A high throughput optical method for studying compositional effects in electrocatalysts for CO2 reduction
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99 GENERAL AND MISCELLANEOUS↗
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Broadly cross-reactive human antibodies that inhibit genogroup I and II noroviruses
The rational development of norovirus vaccine candidates requires a deep understanding of the antigenic diversity and mechanisms of neutralization of the virus. Here, we isolate and characterize a panel of broadly cross-reactive naturally occurring human monoclonal IgMs, IgAs and IgGs reactive with human norovirus (HuNoV) genogroup I or II (GI or GII). We note three binding patterns and identify monoclonal antibodies (mAbs) that neutralize at least one GI or GII HuNoV strain when using a histo-blood group antigen (HBGA) blocking assay. The HBGA blocking assay and a virus neutralization assay using human intestinal enteroids reveal that the GII-specific mAb NORO-320, mediates HBGA blocking and neutralization of multiple GII genotypes. The Fab form of NORO-320 neutralizes GII.4 infection more potently than the mAb, however, does not block HBGA binding. The crystal structure of NORO-320 Fab in complex with GII.4 P-domain shows that the antibody recognizes a highly conserved region in the P-domain distant from the HBGA binding site. Dynamic light scattering analysis of GII.4 virus-like particles with mAb NORO-320 shows severe aggregation, suggesting neutralization is by steric hindrance caused by multivalent cross-linking. Aggregation was not observed with the Fab form of NORO-320, suggesting that this clone also has additional inhibitory features.
59 BASIC BIOLOGICAL SCIENCES↗
PARP1-HPF1 structure and dynamics on nicked DNA suggest a mechanism for acute and localized ADP-ribosylation
PARP1 detection of DNA strand breaks allosterically leads to PARP1 synthesis of poly(ADP-ribose) modifications that signal DNA damage. HPF1 engages activated PARP1 to control modification site selection. Understanding of the mechanism of DNA break detection and catalytic activation is incomplete, due largely to limited structural information for full-length PARP1. Here, single-particle cryo-EM provides views of the full complement of PARP1 domains engaging a DNA single-strand break in the presence of HPF1 and a fragment of binding partner Timeless. Cryo-EM, single-molecule DNA dynamics, and small-angle X-ray scattering analysis indicate that PARP1 remains dynamic even when the multi-domain structure is organized on a DNA break, with the minimal catalytic region displaying high mobility relative to domains engaging damage. We propose that the organization of PARP1 domains on a DNA break releases a tethered, constitutively active catalytic region to modify molecules in a radius surrounding the DNA break site.
59 BASIC BIOLOGICAL SCIENCES↗
Subtle changes in hydrogen bond orientation result in glassification of carbon capture solvents
Water-lean CO 2 capture solvents show promise for more efficient and cost-effective CO 2 capture, although their long-term behavior in operation has yet to be well studied. New observations of extended structure solvent behavior show that some solvent formulations transform into a glass-like phase upon aging at operating temperatures after contact with CO 2 . The glassification of a solvent would be detrimental to a carbon-capture process due to plugging of infrastructure, introducing a critical need to decipher the underlying principles of this phenomenon to prevent it from happening. In this work, we present the first integrated theoretical and experimental study to characterize the nano-structure of metastable and glassy states of an archetypal single-component alkanolguanidine carbon-capture solvent and assess how minute changes in atomic-level interactions convert the solvent between metastable and glass-like states. Small-angle neutron scattering and neutron diffraction coupled with small- and wide-angle X-ray scattering analysis demonstrate that minute structural changes in solution precipitae reversible aggregation of zwitterionic alkylcarbonate clusters in solution. Our findings indicate that our test system, an alkanolguanidine, exhibits a first-order phase transition, similar to a glass transition, at approximately 40 °C—close to the operating absorption temperature for post-combustion CO 2 capture processes. We anticipate that these phenomena are not specific to this system, but are present in other classes of colvents as well. We discuss how molecular-level interactions can have vast implications for solvent-based carbon-capture technologies, concluding that fortunately in this case, glassification of water-lean solvents can be avoided as long as the solvent is run above its glass transition temperature.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system
Abstract The modified nucleosides 2′-deoxy-7-cyano- and 2′-deoxy-7-amido-7-deazaguanosine (dPreQ0 and dADG, respectively) recently discovered in DNA are the products of the bacterial queuosine tRNA modification pathway and the dpd gene cluster, the latter of which encodes proteins that comprise the elaborate Dpd restriction–modification system present in diverse bacteria. Recent genetic studies implicated the dpdA, dpdB and dpdC genes as encoding proteins necessary for DNA modification, with dpdD–dpdK contributing to the restriction phenotype. Here we report the in vitro reconstitution of the Dpd modification machinery from Salmonella enterica serovar Montevideo, the elucidation of the roles of each protein and the X-ray crystal structure of DpdA supported by small-angle X-ray scattering analysis of DpdA and DpdB, the former bound to DNA. While the homology of DpdA with the tRNA-dependent tRNA-guanine transglycosylase enzymes (TGT) in the queuosine pathway suggested a similar transglycosylase activity responsible for the exchange of a guanine base in the DNA for 7-cyano-7-deazaguanine (preQ0), we demonstrate an unexpected ATPase activity in DpdB necessary for insertion of preQ0 into DNA, and identify several catalytically essential active site residues in DpdA involved in the transglycosylation reaction. Further, we identify a modification site for DpdA activity and demonstrate that DpdC functions independently of DpdA/B in converting preQ0-modified DNA to ADG-modified DNA.
