-documented, machine readable digital research data corresponding to figures published in J.A. Reusch et al., 'A Magnetic Diagnostic Suite for the Pegasus-III Experiment,' Review of Scientific Instruments 95, 093518 (2024). DOI: 10.1063/5.0219341

70 PLASMA PHYSICS AND FUSION TECHNOLOGY