59 BASIC BIOLOGICAL SCIENCES↗
Polarization observables 𝑇 and 𝐹 in the 𝛾𝑝→𝜋 0 𝑝 reaction at CLAS
Pion photoproduction in the $\vec{γ}$$\vec{p}$ → π 0 p reaction has been measured in the FROzen Spin Target (FROST) experiment at the Thomas Jefferson National Accelerator Facility. In this experiment, circularly polarized photons with energies up to 3.082 GeV impinged on a transversely polarized frozen-spin target. Final-state protons were detected in the Continuous Electron Beam Accelerator Facility (CEBAF) Large Acceptance Spectrometer. The polarization observables T and F have been extracted for W from 1445 to 2525 MeV, of which the energy range is much broader, and the precision is better than the existing measurements in higher W ranges. The data generally agree with predictions of present partial-wave analyses but also show marked differences for higher W ranges. By incorporating the present data into the databases, the Scattering Analysis Interactive Data (SAID) fits have been improved with relatively small χ 2 and significant changes in the parameters of the (1910)1/2 + and N(2190)7/2 − have been found with the JüBo model.
particle production↗
STUDIES ON PIPELINE POLYETHYLENES IN HYDROGEN GAS ENVIRONMENTS USING IN-SITU AND EX-SITU CHARACTERIZATION METHODS
Polymeric materials are commonplace in the natural gas infrastructure as distribution pipes, coatings, seals, and gaskets. Under the auspices of the U.S. Department of Energy HyBlend program, one of the means to reduce greenhouse gas emissions is with replacing natural gas, either partially or completely, with hydrogen. This approach makes it imperative that we conduct near-term and long-term materials compatibility research in these relevant environments. Insights into the effects of hydrogen and hydrogen gas blends on polymer integrity can be gained through both ex-situ and in-situ analytical methods. Our work represented here highlights a study of the behavior of pipeline polyethylene (PE) materials, including HDPE (Dow 2490 and GDB50) and MDPE (Ineos and legacy Dupont Aldyl A), when exposed to hydrogen by means of in-situ X-ray scattering and ex-situ Raman spectroscopy techniques. Samples were tested in ex-situ hydrogen and argon gas environments and in-situ hydrogen environments to identify differences due to permeation and solubility of these gases. These methods complemented each other because Raman spectroscopy could capture permanent effects after materials were removed from gaseous environments, and in-situ X-ray scattering analysis collected real-time data to elucidate the impact of the gas environment on polymer microstructure. Data collected revealed that the aforementioned polymers did not show significant changes in crystallinity and microstructure under the exposure conditions tested. Our findings from these studies will help establish real-time effects caused by hydrogen gas transport through pipeline polyethylenes by way of its influence on polymer structure and chemistry, which is directly related to pipeline mechanical strength and longevity of service.
Hydrogen materials compatibility, Natural gas pipe↗
Diffraction of radio-frequency waves by plasma turbulence in the edge of a tokamak
The Mie-Lorenz-Debye theory of scattering of radio frequency waves (RF) by filamentary structures in the edge of a tokamak plasma has been established in prior publications. These results have been verified. Theory and computations show that RF can be reflected, refracted, and diffracted by turbulence. Furthermore, the filamentary structures lead to side scattering of waves and excitation of wave modes different from the launched RF. It is important to quantify the overall effect of turbulence on the propagation of RF since efficiency of heating and current drive by RF waves depends upon the wave characteristics. The commonly used RF ranges vary from the low frequency ion-cyclotron (IC) waves, to medium frequency lower-hybrid (LH) waves, to high-frequency electron cyclotron (EC) waves with wavelengths respectively, large, comparable, or smaller than the radial dimensions of the filaments. Currently, we discuss the scattering as well as the forces exerted by different RF in the edge plasma. Also, we present a code for 3D full wave scattering analysis of arbitrary tensor permittivity and plasma density profiles. The study is applicable to ITER-like plasmas, as well as to plasmas in medium sized tokamaks such as TCV, ASDEX-U and DIII-D and high field concepts like SPARC.
70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
Comparison of lunar with terrestrial and meteoritic rocks
Lunar surface samples characteristics correlation with terrestrial igneous rocks /basalts/ and eucrite meteorites based on alpha scattering analysis
Turner, F. J.↗
Low scatter lens design/development
The criteria for the optimum design of optical systems are discussed along with the selection of appropriate materials. The construction details of low scatter lens systems are tabulated. Scattering analysis; total energy diffracted; and computation of delta for a scratch, bubble, and microscopic irregularities are also discussed.
Gallipeau, R. B.↗
Refracting lens system for low-scatter star-tracker: A Concept
''Low Scatter Lens Design/Development'' discusses studies of low-scatter lens system. Two sections cover optical design and scattering analysis for model of lens system which rejects radiation. Result of computations are shown on computer printouts attached to report.
Source record↗
Particle size and velocity measurement by laser anemometry
The use of a forward scattering Laser Anemometer system for the measurement of particle diameters larger than the fringe spacing is investigated. A systematic calibration experiment demonstrates a direct relationship between signal amplitude and particle diameter for transparent particles between 30 microns and 240 microns in diameter. A light scattering analysis confirms these measurements and indicates how the range of particles which can be measured using the peak (mean) signal depends on the optical arrangement and particle properties. On the basis of this work a real time Laser Anemometer signal processor is modified so that the peak of the mean of each signal can be measured. A method of correcting data for the effect of particles which do not go through the center of the measurement volume is derived. Good agreement is found between particle size distributions measured in sprays by using the Laser Anemometer and size distributions measured by collecting the particles on a slide and using an image analysis computer.
Yule, A. J.↗
Radar images of the earth from space
The operational principles and imagery available from microwave SAR radars for earth observations from aircraft, the Shuttle, and Seasat are explored. Using microwave frequencies is noted to offer imagery access in day or night, all-weather conditions. SAR radar functions by obtaining a series of reflected signals over a single path, with data processing combining the echoes into an image corresponding to what may be obtained with a large antenna. A stable, reference signal is added to the incoming signals in order to establish the phase and amplitude of echoes. Because the wavelengths of the images can be precisely controlled, Doppler shifts can be detected, thus allowing point by point scattering analysis in two-dimensions. The Shuttle SIR-A and the Seasat radar feature a ground resolution of 25 m. Applications of the satellite systems to terrain, ice mapping, and for a Venus radar mapper mission are described.
Elachi, C.↗
Nonprincipal plane scattering of flat plates and pattern control of horn antennas
Using the geometrical theory of diffraction, the traditional method of high frequency scattering analysis, the prediction of the radar cross section of a perfectly conducting, flat, rectangular plate is limited to principal planes. Part A of this report predicts the radar cross section in nonprincipal planes using the method of equivalent currents. This technique is based on an asymptotic end-point reduction of the surface radiation integrals for an infinite wedge and enables nonprincipal plane prediction. The predicted radar cross sections for both horizontal and vertical polarizations are compared to moment method results and experimental data from Arizona State University's anechoic chamber. In part B, a variational calculus approach to the pattern control of the horn antenna is outlined. The approach starts with the optimization of the aperture field distribution so that the control of the radiation pattern in a range of directions can be realized. A control functional is thus formulated. Next, a spectral analysis method is introduced to solve for the eigenfunctions from the extremal condition of the formulated functional. Solutions to the optimized aperture field distribution are then obtained.
Balanis, Constantine A.↗
Planar near-field scanning for compact range bistatic radar cross-section measurement
The design, construction, and testing of a low cost, planar scanning system to be used in a compact range environment for bistatic radar cross-section (bistatic RCS) measurement data are discussed. This scanning system is similar to structures used for measuring near-field antenna patterns. A synthetic aperture technique is used for plane wave reception. System testing entailed comparison of measured and theoretical bistatic RCS of a sphere and a right circular cylinder. Bistatic scattering analysis of the ogival target support, target and pedestal interactions, and compact range room was necessary to determine measurement validity.
Tuhela-Reuning, S. R.↗
Effects of Surface Treatments on Secondary Electron Emission from CVD Diamond Films
Secondary electron emission (SEE) properties of polycrystalline diamond films grown by chemical vapor deposition (CVD) were measured. The total secondary yield (sigma) from as-grown samples was observed to be as high as 20 at room temperature and 48 while heating at 700 K in vacuum. Electron-beam-activated, alkali-terminated diamond films have shown stable values of sigma as high as 60 when coated with CsI and similarly high values when coated with other alkali halides. Diamond coated with BaF2 had a stable sigma of 6, but no enhancement of the SEE properties was observed with coatings of Ti or Au. Hydrogen was identified to give rise to this effect in as-grown films. However, electron beam exposure led to a reduction in sigma values as low as 2. Exposure to a molecular hydrogen environment restored sigma to its original value after degradation, and enabled stable secondary emission during electron beam exposure. Atomic hydrogen and hydrogen plasma treatments were performed on diamond/Mo samples in an attempt to increase the near-surface hydrogen concentration which might lead to increased stability in the secondary emission. Raman scattering analysis, scanning electron microscopy, and Auger electron spectroscopy (AES) confirmed that hydrogen plasma and atomic hydrogen treatments improved the quality of the CVD diamond significantly. Elastic recoil detection (ERD) showed that heating as-grown diamond targets to 7OO K, which was correlated with an increase in sigma, removed contaminants from the surface but did not drive hydrogen from the diamond bulk. ERD showed that the hydrogen plasma treatment produced an increase in the hydrogen concentration in the near-surface region which did not decrease while heating in vacuum at 700 K, but no improvement in the SEE properties was observed.
Mearini, G. T.↗
Structural Fluctuations and Thermophysical Properties of Molten II-VI Compounds
The objectives of the project are to conduct ground-based experimental and theoretical research on the structural fluctuations and thermophysical properties of molten II-VI compounds to enhance the basic understanding of the existing flight experiments in microgravity materials science programs as well as to study the fundamental heterophase fluctuation phenomena in these melts by: 1) conducting neutron scattering analysis and measuring quantitatively the relevant thermophysical properties of the II-VI melts (such as viscosity, electrical conductivity, thermal diffusivity and density) as well as the relaxation characteristics of these properties to advance the understanding of the structural properties and the relaxation phenomena in these melts and 2) performing theoretical analyses on the melt systems to interpret the experimental results. All the facilities required for the experimental measurements have been procured, installed and tested. It has long been recognized that liquid Te presents a unique case having properties between those of metals and semiconductors. The electrical conductivity for Te melt increases rapidly at melting point, indicating a semiconductor-metal transition. Te melts comprise two features, which are usually considered to be incompatible with each other: covalently bound atoms and metallic-like behavior. Why do Te liquids show metallic behavior? is one of the long-standing issues in liquid metal physics. Since thermophysical properties are very sensitive to the structural variations of a melt, we have conducted extensive thermophysical measurements on Te melt.
Su, Ching-Hua↗
Technological Innovations from NASA
The challenge of human space exploration places demands on technology that push concepts and development to the leading edge. In biotechnology and biomedical equipment development, NASA science has been the seed for numerous innovations, many of which are in the commercial arena. The biotechnology effort has led to rational drug design, analytical equipment, and cell culture and tissue engineering strategies. Biomedical research and development has resulted in medical devices that enable diagnosis and treatment advances. NASA Biomedical developments are exemplified in the new laser light scattering analysis for cataracts, the axial flow left ventricular-assist device, non contact electrocardiography, and the guidance system for LASIK surgery. Many more developments are in progress. NASA will continue to advance technologies, incorporating new approaches from basic and applied research, nanotechnology, computational modeling, and database analyses.
Pellis, Neal R.↗